commit f148fa3cac66b17f39472db30cff1584674e877b
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:46:55 2017 +0100

    refactoring, dl4j adaption & bottleneck solved

commit c560ab4c14f5cd0fe821e8e1d9710fbd911f5686
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:44:51 2017 +0100

    small changes

commit ca4c034003d9c3a3d8c7f43ec6c22a9dbc943606
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:43:44 2017 +0100

    tests for hdfs DataSet bin files iterator

commit d0fbe18fdb730af1f16ee4a78068dada1c4c8852
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:42:16 2017 +0100

    main class for testing DataSet bin files iterator

commit 398b92c0e6718419be1d5d70d7cfc6986ea50623
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:41:12 2017 +0100

    iterator over DataSet bin files in hdfs

commit a439d3f7d286defc26941df12d9a8c9dda04e520
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:36:05 2017 +0100

    Hdfs functions: ls files in dfs dir -> iterate over DataSet bin files

commit eea969c91d0f70d0d5ca61ea7a9ac864bb156b3e
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:34:49 2017 +0100

    Properties: removed unused

commit 017ac35bc41922890fa3eb3bb8fb5b86cd542b44
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:33:03 2017 +0100

    merge from n=1 to larger DataSets

commit 21ed01533c08a14d5d83b73d8071dacc5b483997
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:27:34 2017 +0100

    pom: jcommander, dl4j spark functions

commit f2d2ca8b9ab241b4e9c1ae54263d3dae2cb9b40f
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Mon Dec 11 10:26:40 2017 +0100

    shared constants class

commit 4c9ada78c779ad270dcaa5248624cf4b563dd69d
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:32:15 2017 +0100

    fixes

commit d20ad87a5de0fd9bf2983e533b63db250ce1685d
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:31:34 2017 +0100

    disable logging in tests

commit 9990e4b4b2c1eedb0fc276f19646209c914bea9b
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:30:57 2017 +0100

    test for spark serialisation of metaData

commit 0343ea73c9d41d1177fd4d51a9e39e10b519eb66
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:27:32 2017 +0100

    fix: lombock removed from metaData

commit dc17ec208504de339b25a7cd0beee3d673a3a238
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:25:14 2017 +0100

    fixed: normalizer: use native double sqrt if possible

commit 470d7de799531cb7e79f034dc9de4e067671ffc9
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:23:22 2017 +0100

    new Main fixed for JCommander

commit 47e03f6887ec2295da867f6019540a5c04d65f5b
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Sat Dec 9 03:21:47 2017 +0100

    fix: sublist not serialisable

commit c0e5f889608d013ff6c2e6db41bf521dba141511
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:15:24 2017 +0100

    new repository creator for native dl4j hdfs iterator (solves bottleneck problem ?)

commit 0f7ae8a887211b3eb27216d396c9cda9b9ede02b
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:12:43 2017 +0100

    update of the old SparkDataRepositoryAbundanceCreator classes for backward compatibility

commit 8064d0a952780b867bd83df671e4af86e0292b42
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:11:35 2017 +0100

    FastaReaderBioJavaAbundanceTest adapted for DataSetMetaData

commit 42773c18baa8239e515fc24b7e292952434be273
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:10:47 2017 +0100

    Integration of DataSetMetaData in FastaReaderBioJavaAbundance

commit bbcca9f27d61ff5699def8f850a8ac8099f79cb1
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:09:59 2017 +0100

    MetaData: lombock and further parameter

commit 8e7743d8169a098542e22cd2226caab738be54b2
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 01:12:04 2017 +0100

    DataSetMetaData class

commit 4846301f4d84c8df5b79703daba7d6a16fecda94
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 01:09:52 2017 +0100

    new DataSetMetaData Class added to feature iterator & tests

commit f90d8947ad60e96953e9cd88454bd7cb62cd5a47
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
    FastaReaderBioJavaAbundanceTest adapted for DataSetMetaData

commit 42773c18baa8239e515fc24b7e292952434be273
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:10:47 2017 +0100

    Integration of DataSetMetaData in FastaReaderBioJavaAbundance

commit bbcca9f27d61ff5699def8f850a8ac8099f79cb1
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 15:09:59 2017 +0100

    MetaData: lombock and further parameter

commit 8e7743d8169a098542e22cd2226caab738be54b2
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 01:12:04 2017 +0100

    DataSetMetaData class

commit 4846301f4d84c8df5b79703daba7d6a16fecda94
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 01:09:52 2017 +0100

    new DataSetMetaData Class added to feature iterator & tests

commit f90d8947ad60e96953e9cd88454bd7cb62cd5a47
Author: amoellma <ansgar@cebitec.uni-bielefeld.de>
Date:   Thu Dec 7 00:03:10 2017 +0100

    Verify that a metadata object sticks always to a feature.