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  1. INSTALLING STINGRAY
  2. _____________________________________________________________________
  3.  
  4.  
  5.  
  6. vic@vic-x220:~/Code/Stingray/stingray$ sudo python3.5 setup.py install
  7. [sudo] password for vic:
  8. running install
  9. running bdist_egg
  10. running egg_info
  11. writing dependency_links to stingray.egg-info/dependency_links.txt
  12. writing requirements to stingray.egg-info/requires.txt
  13. writing stingray.egg-info/PKG-INFO
  14. writing top-level names to stingray.egg-info/top_level.txt
  15. reading manifest file 'stingray.egg-info/SOURCES.txt'
  16. reading manifest template 'MANIFEST.in'
  17. warning: no files found matching 'CHANGES.rst'
  18. warning: no files found matching '*.c' under directory '*.pyx'
  19. warning: no files found matching '*.pxd' under directory '*.pyx'
  20. warning: no files found matching '*' under directory 'licenses'
  21. warning: no files found matching '*' under directory 'cextern'
  22. warning: no files found matching '*' under directory 'scripts'
  23. no previously-included directories found matching 'build'
  24. no previously-included directories found matching 'docs/_build'
  25. no previously-included directories found matching 'docs/api'
  26. warning: no previously-included files matching '*.o' found anywhere in distribution
  27. writing manifest file 'stingray.egg-info/SOURCES.txt'
  28. installing library code to build/bdist.linux-x86_64/egg
  29. running install_lib
  30. running build_py
  31. creating build/bdist.linux-x86_64/egg
  32. creating build/bdist.linux-x86_64/egg/stingray
  33. copying build/lib.linux-x86_64-3.5/stingray/crossspectrum.py -> build/bdist.linux-x86_64/egg/stingray
  34. copying build/lib.linux-x86_64-3.5/stingray/covariancespectrum.py -> build/bdist.linux-x86_64/egg/stingray
  35. creating build/bdist.linux-x86_64/egg/stingray/simulator
  36. copying build/lib.linux-x86_64-3.5/stingray/simulator/models.py -> build/bdist.linux-x86_64/egg/stingray/simulator
  37. creating build/bdist.linux-x86_64/egg/stingray/simulator/tests
  38. copying build/lib.linux-x86_64-3.5/stingray/simulator/tests/test_transfer.py -> build/bdist.linux-x86_64/egg/stingray/simulator/tests
  39. copying build/lib.linux-x86_64-3.5/stingray/simulator/tests/test_simulator.py -> build/bdist.linux-x86_64/egg/stingray/simulator/tests
  40. copying build/lib.linux-x86_64-3.5/stingray/simulator/tests/__init__.py -> build/bdist.linux-x86_64/egg/stingray/simulator/tests
  41. copying build/lib.linux-x86_64-3.5/stingray/simulator/simulator.py -> build/bdist.linux-x86_64/egg/stingray/simulator
  42. copying build/lib.linux-x86_64-3.5/stingray/simulator/transfer.py -> build/bdist.linux-x86_64/egg/stingray/simulator
  43. copying build/lib.linux-x86_64-3.5/stingray/simulator/__init__.py -> build/bdist.linux-x86_64/egg/stingray/simulator
  44. copying build/lib.linux-x86_64-3.5/stingray/sampledata.py -> build/bdist.linux-x86_64/egg/stingray
  45. copying build/lib.linux-x86_64-3.5/stingray/powerspectrum.py -> build/bdist.linux-x86_64/egg/stingray
  46. creating build/bdist.linux-x86_64/egg/stingray/tests
  47. copying build/lib.linux-x86_64-3.5/stingray/tests/test_covariancespectrum.py -> build/bdist.linux-x86_64/egg/stingray/tests
  48. copying build/lib.linux-x86_64-3.5/stingray/tests/test_utils.py -> build/bdist.linux-x86_64/egg/stingray/tests
  49. copying build/lib.linux-x86_64-3.5/stingray/tests/test_events.py -> build/bdist.linux-x86_64/egg/stingray/tests
  50. copying build/lib.linux-x86_64-3.5/stingray/tests/test_powerspectrum.py -> build/bdist.linux-x86_64/egg/stingray/tests
  51. copying build/lib.linux-x86_64-3.5/stingray/tests/test_lightcurve.py -> build/bdist.linux-x86_64/egg/stingray/tests
  52. copying build/lib.linux-x86_64-3.5/stingray/tests/test_crossspectrum.py -> build/bdist.linux-x86_64/egg/stingray/tests
  53. copying build/lib.linux-x86_64-3.5/stingray/tests/test_sampledata.py -> build/bdist.linux-x86_64/egg/stingray/tests
  54. copying build/lib.linux-x86_64-3.5/stingray/tests/setup_package.py -> build/bdist.linux-x86_64/egg/stingray/tests
  55. copying build/lib.linux-x86_64-3.5/stingray/tests/test_io.py -> build/bdist.linux-x86_64/egg/stingray/tests
  56. copying build/lib.linux-x86_64-3.5/stingray/tests/test_gti.py -> build/bdist.linux-x86_64/egg/stingray/tests
  57. copying build/lib.linux-x86_64-3.5/stingray/tests/__init__.py -> build/bdist.linux-x86_64/egg/stingray/tests
  58. copying build/lib.linux-x86_64-3.5/stingray/tests/coveragerc -> build/bdist.linux-x86_64/egg/stingray/tests
  59. creating build/bdist.linux-x86_64/egg/stingray/tests/data
  60. copying build/lib.linux-x86_64-3.5/stingray/tests/data/monol_testA.evt -> build/bdist.linux-x86_64/egg/stingray/tests/data
  61. copying build/lib.linux-x86_64-3.5/stingray/tests/data/lcurveA.fits -> build/bdist.linux-x86_64/egg/stingray/tests/data
  62. copying build/lib.linux-x86_64-3.5/stingray/exceptions.py -> build/bdist.linux-x86_64/egg/stingray
  63. creating build/bdist.linux-x86_64/egg/stingray/pulse
  64. creating build/bdist.linux-x86_64/egg/stingray/pulse/tests
  65. copying build/lib.linux-x86_64-3.5/stingray/pulse/tests/test_pulse.py -> build/bdist.linux-x86_64/egg/stingray/pulse/tests
  66. copying build/lib.linux-x86_64-3.5/stingray/pulse/tests/__init__.py -> build/bdist.linux-x86_64/egg/stingray/pulse/tests
  67. copying build/lib.linux-x86_64-3.5/stingray/pulse/pulsar.py -> build/bdist.linux-x86_64/egg/stingray/pulse
  68. copying build/lib.linux-x86_64-3.5/stingray/pulse/__init__.py -> build/bdist.linux-x86_64/egg/stingray/pulse
  69. copying build/lib.linux-x86_64-3.5/stingray/events.py -> build/bdist.linux-x86_64/egg/stingray
  70. copying build/lib.linux-x86_64-3.5/stingray/gti.py -> build/bdist.linux-x86_64/egg/stingray
  71. copying build/lib.linux-x86_64-3.5/stingray/_astropy_init.py -> build/bdist.linux-x86_64/egg/stingray
  72. copying build/lib.linux-x86_64-3.5/stingray/io.py -> build/bdist.linux-x86_64/egg/stingray
  73. creating build/bdist.linux-x86_64/egg/stingray/datasets
  74. copying build/lib.linux-x86_64-3.5/stingray/datasets/lc_sample.txt -> build/bdist.linux-x86_64/egg/stingray/datasets
  75. copying build/lib.linux-x86_64-3.5/stingray/conftest.py -> build/bdist.linux-x86_64/egg/stingray
  76. copying build/lib.linux-x86_64-3.5/stingray/version.py -> build/bdist.linux-x86_64/egg/stingray
  77. copying build/lib.linux-x86_64-3.5/stingray/__init__.py -> build/bdist.linux-x86_64/egg/stingray
  78. creating build/bdist.linux-x86_64/egg/stingray/modeling
  79. copying build/lib.linux-x86_64-3.5/stingray/modeling/scripts.py -> build/bdist.linux-x86_64/egg/stingray/modeling
  80. creating build/bdist.linux-x86_64/egg/stingray/modeling/tests
  81. copying build/lib.linux-x86_64-3.5/stingray/modeling/tests/test_scripts.py -> build/bdist.linux-x86_64/egg/stingray/modeling/tests
  82. copying build/lib.linux-x86_64-3.5/stingray/modeling/tests/test_parameterestimation.py -> build/bdist.linux-x86_64/egg/stingray/modeling/tests
  83. copying build/lib.linux-x86_64-3.5/stingray/modeling/tests/test_posterior.py -> build/bdist.linux-x86_64/egg/stingray/modeling/tests
  84. copying build/lib.linux-x86_64-3.5/stingray/modeling/tests/__init__.py -> build/bdist.linux-x86_64/egg/stingray/modeling/tests
  85. copying build/lib.linux-x86_64-3.5/stingray/modeling/parameterestimation.py -> build/bdist.linux-x86_64/egg/stingray/modeling
  86. copying build/lib.linux-x86_64-3.5/stingray/modeling/posterior.py -> build/bdist.linux-x86_64/egg/stingray/modeling
  87. copying build/lib.linux-x86_64-3.5/stingray/modeling/__init__.py -> build/bdist.linux-x86_64/egg/stingray/modeling
  88. copying build/lib.linux-x86_64-3.5/stingray/utils.py -> build/bdist.linux-x86_64/egg/stingray
  89. copying build/lib.linux-x86_64-3.5/stingray/lightcurve.py -> build/bdist.linux-x86_64/egg/stingray
  90. byte-compiling build/bdist.linux-x86_64/egg/stingray/crossspectrum.py to crossspectrum.cpython-35.pyc
  91. byte-compiling build/bdist.linux-x86_64/egg/stingray/covariancespectrum.py to covariancespectrum.cpython-35.pyc
  92. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/models.py to models.cpython-35.pyc
  93. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/tests/test_transfer.py to test_transfer.cpython-35.pyc
  94. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/tests/test_simulator.py to test_simulator.cpython-35.pyc
  95. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/tests/__init__.py to __init__.cpython-35.pyc
  96. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/simulator.py to simulator.cpython-35.pyc
  97. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/transfer.py to transfer.cpython-35.pyc
  98. byte-compiling build/bdist.linux-x86_64/egg/stingray/simulator/__init__.py to __init__.cpython-35.pyc
  99. byte-compiling build/bdist.linux-x86_64/egg/stingray/sampledata.py to sampledata.cpython-35.pyc
  100. byte-compiling build/bdist.linux-x86_64/egg/stingray/powerspectrum.py to powerspectrum.cpython-35.pyc
  101. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_covariancespectrum.py to test_covariancespectrum.cpython-35.pyc
  102. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_utils.py to test_utils.cpython-35.pyc
  103. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_events.py to test_events.cpython-35.pyc
  104. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_powerspectrum.py to test_powerspectrum.cpython-35.pyc
  105. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_lightcurve.py to test_lightcurve.cpython-35.pyc
  106. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_crossspectrum.py to test_crossspectrum.cpython-35.pyc
  107. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_sampledata.py to test_sampledata.cpython-35.pyc
  108. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/setup_package.py to setup_package.cpython-35.pyc
  109. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_io.py to test_io.cpython-35.pyc
  110. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/test_gti.py to test_gti.cpython-35.pyc
  111. byte-compiling build/bdist.linux-x86_64/egg/stingray/tests/__init__.py to __init__.cpython-35.pyc
  112. byte-compiling build/bdist.linux-x86_64/egg/stingray/exceptions.py to exceptions.cpython-35.pyc
  113. byte-compiling build/bdist.linux-x86_64/egg/stingray/pulse/tests/test_pulse.py to test_pulse.cpython-35.pyc
  114. byte-compiling build/bdist.linux-x86_64/egg/stingray/pulse/tests/__init__.py to __init__.cpython-35.pyc
  115. byte-compiling build/bdist.linux-x86_64/egg/stingray/pulse/pulsar.py to pulsar.cpython-35.pyc
  116. byte-compiling build/bdist.linux-x86_64/egg/stingray/pulse/__init__.py to __init__.cpython-35.pyc
  117. byte-compiling build/bdist.linux-x86_64/egg/stingray/events.py to events.cpython-35.pyc
  118. byte-compiling build/bdist.linux-x86_64/egg/stingray/gti.py to gti.cpython-35.pyc
  119. byte-compiling build/bdist.linux-x86_64/egg/stingray/_astropy_init.py to _astropy_init.cpython-35.pyc
  120. byte-compiling build/bdist.linux-x86_64/egg/stingray/io.py to io.cpython-35.pyc
  121. byte-compiling build/bdist.linux-x86_64/egg/stingray/conftest.py to conftest.cpython-35.pyc
  122. byte-compiling build/bdist.linux-x86_64/egg/stingray/version.py to version.cpython-35.pyc
  123. byte-compiling build/bdist.linux-x86_64/egg/stingray/__init__.py to __init__.cpython-35.pyc
  124. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/scripts.py to scripts.cpython-35.pyc
  125. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/tests/test_scripts.py to test_scripts.cpython-35.pyc
  126. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/tests/test_parameterestimation.py to test_parameterestimation.cpython-35.pyc
  127. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/tests/test_posterior.py to test_posterior.cpython-35.pyc
  128. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/tests/__init__.py to __init__.cpython-35.pyc
  129. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/parameterestimation.py to parameterestimation.cpython-35.pyc
  130. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/posterior.py to posterior.cpython-35.pyc
  131. byte-compiling build/bdist.linux-x86_64/egg/stingray/modeling/__init__.py to __init__.cpython-35.pyc
  132. byte-compiling build/bdist.linux-x86_64/egg/stingray/utils.py to utils.cpython-35.pyc
  133. byte-compiling build/bdist.linux-x86_64/egg/stingray/lightcurve.py to lightcurve.cpython-35.pyc
  134. creating build/bdist.linux-x86_64/egg/EGG-INFO
  135. copying stingray.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
  136. copying stingray.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
  137. copying stingray.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
  138. copying stingray.egg-info/not-zip-safe -> build/bdist.linux-x86_64/egg/EGG-INFO
  139. copying stingray.egg-info/requires.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
  140. copying stingray.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
  141. creating 'dist/stingray-0.1.dev787-py3.5.egg' and adding 'build/bdist.linux-x86_64/egg' to it
  142. removing 'build/bdist.linux-x86_64/egg' (and everything under it)
  143. Processing stingray-0.1.dev787-py3.5.egg
  144. removing '/usr/local/lib/python3.5/site-packages/stingray-0.1.dev787-py3.5.egg' (and everything under it)
  145. creating /usr/local/lib/python3.5/site-packages/stingray-0.1.dev787-py3.5.egg
  146. Extracting stingray-0.1.dev787-py3.5.egg to /usr/local/lib/python3.5/site-packages
  147. stingray 0.1.dev787 is already the active version in easy-install.pth
  148.  
  149. Installed /usr/local/lib/python3.5/site-packages/stingray-0.1.dev787-py3.5.egg
  150. Processing dependencies for stingray==0.1.dev787
  151. Searching for astropy==1.3.1
  152. Best match: astropy 1.3.1
  153. Adding astropy 1.3.1 to easy-install.pth file
  154. Installing wcslint script to /usr/local/bin
  155. Installing fitscheck script to /usr/local/bin
  156. Installing volint script to /usr/local/bin
  157. Installing fitsdiff script to /usr/local/bin
  158. Installing fits2bitmap script to /usr/local/bin
  159. Installing fitsinfo script to /usr/local/bin
  160. Installing fitsheader script to /usr/local/bin
  161. Installing samp_hub script to /usr/local/bin
  162.  
  163. Using /usr/local/lib/python3.5/site-packages
  164. Searching for numpy==1.12.1
  165. Best match: numpy 1.12.1
  166. Adding numpy 1.12.1 to easy-install.pth file
  167.  
  168. Using /usr/local/lib/python3.5/site-packages
  169. Finished processing dependencies for stingray==0.1.dev787
  170.  
  171. _______________________________________________________________________________________
  172. EXECUTING THE TEST
  173. _______________________________________________________________________________________
  174.  
  175.  
  176. vic@vic-x220:~/Code/Stingray/stingray$ python3.5 setup.py test
  177. running test
  178. running build
  179. running build_py
  180. Traceback (most recent call last):
  181. File "<string>", line 1, in <module>
  182. File "/tmp/stingray-test-q64zggd6/lib.linux-x86_64-3.5/stingray/__init__.py", line 11, in <module>
  183. from stingray.lightcurve import *
  184. File "/tmp/stingray-test-q64zggd6/lib.linux-x86_64-3.5/stingray/lightcurve.py", line 9, in <module>
  185. import stingray.io as io
  186. File "/tmp/stingray-test-q64zggd6/lib.linux-x86_64-3.5/stingray/io.py", line 12, in <module>
  187. from astropy.io import fits
  188. File "/usr/local/lib/python3.5/site-packages/astropy/io/fits/__init__.py", line 70, in <module>
  189. from . import convenience
  190. File "/usr/local/lib/python3.5/site-packages/astropy/io/fits/convenience.py", line 64, in <module>
  191. from .file import FILE_MODES, _File
  192. File "/usr/local/lib/python3.5/site-packages/astropy/io/fits/file.py", line 5, in <module>
  193. import bz2
  194. File "/usr/local/lib/python3.5/bz2.py", line 22, in <module>
  195. from _bz2 import BZ2Compressor, BZ2Decompressor
  196. ImportError: No module named '_bz2'
  197. vic@vic-x220:~/Code/Stingray/stingray$
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