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- allsnps: YES
- ## qpAdm version: 810
- seed: 1839076889
- left pops:
- Caucasus_Eneolithic
- Georgia_Kotias.SG
- Geoksyur_EN
- Anatolia_N
- right pops:
- Sarazm_EN
- Mbuti.DG
- USA_WA_Kennewick.SG
- Morocco_Iberomaurusian
- Kazakhstan_Botai.SG
- Ganj_Dareh_N
- PPN
- Natufian
- Iberia_MN
- Russia_MA1.SG
- Georgia_Satsurblia.SG
- Kostenki14.SG
- EEHG
- WEHG
- WSHG
- Onge.DG
- Russia_Shamanka_EN.SG
- Ethiopia_4500BP.SG
- 0 Caucasus_Eneolithic 3
- 1 Georgia_Kotias.SG 1
- 2 Geoksyur_EN 21
- 3 Anatolia_N 22
- 4 Sarazm_EN 2
- 5 Mbuti.DG 5
- 6 USA_WA_Kennewick.SG 1
- 7 Morocco_Iberomaurusian 6
- 8 Kazakhstan_Botai.SG 3
- 9 Ganj_Dareh_N 7
- 10 PPN 8
- 11 Natufian 6
- 12 Iberia_MN 4
- 13 Russia_MA1.SG 1
- 14 Georgia_Satsurblia.SG 1
- 15 Kostenki14.SG 1
- 16 EEHG 4
- 17 WEHG 36
- 18 WSHG 3
- 19 Onge.DG 2
- 20 Russia_Shamanka_EN.SG 10
- 21 Ethiopia_4500BP.SG 1
- jackknife block size: 0.050
- snps: 1150536 indivs: 148
- number of blocks for block jackknife: 552
- ## ncols: 1150536
- coverage: Caucasus_Eneolithic 784983
- coverage: Georgia_Kotias.SG 1149097
- coverage: Geoksyur_EN 1018577
- coverage: Anatolia_N 1134099
- coverage: Sarazm_EN 867960
- coverage: Mbuti.DG 1150376
- coverage: USA_WA_Kennewick.SG 640773
- coverage: Morocco_Iberomaurusian 1101342
- coverage: Kazakhstan_Botai.SG 1149870
- coverage: Ganj_Dareh_N 1029695
- coverage: PPN 835499
- coverage: Natufian 535079
- coverage: Iberia_MN 967760
- coverage: Russia_MA1.SG 805960
- coverage: Georgia_Satsurblia.SG 801311
- coverage: Kostenki14.SG 1048972
- coverage: EEHG 1029995
- coverage: WEHG 1141246
- coverage: WSHG 858019
- coverage: Onge.DG 1120748
- coverage: Russia_Shamanka_EN.SG 1149998
- coverage: Ethiopia_4500BP.SG 1149598
- dof (jackknife): 463.348
- numsnps used: 1150536
- codimension 1
- f4info:
- f4rank: 2 dof: 15 chisq: 24.162 tail: 0.0623888069 dofdiff: 17 chisqdiff: -24.162 taildiff: 1
- B:
- scale 1.000 1.000
- Mbuti.DG 0.729 0.196
- USA_WA_Kennewick.SG 0.289 0.096
- Morocco_Iberomaurusian 1.267 -0.264
- Kazakhstan_Botai.SG 0.279 0.082
- Ganj_Dareh_N -0.183 0.031
- PPN 1.911 -1.353
- Natufian 1.491 -0.824
- Iberia_MN 1.983 -0.975
- Russia_MA1.SG 0.296 0.101
- Georgia_Satsurblia.SG 0.063 3.626
- Kostenki14.SG 0.977 0.022
- EEHG 0.651 0.280
- WEHG 1.445 -0.033
- WSHG 0.227 -0.096
- Onge.DG 0.584 0.113
- Russia_Shamanka_EN.SG 0.588 0.346
- Ethiopia_4500BP.SG 0.751 0.186
- A:
- scale 475.301 1340.197
- Georgia_Kotias.SG -0.345 1.207
- Geoksyur_EN -1.160 -1.018
- Anatolia_N 1.239 -0.713
- full rank
- f4info:
- f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 15 chisqdiff: 24.162 taildiff: 0.0623888069
- B:
- scale 1.000 1.000 1.000
- Mbuti.DG 0.724 0.196 -0.129
- USA_WA_Kennewick.SG 0.291 0.083 1.217
- Morocco_Iberomaurusian 1.266 -0.309 -0.162
- Kazakhstan_Botai.SG 0.277 0.078 0.480
- Ganj_Dareh_N -0.176 0.067 0.933
- PPN 1.927 -1.398 0.017
- Natufian 1.499 -0.871 -0.375
- Iberia_MN 1.991 -1.022 0.976
- Russia_MA1.SG 0.292 0.118 0.761
- Georgia_Satsurblia.SG -0.017 3.582 -0.095
- Kostenki14.SG 0.972 0.009 -0.135
- EEHG 0.639 0.267 -1.553
- WEHG 1.433 -0.070 -2.052
- WSHG 0.229 -0.085 0.329
- Onge.DG 0.576 0.115 -0.297
- Russia_Shamanka_EN.SG 0.575 0.343 2.398
- Ethiopia_4500BP.SG 0.742 0.185 -0.324
- A:
- scale 471.159 1334.763 5311.203
- Georgia_Kotias.SG -0.258 1.287 1.212
- Geoksyur_EN -1.126 -1.029 0.825
- Anatolia_N 1.291 -0.535 0.921
- best coefficients: 0.410 0.246 0.344
- Jackknife mean: 0.407551728 0.248282115 0.344166157
- std. errors: 0.052 0.051 0.022
- error covariance (* 1000000)
- 2715 -2441 -274
- -2441 2636 -194
- -274 -194 468
- summ: Caucasus_Eneolithic 3 0.062389 0.408 0.248 0.344 2715 -2441 -274 2636 -194 468
- fixed pat wt dof chisq tail prob
- 000 0 15 24.162 0.0623888 0.410 0.246 0.344
- 001 1 16 383.342 0 4.667 -3.667 0.000 infeasible
- 010 1 16 52.695 8.45296e-06 0.635 -0.000 0.365
- 100 1 16 103.559 7.4253e-15 0.000 0.624 0.376
- 011 2 17 213.769 0 1.000 -0.000 0.000
- 101 2 17 367.734 0 0.000 1.000 0.000
- 110 2 17 752.469 0 0.000 -0.000 1.000
- best pat: 000 0.0623888 - -
- best pat: 010 8.45296e-06 chi(nested): 28.533 p-value for nested model: 9.21052e-08
- best pat: 011 4.8041e-36 chi(nested): 161.073 p-value for nested model: 6.59357e-37
- coeffs: 0.410 0.246 0.344
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: Georgia_Kotias.SG Mbuti.DG 0.000069 0.157166
- details: Geoksyur_EN Mbuti.DG -0.001744 -5.235198
- details: Anatolia_N Mbuti.DG 0.002232 6.722407
- dscore: Mbuti.DG f4: 0.000368 Z: 1.117510
- details: Georgia_Kotias.SG USA_WA_Kennewick.SG 0.000513 1.564245
- details: Geoksyur_EN USA_WA_Kennewick.SG -0.000306 -1.046171
- details: Anatolia_N USA_WA_Kennewick.SG 0.001405 4.516062
- dscore: USA_WA_Kennewick.SG f4: 0.000619 Z: 2.319463
- details: Georgia_Kotias.SG Morocco_Iberomaurusian -0.000761 -1.660770
- details: Geoksyur_EN Morocco_Iberomaurusian -0.002603 -7.295982
- details: Anatolia_N Morocco_Iberomaurusian 0.003946 10.901270
- dscore: Morocco_Iberomaurusian f4: 0.000405 Z: 1.158110
- details: Georgia_Kotias.SG Kazakhstan_Botai.SG 0.000413 1.023098
- details: Geoksyur_EN Kazakhstan_Botai.SG -0.000318 -0.937069
- details: Anatolia_N Kazakhstan_Botai.SG 0.001268 3.728957
- dscore: Kazakhstan_Botai.SG f4: 0.000528 Z: 1.637528
- details: Georgia_Kotias.SG Ganj_Dareh_N 0.000741 1.906626
- details: Geoksyur_EN Ganj_Dareh_N 0.000734 2.421594
- details: Anatolia_N Ganj_Dareh_N 0.000049 0.158754
- dscore: Ganj_Dareh_N f4: 0.000501 Z: 1.697676
- details: Georgia_Kotias.SG PPN -0.002039 -4.905820
- details: Geoksyur_EN PPN -0.003251 -9.514460
- details: Anatolia_N PPN 0.006217 17.183945
- dscore: PPN f4: 0.000503 Z: 1.498612
- details: Georgia_Kotias.SG Natufian -0.001544 -4.239712
- details: Geoksyur_EN Natufian -0.002779 -8.363205
- details: Anatolia_N Natufian 0.004711 13.359207
- dscore: Natufian f4: 0.000304 Z: 0.978394
- details: Georgia_Kotias.SG Iberia_MN -0.001577 -3.845418
- details: Geoksyur_EN Iberia_MN -0.003669 -10.783378
- details: Anatolia_N Iberia_MN 0.006304 18.055705
- dscore: Iberia_MN f4: 0.000620 Z: 1.898902
- details: Georgia_Kotias.SG Russia_MA1.SG 0.000479 1.136259
- details: Geoksyur_EN Russia_MA1.SG -0.000398 -1.156675
- details: Anatolia_N Russia_MA1.SG 0.001307 3.428684
- dscore: Russia_MA1.SG f4: 0.000548 Z: 1.629786
- details: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.003769 7.519902
- details: Geoksyur_EN Georgia_Satsurblia.SG -0.002566 -7.239058
- details: Anatolia_N Georgia_Satsurblia.SG -0.001200 -3.114699
- dscore: Georgia_Satsurblia.SG f4: 0.000505 Z: 1.360268
- details: Georgia_Kotias.SG Kostenki14.SG -0.000359 -0.738053
- details: Geoksyur_EN Kostenki14.SG -0.002198 -5.678491
- details: Anatolia_N Kostenki14.SG 0.002915 7.543188
- dscore: Kostenki14.SG f4: 0.000315 Z: 0.842740
- details: Georgia_Kotias.SG EEHG -0.000335 -0.755055
- details: Geoksyur_EN EEHG -0.001846 -5.012026
- details: Anatolia_N EEHG 0.001613 4.463315
- dscore: EEHG f4: -0.000036 Z: -0.104993
- details: Georgia_Kotias.SG WEHG -0.000984 -2.303950
- details: Geoksyur_EN WEHG -0.003418 -9.746402
- details: Anatolia_N WEHG 0.003993 11.475559
- dscore: WEHG f4: 0.000130 Z: 0.388370
- details: Georgia_Kotias.SG WSHG 0.000186 0.439165
- details: Geoksyur_EN WSHG -0.000189 -0.568968
- details: Anatolia_N WSHG 0.001067 3.027997
- dscore: WSHG f4: 0.000397 Z: 1.208482
- details: Georgia_Kotias.SG Onge.DG 0.000131 0.301663
- details: Geoksyur_EN Onge.DG -0.001262 -3.805506
- details: Anatolia_N Onge.DG 0.001903 5.335295
- dscore: Onge.DG f4: 0.000398 Z: 1.214551
- details: Georgia_Kotias.SG Russia_Shamanka_EN.SG 0.000912 2.224396
- details: Geoksyur_EN Russia_Shamanka_EN.SG -0.000992 -2.990257
- details: Anatolia_N Russia_Shamanka_EN.SG 0.002253 6.554791
- dscore: Russia_Shamanka_EN.SG f4: 0.000905 Z: 2.805857
- details: Georgia_Kotias.SG Ethiopia_4500BP.SG 0.000060 0.127520
- details: Geoksyur_EN Ethiopia_4500BP.SG -0.001782 -5.327943
- details: Anatolia_N Ethiopia_4500BP.SG 0.002251 6.492469
- dscore: Ethiopia_4500BP.SG f4: 0.000361 Z: 1.054142
- gendstat: Sarazm_EN Mbuti.DG 1.118
- gendstat: Sarazm_EN USA_WA_Kennewick.SG 2.319
- gendstat: Sarazm_EN Morocco_Iberomaurusian 1.158
- gendstat: Sarazm_EN Kazakhstan_Botai.SG 1.638
- gendstat: Sarazm_EN Ganj_Dareh_N 1.698
- gendstat: Sarazm_EN PPN 1.499
- gendstat: Sarazm_EN Natufian 0.978
- gendstat: Sarazm_EN Iberia_MN 1.899
- gendstat: Sarazm_EN Russia_MA1.SG 1.630
- gendstat: Sarazm_EN Georgia_Satsurblia.SG 1.360
- gendstat: Sarazm_EN Kostenki14.SG 0.843
- gendstat: Sarazm_EN EEHG -0.105
- gendstat: Sarazm_EN WEHG 0.388
- gendstat: Sarazm_EN WSHG 1.208
- gendstat: Sarazm_EN Onge.DG 1.215
- gendstat: Sarazm_EN Russia_Shamanka_EN.SG 2.806
- gendstat: Sarazm_EN Ethiopia_4500BP.SG 1.054
- gendstat: Mbuti.DG USA_WA_Kennewick.SG 0.775
- gendstat: Mbuti.DG Morocco_Iberomaurusian 0.142
- gendstat: Mbuti.DG Kazakhstan_Botai.SG 0.559
- gendstat: Mbuti.DG Ganj_Dareh_N 0.470
- gendstat: Mbuti.DG PPN 0.475
- gendstat: Mbuti.DG Natufian -0.220
- gendstat: Mbuti.DG Iberia_MN 0.900
- gendstat: Mbuti.DG Russia_MA1.SG 0.510
- gendstat: Mbuti.DG Georgia_Satsurblia.SG 0.381
- gendstat: Mbuti.DG Kostenki14.SG -0.158
- gendstat: Mbuti.DG EEHG -1.237
- gendstat: Mbuti.DG WEHG -0.850
- gendstat: Mbuti.DG WSHG 0.091
- gendstat: Mbuti.DG Onge.DG 0.104
- gendstat: Mbuti.DG Russia_Shamanka_EN.SG 1.996
- gendstat: Mbuti.DG Ethiopia_4500BP.SG -0.029
- gendstat: USA_WA_Kennewick.SG Morocco_Iberomaurusian -0.641
- gendstat: USA_WA_Kennewick.SG Kazakhstan_Botai.SG -0.330
- gendstat: USA_WA_Kennewick.SG Ganj_Dareh_N -0.383
- gendstat: USA_WA_Kennewick.SG PPN -0.372
- gendstat: USA_WA_Kennewick.SG Natufian -0.967
- gendstat: USA_WA_Kennewick.SG Iberia_MN 0.004
- gendstat: USA_WA_Kennewick.SG Russia_MA1.SG -0.211
- gendstat: USA_WA_Kennewick.SG Georgia_Satsurblia.SG -0.307
- gendstat: USA_WA_Kennewick.SG Kostenki14.SG -0.851
- gendstat: USA_WA_Kennewick.SG EEHG -2.093
- gendstat: USA_WA_Kennewick.SG WEHG -1.609
- gendstat: USA_WA_Kennewick.SG WSHG -0.729
- gendstat: USA_WA_Kennewick.SG Onge.DG -0.690
- gendstat: USA_WA_Kennewick.SG Russia_Shamanka_EN.SG 1.048
- gendstat: USA_WA_Kennewick.SG Ethiopia_4500BP.SG -0.754
- gendstat: Morocco_Iberomaurusian Kazakhstan_Botai.SG 0.421
- gendstat: Morocco_Iberomaurusian Ganj_Dareh_N 0.309
- gendstat: Morocco_Iberomaurusian PPN 0.338
- gendstat: Morocco_Iberomaurusian Natufian -0.324
- gendstat: Morocco_Iberomaurusian Iberia_MN 0.733
- gendstat: Morocco_Iberomaurusian Russia_MA1.SG 0.406
- gendstat: Morocco_Iberomaurusian Georgia_Satsurblia.SG 0.265
- gendstat: Morocco_Iberomaurusian Kostenki14.SG -0.264
- gendstat: Morocco_Iberomaurusian EEHG -1.358
- gendstat: Morocco_Iberomaurusian WEHG -0.948
- gendstat: Morocco_Iberomaurusian WSHG -0.026
- gendstat: Morocco_Iberomaurusian Onge.DG -0.022
- gendstat: Morocco_Iberomaurusian Russia_Shamanka_EN.SG 1.734
- gendstat: Morocco_Iberomaurusian Ethiopia_4500BP.SG -0.144
- gendstat: Kazakhstan_Botai.SG Ganj_Dareh_N -0.095
- gendstat: Kazakhstan_Botai.SG PPN -0.085
- gendstat: Kazakhstan_Botai.SG Natufian -0.712
- gendstat: Kazakhstan_Botai.SG Iberia_MN 0.325
- gendstat: Kazakhstan_Botai.SG Russia_MA1.SG 0.070
- gendstat: Kazakhstan_Botai.SG Georgia_Satsurblia.SG -0.065
- gendstat: Kazakhstan_Botai.SG Kostenki14.SG -0.679
- gendstat: Kazakhstan_Botai.SG EEHG -2.162
- gendstat: Kazakhstan_Botai.SG WEHG -1.628
- gendstat: Kazakhstan_Botai.SG WSHG -0.548
- gendstat: Kazakhstan_Botai.SG Onge.DG -0.453
- gendstat: Kazakhstan_Botai.SG Russia_Shamanka_EN.SG 1.632
- gendstat: Kazakhstan_Botai.SG Ethiopia_4500BP.SG -0.504
- gendstat: Ganj_Dareh_N PPN 0.006
- gendstat: Ganj_Dareh_N Natufian -0.633
- gendstat: Ganj_Dareh_N Iberia_MN 0.384
- gendstat: Ganj_Dareh_N Russia_MA1.SG 0.137
- gendstat: Ganj_Dareh_N Georgia_Satsurblia.SG 0.010
- gendstat: Ganj_Dareh_N Kostenki14.SG -0.523
- gendstat: Ganj_Dareh_N EEHG -1.639
- gendstat: Ganj_Dareh_N WEHG -1.284
- gendstat: Ganj_Dareh_N WSHG -0.336
- gendstat: Ganj_Dareh_N Onge.DG -0.330
- gendstat: Ganj_Dareh_N Russia_Shamanka_EN.SG 1.444
- gendstat: Ganj_Dareh_N Ethiopia_4500BP.SG -0.449
- gendstat: PPN Natufian -0.720
- gendstat: PPN Iberia_MN 0.452
- gendstat: PPN Russia_MA1.SG 0.128
- gendstat: PPN Georgia_Satsurblia.SG 0.004
- gendstat: PPN Kostenki14.SG -0.541
- gendstat: PPN EEHG -1.667
- gendstat: PPN WEHG -1.398
- gendstat: PPN WSHG -0.331
- gendstat: PPN Onge.DG -0.337
- gendstat: PPN Russia_Shamanka_EN.SG 1.418
- gendstat: PPN Ethiopia_4500BP.SG -0.439
- gendstat: Natufian Iberia_MN 1.098
- gendstat: Natufian Russia_MA1.SG 0.678
- gendstat: Natufian Georgia_Satsurblia.SG 0.539
- gendstat: Natufian Kostenki14.SG 0.032
- gendstat: Natufian EEHG -1.002
- gendstat: Natufian WEHG -0.596
- gendstat: Natufian WSHG 0.275
- gendstat: Natufian Onge.DG 0.290
- gendstat: Natufian Russia_Shamanka_EN.SG 1.996
- gendstat: Natufian Ethiopia_4500BP.SG 0.178
- gendstat: Iberia_MN Russia_MA1.SG -0.212
- gendstat: Iberia_MN Georgia_Satsurblia.SG -0.321
- gendstat: Iberia_MN Kostenki14.SG -0.928
- gendstat: Iberia_MN EEHG -2.213
- gendstat: Iberia_MN WEHG -2.127
- gendstat: Iberia_MN WSHG -0.723
- gendstat: Iberia_MN Onge.DG -0.760
- gendstat: Iberia_MN Russia_Shamanka_EN.SG 1.041
- gendstat: Iberia_MN Ethiopia_4500BP.SG -0.830
- gendstat: Russia_MA1.SG Georgia_Satsurblia.SG -0.109
- gendstat: Russia_MA1.SG Kostenki14.SG -0.634
- gendstat: Russia_MA1.SG EEHG -1.765
- gendstat: Russia_MA1.SG WEHG -1.317
- gendstat: Russia_MA1.SG WSHG -0.464
- gendstat: Russia_MA1.SG Onge.DG -0.433
- gendstat: Russia_MA1.SG Russia_Shamanka_EN.SG 1.123
- gendstat: Russia_MA1.SG Ethiopia_4500BP.SG -0.515
- gendstat: Georgia_Satsurblia.SG Kostenki14.SG -0.473
- gendstat: Georgia_Satsurblia.SG EEHG -1.402
- gendstat: Georgia_Satsurblia.SG WEHG -1.060
- gendstat: Georgia_Satsurblia.SG WSHG -0.282
- gendstat: Georgia_Satsurblia.SG Onge.DG -0.289
- gendstat: Georgia_Satsurblia.SG Russia_Shamanka_EN.SG 1.113
- gendstat: Georgia_Satsurblia.SG Ethiopia_4500BP.SG -0.377
- gendstat: Kostenki14.SG EEHG -1.011
- gendstat: Kostenki14.SG WEHG -0.610
- gendstat: Kostenki14.SG WSHG 0.239
- gendstat: Kostenki14.SG Onge.DG 0.241
- gendstat: Kostenki14.SG Russia_Shamanka_EN.SG 1.821
- gendstat: Kostenki14.SG Ethiopia_4500BP.SG 0.127
- gendstat: EEHG WEHG 0.672
- gendstat: EEHG WSHG 1.597
- gendstat: EEHG Onge.DG 1.352
- gendstat: EEHG Russia_Shamanka_EN.SG 3.250
- gendstat: EEHG Ethiopia_4500BP.SG 1.088
- gendstat: WEHG WSHG 0.996
- gendstat: WEHG Onge.DG 0.935
- gendstat: WEHG Russia_Shamanka_EN.SG 3.189
- gendstat: WEHG Ethiopia_4500BP.SG 0.727
- gendstat: WSHG Onge.DG 0.004
- gendstat: WSHG Russia_Shamanka_EN.SG 1.841
- gendstat: WSHG Ethiopia_4500BP.SG -0.103
- gendstat: Onge.DG Russia_Shamanka_EN.SG 1.984
- gendstat: Onge.DG Ethiopia_4500BP.SG -0.114
- gendstat: Russia_Shamanka_EN.SG Ethiopia_4500BP.SG -1.767
- ## end of run
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