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- RESI CMP -2.00 ! cytosine monophosphate, adm jr.
- ! atom names correspond to pdb nomenclature
- GROUP
- ATOM C4' CN7 0.16 ! H42 H41
- ATOM H4' HN7 0.09 ! \ /
- ATOM O4' ON6B -0.50 ! N4
- ATOM C1' CN7B 0.16 ! |
- ATOM H1' HN7 0.09 ! C4
- GROUP ! / \\
- ATOM N1 NN2 -0.13 ! H5-C5 N3
- ATOM C6 CN3 0.05 ! || |
- ATOM H6 HN3 0.17 ! H6-C6 C2
- ATOM C5 CN3 -0.13 ! \ / \\
- ATOM H5 HN3 0.07 ! N1 O2
- ATOM C2 CN1 0.52 ! \
- ATOM O2 ON1C -0.49 ! \
- ATOM N3 NN3 -0.66 ! O1A H5' H4' O4' \
- ATOM C4 CN2 0.65 ! | | \ / \ \
- ATOM N4 NN1 -0.75 ! O3A--PA-O5'-C5'---C4' C1'
- ATOM H41 HN1 0.37 ! | | \ / \
- ATOM H42 HN1 0.33 ! O2A H5'' C3'--C2' H1'
- GROUP ! / \ / \
- ATOM C2' CN7B 0.14 ! O3' H3' O2' H2''
- ATOM H2'' HN7 0.09 ! | |
- ATOM O2' ON5 -0.66 ! H3T H2'
- ATOM H2' HN5 0.43
- GROUP
- ATOM C3' CN7 0.14
- ATOM H3' HN7 0.09
- ATOM O3' ON5 -0.66
- ATOM H3T HN5 0.43
- GROUP
- ATOM C5' CN8B -0.18
- ATOM H5' HN8 0.09
- ATOM H5'' HN8 0.09
- GROUP
- ATOM O5' ON2 -0.40
- ATOM PA P 1.10
- ATOM O1A ON3 -0.90
- ATOM O2A ON3 -0.90
- ATOM O3A ON3 -0.90
- BOND N1 C2 C2 N3 N3 C4 C4 C5
- BOND C5 C6 N1 C6
- BOND C4 N4 N4 H41 N4 H42
- BOND C2 O2 C5 H5 C6 H6
- BOND C1' N1 C1' C2'
- BOND PA O1A PA O2A PA O3A PA O5' O3' H3T
- BOND O5' C5' C5' C4' C4' O4' C4' C3' O4' C1'
- BOND C2' C3' C2' O2' O2' H2' C3' O3'
- BOND C1' H1' C2' H2'' C3' H3' C4' H4' C5' H5'
- BOND C5' H5''
- IMPR C2 N1 N3 O2 C4 N3 C5 N4
- IMPR N4 C4 H41 H42
- DONO H2' O2'
- DONO H41 N4
- DONO H42 N4
- ACCE O2 C2
- ACCE N3
- ACCE O1A PA
- ACCE O2A PA
- ACCE O3A PA
- ACCE O2'
- ACCE O3'
- ACCE O4'
- ACCE O5'
- IC C5' O5' PA O1A 1.4355 125.73 29.84 105.66 1.4793
- IC C5' O5' PA O2A 1.4355 125.73 -91.13 105.46 1.4775
- IC O1A O2A *PA O3A 1.4793 113.93 -131.58 113.82 1.4809
- IC PA O5' C5' C4' 1.5817 125.73 -106.56 114.58 1.5485
- IC O5' C5' C4' C3' 1.4355 114.58 82.54 114.21 1.5385
- IC C5' C4' C3' O3' 1.5485 114.21 139.15 113.65 1.4400
- IC H3T O3' C3' C4' 0.9657 102.79 157.45 113.65 1.5385
- IC O4' C3' *C4' C5' 1.4688 105.40 -125.30 114.21 1.5485
- IC C2' C4' *C3' O3' 1.5240 103.66 -122.40 113.65 1.4400
- IC C4' C3' C2' C1' 1.5385 103.66 -33.47 101.88 1.5143
- IC C3' C2' C1' N1 1.5240 101.88 154.47 110.60 1.4866
- IC O4' C1' N1 C2 1.4277 113.60 -151.06 121.54 1.3966
- IC C1' C2 *N1 C6 1.4866 121.54 167.48 119.36 1.3726
- IC C2 N1 C6 C5 1.3966 119.36 7.13 121.63 1.3363
- IC C6 N1 C2 N3 1.3726 119.36 -10.00 119.51 1.3602
- IC N1 N3 *C2 O2 1.3966 119.51 -178.93 121.39 1.2434
- IC N1 C2 N3 C4 1.3966 119.51 8.49 119.33 1.3427
- IC C5 N3 *C4 N4 1.4190 122.04 178.61 118.12 1.3332
- IC N3 C4 N4 H41 1.3427 118.12 -6.92 114.61 0.9924
- IC H41 C4 *N4 H42 0.9924 114.61 -157.30 119.69 0.9937
- IC C6 C4 *C5 H5 1.3363 117.43 176.45 120.96 1.0882
- IC N1 C5 *C6 H6 1.3726 121.63 -178.59 121.78 1.0892
- IC C1' C3' *C2' O2' 1.5143 101.88 -119.06 112.57 1.4272
- IC H2' O2' C2' C3' 0.9654 106.91 171.65 112.57 1.5240
- IC O4' C2' *C1' H1' 1.4277 108.35 -113.18 108.73 1.1143
- IC C1' C3' *C2' H2'' 1.5143 101.88 117.56 108.68 1.1163
- IC C2' C4' *C3' H3' 1.5240 103.66 115.28 107.93 1.1146
- IC C3' O4' *C4' H4' 1.5385 105.40 -113.98 108.05 1.1106
- IC C4' O5' *C5' H5' 1.5485 114.58 -119.26 107.06 1.1096
- IC C4' O5' *C5' H5'' 1.5485 114.58 124.53 111.01 1.1140
- PATC FIRS NONE LAST NONE
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