Not a member of Pastebin yet?
Sign Up,
it unlocks many cool features!
- ### THE INPUT PARAMETERS
- ##PARAMETER NAME: VALUE
- allsnps: YES
- ## qpAdm version: 810
- seed: 1641942531
- left pops:
- Armenia_C
- Anatolia_N
- Caucasus_Eneolithic
- Geoksyur_EN
- right pops:
- Mbuti.DG
- Morocco_Iberomaurusian
- Ganj_Dareh_N
- PPN
- Anatolia_Meso
- Iberia_MN
- Russia_MA1.SG
- Georgia_Kotias.SG
- Kostenki14.SG
- Russia_Karelia_HG
- Serbia_Iron_Gates_HG
- Tyumen_HG
- Onge.DG
- 0 Armenia_C 5
- 1 Anatolia_N 22
- 2 Caucasus_Eneolithic 3
- 3 Geoksyur_EN 21
- 4 Mbuti.DG 5
- 5 Morocco_Iberomaurusian 6
- 6 Ganj_Dareh_N 7
- 7 PPN 8
- 8 Anatolia_Meso 1
- 9 Iberia_MN 4
- 10 Russia_MA1.SG 1
- 11 Georgia_Kotias.SG 1
- 12 Kostenki14.SG 1
- 13 Russia_Karelia_HG 2
- 14 Serbia_Iron_Gates_HG 32
- 15 Tyumen_HG 2
- 16 Onge.DG 2
- jackknife block size: 0.050
- snps: 1150526 indivs: 123
- number of blocks for block jackknife: 552
- ## ncols: 1150526
- coverage: Armenia_C 1033326
- coverage: Anatolia_N 1134099
- coverage: Caucasus_Eneolithic 784983
- coverage: Geoksyur_EN 1018577
- coverage: Mbuti.DG 1150376
- coverage: Morocco_Iberomaurusian 1101342
- coverage: Ganj_Dareh_N 1029695
- coverage: PPN 835499
- coverage: Anatolia_Meso 989345
- coverage: Iberia_MN 967760
- coverage: Russia_MA1.SG 805960
- coverage: Georgia_Kotias.SG 1149097
- coverage: Kostenki14.SG 1048972
- coverage: Russia_Karelia_HG 1010733
- coverage: Serbia_Iron_Gates_HG 1139259
- coverage: Tyumen_HG 807474
- coverage: Onge.DG 1120748
- dof (jackknife): 466.274
- numsnps used: 1150526
- codimension 1
- f4info:
- f4rank: 2 dof: 10 chisq: 108.677 tail: 9.86123842e-19 dofdiff: 12 chisqdiff: -108.677 taildiff: 1
- B:
- scale 1.000 1.000
- Morocco_Iberomaurusian 0.683 0.377
- Ganj_Dareh_N -1.152 -1.319
- PPN 1.395 -0.385
- Anatolia_Meso 2.011 -0.228
- Iberia_MN 1.502 0.302
- Russia_MA1.SG -0.464 0.008
- Georgia_Kotias.SG -0.691 2.871
- Kostenki14.SG 0.383 0.322
- Russia_Karelia_HG -0.151 0.801
- Serbia_Iron_Gates_HG 0.785 0.908
- Tyumen_HG -0.677 -0.065
- Onge.DG -0.154 -0.099
- A:
- scale 542.282 1885.993
- Anatolia_N 1.220 -0.604
- Caucasus_Eneolithic -0.425 1.205
- Geoksyur_EN -1.154 -1.088
- full rank
- f4info:
- f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 10 chisqdiff: 108.677 taildiff: 9.86123842e-19
- B:
- scale 1.000 1.000 1.000
- Morocco_Iberomaurusian 0.698 0.126 0.218
- Ganj_Dareh_N -1.167 -0.282 -1.395
- PPN 1.408 -0.347 -0.171
- Anatolia_Meso 1.990 -0.229 -0.024
- Iberia_MN 1.520 -0.104 0.313
- Russia_MA1.SG -0.456 1.290 0.146
- Georgia_Kotias.SG -0.671 -1.661 2.727
- Kostenki14.SG 0.393 0.794 0.450
- Russia_Karelia_HG -0.097 1.667 1.081
- Serbia_Iron_Gates_HG 0.815 0.634 0.996
- Tyumen_HG -0.624 1.867 0.097
- Onge.DG -0.151 0.071 -0.221
- A:
- scale 538.377 1291.023 1716.832
- Anatolia_N 1.236 -0.805 -0.804
- Caucasus_Eneolithic -0.465 -1.388 0.930
- Geoksyur_EN -1.121 -0.654 -1.220
- best coefficients: 0.364 0.398 0.238
- Jackknife mean: 0.364838693 0.398592987 0.236568320
- std. errors: 0.048 0.117 0.073
- error covariance (* 1000000)
- 2348 -5395 3047
- -5395 13783 -8387
- 3047 -8387 5340
- summ: Armenia_C 3 0.000000 0.365 0.399 0.237 2348 -5395 3047 13783 -8387 5340
- fixed pat wt dof chisq tail prob
- 000 0 10 108.677 9.86124e-19 0.364 0.398 0.238
- 001 1 11 124.442 2.31033e-21 0.249 0.751 -0.000
- 010 1 11 150.196 1.3591e-26 0.510 -0.000 0.490
- 100 1 11 155.200 1.28755e-27 0.000 1.253 -0.253 infeasible
- 011 2 12 1164.069 0 1.000 -0.000 -0.000
- 101 2 12 172.409 1.53417e-30 0.000 1.000 -0.000
- 110 2 12 1076.649 0 0.000 -0.000 1.000
- best pat: 000 9.86124e-19 - -
- best pat: 001 2.31033e-21 chi(nested): 15.765 p-value for nested model: 7.1706e-05
- best pat: 101 1.53417e-30 chi(nested): 47.967 p-value for nested model: 4.33347e-12
- coeffs: 0.364 0.398 0.238
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: Anatolia_N Morocco_Iberomaurusian 0.001376 7.133473
- details: Caucasus_Eneolithic Morocco_Iberomaurusian -0.000683 -2.269092
- details: Geoksyur_EN Morocco_Iberomaurusian -0.001745 -7.945052
- dscore: Morocco_Iberomaurusian f4: -0.000186 Z: -0.965741
- details: Anatolia_N Ganj_Dareh_N -0.001926 -9.614979
- details: Caucasus_Eneolithic Ganj_Dareh_N 0.000486 1.501309
- details: Geoksyur_EN Ganj_Dareh_N 0.003445 14.487010
- dscore: Ganj_Dareh_N f4: 0.000313 Z: 1.515241
- details: Anatolia_N PPN 0.003455 17.004860
- details: Caucasus_Eneolithic PPN -0.001017 -3.145608
- details: Geoksyur_EN PPN -0.002757 -12.078193
- dscore: PPN f4: 0.000197 Z: 0.948479
- details: Anatolia_N Anatolia_Meso 0.004670 17.009689
- details: Caucasus_Eneolithic Anatolia_Meso -0.001520 -3.656749
- details: Geoksyur_EN Anatolia_Meso -0.004112 -14.431270
- dscore: Anatolia_Meso f4: 0.000116 Z: 0.431086
- details: Anatolia_N Iberia_MN 0.003344 16.404286
- details: Caucasus_Eneolithic Iberia_MN -0.001108 -3.395718
- details: Geoksyur_EN Iberia_MN -0.003437 -15.634774
- dscore: Iberia_MN f4: -0.000042 Z: -0.207962
- details: Anatolia_N Russia_MA1.SG -0.002019 -7.552083
- details: Caucasus_Eneolithic Russia_MA1.SG -0.001000 -2.701491
- details: Geoksyur_EN Russia_MA1.SG 0.000075 0.268405
- dscore: Russia_MA1.SG f4: -0.001115 Z: -4.505074
- details: Anatolia_N Georgia_Kotias.SG -0.001867 -6.940442
- details: Caucasus_Eneolithic Georgia_Kotias.SG 0.003788 9.198618
- details: Geoksyur_EN Georgia_Kotias.SG 0.000176 0.611298
- dscore: Georgia_Kotias.SG f4: 0.000869 Z: 3.257061
- details: Anatolia_N Kostenki14.SG 0.000109 0.399098
- details: Caucasus_Eneolithic Kostenki14.SG -0.001016 -2.671709
- details: Geoksyur_EN Kostenki14.SG -0.001653 -6.082885
- dscore: Kostenki14.SG f4: -0.000758 Z: -3.056312
- details: Anatolia_N Russia_Karelia_HG -0.001858 -6.999823
- details: Caucasus_Eneolithic Russia_Karelia_HG -0.001201 -2.962584
- details: Geoksyur_EN Russia_Karelia_HG -0.001548 -5.243024
- dscore: Russia_Karelia_HG f4: -0.001523 Z: -5.812195
- details: Anatolia_N Serbia_Iron_Gates_HG 0.000931 4.469957
- details: Caucasus_Eneolithic Serbia_Iron_Gates_HG -0.000942 -2.902746
- details: Geoksyur_EN Serbia_Iron_Gates_HG -0.002842 -12.968057
- dscore: Serbia_Iron_Gates_HG f4: -0.000713 Z: -3.441747
- details: Anatolia_N Tyumen_HG -0.002723 -10.691204
- details: Caucasus_Eneolithic Tyumen_HG -0.001520 -3.793735
- details: Geoksyur_EN Tyumen_HG 0.000169 0.601856
- dscore: Tyumen_HG f4: -0.001556 Z: -6.092008
- details: Anatolia_N Onge.DG -0.000364 -1.602623
- details: Caucasus_Eneolithic Onge.DG -0.000166 -0.512798
- details: Geoksyur_EN Onge.DG 0.000318 1.300071
- dscore: Onge.DG f4: -0.000123 Z: -0.563060
- gendstat: Mbuti.DG Morocco_Iberomaurusian -0.966
- gendstat: Mbuti.DG Ganj_Dareh_N 1.515
- gendstat: Mbuti.DG PPN 0.948
- gendstat: Mbuti.DG Anatolia_Meso 0.431
- gendstat: Mbuti.DG Iberia_MN -0.208
- gendstat: Mbuti.DG Russia_MA1.SG -4.505
- gendstat: Mbuti.DG Georgia_Kotias.SG 3.257
- gendstat: Mbuti.DG Kostenki14.SG -3.056
- gendstat: Mbuti.DG Russia_Karelia_HG -5.812
- gendstat: Mbuti.DG Serbia_Iron_Gates_HG -3.442
- gendstat: Mbuti.DG Tyumen_HG -6.092
- gendstat: Mbuti.DG Onge.DG -0.563
- gendstat: Morocco_Iberomaurusian Ganj_Dareh_N 2.256
- gendstat: Morocco_Iberomaurusian PPN 1.772
- gendstat: Morocco_Iberomaurusian Anatolia_Meso 1.095
- gendstat: Morocco_Iberomaurusian Iberia_MN 0.694
- gendstat: Morocco_Iberomaurusian Russia_MA1.SG -3.470
- gendstat: Morocco_Iberomaurusian Georgia_Kotias.SG 3.643
- gendstat: Morocco_Iberomaurusian Kostenki14.SG -2.188
- gendstat: Morocco_Iberomaurusian Russia_Karelia_HG -4.965
- gendstat: Morocco_Iberomaurusian Serbia_Iron_Gates_HG -2.461
- gendstat: Morocco_Iberomaurusian Tyumen_HG -4.913
- gendstat: Morocco_Iberomaurusian Onge.DG 0.273
- gendstat: Ganj_Dareh_N PPN -0.494
- gendstat: Ganj_Dareh_N Anatolia_Meso -0.685
- gendstat: Ganj_Dareh_N Iberia_MN -1.574
- gendstat: Ganj_Dareh_N Russia_MA1.SG -5.375
- gendstat: Ganj_Dareh_N Georgia_Kotias.SG 2.145
- gendstat: Ganj_Dareh_N Kostenki14.SG -4.110
- gendstat: Ganj_Dareh_N Russia_Karelia_HG -6.938
- gendstat: Ganj_Dareh_N Serbia_Iron_Gates_HG -4.766
- gendstat: Ganj_Dareh_N Tyumen_HG -7.030
- gendstat: Ganj_Dareh_N Onge.DG -1.872
- gendstat: PPN Anatolia_Meso -0.309
- gendstat: PPN Iberia_MN -1.245
- gendstat: PPN Russia_MA1.SG -4.761
- gendstat: PPN Georgia_Kotias.SG 2.337
- gendstat: PPN Kostenki14.SG -3.536
- gendstat: PPN Russia_Karelia_HG -6.215
- gendstat: PPN Serbia_Iron_Gates_HG -4.374
- gendstat: PPN Tyumen_HG -6.072
- gendstat: PPN Onge.DG -1.262
- gendstat: Anatolia_Meso Iberia_MN -0.599
- gendstat: Anatolia_Meso Russia_MA1.SG -3.815
- gendstat: Anatolia_Meso Georgia_Kotias.SG 2.280
- gendstat: Anatolia_Meso Kostenki14.SG -2.728
- gendstat: Anatolia_Meso Russia_Karelia_HG -5.078
- gendstat: Anatolia_Meso Serbia_Iron_Gates_HG -3.114
- gendstat: Anatolia_Meso Tyumen_HG -5.085
- gendstat: Anatolia_Meso Onge.DG -0.801
- gendstat: Iberia_MN Russia_MA1.SG -4.113
- gendstat: Iberia_MN Georgia_Kotias.SG 3.382
- gendstat: Iberia_MN Kostenki14.SG -2.810
- gendstat: Iberia_MN Russia_Karelia_HG -5.502
- gendstat: Iberia_MN Serbia_Iron_Gates_HG -3.772
- gendstat: Iberia_MN Tyumen_HG -5.566
- gendstat: Iberia_MN Onge.DG -0.346
- gendstat: Russia_MA1.SG Georgia_Kotias.SG 6.267
- gendstat: Russia_MA1.SG Kostenki14.SG 1.243
- gendstat: Russia_MA1.SG Russia_Karelia_HG -1.548
- gendstat: Russia_MA1.SG Serbia_Iron_Gates_HG 1.728
- gendstat: Russia_MA1.SG Tyumen_HG -1.607
- gendstat: Russia_MA1.SG Onge.DG 3.781
- gendstat: Georgia_Kotias.SG Kostenki14.SG -5.232
- gendstat: Georgia_Kotias.SG Russia_Karelia_HG -7.496
- gendstat: Georgia_Kotias.SG Serbia_Iron_Gates_HG -5.810
- gendstat: Georgia_Kotias.SG Tyumen_HG -7.883
- gendstat: Georgia_Kotias.SG Onge.DG -3.450
- gendstat: Kostenki14.SG Russia_Karelia_HG -2.566
- gendstat: Kostenki14.SG Serbia_Iron_Gates_HG 0.195
- gendstat: Kostenki14.SG Tyumen_HG -2.759
- gendstat: Kostenki14.SG Onge.DG 2.400
- gendstat: Russia_Karelia_HG Serbia_Iron_Gates_HG 3.618
- gendstat: Russia_Karelia_HG Tyumen_HG -0.125
- gendstat: Russia_Karelia_HG Onge.DG 5.206
- gendstat: Serbia_Iron_Gates_HG Tyumen_HG -3.593
- gendstat: Serbia_Iron_Gates_HG Onge.DG 2.693
- gendstat: Tyumen_HG Onge.DG 5.223
- ## end of run
Add Comment
Please, Sign In to add comment