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Jan 17th, 2018
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  1. text = 'AGCTGATCGC'
  2. def melt_t(seq):
  3. base = ['A', 'T', 'C' 'G']
  4. seq = list(text)
  5. seq_added=''
  6.  
  7. TomaszWpierdol=len(text)
  8.  
  9. for base in seq:
  10. for A in text:
  11. resultA = seq.count('A')
  12. for T in text:
  13. resultT = seq.count('T')
  14. for C in text:
  15. resultC = seq.count('C')
  16. for G in text:
  17. resultG = seq.count('G')
  18. seq_added = (resultA + resultT)*2 + (resultC + resultG)*4
  19.  
  20.  
  21. if (TomaszWpierdol > 13):
  22. seq_added = (64.9+41*((resultG+resultC-16.4)/(resultA+resultT+resultG+resultC)))
  23.  
  24. print('Melting Temperature is {}'.format(seq_added))
  25. return seq_added;
  26. melt_t(text)
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