ga4gh_repo init --force registry.db
ga4gh_repo add-dataset registry.db 1kgenomes \
  --description "Variants from the 1000 Genomes project"
ga4gh_repo add-referenceset registry.db hs37d5.fa.gz \
  -d "GRCh37 assembly of the human genome" --name GRCh37 \
  --sourceUri "ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/reference/phase2_reference_assembly_sequence/hs37d5.fa.gz"
ga4gh_repo add-ontology registry.db so-xp-dec.obo -n so-xp
ga4gh_repo add-variantset registry.db 1kgenomes /data/ --name phase3-release \
  --referenceSetName GRCh37