KaminoFactory

import java.util.Scanner;

public class KaminoFactory {

    public static void main(String[] args) {
        Scanner scanner = new Scanner(System.in);

        int length = Integer.parseInt(scanner.nextLine());
        String input = scanner.nextLine();

        int bestTotalSum = 0;
        int bestIndex = Integer.MAX_VALUE;
        int bestAmountUnits = 0;
        int arrNumber = 0;
        int bestArrNumber = 0;
        int currentNumber = 0;

        int[] bestNumbersDNA = new int[length];

        while (!input.equals("Clone them!")) {

            String[] StringDNA = input.split("!");
            int[] numbersDNA = new int[length];

            for (int i = 0; i < StringDNA.length; i++) {
                numbersDNA[i] = Integer.parseInt(StringDNA[i]);
            }

            arrNumber++;
            int totalSum = 0;
            int unitsAmount = 0;
            int currentUnitsAmount = 0;
            int currentIndex = Integer.MAX_VALUE;
            int currentArrIndex = 0;

            for (int i = 0; i < numbersDNA.length; i++) {
                currentNumber = numbersDNA[i];

                if (currentNumber == 1) {
                    currentUnitsAmount += currentNumber;
                    if (currentUnitsAmount > unitsAmount) {
                        unitsAmount = currentUnitsAmount;
                    }
                    if (i < numbersDNA.length - 1) {
                        if (numbersDNA[i + 1] == 1) {
                            currentArrIndex = i;
                            if (currentArrIndex < currentIndex) {
                                currentIndex = i;
                            }
                        }
                    }
                } else {
                    currentUnitsAmount = 0;
                }
                totalSum += numbersDNA[i];
            }

            if ((unitsAmount > bestAmountUnits) || (unitsAmount == 0) || (unitsAmount == bestAmountUnits && currentIndex < bestIndex) || (unitsAmount == bestAmountUnits && currentIndex == bestIndex && totalSum > bestTotalSum)) {
                for (int i = 0; i < bestNumbersDNA.length; i++) {
                    bestNumbersDNA[i] = Integer.parseInt(StringDNA[i]);
                }
                bestTotalSum = totalSum;
                bestArrNumber = arrNumber;
                bestAmountUnits = unitsAmount;
                bestIndex = currentIndex;
            }

            input = scanner.nextLine();
        }

        System.out.printf("Best DNA sample %d with sum: %d.%n", bestArrNumber, bestTotalSum);

        for (int i = 0; i < bestNumbersDNA.length; i++) {
            System.out.print(bestNumbersDNA[i] + " ");
        }
    }
}