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- allsnps: YES
- ## qpAdm version: 810
- seed: 1624440991
- left pops:
- Armenia_C
- Steppe_Eneolithic
- Anatolia_N
- Geoksyur_EN
- right pops:
- Kazakhstan_Botai.SG
- Ganj_Dareh_N
- PPN
- Iberia_MN
- Russia_MA1.SG
- Georgia_Satsurblia.SG
- Kostenki14.SG
- EEHG
- WEHG
- WSHG
- Onge.DG
- Russia_Shamanka_EN.SG
- Ethiopia_4500BP.SG
- Morocco_Iberomaurusian
- Mbuti.DG
- USA_WA_Kennewick.SG
- Natufian
- 0 Armenia_C 5
- 1 Steppe_Eneolithic 3
- 2 Anatolia_N 22
- 3 Geoksyur_EN 21
- 4 Kazakhstan_Botai.SG 3
- 5 Ganj_Dareh_N 7
- 6 PPN 8
- 7 Iberia_MN 4
- 8 Russia_MA1.SG 1
- 9 Georgia_Satsurblia.SG 1
- 10 Kostenki14.SG 1
- 11 EEHG 4
- 12 WEHG 36
- 13 WSHG 3
- 14 Onge.DG 2
- 15 Russia_Shamanka_EN.SG 10
- 16 Ethiopia_4500BP.SG 1
- 17 Morocco_Iberomaurusian 6
- 18 Mbuti.DG 5
- 19 USA_WA_Kennewick.SG 1
- 20 Natufian 6
- jackknife block size: 0.050
- snps: 1150536 indivs: 150
- number of blocks for block jackknife: 552
- ## ncols: 1150536
- coverage: Armenia_C 1033326
- coverage: Steppe_Eneolithic 1017729
- coverage: Anatolia_N 1134099
- coverage: Geoksyur_EN 1018577
- coverage: Kazakhstan_Botai.SG 1149870
- coverage: Ganj_Dareh_N 1029695
- coverage: PPN 835499
- coverage: Iberia_MN 967760
- coverage: Russia_MA1.SG 805960
- coverage: Georgia_Satsurblia.SG 801311
- coverage: Kostenki14.SG 1048972
- coverage: EEHG 1029995
- coverage: WEHG 1141246
- coverage: WSHG 858019
- coverage: Onge.DG 1120748
- coverage: Russia_Shamanka_EN.SG 1149998
- coverage: Ethiopia_4500BP.SG 1149598
- coverage: Morocco_Iberomaurusian 1101342
- coverage: Mbuti.DG 1150376
- coverage: USA_WA_Kennewick.SG 640773
- coverage: Natufian 535079
- dof (jackknife): 468.873
- numsnps used: 1150536
- codimension 1
- f4info:
- f4rank: 2 dof: 14 chisq: 20.392 tail: 0.118260112 dofdiff: 16 chisqdiff: -20.392 taildiff: 1
- B:
- scale 1.000 1.000
- Ganj_Dareh_N 0.391 -2.693
- PPN 1.876 0.874
- Iberia_MN 1.847 1.430
- Russia_MA1.SG 0.077 -0.049
- Georgia_Satsurblia.SG 0.436 -0.775
- Kostenki14.SG 0.935 0.431
- EEHG 0.168 0.901
- WEHG 0.993 1.558
- WSHG -0.138 -0.108
- Onge.DG 0.734 -0.570
- Russia_Shamanka_EN.SG 0.626 -0.381
- Ethiopia_4500BP.SG 0.967 -0.511
- Morocco_Iberomaurusian 1.385 0.258
- Mbuti.DG 0.974 -0.734
- USA_WA_Kennewick.SG 0.285 -0.186
- Natufian 1.415 0.727
- A:
- scale 319.883 1057.905
- Steppe_Eneolithic -1.439 0.967
- Anatolia_N 0.928 0.258
- Geoksyur_EN -0.259 -1.413
- full rank
- f4info:
- f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 14 chisqdiff: 20.392 taildiff: 0.118260112
- B:
- scale 1.000 1.000 1.000
- Ganj_Dareh_N 0.402 -2.695 1.429
- PPN 1.874 0.878 1.026
- Iberia_MN 1.843 1.431 0.324
- Russia_MA1.SG 0.077 -0.057 0.551
- Georgia_Satsurblia.SG 0.437 -0.772 -1.462
- Kostenki14.SG 0.935 0.423 -1.506
- EEHG 0.163 0.902 -0.275
- WEHG 0.989 1.558 1.452
- WSHG -0.137 -0.107 0.809
- Onge.DG 0.736 -0.569 0.951
- Russia_Shamanka_EN.SG 0.629 -0.382 -0.952
- Ethiopia_4500BP.SG 0.970 -0.510 -0.341
- Morocco_Iberomaurusian 1.384 0.256 -1.245
- Mbuti.DG 0.980 -0.731 -0.306
- USA_WA_Kennewick.SG 0.288 -0.188 1.086
- Natufian 1.414 0.725 -0.712
- A:
- scale 320.182 1062.188 7536.205
- Steppe_Eneolithic -1.435 0.959 1.070
- Anatolia_N 0.937 0.278 0.986
- Geoksyur_EN -0.252 -1.415 0.940
- best coefficients: 0.259 0.476 0.264
- Jackknife mean: 0.259453445 0.476016077 0.264530478
- std. errors: 0.022 0.014 0.023
- error covariance (* 1000000)
- 489 -83 -406
- -83 195 -113
- -406 -113 518
- summ: Armenia_C 3 0.118260 0.259 0.476 0.265 489 -83 -406 195 -113 518
- fixed pat wt dof chisq tail prob
- 000 0 14 20.392 0.11826 0.259 0.476 0.264
- 001 1 15 141.902 9.69685e-23 0.479 0.521 0.000
- 010 1 15 908.850 0 0.692 0.000 0.308
- 100 1 15 164.091 3.73789e-27 0.000 0.523 0.477
- 011 2 16 949.538 0 1.000 0.000 0.000
- 101 2 16 1092.675 0 0.000 1.000 -0.000
- 110 2 16 1031.238 0 0.000 0.000 1.000
- best pat: 000 0.11826 - -
- best pat: 001 9.69685e-23 chi(nested): 121.510 p-value for nested model: 2.9557e-28
- best pat: 011 7.07735e-192 chi(nested): 807.636 p-value for nested model: 1.18127e-177
- coeffs: 0.259 0.476 0.264
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: Steppe_Eneolithic Ganj_Dareh_N -0.004167 -13.782381
- details: Anatolia_N Ganj_Dareh_N 0.000672 2.897607
- details: Geoksyur_EN Ganj_Dareh_N 0.003455 13.274133
- dscore: Ganj_Dareh_N f4: 0.000152 Z: 0.722052
- details: Steppe_Eneolithic PPN -0.007537 -24.611807
- details: Anatolia_N PPN 0.005893 23.331377
- details: Geoksyur_EN PPN -0.002549 -9.947340
- dscore: PPN f4: 0.000176 Z: 0.790432
- details: Steppe_Eneolithic Iberia_MN -0.007025 -23.090834
- details: Anatolia_N Iberia_MN 0.005875 23.737888
- details: Geoksyur_EN Iberia_MN -0.003311 -12.927966
- dscore: Iberia_MN f4: 0.000098 Z: 0.452752
- details: Steppe_Eneolithic Russia_MA1.SG -0.000337 -1.199749
- details: Anatolia_N Russia_MA1.SG 0.000379 1.692871
- details: Geoksyur_EN Russia_MA1.SG 0.000144 0.624125
- dscore: Russia_MA1.SG f4: 0.000131 Z: 0.676589
- details: Steppe_Eneolithic Georgia_Satsurblia.SG -0.003058 -9.209759
- details: Anatolia_N Georgia_Satsurblia.SG 0.000778 2.862673
- details: Geoksyur_EN Georgia_Satsurblia.SG 0.000397 1.368240
- dscore: Georgia_Satsurblia.SG f4: -0.000318 Z: -1.315968
- details: Steppe_Eneolithic Kostenki14.SG -0.004273 -12.627787
- details: Anatolia_N Kostenki14.SG 0.002603 10.245734
- details: Geoksyur_EN Kostenki14.SG -0.001572 -5.993102
- dscore: Kostenki14.SG f4: -0.000286 Z: -1.253562
- details: Steppe_Eneolithic EEHG 0.000059 0.209534
- details: Anatolia_N EEHG 0.000751 3.462420
- details: Geoksyur_EN EEHG -0.001346 -6.241961
- dscore: EEHG f4: 0.000017 Z: 0.089035
- details: Steppe_Eneolithic WEHG -0.002978 -11.645093
- details: Anatolia_N WEHG 0.003500 17.241212
- details: Geoksyur_EN WEHG -0.002714 -12.445002
- dscore: WEHG f4: 0.000175 Z: 0.977194
- details: Steppe_Eneolithic WSHG 0.000619 2.721372
- details: Anatolia_N WSHG -0.000228 -1.307596
- details: Geoksyur_EN WSHG 0.000373 1.836753
- dscore: WSHG f4: 0.000151 Z: 0.954471
- details: Steppe_Eneolithic Onge.DG -0.003743 -12.375260
- details: Anatolia_N Onge.DG 0.002181 8.797032
- details: Geoksyur_EN Onge.DG 0.000357 1.451804
- dscore: Onge.DG f4: 0.000161 Z: 0.752254
- details: Steppe_Eneolithic Russia_Shamanka_EN.SG -0.003338 -13.322468
- details: Anatolia_N Russia_Shamanka_EN.SG 0.001746 8.927538
- details: Geoksyur_EN Russia_Shamanka_EN.SG -0.000013 -0.060632
- dscore: Russia_Shamanka_EN.SG f4: -0.000038 Z: -0.217096
- details: Steppe_Eneolithic Ethiopia_4500BP.SG -0.005071 -14.992052
- details: Anatolia_N Ethiopia_4500BP.SG 0.002645 9.715083
- details: Geoksyur_EN Ethiopia_4500BP.SG -0.000193 -0.683857
- dscore: Ethiopia_4500BP.SG f4: -0.000108 Z: -0.446225
- details: Steppe_Eneolithic Morocco_Iberomaurusian -0.006356 -19.348226
- details: Anatolia_N Morocco_Iberomaurusian 0.003945 15.369145
- details: Geoksyur_EN Morocco_Iberomaurusian -0.001653 -5.907200
- dscore: Morocco_Iberomaurusian f4: -0.000208 Z: -0.895965
- details: Steppe_Eneolithic Mbuti.DG -0.005307 -17.392751
- details: Anatolia_N Mbuti.DG 0.002623 11.164543
- details: Geoksyur_EN Mbuti.DG 0.000043 0.166306
- dscore: Mbuti.DG f4: -0.000117 Z: -0.546907
- details: Steppe_Eneolithic USA_WA_Kennewick.SG -0.001325 -5.487253
- details: Anatolia_N USA_WA_Kennewick.SG 0.001003 4.594205
- details: Geoksyur_EN USA_WA_Kennewick.SG 0.000233 1.080424
- dscore: USA_WA_Kennewick.SG f4: 0.000195 Z: 1.058505
- details: Steppe_Eneolithic Natufian -0.005876 -20.952710
- details: Anatolia_N Natufian 0.004288 17.662946
- details: Geoksyur_EN Natufian -0.002167 -9.132581
- dscore: Natufian f4: -0.000057 Z: -0.270468
- gendstat: Kazakhstan_Botai.SG Ganj_Dareh_N 0.722
- gendstat: Kazakhstan_Botai.SG PPN 0.790
- gendstat: Kazakhstan_Botai.SG Iberia_MN 0.453
- gendstat: Kazakhstan_Botai.SG Russia_MA1.SG 0.677
- gendstat: Kazakhstan_Botai.SG Georgia_Satsurblia.SG -1.316
- gendstat: Kazakhstan_Botai.SG Kostenki14.SG -1.254
- gendstat: Kazakhstan_Botai.SG EEHG 0.089
- gendstat: Kazakhstan_Botai.SG WEHG 0.977
- gendstat: Kazakhstan_Botai.SG WSHG 0.954
- gendstat: Kazakhstan_Botai.SG Onge.DG 0.752
- gendstat: Kazakhstan_Botai.SG Russia_Shamanka_EN.SG -0.217
- gendstat: Kazakhstan_Botai.SG Ethiopia_4500BP.SG -0.446
- gendstat: Kazakhstan_Botai.SG Morocco_Iberomaurusian -0.896
- gendstat: Kazakhstan_Botai.SG Mbuti.DG -0.547
- gendstat: Kazakhstan_Botai.SG USA_WA_Kennewick.SG 1.059
- gendstat: Kazakhstan_Botai.SG Natufian -0.270
- gendstat: Ganj_Dareh_N PPN 0.114
- gendstat: Ganj_Dareh_N Iberia_MN -0.270
- gendstat: Ganj_Dareh_N Russia_MA1.SG -0.084
- gendstat: Ganj_Dareh_N Georgia_Satsurblia.SG -2.070
- gendstat: Ganj_Dareh_N Kostenki14.SG -1.806
- gendstat: Ganj_Dareh_N EEHG -0.589
- gendstat: Ganj_Dareh_N WEHG 0.124
- gendstat: Ganj_Dareh_N WSHG -0.007
- gendstat: Ganj_Dareh_N Onge.DG 0.044
- gendstat: Ganj_Dareh_N Russia_Shamanka_EN.SG -1.029
- gendstat: Ganj_Dareh_N Ethiopia_4500BP.SG -1.204
- gendstat: Ganj_Dareh_N Morocco_Iberomaurusian -1.791
- gendstat: Ganj_Dareh_N Mbuti.DG -1.468
- gendstat: Ganj_Dareh_N USA_WA_Kennewick.SG 0.185
- gendstat: Ganj_Dareh_N Natufian -1.006
- gendstat: PPN Iberia_MN -0.426
- gendstat: PPN Russia_MA1.SG -0.180
- gendstat: PPN Georgia_Satsurblia.SG -1.976
- gendstat: PPN Kostenki14.SG -1.905
- gendstat: PPN EEHG -0.679
- gendstat: PPN WEHG -0.002
- gendstat: PPN WSHG -0.108
- gendstat: PPN Onge.DG -0.068
- gendstat: PPN Russia_Shamanka_EN.SG -1.067
- gendstat: PPN Ethiopia_4500BP.SG -1.296
- gendstat: PPN Morocco_Iberomaurusian -1.925
- gendstat: PPN Mbuti.DG -1.542
- gendstat: PPN USA_WA_Kennewick.SG 0.080
- gendstat: PPN Natufian -1.226
- gendstat: Iberia_MN Russia_MA1.SG 0.130
- gendstat: Iberia_MN Georgia_Satsurblia.SG -1.700
- gendstat: Iberia_MN Kostenki14.SG -1.617
- gendstat: Iberia_MN EEHG -0.348
- gendstat: Iberia_MN WEHG 0.462
- gendstat: Iberia_MN WSHG 0.220
- gendstat: Iberia_MN Onge.DG 0.286
- gendstat: Iberia_MN Russia_Shamanka_EN.SG -0.727
- gendstat: Iberia_MN Ethiopia_4500BP.SG -0.929
- gendstat: Iberia_MN Morocco_Iberomaurusian -1.522
- gendstat: Iberia_MN Mbuti.DG -1.152
- gendstat: Iberia_MN USA_WA_Kennewick.SG 0.418
- gendstat: Iberia_MN Natufian -0.830
- gendstat: Russia_MA1.SG Georgia_Satsurblia.SG -1.654
- gendstat: Russia_MA1.SG Kostenki14.SG -1.619
- gendstat: Russia_MA1.SG EEHG -0.508
- gendstat: Russia_MA1.SG WEHG 0.207
- gendstat: Russia_MA1.SG WSHG 0.087
- gendstat: Russia_MA1.SG Onge.DG 0.122
- gendstat: Russia_MA1.SG Russia_Shamanka_EN.SG -0.783
- gendstat: Russia_MA1.SG Ethiopia_4500BP.SG -0.875
- gendstat: Russia_MA1.SG Morocco_Iberomaurusian -1.273
- gendstat: Russia_MA1.SG Mbuti.DG -0.999
- gendstat: Russia_MA1.SG USA_WA_Kennewick.SG 0.276
- gendstat: Russia_MA1.SG Natufian -0.745
- gendstat: Georgia_Satsurblia.SG Kostenki14.SG 0.114
- gendstat: Georgia_Satsurblia.SG EEHG 1.300
- gendstat: Georgia_Satsurblia.SG WEHG 2.234
- gendstat: Georgia_Satsurblia.SG WSHG 1.846
- gendstat: Georgia_Satsurblia.SG Onge.DG 1.967
- gendstat: Georgia_Satsurblia.SG Russia_Shamanka_EN.SG 1.191
- gendstat: Georgia_Satsurblia.SG Ethiopia_4500BP.SG 0.792
- gendstat: Georgia_Satsurblia.SG Morocco_Iberomaurusian 0.441
- gendstat: Georgia_Satsurblia.SG Mbuti.DG 0.840
- gendstat: Georgia_Satsurblia.SG USA_WA_Kennewick.SG 1.893
- gendstat: Georgia_Satsurblia.SG Natufian 1.000
- gendstat: Kostenki14.SG EEHG 1.200
- gendstat: Kostenki14.SG WEHG 2.227
- gendstat: Kostenki14.SG WSHG 1.765
- gendstat: Kostenki14.SG Onge.DG 1.825
- gendstat: Kostenki14.SG Russia_Shamanka_EN.SG 1.125
- gendstat: Kostenki14.SG Ethiopia_4500BP.SG 0.679
- gendstat: Kostenki14.SG Morocco_Iberomaurusian 0.304
- gendstat: Kostenki14.SG Mbuti.DG 0.718
- gendstat: Kostenki14.SG USA_WA_Kennewick.SG 1.926
- gendstat: Kostenki14.SG Natufian 0.944
- gendstat: EEHG WEHG 0.840
- gendstat: EEHG WSHG 0.649
- gendstat: EEHG Onge.DG 0.598
- gendstat: EEHG Russia_Shamanka_EN.SG -0.268
- gendstat: EEHG Ethiopia_4500BP.SG -0.484
- gendstat: EEHG Morocco_Iberomaurusian -0.921
- gendstat: EEHG Mbuti.DG -0.582
- gendstat: EEHG USA_WA_Kennewick.SG 0.792
- gendstat: EEHG Natufian -0.317
- gendstat: WEHG WSHG -0.128
- gendstat: WEHG Onge.DG -0.073
- gendstat: WEHG Russia_Shamanka_EN.SG -1.340
- gendstat: WEHG Ethiopia_4500BP.SG -1.324
- gendstat: WEHG Morocco_Iberomaurusian -1.912
- gendstat: WEHG Mbuti.DG -1.596
- gendstat: WEHG USA_WA_Kennewick.SG 0.098
- gendstat: WEHG Natufian -1.238
- gendstat: WSHG Onge.DG 0.046
- gendstat: WSHG Russia_Shamanka_EN.SG -0.967
- gendstat: WSHG Ethiopia_4500BP.SG -1.023
- gendstat: WSHG Morocco_Iberomaurusian -1.447
- gendstat: WSHG Mbuti.DG -1.156
- gendstat: WSHG USA_WA_Kennewick.SG 0.213
- gendstat: WSHG Natufian -0.885
- gendstat: Onge.DG Russia_Shamanka_EN.SG -1.192
- gendstat: Onge.DG Ethiopia_4500BP.SG -1.128
- gendstat: Onge.DG Morocco_Iberomaurusian -1.676
- gendstat: Onge.DG Mbuti.DG -1.358
- gendstat: Onge.DG USA_WA_Kennewick.SG 0.150
- gendstat: Onge.DG Natufian -0.966
- gendstat: Russia_Shamanka_EN.SG Ethiopia_4500BP.SG -0.330
- gendstat: Russia_Shamanka_EN.SG Morocco_Iberomaurusian -0.882
- gendstat: Russia_Shamanka_EN.SG Mbuti.DG -0.458
- gendstat: Russia_Shamanka_EN.SG USA_WA_Kennewick.SG 1.311
- gendstat: Russia_Shamanka_EN.SG Natufian -0.094
- gendstat: Ethiopia_4500BP.SG Morocco_Iberomaurusian -0.505
- gendstat: Ethiopia_4500BP.SG Mbuti.DG -0.062
- gendstat: Ethiopia_4500BP.SG USA_WA_Kennewick.SG 1.238
- gendstat: Ethiopia_4500BP.SG Natufian 0.235
- gendstat: Morocco_Iberomaurusian Mbuti.DG 0.516
- gendstat: Morocco_Iberomaurusian USA_WA_Kennewick.SG 1.700
- gendstat: Morocco_Iberomaurusian Natufian 0.730
- gendstat: Mbuti.DG USA_WA_Kennewick.SG 1.360
- gendstat: Mbuti.DG Natufian 0.330
- gendstat: USA_WA_Kennewick.SG Natufian -1.087
- ## end of run
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