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Clojure SocketTimeout

lycheese
Jul 28th, 2022
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  1. 4. Unhandled com.zaxxer.hikari.pool.HikariPool$PoolInitializationException
  2. Failed to initialize pool: Communications link failure
  3.  
  4. The last packet sent successfully to the server was 0 milliseconds ago. The
  5. driver has not received any packets from the server.
  6.  
  7. HikariPool.java: 595 com.zaxxer.hikari.pool.HikariPool/throwPoolInitializationException
  8. HikariPool.java: 581 com.zaxxer.hikari.pool.HikariPool/checkFailFast
  9. HikariPool.java: 115 com.zaxxer.hikari.pool.HikariPool/<init>
  10. HikariDataSource.java: 81 com.zaxxer.hikari.HikariDataSource/<init>
  11. core.clj: 268 hikari-cp.core/make-datasource
  12. core.clj: 265 hikari-cp.core/make-datasource
  13. core.clj: 162 conman.core/connect!
  14. core.clj: 158 conman.core/connect!
  15. REPL: 42 teapot.db.ensembl/eval73413
  16. REPL: 41 teapot.db.ensembl/eval73413
  17. Compiler.java: 7194 clojure.lang.Compiler/eval
  18. Compiler.java: 7149 clojure.lang.Compiler/eval
  19. core.clj: 3215 clojure.core/eval
  20. core.clj: 3211 clojure.core/eval
  21. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn/fn
  22. AFn.java: 152 clojure.lang.AFn/applyToHelper
  23. AFn.java: 144 clojure.lang.AFn/applyTo
  24. core.clj: 667 clojure.core/apply
  25. core.clj: 1990 clojure.core/with-bindings*
  26. core.clj: 1990 clojure.core/with-bindings*
  27. RestFn.java: 425 clojure.lang.RestFn/invoke
  28. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn
  29. main.clj: 437 clojure.main/repl/read-eval-print/fn
  30. main.clj: 437 clojure.main/repl/read-eval-print
  31. main.clj: 458 clojure.main/repl/fn
  32. main.clj: 458 clojure.main/repl
  33. main.clj: 368 clojure.main/repl
  34. RestFn.java: 1523 clojure.lang.RestFn/invoke
  35. interruptible_eval.clj: 84 nrepl.middleware.interruptible-eval/evaluate
  36. interruptible_eval.clj: 56 nrepl.middleware.interruptible-eval/evaluate
  37. interruptible_eval.clj: 152 nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn
  38. AFn.java: 22 clojure.lang.AFn/run
  39. session.clj: 218 nrepl.middleware.session/session-exec/main-loop/fn
  40. session.clj: 217 nrepl.middleware.session/session-exec/main-loop
  41. AFn.java: 22 clojure.lang.AFn/run
  42. Thread.java: 833 java.lang.Thread/run
  43.  
  44. 3. Caused by com.mysql.cj.jdbc.exceptions.CommunicationsException
  45. Communications link failure
  46.  
  47. The last packet sent successfully to the server was 0 milliseconds ago. The
  48. driver has not received any packets from the server.
  49.  
  50. SQLError.java: 174 com.mysql.cj.jdbc.exceptions.SQLError/createCommunicationsException
  51. SQLExceptionsMapping.java: 64 com.mysql.cj.jdbc.exceptions.SQLExceptionsMapping/translateException
  52. ConnectionImpl.java: 828 com.mysql.cj.jdbc.ConnectionImpl/createNewIO
  53. ConnectionImpl.java: 448 com.mysql.cj.jdbc.ConnectionImpl/<init>
  54. ConnectionImpl.java: 241 com.mysql.cj.jdbc.ConnectionImpl/getInstance
  55. NonRegisteringDriver.java: 198 com.mysql.cj.jdbc.NonRegisteringDriver/connect
  56. DriverDataSource.java: 121 com.zaxxer.hikari.util.DriverDataSource/getConnection
  57. PoolBase.java: 358 com.zaxxer.hikari.pool.PoolBase/newConnection
  58. PoolBase.java: 206 com.zaxxer.hikari.pool.PoolBase/newPoolEntry
  59. HikariPool.java: 477 com.zaxxer.hikari.pool.HikariPool/createPoolEntry
  60. HikariPool.java: 560 com.zaxxer.hikari.pool.HikariPool/checkFailFast
  61. HikariPool.java: 115 com.zaxxer.hikari.pool.HikariPool/<init>
  62. HikariDataSource.java: 81 com.zaxxer.hikari.HikariDataSource/<init>
  63. core.clj: 268 hikari-cp.core/make-datasource
  64. core.clj: 265 hikari-cp.core/make-datasource
  65. core.clj: 162 conman.core/connect!
  66. core.clj: 158 conman.core/connect!
  67. REPL: 42 teapot.db.ensembl/eval73413
  68. REPL: 41 teapot.db.ensembl/eval73413
  69. Compiler.java: 7194 clojure.lang.Compiler/eval
  70. Compiler.java: 7149 clojure.lang.Compiler/eval
  71. core.clj: 3215 clojure.core/eval
  72. core.clj: 3211 clojure.core/eval
  73. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn/fn
  74. AFn.java: 152 clojure.lang.AFn/applyToHelper
  75. AFn.java: 144 clojure.lang.AFn/applyTo
  76. core.clj: 667 clojure.core/apply
  77. core.clj: 1990 clojure.core/with-bindings*
  78. core.clj: 1990 clojure.core/with-bindings*
  79. RestFn.java: 425 clojure.lang.RestFn/invoke
  80. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn
  81. main.clj: 437 clojure.main/repl/read-eval-print/fn
  82. main.clj: 437 clojure.main/repl/read-eval-print
  83. main.clj: 458 clojure.main/repl/fn
  84. main.clj: 458 clojure.main/repl
  85. main.clj: 368 clojure.main/repl
  86. RestFn.java: 1523 clojure.lang.RestFn/invoke
  87. interruptible_eval.clj: 84 nrepl.middleware.interruptible-eval/evaluate
  88. interruptible_eval.clj: 56 nrepl.middleware.interruptible-eval/evaluate
  89. interruptible_eval.clj: 152 nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn
  90. AFn.java: 22 clojure.lang.AFn/run
  91. session.clj: 218 nrepl.middleware.session/session-exec/main-loop/fn
  92. session.clj: 217 nrepl.middleware.session/session-exec/main-loop
  93. AFn.java: 22 clojure.lang.AFn/run
  94. Thread.java: 833 java.lang.Thread/run
  95.  
  96. 2. Caused by com.mysql.cj.exceptions.CJCommunicationsException
  97. Communications link failure
  98.  
  99. The last packet sent successfully to the server was 0 milliseconds ago. The
  100. driver has not received any packets from the server.
  101.  
  102. NativeConstructorAccessorImpl.java: -2 jdk.internal.reflect.NativeConstructorAccessorImpl/newInstance0
  103. NativeConstructorAccessorImpl.java: 77 jdk.internal.reflect.NativeConstructorAccessorImpl/newInstance
  104. DelegatingConstructorAccessorImpl.java: 45 jdk.internal.reflect.DelegatingConstructorAccessorImpl/newInstance
  105. Constructor.java: 499 java.lang.reflect.Constructor/newInstanceWithCaller
  106. Constructor.java: 480 java.lang.reflect.Constructor/newInstance
  107. ExceptionFactory.java: 61 com.mysql.cj.exceptions.ExceptionFactory/createException
  108. ExceptionFactory.java: 105 com.mysql.cj.exceptions.ExceptionFactory/createException
  109. ExceptionFactory.java: 151 com.mysql.cj.exceptions.ExceptionFactory/createException
  110. ExceptionFactory.java: 167 com.mysql.cj.exceptions.ExceptionFactory/createCommunicationsException
  111. NativeSocketConnection.java: 89 com.mysql.cj.protocol.a.NativeSocketConnection/connect
  112. NativeSession.java: 120 com.mysql.cj.NativeSession/connect
  113. ConnectionImpl.java: 948 com.mysql.cj.jdbc.ConnectionImpl/connectOneTryOnly
  114. ConnectionImpl.java: 818 com.mysql.cj.jdbc.ConnectionImpl/createNewIO
  115. ConnectionImpl.java: 448 com.mysql.cj.jdbc.ConnectionImpl/<init>
  116. ConnectionImpl.java: 241 com.mysql.cj.jdbc.ConnectionImpl/getInstance
  117. NonRegisteringDriver.java: 198 com.mysql.cj.jdbc.NonRegisteringDriver/connect
  118. DriverDataSource.java: 121 com.zaxxer.hikari.util.DriverDataSource/getConnection
  119. PoolBase.java: 358 com.zaxxer.hikari.pool.PoolBase/newConnection
  120. PoolBase.java: 206 com.zaxxer.hikari.pool.PoolBase/newPoolEntry
  121. HikariPool.java: 477 com.zaxxer.hikari.pool.HikariPool/createPoolEntry
  122. HikariPool.java: 560 com.zaxxer.hikari.pool.HikariPool/checkFailFast
  123. HikariPool.java: 115 com.zaxxer.hikari.pool.HikariPool/<init>
  124. HikariDataSource.java: 81 com.zaxxer.hikari.HikariDataSource/<init>
  125. core.clj: 268 hikari-cp.core/make-datasource
  126. core.clj: 265 hikari-cp.core/make-datasource
  127. core.clj: 162 conman.core/connect!
  128. core.clj: 158 conman.core/connect!
  129. REPL: 42 teapot.db.ensembl/eval73413
  130. REPL: 41 teapot.db.ensembl/eval73413
  131. Compiler.java: 7194 clojure.lang.Compiler/eval
  132. Compiler.java: 7149 clojure.lang.Compiler/eval
  133. core.clj: 3215 clojure.core/eval
  134. core.clj: 3211 clojure.core/eval
  135. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn/fn
  136. AFn.java: 152 clojure.lang.AFn/applyToHelper
  137. AFn.java: 144 clojure.lang.AFn/applyTo
  138. core.clj: 667 clojure.core/apply
  139. core.clj: 1990 clojure.core/with-bindings*
  140. core.clj: 1990 clojure.core/with-bindings*
  141. RestFn.java: 425 clojure.lang.RestFn/invoke
  142. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn
  143. main.clj: 437 clojure.main/repl/read-eval-print/fn
  144. main.clj: 437 clojure.main/repl/read-eval-print
  145. main.clj: 458 clojure.main/repl/fn
  146. main.clj: 458 clojure.main/repl
  147. main.clj: 368 clojure.main/repl
  148. RestFn.java: 1523 clojure.lang.RestFn/invoke
  149. interruptible_eval.clj: 84 nrepl.middleware.interruptible-eval/evaluate
  150. interruptible_eval.clj: 56 nrepl.middleware.interruptible-eval/evaluate
  151. interruptible_eval.clj: 152 nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn
  152. AFn.java: 22 clojure.lang.AFn/run
  153. session.clj: 218 nrepl.middleware.session/session-exec/main-loop/fn
  154. session.clj: 217 nrepl.middleware.session/session-exec/main-loop
  155. AFn.java: 22 clojure.lang.AFn/run
  156. Thread.java: 833 java.lang.Thread/run
  157.  
  158. 1. Caused by java.net.SocketTimeoutException
  159. Connect timed out
  160.  
  161. NioSocketImpl.java: 546 sun.nio.ch.NioSocketImpl/timedFinishConnect
  162. NioSocketImpl.java: 597 sun.nio.ch.NioSocketImpl/connect
  163. SocksSocketImpl.java: 327 java.net.SocksSocketImpl/connect
  164. Socket.java: 633 java.net.Socket/connect
  165. StandardSocketFactory.java: 153 com.mysql.cj.protocol.StandardSocketFactory/connect
  166. NativeSocketConnection.java: 63 com.mysql.cj.protocol.a.NativeSocketConnection/connect
  167. NativeSession.java: 120 com.mysql.cj.NativeSession/connect
  168. ConnectionImpl.java: 948 com.mysql.cj.jdbc.ConnectionImpl/connectOneTryOnly
  169. ConnectionImpl.java: 818 com.mysql.cj.jdbc.ConnectionImpl/createNewIO
  170. ConnectionImpl.java: 448 com.mysql.cj.jdbc.ConnectionImpl/<init>
  171. ConnectionImpl.java: 241 com.mysql.cj.jdbc.ConnectionImpl/getInstance
  172. NonRegisteringDriver.java: 198 com.mysql.cj.jdbc.NonRegisteringDriver/connect
  173. DriverDataSource.java: 121 com.zaxxer.hikari.util.DriverDataSource/getConnection
  174. PoolBase.java: 358 com.zaxxer.hikari.pool.PoolBase/newConnection
  175. PoolBase.java: 206 com.zaxxer.hikari.pool.PoolBase/newPoolEntry
  176. HikariPool.java: 477 com.zaxxer.hikari.pool.HikariPool/createPoolEntry
  177. HikariPool.java: 560 com.zaxxer.hikari.pool.HikariPool/checkFailFast
  178. HikariPool.java: 115 com.zaxxer.hikari.pool.HikariPool/<init>
  179. HikariDataSource.java: 81 com.zaxxer.hikari.HikariDataSource/<init>
  180. core.clj: 268 hikari-cp.core/make-datasource
  181. core.clj: 265 hikari-cp.core/make-datasource
  182. core.clj: 162 conman.core/connect!
  183. core.clj: 158 conman.core/connect!
  184. REPL: 42 teapot.db.ensembl/eval73413
  185. REPL: 41 teapot.db.ensembl/eval73413
  186. Compiler.java: 7194 clojure.lang.Compiler/eval
  187. Compiler.java: 7149 clojure.lang.Compiler/eval
  188. core.clj: 3215 clojure.core/eval
  189. core.clj: 3211 clojure.core/eval
  190. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn/fn
  191. AFn.java: 152 clojure.lang.AFn/applyToHelper
  192. AFn.java: 144 clojure.lang.AFn/applyTo
  193. core.clj: 667 clojure.core/apply
  194. core.clj: 1990 clojure.core/with-bindings*
  195. core.clj: 1990 clojure.core/with-bindings*
  196. RestFn.java: 425 clojure.lang.RestFn/invoke
  197. interruptible_eval.clj: 87 nrepl.middleware.interruptible-eval/evaluate/fn
  198. main.clj: 437 clojure.main/repl/read-eval-print/fn
  199. main.clj: 437 clojure.main/repl/read-eval-print
  200. main.clj: 458 clojure.main/repl/fn
  201. main.clj: 458 clojure.main/repl
  202. main.clj: 368 clojure.main/repl
  203. RestFn.java: 1523 clojure.lang.RestFn/invoke
  204. interruptible_eval.clj: 84 nrepl.middleware.interruptible-eval/evaluate
  205. interruptible_eval.clj: 56 nrepl.middleware.interruptible-eval/evaluate
  206. interruptible_eval.clj: 152 nrepl.middleware.interruptible-eval/interruptible-eval/fn/fn
  207. AFn.java: 22 clojure.lang.AFn/run
  208. session.clj: 218 nrepl.middleware.session/session-exec/main-loop/fn
  209. session.clj: 217 nrepl.middleware.session/session-exec/main-loop
  210. AFn.java: 22 clojure.lang.AFn/run
  211. Thread.java: 833 java.lang.Thread/run
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