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misnomer001

Parsi guj + dinkha pass

misnomer001
Dec 24th, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: parsifstats.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. ## qpAdm version: 1520
  9. seed: 653843235
  10. *** recommended that inbreed be explicitly set ***
  11. inbreed set NO
  12.  
  13. left pops:
  14. India_Parsi
  15. GIH.DG
  16. Iran_DinkhaTepe_BA_IA_1
  17. Iran_DinkhaTepe_BA_IA_2
  18.  
  19. right pops:
  20. Mbuti.DG
  21. CHG
  22. EHG
  23. PPNB
  24. Turkey_N
  25. Iran_GanjDareh_N
  26. Serbia_IronGates_Mesolithic
  27. China_Xinjiang_Xiaohe_BA
  28. BIR.SG
  29. Russia_MLBA_Sintashta
  30. Tajikistan_C_Sarazm
  31. Iran_Hasanlu_IA
  32. Uzbekistan_Bustan_BA
  33. Tajikistan_BA_DashtiKozy
  34. Iran_Hasanlu_LBA_A
  35.  
  36. codimension 1
  37. f4info:
  38. f4rank: 2 dof: 12 chisq: 16.945 tail: 0.151686092 dofdiff: 14 chisqdiff: -16.945 taildiff: 1
  39. B:
  40. scale 1.000 1.000
  41. CHG 0.792 0.720
  42. EHG 0.167 1.278
  43. PPNB 1.765 -1.589
  44. Turkey_N 1.659 -1.516
  45. Iran_GanjDareh_N 0.706 1.163
  46. Serbia_IronGates_Mesolithic 0.707 -0.127
  47. China_Xinjiang_Xiaohe_BA -0.459 1.966
  48. BIR.SG -1.502 -0.025
  49. Russia_MLBA_Sintashta 0.830 0.203
  50. Tajikistan_C_Sarazm 0.446 1.113
  51. Iran_Hasanlu_IA 1.163 -0.147
  52. Uzbekistan_Bustan_BA 0.730 0.627
  53. Tajikistan_BA_DashtiKozy 0.812 0.269
  54. Iran_Hasanlu_LBA_A 0.761 0.145
  55. A:
  56. scale 512.384 2695.203
  57. GIH.DG -1.202 0.146
  58. Iran_DinkhaTepe_BA_IA_1 0.959 -1.145
  59. Iran_DinkhaTepe_BA_IA_2 0.798 1.292
  60.  
  61.  
  62. full rank
  63. f4info:
  64. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 12 chisqdiff: 16.945 taildiff: 0.151686092
  65. B:
  66. scale 406.383 519.077 658.946
  67. CHG -0.916 0.315 0.843
  68. EHG -0.203 -0.259 0.592
  69. PPNB -1.736 2.053 1.378
  70. Turkey_N -1.676 1.814 1.232
  71. Iran_GanjDareh_N -0.666 0.385 1.165
  72. Serbia_IronGates_Mesolithic -0.754 0.572 0.671
  73. China_Xinjiang_Xiaohe_BA 0.423 -1.025 0.182
  74. BIR.SG 1.366 -1.595 -1.548
  75. Russia_MLBA_Sintashta -0.872 0.602 0.879
  76. Tajikistan_C_Sarazm -0.398 0.117 0.909
  77. Iran_Hasanlu_IA -1.187 1.024 1.123
  78. Uzbekistan_Bustan_BA -0.751 0.442 0.942
  79. Tajikistan_BA_DashtiKozy -0.817 0.620 0.941
  80. Iran_Hasanlu_LBA_A -0.823 0.507 0.805
  81. A:
  82. scale 1.732 1.732 1.732
  83. GIH.DG 1.732 0.000 0.000
  84. Iran_DinkhaTepe_BA_IA_1 0.000 1.732 0.000
  85. Iran_DinkhaTepe_BA_IA_2 0.000 0.000 1.732
  86.  
  87.  
  88. best coefficients: 0.426 0.330 0.244
  89. totmean: 0.426 0.330 0.244
  90. boot mean: 0.426 0.330 0.244
  91. std. errors: 0.012 0.042 0.050
  92.  
  93. error covariance (* 1,000,000)
  94. 145 278 -423
  95. 278 1772 -2050
  96. -423 -2050 2473
  97.  
  98.  
  99. summ: India_Parsi 3 0.151686 0.426 0.330 0.244 145 278 -423 1772 -2050 ...
  100. 2473
  101.  
  102. fixed pat wt dof chisq tail prob
  103. 000 0 12 16.945 0.151686 0.426 0.330 0.244
  104. 001 1 13 45.424 1.77791e-05 0.467 0.533 0.000
  105. 010 1 13 78.740 1.90326e-11 0.375 0.000 0.625
  106. 100 1 13 376.695 0 0.000 -1.743 2.743 infeasible
  107. 011 2 14 2408.776 0 1.000 0.000 0.000
  108. 101 2 14 1682.473 0 0.000 1.000 0.000
  109. 110 2 14 900.778 0 0.000 0.000 1.000
  110. best pat: 000 0.151686 - -
  111. best pat: 001 1.77791e-05 chi(nested): 28.479 p-value for nested model: 9.47184e-08
  112. best pat: 110 2.94188e-183 not nested
  113.  
  114. coeffs: 0.426 0.330 0.244
  115.  
  116. ## dscore:: f_4(Base, Fit, Rbase, right2)
  117. ## genstat:: f_4(Base, Fit, right1, right2)
  118.  
  119. details: GIH.DG CHG -0.002254 -11.937640
  120. details: Iran_DinkhaTepe_BA_IA_1 CHG 0.000606 2.603939
  121. details: Iran_DinkhaTepe_BA_IA_2 CHG 0.001280 6.100780
  122. dscore: CHG f4: -0.000446 Z: -2.650159
  123.  
  124. details: GIH.DG EHG -0.000499 -2.855969
  125. details: Iran_DinkhaTepe_BA_IA_1 EHG -0.000499 -2.181131
  126. details: Iran_DinkhaTepe_BA_IA_2 EHG 0.000899 4.559898
  127. dscore: EHG f4: -0.000157 Z: -1.001532
  128.  
  129. details: GIH.DG PPNB -0.004272 -24.919772
  130. details: Iran_DinkhaTepe_BA_IA_1 PPNB 0.003955 18.221835
  131. details: Iran_DinkhaTepe_BA_IA_2 PPNB 0.002092 10.396087
  132. dscore: PPNB f4: -0.000002 Z: -0.014476
  133.  
  134. details: GIH.DG Turkey_N -0.004125 -28.576379
  135. details: Iran_DinkhaTepe_BA_IA_1 Turkey_N 0.003495 19.985356
  136. details: Iran_DinkhaTepe_BA_IA_2 Turkey_N 0.001870 11.725424
  137. dscore: Turkey_N f4: -0.000146 Z: -1.172284
  138.  
  139. details: GIH.DG Iran_GanjDareh_N -0.001638 -10.788388
  140. details: Iran_DinkhaTepe_BA_IA_1 Iran_GanjDareh_N 0.000741 3.874489
  141. details: Iran_DinkhaTepe_BA_IA_2 Iran_GanjDareh_N 0.001769 10.398647
  142. dscore: Iran_GanjDareh_N f4: -0.000020 Z: -0.150324
  143.  
  144. details: GIH.DG Serbia_IronGates_Mesolithic -0.001855 -11.857450
  145. details: Iran_DinkhaTepe_BA_IA_1 Serbia_IronGates_Mesolithic 0.001102 5.629891
  146. details: Iran_DinkhaTepe_BA_IA_2 Serbia_IronGates_Mesolithic 0.001019 5.811503
  147. dscore: Serbia_IronGates_Mesolithic f4: -0.000177 Z: -1.309475
  148.  
  149. details: GIH.DG China_Xinjiang_Xiaohe_BA 0.001040 5.782430
  150. details: Iran_DinkhaTepe_BA_IA_1 China_Xinjiang_Xiaohe_BA -0.001975 -8.247323
  151. details: Iran_DinkhaTepe_BA_IA_2 China_Xinjiang_Xiaohe_BA 0.000276 1.356133
  152. dscore: China_Xinjiang_Xiaohe_BA f4: -0.000141 Z: -0.861750
  153.  
  154. details: GIH.DG BIR.SG 0.003362 22.470493
  155. details: Iran_DinkhaTepe_BA_IA_1 BIR.SG -0.003072 -16.900569
  156. details: Iran_DinkhaTepe_BA_IA_2 BIR.SG -0.002349 -14.561605
  157. dscore: BIR.SG f4: -0.000157 Z: -1.230844
  158.  
  159. details: GIH.DG Russia_MLBA_Sintashta -0.002146 -15.681895
  160. details: Iran_DinkhaTepe_BA_IA_1 Russia_MLBA_Sintashta 0.001159 6.808489
  161. details: Iran_DinkhaTepe_BA_IA_2 Russia_MLBA_Sintashta 0.001334 8.903738
  162. dscore: Russia_MLBA_Sintashta f4: -0.000205 Z: -1.720478
  163.  
  164. details: GIH.DG Tajikistan_C_Sarazm -0.000980 -5.118764
  165. details: Iran_DinkhaTepe_BA_IA_1 Tajikistan_C_Sarazm 0.000224 0.973382
  166. details: Iran_DinkhaTepe_BA_IA_2 Tajikistan_C_Sarazm 0.001380 6.680691
  167. dscore: Tajikistan_C_Sarazm f4: -0.000006 Z: -0.035080
  168.  
  169. details: GIH.DG Iran_Hasanlu_IA -0.002921 -22.000686
  170. details: Iran_DinkhaTepe_BA_IA_1 Iran_Hasanlu_IA 0.001972 11.961078
  171. details: Iran_DinkhaTepe_BA_IA_2 Iran_Hasanlu_IA 0.001705 12.137505
  172. dscore: Iran_Hasanlu_IA f4: -0.000176 Z: -1.542474
  173.  
  174. details: GIH.DG Uzbekistan_Bustan_BA -0.001849 -11.869020
  175. details: Iran_DinkhaTepe_BA_IA_1 Uzbekistan_Bustan_BA 0.000852 4.527793
  176. details: Iran_DinkhaTepe_BA_IA_2 Uzbekistan_Bustan_BA 0.001430 8.057519
  177. dscore: Uzbekistan_Bustan_BA f4: -0.000156 Z: -1.117423
  178.  
  179. details: GIH.DG Tajikistan_BA_DashtiKozy -0.002011 -12.170494
  180. details: Iran_DinkhaTepe_BA_IA_1 Tajikistan_BA_DashtiKozy 0.001194 6.119342
  181. details: Iran_DinkhaTepe_BA_IA_2 Tajikistan_BA_DashtiKozy 0.001429 7.810342
  182. dscore: Tajikistan_BA_DashtiKozy f4: -0.000113 Z: -0.779894
  183.  
  184. details: GIH.DG Iran_Hasanlu_LBA_A -0.002026 -9.400011
  185. details: Iran_DinkhaTepe_BA_IA_1 Iran_Hasanlu_LBA_A 0.000976 3.878818
  186. details: Iran_DinkhaTepe_BA_IA_2 Iran_Hasanlu_LBA_A 0.001222 5.491348
  187. dscore: Iran_Hasanlu_LBA_A f4: -0.000242 Z: -1.295647
  188.  
  189. gendstat: Mbuti.DG CHG -2.650
  190. gendstat: Mbuti.DG EHG -1.002
  191. gendstat: Mbuti.DG PPNB -0.014
  192. gendstat: Mbuti.DG Turkey_N -1.172
  193. gendstat: Mbuti.DG Iran_GanjDareh_N -0.150
  194. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic -1.309
  195. gendstat: Mbuti.DG China_Xinjiang_Xiaohe_BA -0.862
  196. gendstat: Mbuti.DG BIR.SG -1.231
  197. gendstat: Mbuti.DG Russia_MLBA_Sintashta -1.720
  198. gendstat: Mbuti.DG Tajikistan_C_Sarazm -0.035
  199. gendstat: Mbuti.DG Iran_Hasanlu_IA -1.542
  200. gendstat: Mbuti.DG Uzbekistan_Bustan_BA -1.117
  201. gendstat: Mbuti.DG Tajikistan_BA_DashtiKozy -0.780
  202. gendstat: Mbuti.DG Iran_Hasanlu_LBA_A -1.296
  203. gendstat: CHG EHG 1.612
  204. gendstat: CHG PPNB 2.369
  205. gendstat: CHG Turkey_N 1.927
  206. gendstat: CHG Iran_GanjDareh_N 2.617
  207. gendstat: CHG Serbia_IronGates_Mesolithic 1.736
  208. gendstat: CHG China_Xinjiang_Xiaohe_BA 1.659
  209. gendstat: CHG BIR.SG 1.711
  210. gendstat: CHG Russia_MLBA_Sintashta 1.702
  211. gendstat: CHG Tajikistan_C_Sarazm 2.408
  212. gendstat: CHG Iran_Hasanlu_IA 1.918
  213. gendstat: CHG Uzbekistan_Bustan_BA 1.874
  214. gendstat: CHG Tajikistan_BA_DashtiKozy 2.083
  215. gendstat: CHG Iran_Hasanlu_LBA_A 1.058
  216. gendstat: EHG PPNB 0.888
  217. gendstat: EHG Turkey_N 0.083
  218. gendstat: EHG Iran_GanjDareh_N 0.877
  219. gendstat: EHG Serbia_IronGates_Mesolithic -0.163
  220. gendstat: EHG China_Xinjiang_Xiaohe_BA 0.112
  221. gendstat: EHG BIR.SG 0.003
  222. gendstat: EHG Russia_MLBA_Sintashta -0.406
  223. gendstat: EHG Tajikistan_C_Sarazm 0.905
  224. gendstat: EHG Iran_Hasanlu_IA -0.144
  225. gendstat: EHG Uzbekistan_Bustan_BA 0.007
  226. gendstat: EHG Tajikistan_BA_DashtiKozy 0.319
  227. gendstat: EHG Iran_Hasanlu_LBA_A -0.444
  228. gendstat: PPNB Turkey_N -1.162
  229. gendstat: PPNB Iran_GanjDareh_N -0.108
  230. gendstat: PPNB Serbia_IronGates_Mesolithic -1.186
  231. gendstat: PPNB China_Xinjiang_Xiaohe_BA -0.731
  232. gendstat: PPNB BIR.SG -0.931
  233. gendstat: PPNB Russia_MLBA_Sintashta -1.497
  234. gendstat: PPNB Tajikistan_C_Sarazm -0.020
  235. gendstat: PPNB Iran_Hasanlu_IA -1.349
  236. gendstat: PPNB Uzbekistan_Bustan_BA -0.962
  237. gendstat: PPNB Tajikistan_BA_DashtiKozy -0.675
  238. gendstat: PPNB Iran_Hasanlu_LBA_A -1.190
  239. gendstat: Turkey_N Iran_GanjDareh_N 0.981
  240. gendstat: Turkey_N Serbia_IronGates_Mesolithic -0.323
  241. gendstat: Turkey_N China_Xinjiang_Xiaohe_BA 0.029
  242. gendstat: Turkey_N BIR.SG -0.085
  243. gendstat: Turkey_N Russia_MLBA_Sintashta -0.705
  244. gendstat: Turkey_N Tajikistan_C_Sarazm 0.917
  245. gendstat: Turkey_N Iran_Hasanlu_IA -0.405
  246. gendstat: Turkey_N Uzbekistan_Bustan_BA -0.089
  247. gendstat: Turkey_N Tajikistan_BA_DashtiKozy 0.284
  248. gendstat: Turkey_N Iran_Hasanlu_LBA_A -0.566
  249. gendstat: Iran_GanjDareh_N Serbia_IronGates_Mesolithic -1.177
  250. gendstat: Iran_GanjDareh_N China_Xinjiang_Xiaohe_BA -0.736
  251. gendstat: Iran_GanjDareh_N BIR.SG -0.970
  252. gendstat: Iran_GanjDareh_N Russia_MLBA_Sintashta -1.561
  253. gendstat: Iran_GanjDareh_N Tajikistan_C_Sarazm 0.095
  254. gendstat: Iran_GanjDareh_N Iran_Hasanlu_IA -1.438
  255. gendstat: Iran_GanjDareh_N Uzbekistan_Bustan_BA -1.103
  256. gendstat: Iran_GanjDareh_N Tajikistan_BA_DashtiKozy -0.643
  257. gendstat: Iran_GanjDareh_N Iran_Hasanlu_LBA_A -1.266
  258. gendstat: Serbia_IronGates_Mesolithic China_Xinjiang_Xiaohe_BA 0.242
  259. gendstat: Serbia_IronGates_Mesolithic BIR.SG 0.156
  260. gendstat: Serbia_IronGates_Mesolithic Russia_MLBA_Sintashta -0.341
  261. gendstat: Serbia_IronGates_Mesolithic Tajikistan_C_Sarazm 1.093
  262. gendstat: Serbia_IronGates_Mesolithic Iran_Hasanlu_IA 0.014
  263. gendstat: Serbia_IronGates_Mesolithic Uzbekistan_Bustan_BA 0.165
  264. gendstat: Serbia_IronGates_Mesolithic Tajikistan_BA_DashtiKozy 0.547
  265. gendstat: Serbia_IronGates_Mesolithic Iran_Hasanlu_LBA_A -0.360
  266. gendstat: China_Xinjiang_Xiaohe_BA BIR.SG -0.107
  267. gendstat: China_Xinjiang_Xiaohe_BA Russia_MLBA_Sintashta -0.486
  268. gendstat: China_Xinjiang_Xiaohe_BA Tajikistan_C_Sarazm 0.785
  269. gendstat: China_Xinjiang_Xiaohe_BA Iran_Hasanlu_IA -0.243
  270. gendstat: China_Xinjiang_Xiaohe_BA Uzbekistan_Bustan_BA -0.096
  271. gendstat: China_Xinjiang_Xiaohe_BA Tajikistan_BA_DashtiKozy 0.191
  272. gendstat: China_Xinjiang_Xiaohe_BA Iran_Hasanlu_LBA_A -0.521
  273. gendstat: BIR.SG Russia_MLBA_Sintashta -0.425
  274. gendstat: BIR.SG Tajikistan_C_Sarazm 0.937
  275. gendstat: BIR.SG Iran_Hasanlu_IA -0.166
  276. gendstat: BIR.SG Uzbekistan_Bustan_BA 0.004
  277. gendstat: BIR.SG Tajikistan_BA_DashtiKozy 0.315
  278. gendstat: BIR.SG Iran_Hasanlu_LBA_A -0.477
  279. gendstat: Russia_MLBA_Sintashta Tajikistan_C_Sarazm 1.427
  280. gendstat: Russia_MLBA_Sintashta Iran_Hasanlu_IA 0.404
  281. gendstat: Russia_MLBA_Sintashta Uzbekistan_Bustan_BA 0.468
  282. gendstat: Russia_MLBA_Sintashta Tajikistan_BA_DashtiKozy 0.896
  283. gendstat: Russia_MLBA_Sintashta Iran_Hasanlu_LBA_A -0.230
  284. gendstat: Tajikistan_C_Sarazm Iran_Hasanlu_IA -1.235
  285. gendstat: Tajikistan_C_Sarazm Uzbekistan_Bustan_BA -1.003
  286. gendstat: Tajikistan_C_Sarazm Tajikistan_BA_DashtiKozy -0.670
  287. gendstat: Tajikistan_C_Sarazm Iran_Hasanlu_LBA_A -1.221
  288. gendstat: Iran_Hasanlu_IA Uzbekistan_Bustan_BA 0.198
  289. gendstat: Iran_Hasanlu_IA Tajikistan_BA_DashtiKozy 0.573
  290. gendstat: Iran_Hasanlu_IA Iran_Hasanlu_LBA_A -0.414
  291. gendstat: Uzbekistan_Bustan_BA Tajikistan_BA_DashtiKozy 0.332
  292. gendstat: Uzbekistan_Bustan_BA Iran_Hasanlu_LBA_A -0.504
  293. gendstat: Tajikistan_BA_DashtiKozy Iran_Hasanlu_LBA_A -0.706
  294.  
  295. ##end of qpAdm: 8.268 seconds cpu 1.200 Mbytes in use
  296.  
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