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parsi dinkhaA+b pass, tuk001 fail

misnomer001
Dec 26th, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: parsifstats.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. ## qpAdm version: 1520
  9. seed: 1173368553
  10. *** recommended that inbreed be explicitly set ***
  11. inbreed set NO
  12.  
  13. left pops:
  14. India_Parsi
  15. Iran_DinkhaTepe_BA_IA_2
  16. Iran_DinkhaTepe_BA_IA_1
  17. GIH.DG
  18.  
  19. right pops:
  20. Dinka.DG
  21. TUK001
  22. Uzbekistan_Bustan_BA
  23. BIR.SG
  24. CHG
  25. EHG
  26. China_Xinjiang_Xiaohe_BA
  27. PPNB
  28. Turkey_N
  29. Iran_GanjDareh_N
  30. Serbia_IronGates_Mesolithic
  31. Russia_MLBA_Sintashta
  32.  
  33. codimension 1
  34. f4info:
  35. f4rank: 2 dof: 9 chisq: 15.722 tail: 0.0729162349 dofdiff: 11 chisqdiff: -15.722 taildiff: 1
  36. B:
  37. scale 1.000 1.000
  38. TUK001 0.731 0.748
  39. Uzbekistan_Bustan_BA 0.712 0.654
  40. BIR.SG -1.435 -0.098
  41. CHG 0.766 0.793
  42. EHG 0.162 1.224
  43. China_Xinjiang_Xiaohe_BA -0.443 1.809
  44. PPNB 1.716 -1.358
  45. Turkey_N 1.608 -1.205
  46. Iran_GanjDareh_N 0.681 1.108
  47. Serbia_IronGates_Mesolithic 0.680 -0.035
  48. Russia_MLBA_Sintashta 0.795 0.282
  49. A:
  50. scale 469.563 2307.519
  51. Iran_DinkhaTepe_BA_IA_2 0.770 1.221
  52. Iran_DinkhaTepe_BA_IA_1 0.977 -1.228
  53. GIH.DG -1.205 0.024
  54.  
  55.  
  56. full rank
  57. f4info:
  58. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 9 chisqdiff: 15.722 taildiff: 0.0729162349
  59. B:
  60. scale 538.434 428.496 400.178
  61. TUK001 0.960 0.488 -0.737
  62. Uzbekistan_Bustan_BA 1.007 0.592 -0.641
  63. BIR.SG -1.095 -1.146 1.562
  64. CHG 0.936 0.476 -0.816
  65. EHG 0.692 -0.031 -0.089
  66. China_Xinjiang_Xiaohe_BA 0.367 -0.678 0.570
  67. PPNB 1.363 1.971 -1.673
  68. Turkey_N 1.267 1.791 -1.585
  69. Iran_GanjDareh_N 1.162 0.507 -0.582
  70. Serbia_IronGates_Mesolithic 0.794 0.718 -0.627
  71. Russia_MLBA_Sintashta 0.965 0.737 -0.750
  72. A:
  73. scale 1.732 1.732 1.732
  74. Iran_DinkhaTepe_BA_IA_2 1.732 0.000 0.000
  75. Iran_DinkhaTepe_BA_IA_1 0.000 1.732 0.000
  76. GIH.DG 0.000 0.000 1.732
  77.  
  78.  
  79. best coefficients: 0.286 0.293 0.420
  80. totmean: 0.286 0.293 0.420
  81. boot mean: 0.285 0.294 0.421
  82. std. errors: 0.046 0.038 0.012
  83.  
  84. error covariance (* 1,000,000)
  85. 2141 -1739 -402
  86. -1739 1481 258
  87. -402 258 144
  88.  
  89.  
  90. summ: India_Parsi 3 0.072916 0.285 0.294 0.421 2141 -1739 -402 1481 258 ...
  91. 144
  92.  
  93. fixed pat wt dof chisq tail prob
  94. 000 0 9 15.722 0.0729162 0.286 0.293 0.420
  95. 001 1 10 397.088 0 3.013 -2.013 0.000 infeasible
  96. 010 1 10 75.415 3.94943e-12 0.628 0.000 0.372
  97. 100 1 10 51.489 1.41863e-07 0.000 0.529 0.471
  98. 011 2 11 874.241 0 1.000 0.000 0.000
  99. 101 2 11 1744.189 0 0.000 1.000 0.000
  100. 110 2 11 2458.389 0 0.000 0.000 1.000
  101. best pat: 000 0.0729162 - -
  102. best pat: 100 1.41863e-07 chi(nested): 35.767 p-value for nested model: 2.22409e-09
  103. best pat: 011 2.13449e-180 not nested
  104.  
  105. coeffs: 0.286 0.293 0.420
  106.  
  107. ## dscore:: f_4(Base, Fit, Rbase, right2)
  108. ## genstat:: f_4(Base, Fit, right1, right2)
  109.  
  110. details: Iran_DinkhaTepe_BA_IA_2 TUK001 0.001783 8.015970
  111. details: Iran_DinkhaTepe_BA_IA_1 TUK001 0.001139 4.739147
  112. details: GIH.DG TUK001 -0.001842 -8.936091
  113. dscore: TUK001 f4: 0.000070 Z: 0.403919
  114.  
  115. details: Iran_DinkhaTepe_BA_IA_2 Uzbekistan_Bustan_BA 0.001871 10.410353
  116. details: Iran_DinkhaTepe_BA_IA_1 Uzbekistan_Bustan_BA 0.001383 7.221103
  117. details: GIH.DG Uzbekistan_Bustan_BA -0.001602 -9.937231
  118. dscore: Uzbekistan_Bustan_BA f4: 0.000268 Z: 1.913386
  119.  
  120. details: Iran_DinkhaTepe_BA_IA_2 BIR.SG -0.002034 -12.316357
  121. details: Iran_DinkhaTepe_BA_IA_1 BIR.SG -0.002675 -14.549739
  122. details: GIH.DG BIR.SG 0.003903 25.167130
  123. dscore: BIR.SG f4: 0.000274 Z: 2.152238
  124.  
  125. details: Iran_DinkhaTepe_BA_IA_2 CHG 0.001738 8.114918
  126. details: Iran_DinkhaTepe_BA_IA_1 CHG 0.001112 4.743442
  127. details: GIH.DG CHG -0.002040 -10.463601
  128. dscore: CHG f4: -0.000034 Z: -0.203443
  129.  
  130. details: Iran_DinkhaTepe_BA_IA_2 EHG 0.001285 6.257095
  131. details: Iran_DinkhaTepe_BA_IA_1 EHG -0.000073 -0.312934
  132. details: GIH.DG EHG -0.000222 -1.206430
  133. dscore: EHG f4: 0.000253 Z: 1.570683
  134.  
  135. details: Iran_DinkhaTepe_BA_IA_2 China_Xinjiang_Xiaohe_BA 0.000681 3.195489
  136. details: Iran_DinkhaTepe_BA_IA_1 China_Xinjiang_Xiaohe_BA -0.001582 -6.457904
  137. details: GIH.DG China_Xinjiang_Xiaohe_BA 0.001424 7.628976
  138. dscore: China_Xinjiang_Xiaohe_BA f4: 0.000330 Z: 1.992143
  139.  
  140. details: Iran_DinkhaTepe_BA_IA_2 PPNB 0.002532 12.032162
  141. details: Iran_DinkhaTepe_BA_IA_1 PPNB 0.004601 21.168618
  142. details: GIH.DG PPNB -0.004181 -23.876666
  143. dscore: PPNB f4: 0.000316 Z: 1.997665
  144.  
  145. details: Iran_DinkhaTepe_BA_IA_2 Turkey_N 0.002354 14.182850
  146. details: Iran_DinkhaTepe_BA_IA_1 Turkey_N 0.004180 23.473268
  147. details: GIH.DG Turkey_N -0.003961 -27.200064
  148. dscore: Turkey_N f4: 0.000234 Z: 1.864406
  149.  
  150. details: Iran_DinkhaTepe_BA_IA_2 Iran_GanjDareh_N 0.002158 11.999003
  151. details: Iran_DinkhaTepe_BA_IA_1 Iran_GanjDareh_N 0.001182 6.055199
  152. details: GIH.DG Iran_GanjDareh_N -0.001455 -9.254498
  153. dscore: Iran_GanjDareh_N f4: 0.000353 Z: 2.557705
  154.  
  155. details: Iran_DinkhaTepe_BA_IA_2 Serbia_IronGates_Mesolithic 0.001474 7.984007
  156. details: Iran_DinkhaTepe_BA_IA_1 Serbia_IronGates_Mesolithic 0.001675 8.541654
  157. details: GIH.DG Serbia_IronGates_Mesolithic -0.001566 -9.711434
  158. dscore: Serbia_IronGates_Mesolithic f4: 0.000255 Z: 1.866409
  159.  
  160. details: Iran_DinkhaTepe_BA_IA_2 Russia_MLBA_Sintashta 0.001793 11.318915
  161. details: Iran_DinkhaTepe_BA_IA_1 Russia_MLBA_Sintashta 0.001721 9.918689
  162. details: GIH.DG Russia_MLBA_Sintashta -0.001874 -13.332711
  163. dscore: Russia_MLBA_Sintashta f4: 0.000230 Z: 1.902991
  164.  
  165. gendstat: Dinka.DG TUK001 0.404
  166. gendstat: Dinka.DG Uzbekistan_Bustan_BA 1.913
  167. gendstat: Dinka.DG BIR.SG 2.152
  168. gendstat: Dinka.DG CHG -0.203
  169. gendstat: Dinka.DG EHG 1.571
  170. gendstat: Dinka.DG China_Xinjiang_Xiaohe_BA 1.992
  171. gendstat: Dinka.DG PPNB 1.998
  172. gendstat: Dinka.DG Turkey_N 1.864
  173. gendstat: Dinka.DG Iran_GanjDareh_N 2.558
  174. gendstat: Dinka.DG Serbia_IronGates_Mesolithic 1.866
  175. gendstat: Dinka.DG Russia_MLBA_Sintashta 1.903
  176. gendstat: TUK001 Uzbekistan_Bustan_BA 1.157
  177. gendstat: TUK001 BIR.SG 1.149
  178. gendstat: TUK001 CHG -0.533
  179. gendstat: TUK001 EHG 0.973
  180. gendstat: TUK001 China_Xinjiang_Xiaohe_BA 1.318
  181. gendstat: TUK001 PPNB 1.288
  182. gendstat: TUK001 Turkey_N 1.011
  183. gendstat: TUK001 Iran_GanjDareh_N 1.647
  184. gendstat: TUK001 Serbia_IronGates_Mesolithic 1.092
  185. gendstat: TUK001 Russia_MLBA_Sintashta 1.017
  186. gendstat: Uzbekistan_Bustan_BA BIR.SG 0.049
  187. gendstat: Uzbekistan_Bustan_BA CHG -1.924
  188. gendstat: Uzbekistan_Bustan_BA EHG -0.095
  189. gendstat: Uzbekistan_Bustan_BA China_Xinjiang_Xiaohe_BA 0.392
  190. gendstat: Uzbekistan_Bustan_BA PPNB 0.299
  191. gendstat: Uzbekistan_Bustan_BA Turkey_N -0.283
  192. gendstat: Uzbekistan_Bustan_BA Iran_GanjDareh_N 0.690
  193. gendstat: Uzbekistan_Bustan_BA Serbia_IronGates_Mesolithic -0.104
  194. gendstat: Uzbekistan_Bustan_BA Russia_MLBA_Sintashta -0.355
  195. gendstat: BIR.SG CHG -1.793
  196. gendstat: BIR.SG EHG -0.136
  197. gendstat: BIR.SG China_Xinjiang_Xiaohe_BA 0.369
  198. gendstat: BIR.SG PPNB 0.247
  199. gendstat: BIR.SG Turkey_N -0.310
  200. gendstat: BIR.SG Iran_GanjDareh_N 0.555
  201. gendstat: BIR.SG Serbia_IronGates_Mesolithic -0.152
  202. gendstat: BIR.SG Russia_MLBA_Sintashta -0.387
  203. gendstat: CHG EHG 1.568
  204. gendstat: CHG China_Xinjiang_Xiaohe_BA 1.950
  205. gendstat: CHG PPNB 1.841
  206. gendstat: CHG Turkey_N 1.693
  207. gendstat: CHG Iran_GanjDareh_N 2.356
  208. gendstat: CHG Serbia_IronGates_Mesolithic 1.839
  209. gendstat: CHG Russia_MLBA_Sintashta 1.832
  210. gendstat: EHG China_Xinjiang_Xiaohe_BA 0.528
  211. gendstat: EHG PPNB 0.353
  212. gendstat: EHG Turkey_N -0.138
  213. gendstat: EHG Iran_GanjDareh_N 0.620
  214. gendstat: EHG Serbia_IronGates_Mesolithic 0.011
  215. gendstat: EHG Russia_MLBA_Sintashta -0.193
  216. gendstat: China_Xinjiang_Xiaohe_BA PPNB -0.074
  217. gendstat: China_Xinjiang_Xiaohe_BA Turkey_N -0.596
  218. gendstat: China_Xinjiang_Xiaohe_BA Iran_GanjDareh_N 0.138
  219. gendstat: China_Xinjiang_Xiaohe_BA Serbia_IronGates_Mesolithic -0.503
  220. gendstat: China_Xinjiang_Xiaohe_BA Russia_MLBA_Sintashta -0.751
  221. gendstat: PPNB Turkey_N -0.651
  222. gendstat: PPNB Iran_GanjDareh_N 0.222
  223. gendstat: PPNB Serbia_IronGates_Mesolithic -0.412
  224. gendstat: PPNB Russia_MLBA_Sintashta -0.631
  225. gendstat: Turkey_N Iran_GanjDareh_N 0.923
  226. gendstat: Turkey_N Serbia_IronGates_Mesolithic 0.212
  227. gendstat: Turkey_N Russia_MLBA_Sintashta -0.045
  228. gendstat: Iran_GanjDareh_N Serbia_IronGates_Mesolithic -0.735
  229. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta -1.025
  230. gendstat: Serbia_IronGates_Mesolithic Russia_MLBA_Sintashta -0.302
  231.  
  232. ##end of qpAdm: 5.386 seconds cpu 0.967 Mbytes in use
  233.  
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