API tools faq
paste
misnomer001

irula.dg pass

misnomer001
May 31st, 2022
539
0
Never
Add comment
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
text 6.39 KB | None | 0 0
raw download clone embed print report
  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. inbreed: NO
  9. ## qpAdm version: 1520
  10. seed: 1575008812
  11. inbreed set NO
  12. inbreed set NO
  13.  
  14. left pops:
  15. Irula.DG
  16. ONG.SG
  17. Tarim_EMBA1
  18. Iran_GanjDareh_N
  19.  
  20. right pops:
  21. Mbuti.DG
  22. CHG
  23. Mongolia_North_N
  24. Serbia_IronGates_Mesolithic
  25. EHG
  26. WSHG
  27. Russia_Samara_EBA_Yamnaya
  28.  
  29. codimension 1
  30. f4info:
  31. f4rank: 2 dof: 4 chisq: 8.468 tail: 0.075853691 dofdiff: 6 chisqdiff: -8.468 taildiff: 1
  32. B:
  33. scale 1.000 1.000
  34. CHG 0.344 1.581
  35. Mongolia_North_N 0.287 -1.633
  36. Serbia_IronGates_Mesolithic 0.608 0.300
  37. EHG 1.380 -0.166
  38. WSHG 1.671 -0.456
  39. Russia_Samara_EBA_Yamnaya 0.857 0.711
  40. A:
  41. scale 124.774 418.213
  42. ONG.SG -0.255 -0.938
  43. Tarim_EMBA1 1.704 -0.251
  44. Iran_GanjDareh_N 0.172 1.434
  45.  
  46.  
  47. full rank
  48. f4info:
  49. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 4 chisqdiff: 8.468 taildiff: 0.075853691
  50. B:
  51. scale 335.478 72.893 268.959
  52. CHG -1.250 0.301 1.713
  53. Mongolia_North_N 1.136 0.372 -1.321
  54. Serbia_IronGates_Mesolithic -0.749 0.579 0.451
  55. EHG -0.868 1.368 0.327
  56. WSHG -0.731 1.700 0.270
  57. Russia_Samara_EBA_Yamnaya -1.138 0.820 0.969
  58. A:
  59. scale 1.732 1.732 1.732
  60. ONG.SG 1.732 0.000 0.000
  61. Tarim_EMBA1 0.000 1.732 0.000
  62. Iran_GanjDareh_N 0.000 0.000 1.732
  63.  
  64.  
  65. best coefficients: 0.571 0.047 0.382
  66. totmean: 0.571 0.047 0.382
  67. boot mean: 0.571 0.047 0.382
  68. std. errors: 0.018 0.012 0.019
  69.  
  70. error covariance (* 1,000,000)
  71. 315 -35 -280
  72. -35 132 -97
  73. -280 -97 377
  74.  
  75.  
  76. summ: Irula.DG 3 0.075854 0.571 0.047 0.382 315 -35 -280 132 -97 ...
  77. 377
  78.  
  79. fixed pat wt dof chisq tail prob
  80. 000 0 4 8.468 0.0758537 0.571 0.047 0.382
  81. 001 1 5 321.561 0 0.868 0.132 0.000
  82. 010 1 5 24.387 0.000182935 0.583 0.000 0.417
  83. 100 1 5 797.334 0 0.000 0.066 0.934
  84. 011 2 6 422.824 0 1.000 0.000 0.000
  85. 101 2 6 3258.286 0 0.000 1.000 0.000
  86. 110 2 6 815.307 0 0.000 0.000 1.000
  87. best pat: 000 0.0758537 - -
  88. best pat: 010 0.000182935 chi(nested): 15.918 p-value for nested model: 6.61314e-05
  89. best pat: 011 3.45381e-88 chi(nested): 398.437 p-value for nested model: 1.20546e-88
  90.  
  91. coeffs: 0.571 0.047 0.382
  92.  
  93. ## dscore:: f_4(Base, Fit, Rbase, right2)
  94. ## genstat:: f_4(Base, Fit, right1, right2)
  95.  
  96. details: ONG.SG CHG -0.003727 -9.580643
  97. details: Tarim_EMBA1 CHG 0.004129 9.714940
  98. details: Iran_GanjDareh_N CHG 0.006367 16.785682
  99. dscore: CHG f4: 0.000497 Z: 1.544326
  100.  
  101. details: ONG.SG Mongolia_North_N 0.003387 8.847811
  102. details: Tarim_EMBA1 Mongolia_North_N 0.005097 12.369020
  103. details: Iran_GanjDareh_N Mongolia_North_N -0.004910 -13.175084
  104. dscore: Mongolia_North_N f4: 0.000298 Z: 0.931508
  105.  
  106. details: ONG.SG Serbia_IronGates_Mesolithic -0.002234 -6.282553
  107. details: Tarim_EMBA1 Serbia_IronGates_Mesolithic 0.007941 20.671773
  108. details: Iran_GanjDareh_N Serbia_IronGates_Mesolithic 0.001677 5.005350
  109. dscore: Serbia_IronGates_Mesolithic f4: -0.000263 Z: -0.907011
  110.  
  111. details: ONG.SG EHG -0.002587 -6.883778
  112. details: Tarim_EMBA1 EHG 0.018769 41.852242
  113. details: Iran_GanjDareh_N EHG 0.001217 3.242549
  114. dscore: EHG f4: -0.000132 Z: -0.432468
  115.  
  116. details: ONG.SG WSHG -0.002179 -5.324509
  117. details: Tarim_EMBA1 WSHG 0.023328 49.848268
  118. details: Iran_GanjDareh_N WSHG 0.001003 2.427611
  119. dscore: WSHG f4: 0.000233 Z: 0.694496
  120.  
  121. details: ONG.SG Russia_Samara_EBA_Yamnaya -0.003394 -10.133736
  122. details: Tarim_EMBA1 Russia_Samara_EBA_Yamnaya 0.011255 31.006310
  123. details: Iran_GanjDareh_N Russia_Samara_EBA_Yamnaya 0.003604 11.430643
  124. dscore: Russia_Samara_EBA_Yamnaya f4: -0.000034 Z: -0.126757
  125.  
  126. gendstat: Mbuti.DG CHG 1.544
  127. gendstat: Mbuti.DG Mongolia_North_N 0.932
  128. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic -0.907
  129. gendstat: Mbuti.DG EHG -0.432
  130. gendstat: Mbuti.DG WSHG 0.694
  131. gendstat: Mbuti.DG Russia_Samara_EBA_Yamnaya -0.127
  132. gendstat: CHG Mongolia_North_N -0.554
  133. gendstat: CHG Serbia_IronGates_Mesolithic -2.453
  134. gendstat: CHG EHG -1.876
  135. gendstat: CHG WSHG -0.736
  136. gendstat: CHG Russia_Samara_EBA_Yamnaya -1.899
  137. gendstat: Mongolia_North_N Serbia_IronGates_Mesolithic -1.820
  138. gendstat: Mongolia_North_N EHG -1.321
  139. gendstat: Mongolia_North_N WSHG -0.196
  140. gendstat: Mongolia_North_N Russia_Samara_EBA_Yamnaya -1.101
  141. gendstat: Serbia_IronGates_Mesolithic EHG 0.562
  142. gendstat: Serbia_IronGates_Mesolithic WSHG 1.703
  143. gendstat: Serbia_IronGates_Mesolithic Russia_Samara_EBA_Yamnaya 1.148
  144. gendstat: EHG WSHG 1.241
  145. gendstat: EHG Russia_Samara_EBA_Yamnaya 0.417
  146. gendstat: WSHG Russia_Samara_EBA_Yamnaya -0.991
  147.  
  148. ##end of qpAdm: 2.860 seconds cpu 0.582 Mbytes in use
  149.  
Advertisement
Add Comment
Please, Sign In to add comment
Public Pastes
We use cookies for various purposes including analytics. By continuing to use Pastebin, you agree to our use of cookies as described in the Cookies Policy.  OK, I Understand
Not a member of Pastebin yet?
Sign Up, it unlocks many cool features!