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Light1992

Part of my gff3

Light1992
Jan 20th, 2021
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  1. ##gff-version 3
  2. tig00000002 AUGUSTUS gene 1085 4417 0.06 - . ID=tig00000002.g1;seqName=tig00000002.g1;HintSupport=0
  3. tig00000002 AUGUSTUS mRNA 1085 4417 0.06 - . ID=tig00000002.g1.t1;Parent=tig00000002.g1;seqName=tig00000002.g1;HintSupport=0;Description=Protein SIEVE ELEMENT OCCLUSION B; Short=AtSEOb; AltName: Full=Protein SIEVE ELEMENT OCCLUSION-RELATED 1; Short=AtSEOR1;Tags=[BLASTED,MAPPED,ANNOTATED];GO_terms=P:phloem development,F:protein homodimerization activity,F:protein self-association;GO_IDS=P:GO:0010088,F:GO:0042803,F:GO:0043621;Enzyme_Codes=;Enzyme_Names=
  4. tig00000002 AUGUSTUS transcription_end_site 1085 1085 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  5. tig00000002 AUGUSTUS exon 1085 1418 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  6. tig00000002 AUGUSTUS stop_codon 1215 1217 . - 0 Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  7. tig00000002 AUGUSTUS intron 1419 1638 0.7 - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  8. tig00000002 AUGUSTUS intron 1783 2019 0.83 - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  9. tig00000002 AUGUSTUS intron 2274 2370 0.75 - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  10. tig00000002 AUGUSTUS intron 2497 2950 0.84 - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  11. tig00000002 AUGUSTUS intron 3061 3156 0.99 - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  12. tig00000002 AUGUSTUS intron 3336 4183 0.77 - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  13. tig00000002 AUGUSTUS CDS 1215 1418 0.71 - 0 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  14. tig00000002 AUGUSTUS CDS 1639 1782 0.84 - 0 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  15. tig00000002 AUGUSTUS exon 1639 1782 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  16. tig00000002 AUGUSTUS CDS 2020 2273 0.74 - 2 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  17. tig00000002 AUGUSTUS exon 2020 2273 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  18. tig00000002 AUGUSTUS CDS 2371 2496 0.83 - 2 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  19. tig00000002 AUGUSTUS exon 2371 2496 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  20. tig00000002 AUGUSTUS CDS 2951 3060 1.0 - 1 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  21. tig00000002 AUGUSTUS exon 2951 3060 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  22. tig00000002 AUGUSTUS CDS 3157 3335 0.95 - 0 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  23. tig00000002 AUGUSTUS exon 3157 3335 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  24. tig00000002 AUGUSTUS CDS 4184 4354 0.82 - 0 ID=tig00000002.g1.t1.cds;Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  25. tig00000002 AUGUSTUS exon 4184 4417 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  26. tig00000002 AUGUSTUS start_codon 4352 4354 . - 0 Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  27. tig00000002 AUGUSTUS transcription_start_site 4417 4417 . - . Parent=tig00000002.g1.t1;seqName=tig00000002.g1;HintSupport=0
  28. tig00000002 AUGUSTUS gene 72583 77087 0.01 - . ID=tig00000002.g2;seqName=tig00000002.g2;HintSupport=0
  29. tig00000002 AUGUSTUS mRNA 72583 77087 0.01 - . ID=tig00000002.g2.t1;Parent=tig00000002.g2;seqName=tig00000002.g2;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  30. tig00000002 AUGUSTUS transcription_end_site 72583 72583 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  31. tig00000002 AUGUSTUS exon 72583 73422 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  32. tig00000002 AUGUSTUS stop_codon 72782 72784 . - 0 Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  33. tig00000002 AUGUSTUS intron 73423 73906 0.54 - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  34. tig00000002 AUGUSTUS intron 74202 74665 0.18 - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  35. tig00000002 AUGUSTUS intron 74846 75277 0.29 - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  36. tig00000002 AUGUSTUS intron 75957 76391 0.4 - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  37. tig00000002 AUGUSTUS CDS 72782 73422 0.6 - 2 ID=tig00000002.g2.t1.cds;Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  38. tig00000002 AUGUSTUS CDS 73907 74201 0.35 - 0 ID=tig00000002.g2.t1.cds;Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  39. tig00000002 AUGUSTUS exon 73907 74201 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  40. tig00000002 AUGUSTUS CDS 74666 74845 0.21 - 0 ID=tig00000002.g2.t1.cds;Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  41. tig00000002 AUGUSTUS exon 74666 74845 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  42. tig00000002 AUGUSTUS CDS 75278 75956 0.25 - 1 ID=tig00000002.g2.t1.cds;Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  43. tig00000002 AUGUSTUS exon 75278 75956 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  44. tig00000002 AUGUSTUS CDS 76392 77020 0.84 - 0 ID=tig00000002.g2.t1.cds;Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  45. tig00000002 AUGUSTUS exon 76392 77087 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  46. tig00000002 AUGUSTUS start_codon 77018 77020 . - 0 Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  47. tig00000002 AUGUSTUS transcription_start_site 77087 77087 . - . Parent=tig00000002.g2.t1;seqName=tig00000002.g2;HintSupport=0
  48. tig00000002 AUGUSTUS gene 84369 88037 0.23 - . ID=tig00000002.g3;seqName=tig00000002.g3;HintSupport=40
  49. tig00000002 AUGUSTUS mRNA 84369 88037 0.23 - . ID=tig00000002.g3.t1;Parent=tig00000002.g3;seqName=tig00000002.g3;HintSupport=40;Description=Protein SIEVE ELEMENT OCCLUSION B; Short=AtSEOb; AltName: Full=Protein SIEVE ELEMENT OCCLUSION-RELATED 1; Short=AtSEOR1;Tags=[BLASTED,MAPPED,ANNOTATED];GO_terms=P:phloem development,F:protein homodimerization activity,F:protein self-association;GO_IDS=P:GO:0010088,F:GO:0042803,F:GO:0043621;Enzyme_Codes=;Enzyme_Names=
  50. tig00000002 AUGUSTUS transcription_end_site 84369 84369 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  51. tig00000002 AUGUSTUS exon 84369 85076 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  52. tig00000002 AUGUSTUS stop_codon 84447 84449 . - 0 Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  53. tig00000002 AUGUSTUS intron 85077 85407 1.0 - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  54. tig00000002 AUGUSTUS intron 85885 85974 1.0 - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  55. tig00000002 AUGUSTUS intron 86118 86361 1.0 - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  56. tig00000002 AUGUSTUS intron 86472 86567 1.0 - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  57. tig00000002 AUGUSTUS intron 87017 87263 1.0 - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  58. tig00000002 AUGUSTUS intron 87381 87516 1.0 - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  59. tig00000002 AUGUSTUS CDS 84447 85076 0.96 - 0 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  60. tig00000002 AUGUSTUS CDS 85408 85884 1.0 - 0 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  61. tig00000002 AUGUSTUS exon 85408 85884 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  62. tig00000002 AUGUSTUS CDS 85975 86117 1.0 - 2 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  63. tig00000002 AUGUSTUS exon 85975 86117 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  64. tig00000002 AUGUSTUS CDS 86362 86471 1.0 - 1 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  65. tig00000002 AUGUSTUS exon 86362 86471 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  66. tig00000002 AUGUSTUS CDS 86568 87016 1.0 - 0 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  67. tig00000002 AUGUSTUS exon 86568 87016 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  68. tig00000002 AUGUSTUS CDS 87264 87380 1.0 - 0 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  69. tig00000002 AUGUSTUS exon 87264 87380 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  70. tig00000002 AUGUSTUS CDS 87517 87894 0.98 - 0 ID=tig00000002.g3.t1.cds;Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  71. tig00000002 AUGUSTUS exon 87517 88037 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  72. tig00000002 AUGUSTUS start_codon 87892 87894 . - 0 Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  73. tig00000002 AUGUSTUS transcription_start_site 88037 88037 . - . Parent=tig00000002.g3.t1;seqName=tig00000002.g3;HintSupport=40
  74. tig00000002 AUGUSTUS gene 93196 100462 0.01 + . ID=tig00000002.g4;seqName=tig00000002.g4;HintSupport=0
  75. tig00000002 AUGUSTUS mRNA 93196 100462 0.01 + . ID=tig00000002.g4.t1;Parent=tig00000002.g4;seqName=tig00000002.g4;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=EC:5.2.1.8;Enzyme_Names=Peptidylprolyl isomerase
  76. tig00000002 AUGUSTUS transcription_start_site 93196 93196 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  77. tig00000002 AUGUSTUS exon 93196 93540 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  78. tig00000002 AUGUSTUS start_codon 93259 93261 . + 0 Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  79. tig00000002 AUGUSTUS intron 93541 93665 0.76 + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  80. tig00000002 AUGUSTUS intron 93949 95199 0.37 + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  81. tig00000002 AUGUSTUS intron 95352 97482 0.64 + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  82. tig00000002 AUGUSTUS intron 97712 99317 0.13 + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  83. tig00000002 AUGUSTUS intron 99422 99781 0.32 + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  84. tig00000002 AUGUSTUS intron 99900 100014 0.7 + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  85. tig00000002 AUGUSTUS CDS 93259 93540 0.75 + 0 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  86. tig00000002 AUGUSTUS CDS 93666 93948 0.42 + 0 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  87. tig00000002 AUGUSTUS exon 93666 93948 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  88. tig00000002 AUGUSTUS CDS 95200 95351 0.44 + 2 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  89. tig00000002 AUGUSTUS exon 95200 95351 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  90. tig00000002 AUGUSTUS CDS 97483 97711 0.48 + 0 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  91. tig00000002 AUGUSTUS exon 97483 97711 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  92. tig00000002 AUGUSTUS CDS 99318 99421 0.26 + 2 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  93. tig00000002 AUGUSTUS exon 99318 99421 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  94. tig00000002 AUGUSTUS CDS 99782 99899 0.33 + 0 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  95. tig00000002 AUGUSTUS exon 99782 99899 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  96. tig00000002 AUGUSTUS CDS 100015 100382 0.4 + 2 ID=tig00000002.g4.t1.cds;Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  97. tig00000002 AUGUSTUS exon 100015 100462 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  98. tig00000002 AUGUSTUS stop_codon 100380 100382 . + 0 Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  99. tig00000002 AUGUSTUS transcription_end_site 100462 100462 . + . Parent=tig00000002.g4.t1;seqName=tig00000002.g4;HintSupport=0
  100. tig00000002 AUGUSTUS gene 117566 121367 0.23 - . ID=tig00000002.g5;seqName=tig00000002.g5;HintSupport=31.6
  101. tig00000002 AUGUSTUS mRNA 117566 121367 0.23 - . ID=tig00000002.g5.t1;Parent=tig00000002.g5;seqName=tig00000002.g5;HintSupport=31.6;Description=Protein SIEVE ELEMENT OCCLUSION B; Short=AtSEOb; AltName: Full=Protein SIEVE ELEMENT OCCLUSION-RELATED 1; Short=AtSEOR1;Tags=[BLASTED,MAPPED,ANNOTATED];GO_terms=P:phloem development,F:protein binding,F:protein homodimerization activity,F:protein self-association;GO_IDS=P:GO:0010088,F:GO:0005515,F:GO:0042803,F:GO:0043621;Enzyme_Codes=;Enzyme_Names=
  102. tig00000002 AUGUSTUS transcription_end_site 117566 117566 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  103. tig00000002 AUGUSTUS exon 117566 118273 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  104. tig00000002 AUGUSTUS stop_codon 117644 117646 . - 0 Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  105. tig00000002 AUGUSTUS intron 118274 118587 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  106. tig00000002 AUGUSTUS intron 118670 118801 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  107. tig00000002 AUGUSTUS intron 119062 119151 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  108. tig00000002 AUGUSTUS intron 119295 119574 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  109. tig00000002 AUGUSTUS intron 119685 119785 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  110. tig00000002 AUGUSTUS intron 120235 120481 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  111. tig00000002 AUGUSTUS intron 120599 120734 1.0 - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  112. tig00000002 AUGUSTUS CDS 117644 118273 0.99 - 0 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  113. tig00000002 AUGUSTUS CDS 118588 118669 1.0 - 1 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  114. tig00000002 AUGUSTUS exon 118588 118669 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  115. tig00000002 AUGUSTUS CDS 118802 119061 1.0 - 0 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  116. tig00000002 AUGUSTUS exon 118802 119061 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  117. tig00000002 AUGUSTUS CDS 119152 119294 1.0 - 2 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  118. tig00000002 AUGUSTUS exon 119152 119294 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  119. tig00000002 AUGUSTUS CDS 119575 119684 1.0 - 1 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  120. tig00000002 AUGUSTUS exon 119575 119684 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  121. tig00000002 AUGUSTUS CDS 119786 120234 1.0 - 0 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  122. tig00000002 AUGUSTUS exon 119786 120234 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  123. tig00000002 AUGUSTUS CDS 120482 120598 1.0 - 0 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  124. tig00000002 AUGUSTUS exon 120482 120598 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  125. tig00000002 AUGUSTUS CDS 120735 121115 0.98 - 0 ID=tig00000002.g5.t1.cds;Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  126. tig00000002 AUGUSTUS exon 120735 121117 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  127. tig00000002 AUGUSTUS start_codon 121113 121115 . - 0 Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  128. tig00000002 AUGUSTUS exon 121240 121367 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  129. tig00000002 AUGUSTUS transcription_start_site 121367 121367 . - . Parent=tig00000002.g5.t1;seqName=tig00000002.g5;HintSupport=31.6
  130. tig00000002 AUGUSTUS gene 124323 124867 0.3 - . ID=tig00000002.g6;seqName=tig00000002.g6;HintSupport=0
  131. tig00000002 AUGUSTUS mRNA 124323 124867 0.3 - . ID=tig00000002.g6.t1;Parent=tig00000002.g6;seqName=tig00000002.g6;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  132. tig00000002 AUGUSTUS transcription_end_site 124323 124323 . - . Parent=tig00000002.g6.t1;seqName=tig00000002.g6;HintSupport=0
  133. tig00000002 AUGUSTUS exon 124323 124867 . - . Parent=tig00000002.g6.t1;seqName=tig00000002.g6;HintSupport=0
  134. tig00000002 AUGUSTUS stop_codon 124557 124559 . - 0 Parent=tig00000002.g6.t1;seqName=tig00000002.g6;HintSupport=0
  135. tig00000002 AUGUSTUS CDS 124557 124796 0.84 - 0 ID=tig00000002.g6.t1.cds;Parent=tig00000002.g6.t1;seqName=tig00000002.g6;HintSupport=0
  136. tig00000002 AUGUSTUS start_codon 124794 124796 . - 0 Parent=tig00000002.g6.t1;seqName=tig00000002.g6;HintSupport=0
  137. tig00000002 AUGUSTUS transcription_start_site 124867 124867 . - . Parent=tig00000002.g6.t1;seqName=tig00000002.g6;HintSupport=0
  138. tig00000002 AUGUSTUS gene 134756 136638 0.13 + . ID=tig00000002.g7;seqName=tig00000002.g7;HintSupport=20
  139. tig00000002 AUGUSTUS mRNA 134756 136638 0.13 + . ID=tig00000002.g7.t1;Parent=tig00000002.g7;seqName=tig00000002.g7;HintSupport=20;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  140. tig00000002 AUGUSTUS transcription_start_site 134756 134756 . + . Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  141. tig00000002 AUGUSTUS exon 134756 135015 . + . Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  142. tig00000002 AUGUSTUS start_codon 134892 134894 . + 0 Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  143. tig00000002 AUGUSTUS intron 135016 136272 1.0 + . Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  144. tig00000002 AUGUSTUS CDS 134892 135015 0.89 + 0 ID=tig00000002.g7.t1.cds;Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  145. tig00000002 AUGUSTUS CDS 136273 136460 1.0 + 2 ID=tig00000002.g7.t1.cds;Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  146. tig00000002 AUGUSTUS exon 136273 136638 . + . Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  147. tig00000002 AUGUSTUS stop_codon 136458 136460 . + 0 Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  148. tig00000002 AUGUSTUS transcription_end_site 136638 136638 . + . Parent=tig00000002.g7.t1;seqName=tig00000002.g7;HintSupport=20
  149. tig00000002 AUGUSTUS gene 138166 146259 0.01 + . ID=tig00000002.g8;seqName=tig00000002.g8;HintSupport=0
  150. tig00000002 AUGUSTUS mRNA 138166 146259 0.01 + . ID=tig00000002.g8.t1;Parent=tig00000002.g8;seqName=tig00000002.g8;HintSupport=0;Description=Retrovirus-related Pol polyprotein from transposon RE1; AltName: Full=Retro element 1; Short=AtRE1; Includes: RecName: Full=Protease RE1; Includes: RecName: Full=Reverse transcriptase RE1; Includes: RecName: Full=Endonuclease RE1;Tags=[BLASTED,MAPPED,ANNOTATED];GO_terms=P:DNA metabolic process,F:binding,F:transferase activity,F:hydrolase activity;GO_IDS=P:GO:0006259,F:GO:0005488,F:GO:0016740,F:GO:0016787;Enzyme_Codes=;Enzyme_Names=
  151. tig00000002 AUGUSTUS transcription_start_site 138166 138166 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  152. tig00000002 AUGUSTUS exon 138166 138680 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  153. tig00000002 AUGUSTUS start_codon 138222 138224 . + 0 Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  154. tig00000002 AUGUSTUS intron 138681 138792 1.0 + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  155. tig00000002 AUGUSTUS intron 139378 139453 0.57 + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  156. tig00000002 AUGUSTUS intron 139610 139939 0.55 + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  157. tig00000002 AUGUSTUS intron 140254 145574 0.14 + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  158. tig00000002 AUGUSTUS CDS 138222 138680 0.7 + 0 ID=tig00000002.g8.t1.cds;Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  159. tig00000002 AUGUSTUS CDS 138793 139377 0.97 + 0 ID=tig00000002.g8.t1.cds;Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  160. tig00000002 AUGUSTUS exon 138793 139377 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  161. tig00000002 AUGUSTUS CDS 139454 139609 0.55 + 0 ID=tig00000002.g8.t1.cds;Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  162. tig00000002 AUGUSTUS exon 139454 139609 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  163. tig00000002 AUGUSTUS CDS 139940 140253 0.52 + 0 ID=tig00000002.g8.t1.cds;Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  164. tig00000002 AUGUSTUS exon 139940 140253 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  165. tig00000002 AUGUSTUS CDS 145575 146151 0.19 + 1 ID=tig00000002.g8.t1.cds;Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  166. tig00000002 AUGUSTUS exon 145575 146259 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  167. tig00000002 AUGUSTUS stop_codon 146149 146151 . + 0 Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  168. tig00000002 AUGUSTUS transcription_end_site 146259 146259 . + . Parent=tig00000002.g8.t1;seqName=tig00000002.g8;HintSupport=0
  169. tig00000002 AUGUSTUS gene 168446 172071 0.14 + . ID=tig00000002.g9;seqName=tig00000002.g9;HintSupport=0
  170. tig00000002 AUGUSTUS mRNA 168446 172071 0.14 + . ID=tig00000002.g9.t1;Parent=tig00000002.g9;seqName=tig00000002.g9;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  171. tig00000002 AUGUSTUS transcription_start_site 168446 168446 . + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  172. tig00000002 AUGUSTUS exon 168446 168908 . + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  173. tig00000002 AUGUSTUS start_codon 168706 168708 . + 0 Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  174. tig00000002 AUGUSTUS intron 168909 169133 0.85 + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  175. tig00000002 AUGUSTUS intron 169296 171788 0.48 + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  176. tig00000002 AUGUSTUS CDS 168706 168908 0.76 + 0 ID=tig00000002.g9.t1.cds;Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  177. tig00000002 AUGUSTUS CDS 169134 169295 0.81 + 1 ID=tig00000002.g9.t1.cds;Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  178. tig00000002 AUGUSTUS exon 169134 169295 . + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  179. tig00000002 AUGUSTUS CDS 171789 172023 0.55 + 1 ID=tig00000002.g9.t1.cds;Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  180. tig00000002 AUGUSTUS exon 171789 172071 . + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  181. tig00000002 AUGUSTUS stop_codon 172021 172023 . + 0 Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  182. tig00000002 AUGUSTUS transcription_end_site 172071 172071 . + . Parent=tig00000002.g9.t1;seqName=tig00000002.g9;HintSupport=0
  183. tig00000002 AUGUSTUS gene 186515 191600 0.29 - . ID=tig00000002.g10;seqName=tig00000002.g10;HintSupport=44.4
  184. tig00000002 AUGUSTUS mRNA 186515 191600 0.29 - . ID=tig00000002.g10.t1;Parent=tig00000002.g10;seqName=tig00000002.g10;HintSupport=44.4;Description=E3 ubiquitin-protein ligase RGLG5; AltName: Full=RING domain ligase 5;Tags=[BLASTED,MAPPED,ANNOTATED];GO_terms=P:response to wounding,P:cytokinin metabolic process,P:positive regulation of abscisic acid-activated signaling pathway,P:auxin metabolic process,P:jasmonic acid mediated signaling pathway,P:defense response to bacterium,P:protein K63-linked ubiquitination,P:negative regulation of response to water deprivation,P:positive regulation of cellular response to alcohol,F:protein binding,F:metal ion binding,F:ubiquitin protein ligase activity,C:nucleus,C:cytoplasm,C:plasma membrane;GO_IDS=P:GO:0009611,P:GO:0009690,P:GO:0009789,P:GO:0009850,P:GO:0009867,P:GO:0042742,P:GO:0070534,P:GO:0080148,P:GO:1905959,F:GO:0005515,F:GO:0046872,F:GO:0061630,C:GO:0005634,C:GO:0005737,C:GO:0005886;Enzyme_Codes=EC:2.3.2.27;Enzyme_Names=RING-type E3 ubiquitin transferase
  185. tig00000002 AUGUSTUS transcription_end_site 186515 186515 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  186. tig00000002 AUGUSTUS exon 186515 186789 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  187. tig00000002 AUGUSTUS exon 186885 187048 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  188. tig00000002 AUGUSTUS stop_codon 186965 186967 . - 0 Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  189. tig00000002 AUGUSTUS intron 187049 187160 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  190. tig00000002 AUGUSTUS intron 187218 187554 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  191. tig00000002 AUGUSTUS intron 187739 187824 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  192. tig00000002 AUGUSTUS intron 187953 188048 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  193. tig00000002 AUGUSTUS intron 188155 188219 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  194. tig00000002 AUGUSTUS intron 188300 188536 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  195. tig00000002 AUGUSTUS intron 188635 188854 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  196. tig00000002 AUGUSTUS intron 188969 189063 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  197. tig00000002 AUGUSTUS intron 189205 189276 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  198. tig00000002 AUGUSTUS intron 189362 190899 1.0 - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  199. tig00000002 AUGUSTUS CDS 186965 187048 1.0 - 0 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  200. tig00000002 AUGUSTUS CDS 187161 187217 1.0 - 0 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  201. tig00000002 AUGUSTUS exon 187161 187217 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  202. tig00000002 AUGUSTUS CDS 187555 187738 1.0 - 1 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  203. tig00000002 AUGUSTUS exon 187555 187738 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  204. tig00000002 AUGUSTUS CDS 187825 187952 1.0 - 0 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  205. tig00000002 AUGUSTUS exon 187825 187952 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  206. tig00000002 AUGUSTUS CDS 188049 188154 1.0 - 1 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  207. tig00000002 AUGUSTUS exon 188049 188154 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  208. tig00000002 AUGUSTUS CDS 188220 188299 1.0 - 0 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  209. tig00000002 AUGUSTUS exon 188220 188299 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  210. tig00000002 AUGUSTUS CDS 188537 188634 1.0 - 2 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  211. tig00000002 AUGUSTUS exon 188537 188634 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  212. tig00000002 AUGUSTUS CDS 188855 188968 1.0 - 2 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  213. tig00000002 AUGUSTUS exon 188855 188968 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  214. tig00000002 AUGUSTUS CDS 189064 189204 1.0 - 2 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  215. tig00000002 AUGUSTUS exon 189064 189204 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  216. tig00000002 AUGUSTUS CDS 189277 189361 1.0 - 0 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  217. tig00000002 AUGUSTUS exon 189277 189361 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  218. tig00000002 AUGUSTUS CDS 190900 191130 1.0 - 0 ID=tig00000002.g10.t1.cds;Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  219. tig00000002 AUGUSTUS exon 190900 191236 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  220. tig00000002 AUGUSTUS start_codon 191128 191130 . - 0 Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  221. tig00000002 AUGUSTUS exon 191491 191600 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  222. tig00000002 AUGUSTUS transcription_start_site 191600 191600 . - . Parent=tig00000002.g10.t1;seqName=tig00000002.g10;HintSupport=44.4
  223. tig00000002 AUGUSTUS gene 209629 212101 0.04 + . ID=tig00000002.g11;seqName=tig00000002.g11;HintSupport=0
  224. tig00000002 AUGUSTUS mRNA 209629 212101 0.04 + . ID=tig00000002.g11.t1;Parent=tig00000002.g11;seqName=tig00000002.g11;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  225. tig00000002 AUGUSTUS transcription_start_site 209629 209629 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  226. tig00000002 AUGUSTUS exon 209629 210449 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  227. tig00000002 AUGUSTUS start_codon 209939 209941 . + 0 Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  228. tig00000002 AUGUSTUS intron 210450 210527 0.86 + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  229. tig00000002 AUGUSTUS intron 210672 210742 0.5 + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  230. tig00000002 AUGUSTUS intron 210784 210857 0.47 + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  231. tig00000002 AUGUSTUS intron 211067 211695 0.41 + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  232. tig00000002 AUGUSTUS CDS 209939 210449 0.63 + 0 ID=tig00000002.g11.t1.cds;Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  233. tig00000002 AUGUSTUS CDS 210528 210671 0.86 + 2 ID=tig00000002.g11.t1.cds;Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  234. tig00000002 AUGUSTUS exon 210528 210671 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  235. tig00000002 AUGUSTUS CDS 210743 210783 0.5 + 2 ID=tig00000002.g11.t1.cds;Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  236. tig00000002 AUGUSTUS exon 210743 210783 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  237. tig00000002 AUGUSTUS CDS 210858 211066 0.2 + 0 ID=tig00000002.g11.t1.cds;Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  238. tig00000002 AUGUSTUS exon 210858 211066 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  239. tig00000002 AUGUSTUS CDS 211696 212002 0.41 + 1 ID=tig00000002.g11.t1.cds;Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  240. tig00000002 AUGUSTUS exon 211696 212101 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  241. tig00000002 AUGUSTUS stop_codon 212000 212002 . + 0 Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  242. tig00000002 AUGUSTUS transcription_end_site 212101 212101 . + . Parent=tig00000002.g11.t1;seqName=tig00000002.g11;HintSupport=0
  243. tig00000002 AUGUSTUS gene 212135 214690 0.02 - . ID=tig00000002.g12;seqName=tig00000002.g12;HintSupport=0
  244. tig00000002 AUGUSTUS mRNA 212135 214690 0.02 - . ID=tig00000002.g12.t1;Parent=tig00000002.g12;seqName=tig00000002.g12;HintSupport=0;Description=---NA---;Tags=[NO-BLAST,ANNOTATED];GO_terms=P:RNA-dependent DNA biosynthetic process,P:proteolysis,P:transposition, RNA-mediated,P:RNA phosphodiester bond hydrolysis,F:RNA binding,F:DNA-directed DNA polymerase activity,F:RNA-directed DNA polymerase activity,F:ribonuclease activity,F:peptidase activity,C:retrotransposon nucleocapsid;GO_IDS=P:GO:0006278,P:GO:0006508,P:GO:0032197,P:GO:0090501,F:GO:0003723,F:GO:0003887,F:GO:0003964,F:GO:0004540,F:GO:0008233,C:GO:0000943;Enzyme_Codes=EC:2.7.7.49,EC:2.7.7.7;Enzyme_Names=RNA-directed DNA polymerase,DNA-directed DNA polymerase
  245. tig00000002 AUGUSTUS transcription_end_site 212135 212135 . - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  246. tig00000002 AUGUSTUS exon 212135 212701 . - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  247. tig00000002 AUGUSTUS stop_codon 212394 212396 . - 0 Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  248. tig00000002 AUGUSTUS intron 212702 213632 0.11 - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  249. tig00000002 AUGUSTUS intron 213893 214312 0.19 - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  250. tig00000002 AUGUSTUS intron 214459 214581 0.36 - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  251. tig00000002 AUGUSTUS CDS 212394 212701 0.16 - 2 ID=tig00000002.g12.t1.cds;Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  252. tig00000002 AUGUSTUS CDS 213633 213892 0.08 - 1 ID=tig00000002.g12.t1.cds;Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  253. tig00000002 AUGUSTUS exon 213633 213892 . - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  254. tig00000002 AUGUSTUS CDS 214313 214458 0.21 - 0 ID=tig00000002.g12.t1.cds;Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  255. tig00000002 AUGUSTUS exon 214313 214458 . - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  256. tig00000002 AUGUSTUS CDS 214582 214656 0.37 - 0 ID=tig00000002.g12.t1.cds;Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  257. tig00000002 AUGUSTUS exon 214582 214690 . - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  258. tig00000002 AUGUSTUS start_codon 214654 214656 . - 0 Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  259. tig00000002 AUGUSTUS transcription_start_site 214690 214690 . - . Parent=tig00000002.g12.t1;seqName=tig00000002.g12;HintSupport=0
  260. tig00000003 AUGUSTUS gene 13226 15813 0.42 + . ID=tig00000003.g13;seqName=tig00000003.g13;HintSupport=22.2
  261. tig00000003 AUGUSTUS mRNA 13226 15813 0.42 + . ID=tig00000003.g13.t1;Parent=tig00000003.g13;seqName=tig00000003.g13;HintSupport=22.2;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  262. tig00000003 AUGUSTUS transcription_start_site 13226 13226 . + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  263. tig00000003 AUGUSTUS exon 13226 13483 . + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  264. tig00000003 AUGUSTUS start_codon 13324 13326 . + 0 Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  265. tig00000003 AUGUSTUS intron 13484 13809 1.0 + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  266. tig00000003 AUGUSTUS intron 14259 14922 0.97 + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  267. tig00000003 AUGUSTUS CDS 13324 13483 1.0 + 0 ID=tig00000003.g13.t1.cds;Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  268. tig00000003 AUGUSTUS CDS 13810 14258 0.97 + 2 ID=tig00000003.g13.t1.cds;Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  269. tig00000003 AUGUSTUS exon 13810 14258 . + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  270. tig00000003 AUGUSTUS CDS 14923 14955 0.97 + 0 ID=tig00000003.g13.t1.cds;Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  271. tig00000003 AUGUSTUS exon 14923 14974 . + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  272. tig00000003 AUGUSTUS stop_codon 14953 14955 . + 0 Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  273. tig00000003 AUGUSTUS exon 15676 15813 . + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  274. tig00000003 AUGUSTUS transcription_end_site 15813 15813 . + . Parent=tig00000003.g13.t1;seqName=tig00000003.g13;HintSupport=22.2
  275. tig00000003 AUGUSTUS gene 17796 18624 0.06 + . ID=tig00000003.g14;seqName=tig00000003.g14;HintSupport=0
  276. tig00000003 AUGUSTUS mRNA 17796 18624 0.06 + . ID=tig00000003.g14.t1;Parent=tig00000003.g14;seqName=tig00000003.g14;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  277. tig00000003 AUGUSTUS transcription_start_site 17796 17796 . + . Parent=tig00000003.g14.t1;seqName=tig00000003.g14;HintSupport=0
  278. tig00000003 AUGUSTUS exon 17796 18624 . + . Parent=tig00000003.g14.t1;seqName=tig00000003.g14;HintSupport=0
  279. tig00000003 AUGUSTUS start_codon 17889 17891 . + 0 Parent=tig00000003.g14.t1;seqName=tig00000003.g14;HintSupport=0
  280. tig00000003 AUGUSTUS CDS 17889 18518 0.11 + 0 ID=tig00000003.g14.t1.cds;Parent=tig00000003.g14.t1;seqName=tig00000003.g14;HintSupport=0
  281. tig00000003 AUGUSTUS stop_codon 18516 18518 . + 0 Parent=tig00000003.g14.t1;seqName=tig00000003.g14;HintSupport=0
  282. tig00000003 AUGUSTUS transcription_end_site 18624 18624 . + . Parent=tig00000003.g14.t1;seqName=tig00000003.g14;HintSupport=0
  283. tig00000003 AUGUSTUS gene 23836 26736 0.08 + . ID=tig00000003.g15;seqName=tig00000003.g15;HintSupport=0
  284. tig00000003 AUGUSTUS mRNA 23836 26736 0.08 + . ID=tig00000003.g15.t1;Parent=tig00000003.g15;seqName=tig00000003.g15;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  285. tig00000003 AUGUSTUS transcription_start_site 23836 23836 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  286. tig00000003 AUGUSTUS exon 23836 24076 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  287. tig00000003 AUGUSTUS start_codon 23922 23924 . + 0 Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  288. tig00000003 AUGUSTUS intron 24077 25600 0.36 + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  289. tig00000003 AUGUSTUS intron 25763 25844 0.99 + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  290. tig00000003 AUGUSTUS intron 25947 26025 0.98 + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  291. tig00000003 AUGUSTUS intron 26145 26271 0.97 + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  292. tig00000003 AUGUSTUS CDS 23922 24076 0.35 + 0 ID=tig00000003.g15.t1.cds;Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  293. tig00000003 AUGUSTUS CDS 25601 25762 0.85 + 1 ID=tig00000003.g15.t1.cds;Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  294. tig00000003 AUGUSTUS exon 25601 25762 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  295. tig00000003 AUGUSTUS CDS 25845 25946 0.99 + 1 ID=tig00000003.g15.t1.cds;Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  296. tig00000003 AUGUSTUS exon 25845 25946 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  297. tig00000003 AUGUSTUS CDS 26026 26144 0.99 + 1 ID=tig00000003.g15.t1.cds;Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  298. tig00000003 AUGUSTUS exon 26026 26144 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  299. tig00000003 AUGUSTUS CDS 26272 26441 0.96 + 2 ID=tig00000003.g15.t1.cds;Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  300. tig00000003 AUGUSTUS exon 26272 26736 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  301. tig00000003 AUGUSTUS stop_codon 26439 26441 . + 0 Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  302. tig00000003 AUGUSTUS transcription_end_site 26736 26736 . + . Parent=tig00000003.g15.t1;seqName=tig00000003.g15;HintSupport=0
  303. tig00000003 AUGUSTUS gene 30786 32767 0.04 - . ID=tig00000003.g16;seqName=tig00000003.g16;HintSupport=0
  304. tig00000003 AUGUSTUS mRNA 30786 32767 0.04 - . ID=tig00000003.g16.t1;Parent=tig00000003.g16;seqName=tig00000003.g16;HintSupport=0;Description=---NA---;Tags=[NO-BLAST];GO_terms=;GO_IDS=;Enzyme_Codes=;Enzyme_Names=
  305. tig00000003 AUGUSTUS transcription_end_site 30786 30786 . - . Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  306. tig00000003 AUGUSTUS exon 30786 31227 . - . Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  307. tig00000003 AUGUSTUS stop_codon 30870 30872 . - 0 Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  308. tig00000003 AUGUSTUS intron 31228 32358 0.42 - . Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  309. tig00000003 AUGUSTUS CDS 30870 31227 0.42 - 1 ID=tig00000003.g16.t1.cds;Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  310. tig00000003 AUGUSTUS CDS 32359 32621 0.45 - 0 ID=tig00000003.g16.t1.cds;Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  311. tig00000003 AUGUSTUS exon 32359 32767 . - . Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  312. tig00000003 AUGUSTUS start_codon 32619 32621 . - 0 Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  313. tig00000003 AUGUSTUS transcription_start_site 32767 32767 . - . Parent=tig00000003.g16.t1;seqName=tig00000003.g16;HintSupport=0
  314. tig00000004 AUGUSTUS gene 1436 8990 0.03 + . ID=tig00000004.g17;seqName=tig00000004.g17;HintSupport=0
  315. tig00000004 AUGUSTUS mRNA 1436 8990 0.03 + . ID=tig00000004.g17.t1;Parent=tig00000004.g17;seqName=tig00000004.g17;HintSupport=0;Description=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease;Tags=[BLASTED,MAPPED,ANNOTATED];GO_terms=P:nitrogen compound metabolic process,P:macromolecule metabolic process,P:primary metabolic process,F:hydrolase activity;GO_IDS=P:GO:0006807,P:GO:0043170,P:GO:0044238,F:GO:0016787;Enzyme_Codes=;Enzyme_Names=
  316. tig00000004 AUGUSTUS transcription_start_site 1436 1436 . + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  317. tig00000004 AUGUSTUS exon 1436 1675 . + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  318. tig00000004 AUGUSTUS start_codon 1528 1530 . + 0 Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  319. tig00000004 AUGUSTUS intron 1676 1884 0.82 + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  320. tig00000004 AUGUSTUS intron 2104 2747 0.8 + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  321. tig00000004 AUGUSTUS intron 3065 3510 0.76 + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  322. tig00000004 AUGUSTUS intron 4185 7751 0.57 + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  323. tig00000004 AUGUSTUS intron 7984 8454 0.92 + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  324. tig00000004 AUGUSTUS CDS 1528 1675 0.58 + 0 ID=tig00000004.g17.t1.cds;Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  325. tig00000004 AUGUSTUS CDS 1885 2103 0.88 + 2 ID=tig00000004.g17.t1.cds;Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
  326. tig00000004 AUGUSTUS exon 1885 2103 . + . Parent=tig00000004.g17.t1;seqName=tig00000004.g17;HintSupport=0
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