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- left pops:
- Russia_Steppe_Eneolithic
- CHG
- EHG
- right pops:
- Mbuti.DG
- Barcin_N
- Belgium_UP_GoyetQ116_1_published_all
- Czech_Vestonice
- Ethiopia_4500BP_published.SG
- Han.DG
- Iran_GanjDareh_N
- Israel_Natufian
- Italy_Villabruna
- Onge.DG
- Papuan.DG
- Russia_Kostenki14
- Russia_Ust_Ishim_HG_published.DG
- Ukraine_Mesolithic
- 0 Russia_Steppe_Eneolithic 3
- 1 CHG 2
- 2 EHG 3
- 3 Mbuti.DG 4
- 4 Barcin_N 16
- 5 Belgium_UP_GoyetQ116_1_published_all 1
- 6 Czech_Vestonice 4
- 7 Ethiopia_4500BP_published.SG 1
- 8 Han.DG 3
- 9 Iran_GanjDareh_N 8
- 10 Israel_Natufian 7
- 11 Italy_Villabruna 1
- 12 Onge.DG 2
- 13 Papuan.DG 14
- 14 Russia_Kostenki14 1
- 15 Russia_Ust_Ishim_HG_published.DG 1
- 16 Ukraine_Mesolithic 4
- jackknife block size: 0.050
- snps: 1149522 indivs: 75
- number of blocks for block jackknife: 714
- ## ncols: 1149522
- coverage: Russia_Steppe_Eneolithic 986433
- coverage: CHG 1123320
- coverage: EHG 1004680
- coverage: Mbuti.DG 1096005
- coverage: Barcin_N 1105818
- coverage: Belgium_UP_GoyetQ116_1_published_all 749311
- coverage: Czech_Vestonice 747710
- coverage: Ethiopia_4500BP_published.SG 1123359
- coverage: Han.DG 1095983
- coverage: Iran_GanjDareh_N 1034117
- coverage: Israel_Natufian 523633
- coverage: Italy_Villabruna 865643
- coverage: Onge.DG 1106455
- coverage: Papuan.DG 1096022
- coverage: Russia_Kostenki14 1044772
- coverage: Russia_Ust_Ishim_HG_published.DG 1121639
- coverage: Ukraine_Mesolithic 924635
- Effective number of blocks: 624.680
- numsnps used: 304371
- codimension 1
- f4info:
- f4rank: 1 dof: 12 chisq: 11.852 tail: 0.457605307 dofdiff: 14 chisqdiff: -11.852 taildiff: 1
- B:
- scale 1.000
- Barcin_N 0.098
- Belgium_UP_GoyetQ116_1_published_all 1.003
- Czech_Vestonice 1.034
- Ethiopia_4500BP_published.SG -0.091
- Han.DG 0.548
- Iran_GanjDareh_N -0.616
- Israel_Natufian 0.041
- Italy_Villabruna 1.711
- Onge.DG 0.439
- Papuan.DG 0.405
- Russia_Kostenki14 0.682
- Russia_Ust_Ishim_HG_published.DG 0.250
- Ukraine_Mesolithic 2.532
- A:
- scale 338.197
- CHG -0.827
- EHG 1.147
- full rank
- f4info:
- f4rank: 2 dof: 0 chisq: 0.000 tail: 1 dofdiff: 12 chisqdiff: 11.852 taildiff: 0.457605307
- B:
- scale 349.029 314.781
- Barcin_N -0.250 0.005
- Belgium_UP_GoyetQ116_1_published_all -1.073 0.924
- Czech_Vestonice -1.060 1.004
- Ethiopia_4500BP_published.SG 0.064 -0.124
- Han.DG -0.578 0.545
- Iran_GanjDareh_N 0.320 -0.795
- Israel_Natufian -0.363 -0.187
- Italy_Villabruna -1.759 1.656
- Onge.DG -0.547 0.373
- Papuan.DG -0.485 0.322
- Russia_Kostenki14 -0.926 0.455
- Russia_Ust_Ishim_HG_published.DG -0.481 0.070
- Ukraine_Mesolithic -2.317 2.638
- A:
- scale 1.414 1.414
- CHG 1.414 0.000
- EHG 0.000 1.414
- best coefficients: 0.581 0.419
- Jackknife mean: 0.581205234 0.418794766
- std. errors: 0.018 0.018
- error covariance (* 1,000,000)
- 312 -312
- -312 312
- summ: Russia_Steppe_Eneolithic 2 0.457605 0.581 0.419 312 -312 312
- fixed pat wt dof chisq tail prob
- 00 0 12 11.852 0.457605 0.581 0.419
- 01 1 13 387.797 0 1.000 0.000
- 10 1 13 728.361 0 0.000 1.000
- best pat: 00 0.457605 - -
- best pat: 01 8.42981e-75 chi(nested): 375.945 p-value for nested model: 9.50373e-84
- coeffs: 0.581 0.419
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: CHG Barcin_N -0.000717 -2.020554
- details: EHG Barcin_N 0.000017 0.050699
- dscore: Barcin_N f4: -0.000410 Z: -1.459127
- details: CHG Belgium_UP_GoyetQ116_1_published_all -0.003075 -5.494386
- details: EHG Belgium_UP_GoyetQ116_1_published_all 0.002937 5.541054
- dscore: Belgium_UP_GoyetQ116_1_published_all f4: -0.000558 Z: -1.249010
- details: CHG Czech_Vestonice -0.003036 -6.164243
- details: EHG Czech_Vestonice 0.003190 6.551557
- dscore: Czech_Vestonice f4: -0.000429 Z: -1.079288
- details: CHG Ethiopia_4500BP_published.SG 0.000184 0.481024
- details: EHG Ethiopia_4500BP_published.SG -0.000392 -1.065380
- dscore: Ethiopia_4500BP_published.SG f4: -0.000058 Z: -0.186251
- details: CHG Han.DG -0.001657 -3.972407
- details: EHG Han.DG 0.001733 4.466908
- dscore: Han.DG f4: -0.000237 Z: -0.712767
- details: CHG Iran_GanjDareh_N 0.000916 2.299954
- details: EHG Iran_GanjDareh_N -0.002525 -6.693787
- dscore: Iran_GanjDareh_N f4: -0.000525 Z: -1.647726
- details: CHG Israel_Natufian -0.001041 -2.274594
- details: EHG Israel_Natufian -0.000593 -1.301036
- dscore: Israel_Natufian f4: -0.000853 Z: -2.314429
- details: CHG Italy_Villabruna -0.005040 -9.153855
- details: EHG Italy_Villabruna 0.005261 9.267209
- dscore: Italy_Villabruna f4: -0.000727 Z: -1.609846
- details: CHG Onge.DG -0.001568 -3.546466
- details: EHG Onge.DG 0.001184 2.851456
- dscore: Onge.DG f4: -0.000415 Z: -1.184254
- details: CHG Papuan.DG -0.001391 -3.463963
- details: EHG Papuan.DG 0.001024 2.696729
- dscore: Papuan.DG f4: -0.000380 Z: -1.203419
- details: CHG Russia_Kostenki14 -0.002654 -5.241275
- details: EHG Russia_Kostenki14 0.001445 2.749105
- dscore: Russia_Kostenki14 f4: -0.000938 Z: -2.279795
- details: CHG Russia_Ust_Ishim_HG_published.DG -0.001378 -2.958279
- details: EHG Russia_Ust_Ishim_HG_published.DG 0.000222 0.484930
- dscore: Russia_Ust_Ishim_HG_published.DG f4: -0.000708 Z: -1.878170
- details: CHG Ukraine_Mesolithic -0.006640 -14.729258
- details: EHG Ukraine_Mesolithic 0.008381 19.319601
- dscore: Ukraine_Mesolithic f4: -0.000350 Z: -0.971900
- gendstat: Mbuti.DG Barcin_N -1.459
- gendstat: Mbuti.DG Belgium_UP_GoyetQ116_1_published_all -1.249
- gendstat: Mbuti.DG Czech_Vestonice -1.079
- gendstat: Mbuti.DG Ethiopia_4500BP_published.SG -0.186
- gendstat: Mbuti.DG Han.DG -0.713
- gendstat: Mbuti.DG Iran_GanjDareh_N -1.648
- gendstat: Mbuti.DG Israel_Natufian -2.314
- gendstat: Mbuti.DG Italy_Villabruna -1.610
- gendstat: Mbuti.DG Onge.DG -1.184
- gendstat: Mbuti.DG Papuan.DG -1.203
- gendstat: Mbuti.DG Russia_Kostenki14 -2.280
- gendstat: Mbuti.DG Russia_Ust_Ishim_HG_published.DG -1.878
- gendstat: Mbuti.DG Ukraine_Mesolithic -0.972
- gendstat: Barcin_N Belgium_UP_GoyetQ116_1_published_all -0.369
- gendstat: Barcin_N Czech_Vestonice -0.056
- gendstat: Barcin_N Ethiopia_4500BP_published.SG 0.987
- gendstat: Barcin_N Han.DG 0.613
- gendstat: Barcin_N Iran_GanjDareh_N -0.435
- gendstat: Barcin_N Israel_Natufian -1.451
- gendstat: Barcin_N Italy_Villabruna -0.810
- gendstat: Barcin_N Onge.DG -0.018
- gendstat: Barcin_N Papuan.DG 0.102
- gendstat: Barcin_N Russia_Kostenki14 -1.407
- gendstat: Barcin_N Russia_Ust_Ishim_HG_published.DG -0.823
- gendstat: Barcin_N Ukraine_Mesolithic 0.209
- gendstat: Belgium_UP_GoyetQ116_1_published_all Czech_Vestonice 0.283
- gendstat: Belgium_UP_GoyetQ116_1_published_all Ethiopia_4500BP_published.SG 1.014
- gendstat: Belgium_UP_GoyetQ116_1_published_all Han.DG 0.739
- gendstat: Belgium_UP_GoyetQ116_1_published_all Iran_GanjDareh_N 0.073
- gendstat: Belgium_UP_GoyetQ116_1_published_all Israel_Natufian -0.615
- gendstat: Belgium_UP_GoyetQ116_1_published_all Italy_Villabruna -0.342
- gendstat: Belgium_UP_GoyetQ116_1_published_all Onge.DG 0.318
- gendstat: Belgium_UP_GoyetQ116_1_published_all Papuan.DG 0.397
- gendstat: Belgium_UP_GoyetQ116_1_published_all Russia_Kostenki14 -0.785
- gendstat: Belgium_UP_GoyetQ116_1_published_all Russia_Ust_Ishim_HG_published.DG -0.296
- gendstat: Belgium_UP_GoyetQ116_1_published_all Ukraine_Mesolithic 0.476
- gendstat: Czech_Vestonice Ethiopia_4500BP_published.SG 0.843
- gendstat: Czech_Vestonice Han.DG 0.498
- gendstat: Czech_Vestonice Iran_GanjDareh_N -0.232
- gendstat: Czech_Vestonice Israel_Natufian -0.988
- gendstat: Czech_Vestonice Italy_Villabruna -0.636
- gendstat: Czech_Vestonice Onge.DG 0.032
- gendstat: Czech_Vestonice Papuan.DG 0.126
- gendstat: Czech_Vestonice Russia_Kostenki14 -1.179
- gendstat: Czech_Vestonice Russia_Ust_Ishim_HG_published.DG -0.638
- gendstat: Czech_Vestonice Ukraine_Mesolithic 0.203
- gendstat: Ethiopia_4500BP_published.SG Han.DG -0.461
- gendstat: Ethiopia_4500BP_published.SG Iran_GanjDareh_N -1.212
- gendstat: Ethiopia_4500BP_published.SG Israel_Natufian -1.825
- gendstat: Ethiopia_4500BP_published.SG Italy_Villabruna -1.336
- gendstat: Ethiopia_4500BP_published.SG Onge.DG -0.875
- gendstat: Ethiopia_4500BP_published.SG Papuan.DG -0.855
- gendstat: Ethiopia_4500BP_published.SG Russia_Kostenki14 -1.851
- gendstat: Ethiopia_4500BP_published.SG Russia_Ust_Ishim_HG_published.DG -1.451
- gendstat: Ethiopia_4500BP_published.SG Ukraine_Mesolithic -0.718
- gendstat: Han.DG Iran_GanjDareh_N -0.898
- gendstat: Han.DG Israel_Natufian -1.590
- gendstat: Han.DG Italy_Villabruna -1.080
- gendstat: Han.DG Onge.DG -0.586
- gendstat: Han.DG Papuan.DG -0.488
- gendstat: Han.DG Russia_Kostenki14 -1.716
- gendstat: Han.DG Russia_Ust_Ishim_HG_published.DG -1.279
- gendstat: Han.DG Ukraine_Mesolithic -0.323
- gendstat: Iran_GanjDareh_N Israel_Natufian -0.883
- gendstat: Iran_GanjDareh_N Italy_Villabruna -0.450
- gendstat: Iran_GanjDareh_N Onge.DG 0.317
- gendstat: Iran_GanjDareh_N Papuan.DG 0.441
- gendstat: Iran_GanjDareh_N Russia_Kostenki14 -1.031
- gendstat: Iran_GanjDareh_N Russia_Ust_Ishim_HG_published.DG -0.458
- gendstat: Iran_GanjDareh_N Ukraine_Mesolithic 0.490
- gendstat: Israel_Natufian Italy_Villabruna 0.265
- gendstat: Israel_Natufian Onge.DG 1.076
- gendstat: Israel_Natufian Papuan.DG 1.203
- gendstat: Israel_Natufian Russia_Kostenki14 -0.183
- gendstat: Israel_Natufian Russia_Ust_Ishim_HG_published.DG 0.326
- gendstat: Israel_Natufian Ukraine_Mesolithic 1.225
- gendstat: Italy_Villabruna Onge.DG 0.662
- gendstat: Italy_Villabruna Papuan.DG 0.759
- gendstat: Italy_Villabruna Russia_Kostenki14 -0.423
- gendstat: Italy_Villabruna Russia_Ust_Ishim_HG_published.DG 0.038
- gendstat: Italy_Villabruna Ukraine_Mesolithic 0.954
- gendstat: Onge.DG Papuan.DG 0.108
- gendstat: Onge.DG Russia_Kostenki14 -1.267
- gendstat: Onge.DG Russia_Ust_Ishim_HG_published.DG -0.735
- gendstat: Onge.DG Ukraine_Mesolithic 0.174
- gendstat: Papuan.DG Russia_Kostenki14 -1.388
- gendstat: Papuan.DG Russia_Ust_Ishim_HG_published.DG -0.873
- gendstat: Papuan.DG Ukraine_Mesolithic 0.085
- gendstat: Russia_Kostenki14 Russia_Ust_Ishim_HG_published.DG 0.488
- gendstat: Russia_Kostenki14 Ukraine_Mesolithic 1.366
- gendstat: Russia_Ust_Ishim_HG_published.DG Ukraine_Mesolithic 0.860
- ##end of qpAdm: 316.533 seconds cpu 1385.611 Mbytes in use
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