Create a directory with blank files and subfolders of the same name.

@echo off
setlocal enabledelayedexpansion

:: Get the full path to the current directory and the batch file itself
set "baseDir=%cd%"
set "outputDir=%baseDir%\Output"
set "thisScript=%~f0"

:: Create Output directory if it doesn't exist
if not exist "%outputDir%" (
    mkdir "%outputDir%"
)

:: Call the recursive function to replicate the structure
call :ReplicateStructure "%baseDir%" "%outputDir%"
goto :eof

:ReplicateStructure
set "sourceDir=%~1"
set "targetDir=%~2"

:: Skip processing if we are in the Output folder or processing the batch file itself
if /i "%sourceDir%"=="%outputDir%" (
    goto :eof
)

:: Skip if the current source directory is the batch file itself
if /i "%sourceDir%\%thisScript%"=="" (
    goto :eof
)

:: Loop through the files in the current directory (excluding system files and folders)
for /f "delims=" %%A in ('dir /b /a-d-h "%sourceDir%"') do (
    set "file=%%A"
    set "fullPath=%sourceDir%\!file!"

    :: Skip the batch file itself
    if /i "!fullPath!"=="%thisScript%" (
        continue
    )

    :: Create an empty file in the corresponding target directory
    type nul > "%targetDir%\!file!"
)

:: Loop through directories and create them in the target directory
for /f "delims=" %%D in ('dir /b /ad-h "%sourceDir%"') do (
    set "folder=%%D"
    set "fullPath=%sourceDir%\!folder!"

    :: Skip the Output directory itself to avoid recursion
    if /i "!fullPath!"=="%outputDir%" (
        continue
    )

    set "newTarget=%targetDir%\!folder!"
    mkdir "!newTarget!" >nul 2>&1
    call :ReplicateStructure "!fullPath!" "!newTarget!"
)

goto :eof