Advertisement
tom

Issues loading RESTServer extension on Headless Linux instal

tom
Mar 30th, 2016
198
0
Never
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
Bash 8.04 KB | None | 0 0
  1. [root@dfw share]# chimera
  2. Package "DBPuppet" already exists and tool(s) in it will not be loaded
  3.  
  4. Package "AlignChains" already exists and tool(s) in it will not be loaded
  5.  
  6. Package "UnitCell" already exists and tool(s) in it will not be loaded
  7.  
  8. Package "Solvate" already exists and tool(s) in it will not be loaded
  9.  
  10. Package "MatchMaker" already exists and tool(s) in it will not be loaded
  11.  
  12. Package "CrystalContacts" already exists and tool(s) in it will not be loaded
  13.  
  14. Package "Segger" already exists and tool(s) in it will not be loaded
  15.  
  16. Package "ChangeChainIDs" already exists and tool(s) in it will not be loaded
  17.  
  18. Package "AddCharge" already exists and tool(s) in it will not be loaded
  19.  
  20. Package "VolumeSeries" already exists and tool(s) in it will not be loaded
  21.  
  22. Package "RibbonStyleEditor" already exists and tool(s) in it will not be loaded
  23.  
  24. Package "ResRenumber" already exists and tool(s) in it will not be loaded
  25.  
  26. Error while importing Combine from /opt/UCSF/Chimera64-1.10.2/share:
  27. Traceback (most recent call last):
  28.   File "/opt/UCSF/Chimera64-1.10.2/share/chimera/extension/base.py", line 349, in _importExtension
  29.     __import__(module)
  30.   File "/opt/UCSF/Chimera64-1.10.2/share/Combine/ChimeraExtension.py", line 32, in <module>
  31.     balloon="Combine molecular models into new model", moleculesOnly=True)
  32.   File "/opt/UCSF/Chimera64-1.10.2/share/ModelPanel/base.py", line 40, in addButton
  33.     "Button named '%s' already exists" % name
  34. KeyError: "Button named 'copy/combine...' already exists"
  35.  
  36. Package "ResProp" already exists and tool(s) in it will not be loaded
  37.  
  38. Package "ShowAttr" already exists and tool(s) in it will not be loaded
  39.  
  40. Package "MoveSelection" already exists and tool(s) in it will not be loaded
  41.  
  42. Package "RRDistMaps" already exists and tool(s) in it will not be loaded
  43.  
  44. Package "BuildStructure" already exists and tool(s) in it will not be loaded
  45.  
  46. Package "Ilabel" already exists and tool(s) in it will not be loaded
  47.  
  48. Package "RESTServer" already exists and tool(s) in it will not be loaded
  49.  
  50. Package "SurfaceCap" already exists and tool(s) in it will not be loaded
  51.  
  52. Package "VolumePath" already exists and tool(s) in it will not be loaded
  53.  
  54. Package "SurfaceAreaVolume" already exists and tool(s) in it will not be loaded
  55.  
  56. Package "ConstrainedMove" already exists and tool(s) in it will not be loaded
  57.  
  58. Package "Rotamers" already exists and tool(s) in it will not be loaded
  59.  
  60. Package "PipesAndPlanks" already exists and tool(s) in it will not be loaded
  61.  
  62. Package "Addions" already exists and tool(s) in it will not be loaded
  63.  
  64. Package "VolumeMenu" already exists and tool(s) in it will not be loaded
  65.  
  66. Package "DelphiViewer" already exists and tool(s) in it will not be loaded
  67.  
  68. Package "Intersurf" already exists and tool(s) in it will not be loaded
  69.  
  70. Package "apbs" already exists and tool(s) in it will not be loaded
  71.  
  72. Package "MultiFit" already exists and tool(s) in it will not be loaded
  73.  
  74. Package "FlattenIcosahedron" already exists and tool(s) in it will not be loaded
  75.  
  76. Package "NucleicAcids" already exists and tool(s) in it will not be loaded
  77.  
  78. Package "Movie" already exists and tool(s) in it will not be loaded
  79.  
  80. Package "MultiScale" already exists and tool(s) in it will not be loaded
  81.  
  82. Package "Morph" already exists and tool(s) in it will not be loaded
  83.  
  84. Package "CageBuilder" already exists and tool(s) in it will not be loaded
  85.  
  86. Package "MultAlignViewer" already exists and tool(s) in it will not be loaded
  87.  
  88. Package "VolumeStatistics" already exists and tool(s) in it will not be loaded
  89.  
  90. Package "ScaleBar" already exists and tool(s) in it will not be loaded
  91.  
  92. Package "PBReader" already exists and tool(s) in it will not be loaded
  93.  
  94. Package "UndoMove" already exists and tool(s) in it will not be loaded
  95.  
  96. Package "VolumeEraser" already exists and tool(s) in it will not be loaded
  97.  
  98. Package "Icosahedron" already exists and tool(s) in it will not be loaded
  99.  
  100. Package "StructSeqAlign" already exists and tool(s) in it will not be loaded
  101.  
  102. Package "Aniso" already exists and tool(s) in it will not be loaded
  103.  
  104. Package "MorphMap" already exists and tool(s) in it will not be loaded
  105.  
  106. Package "SAXS" already exists and tool(s) in it will not be loaded
  107.  
  108. Package "FitMap" already exists and tool(s) in it will not be loaded
  109.  
  110. Package "vina" already exists and tool(s) in it will not be loaded
  111.  
  112. Package "Animate" already exists and tool(s) in it will not be loaded
  113.  
  114. Package "VolumeViewer" already exists and tool(s) in it will not be loaded
  115.  
  116. Package "DockPrep" already exists and tool(s) in it will not be loaded
  117.  
  118. Package "PickBlobs" already exists and tool(s) in it will not be loaded
  119.  
  120. Package "ViewDock" already exists and tool(s) in it will not be loaded
  121.  
  122. Package "WriteDMS" already exists and tool(s) in it will not be loaded
  123.  
  124. Package "VolumeFilter" already exists and tool(s) in it will not be loaded
  125.  
  126. Package "Demo" already exists and tool(s) in it will not be loaded
  127.  
  128. Package "ReadStdin" already exists and tool(s) in it will not be loaded
  129.  
  130. Package "MeasureVolume" already exists and tool(s) in it will not be loaded
  131.  
  132. Package "CalcAttr" already exists and tool(s) in it will not be loaded
  133.  
  134. Package "ModelClip" already exists and tool(s) in it will not be loaded
  135.  
  136. Package "DetectClash" already exists and tool(s) in it will not be loaded
  137.  
  138. Package "Accelerators" already exists and tool(s) in it will not be loaded
  139.  
  140. Package "blastpdb" already exists and tool(s) in it will not be loaded
  141.  
  142. Package "MinrmsPlot" already exists and tool(s) in it will not be loaded
  143.  
  144. Package "AtomDensity" already exists and tool(s) in it will not be loaded
  145.  
  146. Package "EnsembleMatch" already exists and tool(s) in it will not be loaded
  147.  
  148. Package "Shiny" already exists and tool(s) in it will not be loaded
  149.  
  150. Package "MMMD" already exists and tool(s) in it will not be loaded
  151.  
  152. Package "ColorSS" already exists and tool(s) in it will not be loaded
  153.  
  154. Package "MetalGeom" already exists and tool(s) in it will not be loaded
  155.  
  156. Package "AddH" already exists and tool(s) in it will not be loaded
  157.  
  158. Package "MoleculeTransform" already exists and tool(s) in it will not be loaded
  159.  
  160. Package "HideDust" already exists and tool(s) in it will not be loaded
  161.  
  162. Package "Notepad" already exists and tool(s) in it will not be loaded
  163.  
  164. Package "AddAttr" already exists and tool(s) in it will not be loaded
  165.  
  166. Package "ModelLoops" already exists and tool(s) in it will not be loaded
  167.  
  168. Package "Benchmark" already exists and tool(s) in it will not be loaded
  169.  
  170. Error while importing Ramachandran from /opt/UCSF/Chimera64-1.10.2/share:
  171. Traceback (most recent call last):
  172.   File "/opt/UCSF/Chimera64-1.10.2/share/chimera/extension/base.py", line 349, in _importExtension
  173.     __import__(module)
  174.   File "/opt/UCSF/Chimera64-1.10.2/share/Ramachandran/ChimeraExtension.py", line 29, in <module>
  175.     ModelPanel.addButton("Ramachandran plot...", emo.modelPanelCB)
  176.   File "/opt/UCSF/Chimera64-1.10.2/share/ModelPanel/base.py", line 40, in addButton
  177.     "Button named '%s' already exists" % name
  178. KeyError: "Button named 'Ramachandran plot...' already exists"
  179.  
  180. Package "pdb2pqr" already exists and tool(s) in it will not be loaded
  181.  
  182. Package "Surfnet" already exists and tool(s) in it will not be loaded
  183.  
  184. Package "SurfaceColor" already exists and tool(s) in it will not be loaded
  185.  
  186. Package "ModelPanel" already exists and tool(s) in it will not be loaded
  187.  
  188. Package "SurfaceZone" already exists and tool(s) in it will not be loaded
  189.  
  190. Package "ESP" already exists and tool(s) in it will not be loaded
  191.  
  192. Package "FindHBond" already exists and tool(s) in it will not be loaded
  193.  
  194. Package "MovieRecorder" already exists and tool(s) in it will not be loaded
  195.  
  196. Package "SeqAnnotations" already exists and tool(s) in it will not be loaded
  197.  
  198. Package "Idle" already exists and tool(s) in it will not be loaded
  199.  
  200. Package "WritePrmtop" already exists and tool(s) in it will not be loaded
  201.  
  202. Package "ColorZone" already exists and tool(s) in it will not be loaded
  203.  
  204. Package "StructureDiagram" already exists and tool(s) in it will not be loaded
  205.  
  206. > start RESTServer
  207. Starting extension 'RESTServer' failed
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement