Advertisement
gisejo

Untitled

Oct 29th, 2019
111
0
Never
Not a member of Pastebin yet? Sign Up, it unlocks many cool features!
text 8.26 KB | None | 0 0
  1. /*
  2. * Copyright (c) 2016, NVIDIA CORPORATION. All rights reserved.
  3. *
  4. * Please refer to the NVIDIA end user license agreement (EULA) associated
  5. * with this source code for terms and conditions that govern your use of
  6. * this software. Any use, reproduction, disclosure, or distribution of
  7. * this software and related documentation outside the terms of the EULA
  8. * is strictly prohibited.
  9. *
  10. */
  11.  
  12. #include <stdio.h>
  13. #include <stdlib.h>
  14. #include <cuda_runtime.h>
  15. #include "helper_cuda.h"
  16. #include "nvgraph.h"
  17.  
  18. #include<iostream>
  19. #include<string>
  20. #include<iomanip>
  21. #include<fstream>
  22. #include<cstdlib>
  23. #include<bits/stdc++.h>
  24.  
  25. using namespace std;
  26.  
  27.  
  28. /* Single Source Shortest Path (SSSP)
  29. * Calculate the shortest path distance from a single vertex in the graph
  30. * to all other vertices.
  31. */
  32.  
  33. struct tmp_edge{
  34. int src_id;
  35. int dst_id;
  36. float weight;
  37. };
  38.  
  39. int compare_edges(const void * a, const void * b)
  40. {
  41. return ( (*(struct tmp_edge *)a).dst_id - (*(struct tmp_edge *)b).dst_id );
  42. }
  43.  
  44. void check_status(nvgraphStatus_t status)
  45. {
  46. if ((int)status != 0)
  47. {
  48. printf("ERROR : %d\n",status);
  49. exit(0);
  50. }
  51. }
  52.  
  53. int main(int argc, char **argv)
  54. {
  55.  
  56. const char * file_name = "./graph.bin";
  57.  
  58. // open file
  59. fstream file(file_name, ios::in | ios::binary);
  60.  
  61. int vertices_count = 0;
  62. long long edges_count = 0;
  63.  
  64. // read header
  65. file.read((char*)(&vertices_count), sizeof(int));
  66. file.read((char*)(&edges_count), sizeof(long long));
  67.  
  68. // print graph
  69. cout << "Graph has " << vertices_count << " vertices" << endl;
  70. cout << "Graph has " << edges_count << " edges" << endl;
  71.  
  72. int n = vertices_count;
  73. int nnz = edges_count;//because nvgraphCSCTopology32I_st structure can take only int as 3 parameter, and there is no analog for 64-bit
  74.  
  75.  
  76. cout << "Graph has " << n << " vertices" << endl;
  77. cout << "Graph has " << nnz << " edges" << endl;
  78.  
  79. const size_t vertex_numsets = 2, edge_numsets = 1;
  80. int *destination_offsets_h;
  81. int *source_indices_h;
  82. float *weights_h, *sssp_1_h, *sssp_2_h;
  83. void** vertex_dim;
  84.  
  85. // nvgraph variables
  86. nvgraphStatus_t status;
  87. nvgraphHandle_t handle;
  88. nvgraphGraphDescr_t graph;
  89. nvgraphCSCTopology32I_t CSC_input;
  90. cudaDataType_t edge_dimT = CUDA_R_32F;
  91. cudaDataType_t* vertex_dimT;
  92.  
  93. // use command-line specified CUDA device, otherwise use device with highest Gflops/s
  94. int cuda_device = 0;
  95. cuda_device = findCudaDevice(argc, (const char **)argv);
  96.  
  97. cudaDeviceProp deviceProp;
  98. checkCudaErrors(cudaGetDevice(&cuda_device));
  99.  
  100. checkCudaErrors(cudaGetDeviceProperties(&deviceProp, cuda_device));
  101.  
  102. printf("> Detected Compute SM %d.%d hardware with %d multi-processors\n",
  103. deviceProp.major, deviceProp.minor, deviceProp.multiProcessorCount);
  104.  
  105. if (deviceProp.major < 3)
  106. {
  107. printf("> nvGraph requires device SM 3.0+\n");
  108. printf("> Waiving.\n");
  109. exit(EXIT_WAIVED);
  110. }
  111.  
  112. // Init host data
  113. destination_offsets_h = (int*) malloc((n+1)*sizeof(int));
  114. source_indices_h = (int*) malloc(nnz*sizeof(int));
  115. weights_h = (float*)malloc(nnz*sizeof(float));
  116. sssp_1_h = (float*)malloc(n*sizeof(float));
  117. sssp_2_h = (float*)malloc(n*sizeof(float));
  118. vertex_dim = (void**)malloc(vertex_numsets*sizeof(void*));
  119. vertex_dimT = (cudaDataType_t*)malloc(vertex_numsets*sizeof(cudaDataType_t));
  120. CSC_input = (nvgraphCSCTopology32I_t) malloc(sizeof(struct nvgraphCSCTopology32I_st));
  121.  
  122. vertex_dim[0]= (void*)sssp_1_h; vertex_dim[1]= (void*)sssp_2_h;
  123. vertex_dimT[0] = CUDA_R_32F; vertex_dimT[1]= CUDA_R_32F;
  124.  
  125. for (int i = 0; i < n; i++){
  126. destination_offsets_h [i] = INT_MAX;
  127. }
  128.  
  129.  
  130.  
  131. struct tmp_edge * Edges = (tmp_edge*)malloc(nnz*sizeof(tmp_edge));
  132.  
  133. // get & print graph data for WEIGHTED graph
  134. for(int i = 0; i < nnz; i++){
  135. int src_id = 0, dst_id = 0;
  136. float weight = 0;
  137.  
  138. // read i-th edge data
  139. file.read((char*)(&src_id), sizeof(int));
  140. file.read((char*)(&dst_id), sizeof(int));
  141. file.read((char*)(&weight), sizeof(float)); // remove it for unweighed graph
  142.  
  143. //print edge data
  144. //cout << i << " " << src_id << " " << dst_id << " | " << weight << endl;
  145.  
  146. Edges[i] = {src_id, dst_id, weight};
  147.  
  148. //cout << i << " " << Edges[i].src_id << " " << Edges[i].dst_id << " " << Edges[i].weight << endl;
  149. }
  150.  
  151. qsort(Edges, nnz, sizeof(tmp_edge), compare_edges);
  152.  
  153. int prev_dst_id = -1;
  154.  
  155. for(int i = 0; i < nnz; i++){
  156. weights_h [i] = Edges[i].weight;
  157.  
  158. int tmp_dst_id = Edges[i].dst_id;
  159.  
  160. if (tmp_dst_id > prev_dst_id){
  161.  
  162.  
  163. for (int j = prev_dst_id + 1; j <= tmp_dst_id; j++){
  164.  
  165. destination_offsets_h [j] = i;
  166.  
  167. }
  168.  
  169. prev_dst_id = tmp_dst_id;
  170.  
  171. }
  172.  
  173. source_indices_h [i] = Edges[i].src_id;
  174. //cout << i << " " << Edges[i].src_id << " " << Edges[i].dst_id << " " << Edges[i].weight << endl;
  175. }
  176.  
  177. for (int j = prev_dst_id + 1; j <= n; j++){
  178.  
  179. destination_offsets_h [j] = nnz;
  180.  
  181. }
  182.  
  183. for (int i = 0; i < n; i++){
  184. if (destination_offsets_h [i] == INT_MAX){
  185. cout << "MAX reached";
  186. fflush (stdout);
  187. }
  188. }
  189.  
  190. cout << ".";
  191. fflush (stdout);
  192.  
  193.  
  194. /*
  195.  
  196. weights_h [0] = 0.333333;
  197. weights_h [1] = 0.500000;
  198. weights_h [2] = 0.333333;
  199. weights_h [3] = 0.500000;
  200. weights_h [4] = 0.500000;
  201. weights_h [5] = 1.000000;
  202. weights_h [6] = 0.333333;
  203. weights_h [7] = 0.500000;
  204. weights_h [8] = 0.500000;
  205. weights_h [9] = 0.500000;
  206.  
  207. destination_offsets_h [0] = 0;
  208. destination_offsets_h [1] = 1;
  209. destination_offsets_h [2] = 3;
  210. destination_offsets_h [3] = 4;
  211. destination_offsets_h [4] = 6;
  212. destination_offsets_h [5] = 8;
  213. destination_offsets_h [6] = 10;
  214.  
  215. source_indices_h [0] = 2;
  216. source_indices_h [1] = 0;
  217. source_indices_h [2] = 2;
  218. source_indices_h [3] = 0;
  219. source_indices_h [4] = 4;
  220. source_indices_h [5] = 5;
  221. source_indices_h [6] = 2;
  222. source_indices_h [7] = 3;
  223. source_indices_h [8] = 3;
  224. source_indices_h [9] = 4;
  225.  
  226. */
  227.  
  228. check_status(nvgraphCreate(&handle));
  229. check_status(nvgraphCreateGraphDescr (handle, &graph));
  230.  
  231. CSC_input->nvertices = n;
  232. CSC_input->nedges = nnz;
  233. CSC_input->destination_offsets = destination_offsets_h;
  234. CSC_input->source_indices = source_indices_h;
  235.  
  236. // Set graph connectivity and properties (tranfers)
  237. check_status(nvgraphSetGraphStructure(handle, graph, (void*)CSC_input, NVGRAPH_CSC_32));
  238. check_status(nvgraphAllocateVertexData(handle, graph, vertex_numsets, vertex_dimT));
  239. check_status(nvgraphAllocateEdgeData (handle, graph, edge_numsets, &edge_dimT));
  240. check_status(nvgraphSetEdgeData(handle, graph, (void*)weights_h, 0));
  241.  
  242. // Solve
  243. int source_vert = 0;
  244. check_status(nvgraphSssp(handle, graph, 0, &source_vert, 0));
  245.  
  246. cout << "1";
  247. fflush(stdout);
  248.  
  249. // Solve with another source
  250. source_vert = 5;
  251. check_status(nvgraphSssp(handle, graph, 0, &source_vert, 1));
  252.  
  253. // Get and print result
  254. cout << "2";
  255. fflush(stdout);
  256.  
  257.  
  258. check_status(nvgraphGetVertexData(handle, graph, (void*)sssp_1_h, 0));
  259.  
  260. cout << "3";
  261. fflush(stdout);
  262.  
  263. // expect sssp_1_h = (0.000000 0.500000 0.500000 1.333333 0.833333 1.333333)^T
  264. printf("sssp_1_h\n");
  265. for (int i = 0; i<n; i++) printf("%f\n",sssp_1_h[i]); printf("\n");
  266. printf("\nDone!\n");
  267.  
  268.  
  269. check_status(nvgraphGetVertexData(handle, graph, (void*)sssp_2_h, 1));
  270. // expect sssp_2_h = (FLT_MAX FLT_MAX FLT_MAX 1.000000 1.500000 0.000000 )^T
  271. printf("sssp_2_h\n");
  272. for (int i = 0; i<n; i++) printf("%f\n",sssp_2_h[i]); printf("\n");
  273. printf("\nDone!\n");
  274.  
  275. free(destination_offsets_h);
  276. free(source_indices_h);
  277. free(weights_h);
  278. free(sssp_1_h);
  279. free(sssp_2_h);
  280. free(vertex_dim);
  281. free(vertex_dimT);
  282. free(CSC_input);
  283.  
  284. //Clean
  285. check_status(nvgraphDestroyGraphDescr (handle, graph));
  286. check_status(nvgraphDestroy (handle));
  287.  
  288. file.close();
  289.  
  290. return EXIT_SUCCESS;
  291. }
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement