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misnomer001

steppe_en with wshg

misnomer001
May 6th, 2021
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  1. qpAdm: parameter file: par
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. details: YES
  5. ## qpAdm version: 1201
  6. seed: 1629246061
  7.  
  8. left pops:
  9. Steppe_Eneolithic
  10. EHG
  11. Georgia_Kotias.SG
  12. Russia_HG_Tyumen
  13.  
  14. right pops:
  15. Mbuti.DG
  16. Brazil_LapaDoSanto_9600BP
  17. China_Tianyuan
  18. Russia_Ust_Ishim.DG
  19. Russia_Kostenki14
  20. Russia_MA1_HG.SG
  21. Morocco_Iberomaurusian
  22. Italy_North_Villabruna_HG
  23. Czech_Vestonice16
  24. Spain_ElMiron
  25. Turkey_N
  26. Iran_GanjDareh_N
  27. Irula.DG
  28.  
  29. codimension 1
  30. f4info:
  31. f4rank: 2 dof: 10 chisq: 25.767 tail: 0.00406669766 dofdiff: 12 chisqdiff: -25.767 taildiff: 1
  32. B:
  33. scale 1.000 1.000
  34. Brazil_LapaDoSanto_9600BP 1.839 -1.123
  35. China_Tianyuan 0.702 -0.145
  36. Russia_Ust_Ishim.DG 0.361 -0.390
  37. Russia_Kostenki14 0.615 0.389
  38. Russia_MA1_HG.SG 2.201 -1.045
  39. Morocco_Iberomaurusian 0.075 0.206
  40. Italy_North_Villabruna_HG 0.953 2.425
  41. Czech_Vestonice16 0.686 1.088
  42. Spain_ElMiron 0.882 1.068
  43. Turkey_N -0.337 0.778
  44. Iran_GanjDareh_N -0.667 -0.522
  45. Irula.DG 0.227 -0.443
  46. A:
  47. scale 305.535 873.332
  48. EHG 0.971 0.978
  49. Georgia_Kotias.SG -0.827 -0.470
  50. Russia_HG_Tyumen 1.172 -1.350
  51.  
  52.  
  53. full rank
  54. f4info:
  55. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 10 chisqdiff: 25.767 taildiff: 0.00406669766
  56. B:
  57. scale 327.049 275.924 251.905
  58. Brazil_LapaDoSanto_9600BP 1.355 -1.544 2.075
  59. China_Tianyuan 0.567 -0.780 0.674
  60. Russia_Ust_Ishim.DG 0.119 -0.417 0.450
  61. Russia_Kostenki14 0.635 -0.832 0.353
  62. Russia_MA1_HG.SG 1.687 -1.931 2.392
  63. Morocco_Iberomaurusian 0.157 -0.171 -0.018
  64. Italy_North_Villabruna_HG 1.731 -1.413 -0.114
  65. Czech_Vestonice16 0.988 -0.975 0.149
  66. Spain_ElMiron 1.150 -1.145 0.316
  67. Turkey_N -0.221 -0.213 -0.751
  68. Iran_GanjDareh_N -1.100 0.153 -0.615
  69. Irula.DG 0.030 -0.244 0.337
  70. A:
  71. scale 1.732 1.732 1.732
  72. EHG 1.732 0.000 0.000
  73. Georgia_Kotias.SG 0.000 1.732 0.000
  74. Russia_HG_Tyumen 0.000 0.000 1.732
  75.  
  76.  
  77. best coefficients: 0.372 0.549 0.079
  78. totmean: 0.372 0.549 0.079
  79. boot mean: 0.373 0.549 0.079
  80. std. errors: 0.049 0.020 0.040
  81.  
  82. error covariance (* 1,000,000)
  83. 2362 -565 -1797
  84. -565 404 161
  85. -1797 161 1636
  86.  
  87.  
  88. summ: Steppe_Eneolithic 3 0.004067 0.373 0.549 0.079 2362 -565 -1797 404 161 ...
  89. 1636
  90.  
  91. fixed pat wt dof chisq tail prob
  92. 000 0 10 25.767 0.0040667 0.372 0.549 0.079
  93. 001 1 11 30.449 0.00134636 0.457 0.543 0.000
  94. 010 1 11 292.768 0 4.511 0.000 -3.511 infeasible
  95. 100 1 11 86.030 9.95202e-14 0.000 0.653 0.347
  96. 011 2 12 774.410 0 1.000 0.000 0.000
  97. 101 2 12 330.406 0 0.000 1.000 0.000
  98. 110 2 12 858.310 0 0.000 0.000 1.000
  99. best pat: 000 0.0040667 - -
  100. best pat: 100 9.95202e-14 chi(nested): 60.264 p-value for nested model: 8.29686e-15
  101. best pat: 101 1.89417e-63 chi(nested): 244.376 p-value for nested model: 4.37195e-55
  102.  
  103. coeffs: 0.372 0.549 0.079
  104.  
  105. ## dscore:: f_4(Base, Fit, Rbase, right2)
  106. ## genstat:: f_4(Base, Fit, right1, right2)
  107.  
  108. details: EHG Brazil_LapaDoSanto_9600BP 0.004144 12.063650
  109. details: Georgia_Kotias.SG Brazil_LapaDoSanto_9600BP -0.005594 -11.539541
  110. details: Russia_HG_Tyumen Brazil_LapaDoSanto_9600BP 0.008239 16.645294
  111. dscore: Brazil_LapaDoSanto_9600BP f4: -0.000876 Z: -2.614078
  112.  
  113. details: EHG China_Tianyuan 0.001734 4.217992
  114. details: Georgia_Kotias.SG China_Tianyuan -0.002827 -4.951275
  115. details: Russia_HG_Tyumen China_Tianyuan 0.002674 4.865841
  116. dscore: China_Tianyuan f4: -0.000695 Z: -1.772324
  117.  
  118. details: EHG Russia_Ust_Ishim.DG 0.000363 0.934153
  119. details: Georgia_Kotias.SG Russia_Ust_Ishim.DG -0.001513 -3.038177
  120. details: Russia_HG_Tyumen Russia_Ust_Ishim.DG 0.001786 3.393451
  121. dscore: Russia_Ust_Ishim.DG f4: -0.000554 Z: -1.577668
  122.  
  123. details: EHG Russia_Kostenki14 0.001941 4.562325
  124. details: Georgia_Kotias.SG Russia_Kostenki14 -0.003014 -5.475477
  125. details: Russia_HG_Tyumen Russia_Kostenki14 0.001403 2.499783
  126. dscore: Russia_Kostenki14 f4: -0.000820 Z: -2.153270
  127.  
  128. details: EHG Russia_MA1_HG.SG 0.005158 11.072647
  129. details: Georgia_Kotias.SG Russia_MA1_HG.SG -0.006997 -11.291360
  130. details: Russia_HG_Tyumen Russia_MA1_HG.SG 0.009494 14.684565
  131. dscore: Russia_MA1_HG.SG f4: -0.001169 Z: -2.779832
  132.  
  133. details: EHG Morocco_Iberomaurusian 0.000479 1.623962
  134. details: Georgia_Kotias.SG Morocco_Iberomaurusian -0.000621 -1.587618
  135. details: Russia_HG_Tyumen Morocco_Iberomaurusian -0.000073 -0.185420
  136. dscore: Morocco_Iberomaurusian f4: -0.000168 Z: -0.622761
  137.  
  138. details: EHG Italy_North_Villabruna_HG 0.005292 11.631472
  139. details: Georgia_Kotias.SG Italy_North_Villabruna_HG -0.005121 -8.487975
  140. details: Russia_HG_Tyumen Italy_North_Villabruna_HG -0.000451 -0.745480
  141. dscore: Italy_North_Villabruna_HG f4: -0.000875 Z: -2.103249
  142.  
  143. details: EHG Czech_Vestonice16 0.003020 6.892176
  144. details: Georgia_Kotias.SG Czech_Vestonice16 -0.003532 -5.911349
  145. details: Russia_HG_Tyumen Czech_Vestonice16 0.000590 1.057966
  146. dscore: Czech_Vestonice16 f4: -0.000767 Z: -1.858961
  147.  
  148. details: EHG Spain_ElMiron 0.003517 8.047402
  149. details: Georgia_Kotias.SG Spain_ElMiron -0.004151 -7.036604
  150. details: Russia_HG_Tyumen Spain_ElMiron 0.001253 1.996195
  151. dscore: Spain_ElMiron f4: -0.000869 Z: -2.138914
  152.  
  153. details: EHG Turkey_N -0.000676 -2.573488
  154. details: Georgia_Kotias.SG Turkey_N -0.000772 -2.070665
  155. details: Russia_HG_Tyumen Turkey_N -0.002983 -7.972403
  156. dscore: Turkey_N f4: -0.000911 Z: -3.612233
  157.  
  158. details: EHG Iran_GanjDareh_N -0.003364 -10.972158
  159. details: Georgia_Kotias.SG Iran_GanjDareh_N 0.000554 1.368005
  160. details: Russia_HG_Tyumen Iran_GanjDareh_N -0.002443 -5.996108
  161. dscore: Iran_GanjDareh_N f4: -0.001141 Z: -4.024730
  162.  
  163. details: EHG Irula.DG 0.000093 0.301732
  164. details: Georgia_Kotias.SG Irula.DG -0.000884 -2.169693
  165. details: Russia_HG_Tyumen Irula.DG 0.001337 3.242701
  166. dscore: Irula.DG f4: -0.000345 Z: -1.204347
  167.  
  168. gendstat: Mbuti.DG Brazil_LapaDoSanto_9600BP -2.614
  169. gendstat: Mbuti.DG China_Tianyuan -1.772
  170. gendstat: Mbuti.DG Russia_Ust_Ishim.DG -1.578
  171. gendstat: Mbuti.DG Russia_Kostenki14 -2.153
  172. gendstat: Mbuti.DG Russia_MA1_HG.SG -2.780
  173. gendstat: Mbuti.DG Morocco_Iberomaurusian -0.623
  174. gendstat: Mbuti.DG Italy_North_Villabruna_HG -2.103
  175. gendstat: Mbuti.DG Czech_Vestonice16 -1.859
  176. gendstat: Mbuti.DG Spain_ElMiron -2.139
  177. gendstat: Mbuti.DG Turkey_N -3.612
  178. gendstat: Mbuti.DG Iran_GanjDareh_N -4.025
  179. gendstat: Mbuti.DG Irula.DG -1.204
  180. gendstat: Brazil_LapaDoSanto_9600BP China_Tianyuan 0.450
  181. gendstat: Brazil_LapaDoSanto_9600BP Russia_Ust_Ishim.DG 0.793
  182. gendstat: Brazil_LapaDoSanto_9600BP Russia_Kostenki14 0.139
  183. gendstat: Brazil_LapaDoSanto_9600BP Russia_MA1_HG.SG -0.715
  184. gendstat: Brazil_LapaDoSanto_9600BP Morocco_Iberomaurusian 1.983
  185. gendstat: Brazil_LapaDoSanto_9600BP Italy_North_Villabruna_HG 0.002
  186. gendstat: Brazil_LapaDoSanto_9600BP Czech_Vestonice16 0.251
  187. gendstat: Brazil_LapaDoSanto_9600BP Spain_ElMiron 0.015
  188. gendstat: Brazil_LapaDoSanto_9600BP Turkey_N -0.108
  189. gendstat: Brazil_LapaDoSanto_9600BP Iran_GanjDareh_N -0.806
  190. gendstat: Brazil_LapaDoSanto_9600BP Irula.DG 1.559
  191. gendstat: China_Tianyuan Russia_Ust_Ishim.DG 0.320
  192. gendstat: China_Tianyuan Russia_Kostenki14 -0.279
  193. gendstat: China_Tianyuan Russia_MA1_HG.SG -1.001
  194. gendstat: China_Tianyuan Morocco_Iberomaurusian 1.253
  195. gendstat: China_Tianyuan Italy_North_Villabruna_HG -0.375
  196. gendstat: China_Tianyuan Czech_Vestonice16 -0.150
  197. gendstat: China_Tianyuan Spain_ElMiron -0.359
  198. gendstat: China_Tianyuan Turkey_N -0.578
  199. gendstat: China_Tianyuan Iran_GanjDareh_N -1.141
  200. gendstat: China_Tianyuan Irula.DG 0.876
  201. gendstat: Russia_Ust_Ishim.DG Russia_Kostenki14 -0.608
  202. gendstat: Russia_Ust_Ishim.DG Russia_MA1_HG.SG -1.335
  203. gendstat: Russia_Ust_Ishim.DG Morocco_Iberomaurusian 1.031
  204. gendstat: Russia_Ust_Ishim.DG Italy_North_Villabruna_HG -0.692
  205. gendstat: Russia_Ust_Ishim.DG Czech_Vestonice16 -0.478
  206. gendstat: Russia_Ust_Ishim.DG Spain_ElMiron -0.682
  207. gendstat: Russia_Ust_Ishim.DG Turkey_N -1.078
  208. gendstat: Russia_Ust_Ishim.DG Iran_GanjDareh_N -1.604
  209. gendstat: Russia_Ust_Ishim.DG Irula.DG 0.583
  210. gendstat: Russia_Kostenki14 Russia_MA1_HG.SG -0.767
  211. gendstat: Russia_Kostenki14 Morocco_Iberomaurusian 1.681
  212. gendstat: Russia_Kostenki14 Italy_North_Villabruna_HG -0.126
  213. gendstat: Russia_Kostenki14 Czech_Vestonice16 0.121
  214. gendstat: Russia_Kostenki14 Spain_ElMiron -0.110
  215. gendstat: Russia_Kostenki14 Turkey_N -0.259
  216. gendstat: Russia_Kostenki14 Iran_GanjDareh_N -0.849
  217. gendstat: Russia_Kostenki14 Irula.DG 1.198
  218. gendstat: Russia_MA1_HG.SG Morocco_Iberomaurusian 2.284
  219. gendstat: Russia_MA1_HG.SG Italy_North_Villabruna_HG 0.633
  220. gendstat: Russia_MA1_HG.SG Czech_Vestonice16 0.840
  221. gendstat: Russia_MA1_HG.SG Spain_ElMiron 0.619
  222. gendstat: Russia_MA1_HG.SG Turkey_N 0.654
  223. gendstat: Russia_MA1_HG.SG Iran_GanjDareh_N 0.068
  224. gendstat: Russia_MA1_HG.SG Irula.DG 2.073
  225. gendstat: Morocco_Iberomaurusian Italy_North_Villabruna_HG -1.698
  226. gendstat: Morocco_Iberomaurusian Czech_Vestonice16 -1.469
  227. gendstat: Morocco_Iberomaurusian Spain_ElMiron -1.719
  228. gendstat: Morocco_Iberomaurusian Turkey_N -2.861
  229. gendstat: Morocco_Iberomaurusian Iran_GanjDareh_N -3.076
  230. gendstat: Morocco_Iberomaurusian Irula.DG -0.534
  231. gendstat: Italy_North_Villabruna_HG Czech_Vestonice16 0.237
  232. gendstat: Italy_North_Villabruna_HG Spain_ElMiron 0.013
  233. gendstat: Italy_North_Villabruna_HG Turkey_N -0.101
  234. gendstat: Italy_North_Villabruna_HG Iran_GanjDareh_N -0.642
  235. gendstat: Italy_North_Villabruna_HG Irula.DG 1.289
  236. gendstat: Czech_Vestonice16 Spain_ElMiron -0.217
  237. gendstat: Czech_Vestonice16 Turkey_N -0.378
  238. gendstat: Czech_Vestonice16 Iran_GanjDareh_N -0.885
  239. gendstat: Czech_Vestonice16 Irula.DG 0.998
  240. gendstat: Spain_ElMiron Turkey_N -0.113
  241. gendstat: Spain_ElMiron Iran_GanjDareh_N -0.658
  242. gendstat: Spain_ElMiron Irula.DG 1.266
  243. gendstat: Turkey_N Iran_GanjDareh_N -0.949
  244. gendstat: Turkey_N Irula.DG 2.128
  245. gendstat: Iran_GanjDareh_N Irula.DG 2.712
  246.  
  247. ##end of qpAdm: 10.740 seconds cpu 1.032 Mbytes in use
  248.  
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