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Sep 21st, 2018
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  1. residue = structure[0]['A'][100]
  2.  
  3. residue = structure[0]['A'][2003]
  4.  
  5. File "<stdin>", line 1, in <module>
  6.  
  7. File "/home/azevedo/.local/lib/python3.5/site-packages/Bio/PDB/Chain.py", line 94, in __getitem__
  8. return Entity.__getitem__(self, id)
  9.  
  10. File "/home/azevedo/.local/lib/python3.5/site-packages/Bio/PDB/Entity.py", line 41, in __getitem__
  11. return self.child_dict[id]
  12.  
  13. structure[0]['A'][('H_CYS', 2003, ' ')]
  14.  
  15. <Residue CYS het=H_CYS resseq=2003 icode= >
  16.  
  17. def get_residue_by_number(residues, number):
  18. for residue in residues:
  19. if residue.id[1] == number:
  20. return residue
  21.  
  22. get_residue_by_number(structure[0]['A'].get_residues(), 2003)
  23.  
  24. <Residue CYS het=H_CYS resseq=2003 icode= >
  25.  
  26. get_residue_by_number(structure[0]['A'].get_residues(), 100)
  27.  
  28. <Residue ASP het= resseq=100 icode= >
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