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- require(move)
- loginStored = movebankLogin(username = "Diego_Ellis", password = "")
- all_studies <- getMovebank(entity_type = "study", login=loginStored)
- dim(all_studies)
- head(all_studies$name)
- library(ggplot2)
- world <- map_data("world")
- ggplot() +
- geom_polygon(data = world,
- fill = "grey38",
- aes(x = long, y = lat, group = group)) +
- geom_point(data = all_studies,
- aes(x = main_location_long, y = main_location_lat, color = as.factor(there_are_data_which_i_cannot_see))) +
- scale_color_discrete(guide = guide_legend(title = "Data Restrictions"))
- getMovebank("tag_type", loginStored)
- getMovebank("study", loginStored)
- searchMovebankStudies(x="coyote", login=loginStored)
- head(searchMovebankStudies(x="oose", loginStored))
- head(searchMovebankStudies(x="bird", login = loginStored))
- ID <- getMovebankID(study = "Black-backed jackal, Etosha National Park, Namibia", login=loginStored)
- head(getMovebankAnimals(study = ID, login = loginStored))
- # be patient
- jackals <- getMovebankData(study = "Black-backed jackal, Etosha National Park, Namibia", login = loginStored, removeDuplicatedTimestamps = TRUE)
- idData <- jackals@idData
- jackal_movement <- jackals@data
- jackal_id_movement <- jackals@trackId
- jackal_movement$local_identifier <- jackal_id_movement
- str(jackal_movement)
- jackal_movement <- read.table(file = "black-backed-jackal-Namibia.csv", header=T, sep=",")
- library(tidyverse)
- library(ggmap)
- jackal_box <- make_bbox(lon = location_long, lat = location_lat, data=jackal_movement, f= 0.1)
- jackal_map <- get_map(location = jackal_box, source = 'google', maptype = 'terrain')
- # ggmap(jackal_map) + geom_point(data=jackal_movement, aes(x=location_long, y=location_lat))
- ggmap(jackal_map) + geom_point(data=jackal_movement, aes(x=location_long, y=location_lat, color=local_identifier), alpha = 0.5)
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