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ERROR ~ Cannot get property 'Galgal4' on null object

Tichaboni
Sep 11th, 2018
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  1. Sep-10 10:44:00.679 [main] DEBUG nextflow.cli.Launcher - $> /home/bkimathi/miniconda3/bin/nextflow run nf-core/rnaseq --reads *moja_{1,2}.fastq.gz --genome Galgal4 --max_memory 12.GB --aligner hisat2 --hisatBuildMemory 1 --hisat2index /media/bkimathi/FreeAgent_Drive/Reads_Genome_Annotation/kuku_index/kuku_index.*.ht2 --saveReference -profile standard,docker -resume
  2. Sep-10 10:44:00.937 [main] INFO nextflow.cli.CmdRun - N E X T F L O W ~ version 0.31.1
  3. Sep-10 10:44:01.290 [main] DEBUG nextflow.scm.AssetManager - Git config: /home/bkimathi/miniconda3/share/nextflow/assets/nf-core/rnaseq/.git/config; branch: master; remote: origin; url: https://github.com/nf-core/rnaseq.git
  4. Sep-10 10:44:01.431 [main] DEBUG nextflow.scm.AssetManager - Git config: /home/bkimathi/miniconda3/share/nextflow/assets/nf-core/rnaseq/.git/config; branch: master; remote: origin; url: https://github.com/nf-core/rnaseq.git
  5. Sep-10 10:44:01.481 [main] DEBUG nextflow.scm.AssetManager - Git config: /home/bkimathi/miniconda3/share/nextflow/assets/nf-core/rnaseq/.git/config; branch: master; remote: origin; url: https://github.com/nf-core/rnaseq.git
  6. Sep-10 10:44:01.481 [main] INFO nextflow.cli.CmdRun - Launching `nf-core/rnaseq` [stoic_keller] - revision: 44f1525d7a [master]
  7. Sep-10 10:44:02.861 [main] DEBUG nextflow.config.ConfigBuilder - Found config base: /home/bkimathi/miniconda3/share/nextflow/assets/nf-core/rnaseq/nextflow.config
  8. Sep-10 10:44:02.862 [main] DEBUG nextflow.config.ConfigBuilder - Found config local: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/nextflow.config
  9. Sep-10 10:44:02.862 [main] DEBUG nextflow.config.ConfigBuilder - Parsing config file: /home/bkimathi/miniconda3/share/nextflow/assets/nf-core/rnaseq/nextflow.config
  10. Sep-10 10:44:02.862 [main] DEBUG nextflow.config.ConfigBuilder - Parsing config file: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/nextflow.config
  11. Sep-10 10:44:02.867 [main] DEBUG nextflow.config.ConfigBuilder - Applying config profile: `standard,docker`
  12. Sep-10 10:44:03.075 [main] DEBUG nextflow.config.ConfigBuilder - Applying config profile: `standard,docker`
  13. Sep-10 10:44:03.085 [main] DEBUG nextflow.config.ConfigBuilder - Available config profiles: [standard, hebbe, cfc, uppmax_devel, test, uppmax, none, docker, gis, ccga, conda, singularity, uct_hex, awsbatch, uppmax_modules, binac]
  14. Sep-10 10:44:03.104 [main] DEBUG nextflow.Session - Session uuid: 7fea9b89-3931-43e9-ad02-a72c5dd22f2a
  15. Sep-10 10:44:03.104 [main] DEBUG nextflow.Session - Run name: stoic_keller
  16. Sep-10 10:44:03.105 [main] DEBUG nextflow.Session - Executor pool size: 8
  17. Sep-10 10:44:03.111 [main] DEBUG nextflow.cli.CmdRun -
  18. Version: 0.31.1 build 4886
  19. Modified: 07-08-2018 15:53 UTC (10:53 CDT)
  20. System: Linux 4.15.0-33-generic
  21. Runtime: Groovy 2.4.15 on OpenJDK 64-Bit Server VM 1.8.0_121-b15
  22. Encoding: UTF-8 (UTF-8)
  23. Process: 9682@bkimathi-ThinkCentre-M910z [127.0.1.1]
  24. CPUs: 8 - Mem: 15.6 GB (4.9 GB) - Swap: 2 GB (2 GB)
  25. Sep-10 10:44:03.121 [main] DEBUG nextflow.Session - Work-dir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work [fuseblk]
  26. Sep-10 10:44:03.796 [main] DEBUG nextflow.Session - Session start invoked
  27. Sep-10 10:44:03.798 [main] DEBUG nextflow.processor.TaskDispatcher - Dispatcher > start
  28. Sep-10 10:44:03.799 [main] DEBUG nextflow.trace.TraceFileObserver - Flow starting -- trace file: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/results/pipeline_info/pipeline_info/nfcore-rnaseq_trace.txt
  29. Sep-10 10:44:03.805 [main] DEBUG nextflow.script.ScriptRunner - > Script parsing
  30. Sep-10 10:44:04.124 [main] DEBUG nextflow.script.ScriptRunner - > Launching execution
  31. Sep-10 10:44:04.145 [main] DEBUG nextflow.file.FileHelper - Creating a file system instance for provider: S3FileSystemProvider
  32. Sep-10 10:44:04.149 [main] DEBUG nextflow.file.FileHelper - AWS S3 config details: {}
  33. Sep-10 10:44:14.397 [main] DEBUG nextflow.file.PathVisitor - files for syntax: glob; folder: ./; pattern: *moja_{1,2}.fastq.gz; options: [:]
  34. Sep-10 10:44:14.407 [main] INFO nextflow.Nextflow - =======================================================
  35. ,--./,-.
  36. ___ __ __ __ ___ /,-._.--~'
  37. |\ | |__ __ / ` / \ |__) |__ } {
  38. | \| | \__, \__/ | \ |___ \`-._,-`-,
  39. `._,._,'
  40.  
  41. nf-core/rnaseq : RNA-Seq Best Practice v1.0
  42. =======================================================
  43. Sep-10 10:44:14.409 [main] INFO nextflow.Nextflow - Run Name : stoic_keller
  44. Reads : *moja_{1,2}.fastq.gz
  45. Data Type : Paired-End
  46. Genome : Galgal4
  47. Strandedness : None
  48. Trim R1 : 0
  49. Trim R2 : 0
  50. Trim 3' R1 : 0
  51. Trim 3' R2 : 0
  52. Aligner : HISAT2
  53. Fasta Ref : s3://ngi-igenomes/igenomes//Gallus_gallus/Ensembl/Galgal4/Sequence/WholeGenomeFasta/genome.fa
  54. GTF Annotation : s3://ngi-igenomes/igenomes//Gallus_gallus/Ensembl/Galgal4/Annotation/Genes/genes.gtf
  55. BED Annotation : s3://ngi-igenomes/igenomes//Gallus_gallus/Ensembl/Galgal4/Annotation/Genes/genes.bed
  56. Save Reference : Yes
  57. Save Trimmed : No
  58. Save Intermeds : No
  59. Max Memory : 12.GB
  60. Max CPUs : 16
  61. Max Time : 10d
  62. Output dir : ./results
  63. Working dir : /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work
  64. Container : nfcore/rnaseq:1.0
  65. Pipeline Release: master
  66. Current home : /home/bkimathi
  67. Current user : bkimathi
  68. Current path : /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation
  69. Script dir : /home/bkimathi/miniconda3/share/nextflow/assets/nf-core/rnaseq
  70. Config Profile : standard,docker
  71. Sep-10 10:44:14.409 [main] INFO nextflow.Nextflow - =========================================
  72. Sep-10 10:44:14.456 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  73. Sep-10 10:44:14.456 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  74. Sep-10 10:44:14.459 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  75. Sep-10 10:44:14.460 [main] INFO nextflow.executor.Executor - [warm up] executor > local
  76. Sep-10 10:44:14.462 [main] DEBUG n.processor.LocalPollingMonitor - Creating local task monitor for executor 'local' > cpus=8; memory=15.6 GB; capacity=8; pollInterval=100ms; dumpInterval=5m
  77. Sep-10 10:44:14.465 [main] DEBUG nextflow.processor.TaskDispatcher - Starting monitor: LocalPollingMonitor
  78. Sep-10 10:44:14.466 [main] DEBUG n.processor.TaskPollingMonitor - >>> barrier register (monitor: local)
  79. Sep-10 10:44:14.467 [main] DEBUG nextflow.executor.Executor - Invoke register for executor: local
  80. Sep-10 10:44:14.485 [main] DEBUG nextflow.Session - >>> barrier register (process: makeHisatSplicesites)
  81. Sep-10 10:44:14.486 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > makeHisatSplicesites -- maxForks: 8
  82. Sep-10 10:44:14.503 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:makeHISATindex` matches process makeHISATindex
  83. Sep-10 10:44:14.504 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  84. Sep-10 10:44:14.505 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  85. Sep-10 10:44:14.505 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  86. Sep-10 10:44:14.506 [main] DEBUG nextflow.Session - >>> barrier register (process: makeHISATindex)
  87. Sep-10 10:44:14.506 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > makeHISATindex -- maxForks: 8
  88. Sep-10 10:44:14.516 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  89. Sep-10 10:44:14.516 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  90. Sep-10 10:44:14.517 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  91. Sep-10 10:44:14.517 [main] DEBUG nextflow.Session - >>> barrier register (process: fastqc)
  92. Sep-10 10:44:14.518 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > fastqc -- maxForks: 8
  93. Sep-10 10:44:14.521 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:trim_galore` matches process trim_galore
  94. Sep-10 10:44:14.521 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  95. Sep-10 10:44:14.521 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  96. Sep-10 10:44:14.522 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  97. Sep-10 10:44:14.522 [main] DEBUG nextflow.Session - >>> barrier register (process: trim_galore)
  98. Sep-10 10:44:14.524 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > trim_galore -- maxForks: 8
  99. Sep-10 10:44:14.540 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:hisat2Align` matches process hisat2Align
  100. Sep-10 10:44:14.541 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  101. Sep-10 10:44:14.541 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  102. Sep-10 10:44:14.541 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  103. Sep-10 10:44:14.542 [main] DEBUG nextflow.Session - >>> barrier register (process: hisat2Align)
  104. Sep-10 10:44:14.542 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > hisat2Align -- maxForks: 8
  105. Sep-10 10:44:14.547 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:hisat2_sortOutput` matches process hisat2_sortOutput
  106. Sep-10 10:44:14.548 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  107. Sep-10 10:44:14.549 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  108. Sep-10 10:44:14.549 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  109. Sep-10 10:44:14.549 [main] DEBUG nextflow.Session - >>> barrier register (process: hisat2_sortOutput)
  110. Sep-10 10:44:14.550 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > hisat2_sortOutput -- maxForks: 8
  111. Sep-10 10:44:14.554 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:rseqc` matches process rseqc
  112. Sep-10 10:44:14.554 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  113. Sep-10 10:44:14.554 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  114. Sep-10 10:44:14.554 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  115. Sep-10 10:44:14.555 [main] DEBUG nextflow.Session - >>> barrier register (process: rseqc)
  116. Sep-10 10:44:14.555 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > rseqc -- maxForks: 8
  117. Sep-10 10:44:14.558 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:createBigWig` matches process createBigWig
  118. Sep-10 10:44:14.559 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  119. Sep-10 10:44:14.559 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  120. Sep-10 10:44:14.559 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  121. Sep-10 10:44:14.560 [main] DEBUG nextflow.Session - >>> barrier register (process: createBigWig)
  122. Sep-10 10:44:14.561 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > createBigWig -- maxForks: 8
  123. Sep-10 10:44:14.565 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:genebody_coverage` matches process genebody_coverage
  124. Sep-10 10:44:14.566 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  125. Sep-10 10:44:14.566 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  126. Sep-10 10:44:14.566 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  127. Sep-10 10:44:14.567 [main] DEBUG nextflow.Session - >>> barrier register (process: genebody_coverage)
  128. Sep-10 10:44:14.567 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > genebody_coverage -- maxForks: 8
  129. Sep-10 10:44:14.570 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  130. Sep-10 10:44:14.570 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  131. Sep-10 10:44:14.570 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  132. Sep-10 10:44:14.571 [main] DEBUG nextflow.Session - >>> barrier register (process: preseq)
  133. Sep-10 10:44:14.571 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > preseq -- maxForks: 8
  134. Sep-10 10:44:14.576 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:markDuplicates` matches process markDuplicates
  135. Sep-10 10:44:14.577 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  136. Sep-10 10:44:14.577 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  137. Sep-10 10:44:14.578 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  138. Sep-10 10:44:14.578 [main] DEBUG nextflow.Session - >>> barrier register (process: markDuplicates)
  139. Sep-10 10:44:14.578 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > markDuplicates -- maxForks: 8
  140. Sep-10 10:44:14.582 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:dupradar` matches process dupradar
  141. Sep-10 10:44:14.582 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  142. Sep-10 10:44:14.583 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  143. Sep-10 10:44:14.583 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  144. Sep-10 10:44:14.583 [main] DEBUG nextflow.Session - >>> barrier register (process: dupradar)
  145. Sep-10 10:44:14.583 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > dupradar -- maxForks: 8
  146. Sep-10 10:44:14.588 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:featureCounts` matches process featureCounts
  147. Sep-10 10:44:14.589 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  148. Sep-10 10:44:14.589 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  149. Sep-10 10:44:14.589 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  150. Sep-10 10:44:14.589 [main] DEBUG nextflow.Session - >>> barrier register (process: featureCounts)
  151. Sep-10 10:44:14.590 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > featureCounts -- maxForks: 8
  152. Sep-10 10:44:14.593 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  153. Sep-10 10:44:14.594 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  154. Sep-10 10:44:14.594 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  155. Sep-10 10:44:14.594 [main] DEBUG nextflow.Session - >>> barrier register (process: merge_featureCounts)
  156. Sep-10 10:44:14.594 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > merge_featureCounts -- maxForks: 8
  157. Sep-10 10:44:14.598 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  158. Sep-10 10:44:14.598 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  159. Sep-10 10:44:14.599 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  160. Sep-10 10:44:14.599 [main] DEBUG nextflow.Session - >>> barrier register (process: stringtieFPKM)
  161. Sep-10 10:44:14.599 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > stringtieFPKM -- maxForks: 8
  162. Sep-10 10:44:14.611 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:sample_correlation` matches process sample_correlation
  163. Sep-10 10:44:14.612 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  164. Sep-10 10:44:14.612 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  165. Sep-10 10:44:14.612 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  166. Sep-10 10:44:14.614 [main] DEBUG nextflow.Session - >>> barrier register (process: sample_correlation)
  167. Sep-10 10:44:14.614 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > sample_correlation -- maxForks: 8
  168. Sep-10 10:44:14.618 [Actor Thread 5] INFO nextflow.processor.TaskProcessor - [25/1cc3ac] Cached process > fastqc (SRR)
  169. Sep-10 10:44:14.618 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:get_software_versions` matches process get_software_versions
  170. Sep-10 10:44:14.618 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  171. Sep-10 10:44:14.618 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  172. Sep-10 10:44:14.618 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  173. Sep-10 10:44:14.619 [main] DEBUG nextflow.Session - >>> barrier register (process: get_software_versions)
  174. Sep-10 10:44:14.619 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > get_software_versions -- maxForks: 8
  175. Sep-10 10:44:14.620 [Actor Thread 7] INFO nextflow.processor.TaskProcessor - [1c/fc729c] Cached process > trim_galore (SRR)
  176. Sep-10 10:44:14.621 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:workflow_summary_mqc` matches process workflow_summary_mqc
  177. Sep-10 10:44:14.622 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  178. Sep-10 10:44:14.622 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  179. Sep-10 10:44:14.622 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  180. Sep-10 10:44:14.622 [main] DEBUG nextflow.Session - >>> barrier register (process: workflow_summary_mqc)
  181. Sep-10 10:44:14.623 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > workflow_summary_mqc -- maxForks: 8
  182. Sep-10 10:44:14.640 [main] DEBUG nextflow.util.CacheHelper - Config settings `withName:multiqc` matches process multiqc
  183. Sep-10 10:44:14.640 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  184. Sep-10 10:44:14.640 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  185. Sep-10 10:44:14.640 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  186. Sep-10 10:44:14.641 [main] DEBUG nextflow.Session - >>> barrier register (process: multiqc)
  187. Sep-10 10:44:14.641 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > multiqc -- maxForks: 8
  188. Sep-10 10:44:14.644 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
  189. Sep-10 10:44:14.644 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
  190. Sep-10 10:44:14.644 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
  191. Sep-10 10:44:14.644 [main] DEBUG nextflow.Session - >>> barrier register (process: output_documentation)
  192. Sep-10 10:44:14.644 [main] DEBUG nextflow.processor.TaskProcessor - Creating operator > output_documentation -- maxForks: 8
  193. Sep-10 10:44:14.645 [main] DEBUG nextflow.script.ScriptRunner - > Await termination
  194. Sep-10 10:44:14.646 [main] DEBUG nextflow.Session - Session await
  195. Sep-10 10:44:14.652 [Actor Thread 14] INFO nextflow.processor.TaskProcessor - [6c/0dae49] Cached process > output_documentation
  196. Sep-10 10:44:14.653 [Task submitter] INFO nextflow.Session - [11/c770a4] Submitted process > workflow_summary_mqc
  197. Sep-10 10:44:14.663 [Actor Thread 1] DEBUG nextflow.Session - <<< barrier arrive (process: output_documentation)
  198. Sep-10 10:44:14.664 [Actor Thread 12] DEBUG nextflow.Session - <<< barrier arrive (process: trim_galore)
  199. Sep-10 10:44:14.663 [Actor Thread 11] DEBUG nextflow.Session - <<< barrier arrive (process: fastqc)
  200. Sep-10 10:44:14.667 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 5; name: workflow_summary_mqc; status: COMPLETED; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/11/c770a41dc8cfeacfa89817e7e9d968]
  201. Sep-10 10:44:14.673 [Actor Thread 11] DEBUG nextflow.Session - <<< barrier arrive (process: workflow_summary_mqc)
  202. Sep-10 10:44:14.879 [Task submitter] DEBUG nextflow.executor.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run
  203. Sep-10 10:44:14.880 [Task submitter] INFO nextflow.Session - [23/dfac39] Submitted process > get_software_versions
  204. Sep-10 10:44:17.469 [Actor Thread 4] INFO nextflow.processor.TaskProcessor - [26/6f26b7] Cached process > makeHisatSplicesites (genes.gtf)
  205. Sep-10 10:44:17.472 [Actor Thread 1] DEBUG nextflow.Session - <<< barrier arrive (process: makeHisatSplicesites)
  206. Sep-10 10:44:17.474 [Actor Thread 8] INFO nextflow.Nextflow - [HISAT2 index build] Available memory: 12 GB
  207. Sep-10 10:44:17.474 [Actor Thread 8] INFO nextflow.Nextflow - [HISAT2 index build] Over 1 GB available, so using splice sites and exons in HISAT2 index
  208. Sep-10 10:44:21.212 [Task monitor] DEBUG n.processor.TaskPollingMonitor - Task completed > TaskHandler[id: 4; name: get_software_versions; status: COMPLETED; exit: 0; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/23/dfac3974129ac645836c53c812f622]
  209. Sep-10 10:44:21.214 [Actor Thread 1] DEBUG nextflow.Session - <<< barrier arrive (process: get_software_versions)
  210. Sep-10 10:44:23.738 [Actor Thread 8] INFO nextflow.processor.TaskProcessor - [9c/3e947f] Cached process > makeHISATindex (genome.fa)
  211. Sep-10 10:44:23.739 [Actor Thread 11] DEBUG nextflow.Session - <<< barrier arrive (process: makeHISATindex)
  212. Sep-10 10:44:23.760 [Task submitter] DEBUG nextflow.executor.LocalTaskHandler - Launch cmd line: /bin/bash -ue .command.run
  213. Sep-10 10:44:23.760 [Task submitter] INFO nextflow.Session - [16/0f5b74] Submitted process > hisat2Align (SRRmoja_1)
  214. Sep-10 10:49:14.661 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  215. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  216. Sep-10 10:54:14.694 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  217. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  218. Sep-10 10:59:14.727 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  219. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  220. Sep-10 11:04:14.746 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  221. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  222. Sep-10 11:09:14.778 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  223. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  224. Sep-10 11:14:14.800 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  225. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  226. Sep-10 11:19:14.830 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  227. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  228. Sep-10 11:24:14.859 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  229. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  230. Sep-10 11:29:14.881 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  231. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  232. Sep-10 11:34:14.901 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  233. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  234. Sep-10 11:39:14.912 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  235. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  236. Sep-10 11:44:14.929 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  237. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  238. Sep-10 11:49:14.949 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  239. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  240. Sep-10 11:54:14.970 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  241. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  242. Sep-10 11:59:14.991 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  243. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  244. Sep-10 12:04:15.012 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  245. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  246. Sep-10 12:09:15.032 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  247. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  248. Sep-10 12:14:15.090 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  249. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  250. Sep-10 12:19:15.123 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  251. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  252. Sep-10 12:24:15.144 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  253. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  254. Sep-10 12:29:15.167 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  255. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  256. Sep-10 12:34:15.226 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  257. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  258. Sep-10 12:39:15.257 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  259. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  260. Sep-10 12:44:15.289 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  261. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  262. Sep-10 12:49:15.326 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  263. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  264. Sep-10 12:54:15.363 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  265. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  266. Sep-10 12:59:15.421 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  267. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  268. Sep-10 13:04:15.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  269. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  270. Sep-10 13:09:15.518 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  271. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  272. Sep-10 13:14:15.571 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  273. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  274. Sep-10 13:19:15.615 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  275. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  276. Sep-10 13:24:15.664 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  277. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  278. Sep-10 13:29:15.707 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  279. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  280. Sep-10 13:34:15.756 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  281. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  282. Sep-10 13:39:15.800 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  283. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  284. Sep-10 13:44:15.835 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  285. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  286. Sep-10 13:49:15.856 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  287. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  288. Sep-10 13:54:15.879 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  289. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  290. Sep-10 13:59:15.904 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  291. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  292. Sep-10 14:04:15.922 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  293. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  294. Sep-10 14:09:15.944 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  295. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  296. Sep-10 14:14:15.960 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  297. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  298. Sep-10 14:19:15.968 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  299. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  300. Sep-10 14:24:15.976 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  301. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  302. Sep-10 14:29:15.983 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  303. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  304. Sep-10 14:34:15.992 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  305. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  306. Sep-10 14:39:15.999 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  307. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  308. Sep-10 14:44:16.003 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  309. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  310. Sep-10 14:49:16.004 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  311. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  312. Sep-10 14:54:16.020 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  313. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  314. Sep-10 14:59:16.031 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  315. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  316. Sep-10 15:04:16.050 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  317. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  318. Sep-10 15:09:16.074 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  319. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  320. Sep-10 15:14:16.100 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  321. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  322. Sep-10 15:19:16.114 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  323. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  324. Sep-10 15:24:16.124 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  325. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  326. Sep-10 15:29:16.131 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  327. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  328. Sep-10 15:34:16.134 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  329. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  330. Sep-10 15:39:16.147 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  331. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  332. Sep-10 15:44:16.167 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  333. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  334. Sep-10 15:49:16.180 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  335. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  336. Sep-10 15:54:16.200 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  337. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  338. Sep-10 15:59:16.222 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  339. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  340. Sep-10 16:04:16.238 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  341. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  342. Sep-10 16:09:16.253 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  343. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  344. Sep-10 16:14:16.263 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  345. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  346. Sep-10 16:19:16.283 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  347. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  348. Sep-10 16:24:16.303 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  349. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  350. Sep-10 16:29:16.322 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  351. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  352. Sep-10 16:34:16.372 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  353. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  354. Sep-10 16:39:16.457 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  355. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  356. Sep-10 16:44:16.515 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  357. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  358. Sep-10 16:49:16.592 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  359. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  360. Sep-10 16:54:16.611 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  361. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  362. Sep-10 16:59:16.618 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  363. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  364. Sep-10 17:04:16.629 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  365. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  366. Sep-10 17:09:16.629 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  367. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  368. Sep-10 17:14:16.637 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  369. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  370. Sep-10 17:19:16.652 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  371. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  372. Sep-10 17:24:16.667 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  373. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  374. Sep-10 17:29:16.680 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  375. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  376. Sep-10 17:34:16.685 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  377. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  378. Sep-10 17:39:16.692 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  379. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  380. Sep-10 17:44:16.706 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  381. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  382. Sep-10 17:49:16.709 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  383. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  384. Sep-10 17:54:16.715 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  385. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  386. Sep-10 17:59:16.725 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  387. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  388. Sep-10 18:04:16.734 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  389. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  390. Sep-10 18:09:16.744 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  391. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  392. Sep-10 18:14:16.755 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  393. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  394. Sep-10 18:19:16.763 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  395. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  396. Sep-10 18:24:16.778 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  397. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  398. Sep-10 18:29:16.786 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  399. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  400. Sep-10 18:34:16.790 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  401. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  402. Sep-10 18:39:16.801 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  403. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  404. Sep-10 18:44:16.807 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  405. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  406. Sep-10 18:49:16.825 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  407. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  408. Sep-10 18:54:16.837 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  409. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  410. Sep-10 18:59:16.849 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  411. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  412. Sep-10 19:04:16.854 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  413. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  414. Sep-10 19:09:16.866 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  415. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  416. Sep-10 19:14:16.884 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  417. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  418. Sep-10 19:19:16.893 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  419. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  420. Sep-10 19:24:16.898 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  421. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  422. Sep-10 19:29:16.911 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  423. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  424. Sep-10 19:34:16.939 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  425. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  426. Sep-10 19:39:16.956 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  427. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  428. Sep-10 19:44:17.031 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  429. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  430. Sep-10 19:49:17.107 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  431. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  432. Sep-10 19:54:17.139 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  433. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  434. Sep-10 19:59:17.153 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  435. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  436. Sep-10 20:04:17.162 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  437. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  438. Sep-10 20:09:17.174 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  439. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  440. Sep-10 20:14:17.196 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  441. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  442. Sep-10 20:19:17.212 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  443. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  444. Sep-10 20:24:17.237 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  445. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  446. Sep-10 20:29:17.243 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  447. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  448. Sep-10 20:34:17.268 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  449. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  450. Sep-10 20:39:17.295 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  451. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  452. Sep-10 20:44:17.328 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  453. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  454. Sep-10 20:49:17.351 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  455. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  456. Sep-10 20:54:17.389 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  457. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  458. Sep-10 20:59:17.412 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  459. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  460. Sep-10 21:04:17.438 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  461. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  462. Sep-10 21:09:17.449 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  463. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  464. Sep-10 21:14:17.462 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  465. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  466. Sep-10 21:19:17.493 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  467. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  468. Sep-10 21:24:17.523 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  469. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  470. Sep-10 21:29:17.533 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  471. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  472. Sep-10 21:34:17.536 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  473. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  474. Sep-10 21:39:17.547 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  475. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  476. Sep-10 21:44:17.559 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  477. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  478. Sep-10 21:49:17.570 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  479. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  480. Sep-10 21:54:17.582 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  481. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  482. Sep-10 21:59:17.595 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  483. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  484. Sep-10 22:04:17.601 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  485. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  486. Sep-10 22:09:17.613 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  487. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  488. Sep-10 22:14:17.614 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  489. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  490. Sep-10 22:19:17.624 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  491. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  492. Sep-10 22:24:17.632 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  493. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  494. Sep-10 22:29:17.644 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  495. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  496. Sep-10 22:34:17.649 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  497. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  498. Sep-10 22:39:17.659 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  499. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  500. Sep-10 22:44:17.666 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  501. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  502. Sep-10 22:49:17.674 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  503. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  504. Sep-10 22:54:17.684 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  505. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  506. Sep-10 22:59:17.698 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  507. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  508. Sep-10 23:04:17.705 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  509. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  510. Sep-10 23:09:17.711 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  511. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  512. Sep-10 23:14:17.724 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  513. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  514. Sep-10 23:19:17.729 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  515. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  516. Sep-10 23:24:17.743 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  517. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  518. Sep-10 23:29:17.752 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  519. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  520. Sep-10 23:34:17.761 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  521. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  522. Sep-10 23:39:17.775 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  523. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  524. Sep-10 23:44:17.781 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  525. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  526. Sep-10 23:49:17.790 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  527. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  528. Sep-10 23:54:17.800 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  529. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  530. Sep-10 23:59:17.810 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  531. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  532. Sep-11 00:04:17.818 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  533. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  534. Sep-11 00:09:17.826 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  535. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  536. Sep-11 00:14:17.836 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  537. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  538. Sep-11 00:19:17.851 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  539. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  540. Sep-11 00:24:17.864 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  541. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  542. Sep-11 00:29:17.875 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  543. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  544. Sep-11 00:34:17.883 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  545. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  546. Sep-11 00:39:17.900 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  547. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  548. Sep-11 00:44:17.915 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  549. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  550. Sep-11 00:49:17.938 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  551. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  552. Sep-11 00:54:17.952 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  553. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  554. Sep-11 00:59:17.962 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  555. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  556. Sep-11 01:04:17.976 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  557. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  558. Sep-11 01:09:17.990 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  559. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  560. Sep-11 01:14:18.000 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  561. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  562. Sep-11 01:19:18.016 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  563. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  564. Sep-11 01:24:18.043 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  565. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  566. Sep-11 01:29:18.060 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  567. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  568. Sep-11 01:34:18.072 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  569. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  570. Sep-11 01:39:18.083 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  571. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  572. Sep-11 01:44:18.094 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  573. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  574. Sep-11 01:49:18.105 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  575. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  576. Sep-11 01:54:18.110 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  577. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  578. Sep-11 01:59:18.119 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  579. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  580. Sep-11 02:04:18.128 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  581. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  582. Sep-11 02:09:18.147 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  583. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  584. Sep-11 02:14:18.149 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  585. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  586. Sep-11 02:19:18.159 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  587. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  588. Sep-11 02:24:18.171 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  589. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  590. Sep-11 02:29:18.184 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  591. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  592. Sep-11 02:34:18.194 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  593. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  594. Sep-11 02:39:18.199 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  595. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  596. Sep-11 02:44:18.215 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  597. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  598. Sep-11 02:49:18.225 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  599. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  600. Sep-11 02:54:18.233 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  601. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  602. Sep-11 02:59:18.243 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  603. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  604. Sep-11 03:04:18.256 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  605. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  606. Sep-11 03:09:18.264 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  607. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  608. Sep-11 03:14:18.277 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  609. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  610. Sep-11 03:19:18.287 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  611. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  612. Sep-11 03:24:18.301 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  613. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  614. Sep-11 03:29:18.319 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  615. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  616. Sep-11 03:34:18.342 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  617. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  618. Sep-11 03:39:18.354 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  619. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  620. Sep-11 03:44:18.373 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  621. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  622. Sep-11 03:49:18.386 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  623. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  624. Sep-11 03:54:18.401 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  625. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  626. Sep-11 03:59:18.413 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  627. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  628. Sep-11 04:04:18.423 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  629. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  630. Sep-11 04:09:18.436 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  631. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  632. Sep-11 04:14:18.448 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  633. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  634. Sep-11 04:19:18.464 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  635. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  636. Sep-11 04:24:18.476 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  637. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  638. Sep-11 04:29:18.487 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  639. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  640. Sep-11 04:34:18.555 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  641. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  642. Sep-11 04:39:18.575 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  643. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  644. Sep-11 04:44:18.674 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  645. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  646. Sep-11 04:49:18.695 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  647. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  648. Sep-11 04:54:18.708 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  649. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  650. Sep-11 04:59:18.718 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  651. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  652. Sep-11 05:04:18.730 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  653. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  654. Sep-11 05:09:18.736 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  655. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  656. Sep-11 05:14:18.746 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  657. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  658. Sep-11 05:19:18.762 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  659. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  660. Sep-11 05:24:18.783 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  661. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  662. Sep-11 05:29:18.789 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  663. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  664. Sep-11 05:34:18.796 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  665. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  666. Sep-11 05:39:18.809 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  667. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  668. Sep-11 05:44:18.818 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  669. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  670. Sep-11 05:49:18.826 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  671. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  672. Sep-11 05:54:18.841 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  673. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  674. Sep-11 05:59:18.850 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  675. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  676. Sep-11 06:04:18.864 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  677. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  678. Sep-11 06:09:18.880 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  679. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  680. Sep-11 06:14:18.890 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  681. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  682. Sep-11 06:19:18.896 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  683. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  684. Sep-11 06:24:18.908 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  685. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  686. Sep-11 06:29:18.920 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  687. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  688. Sep-11 06:34:18.932 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  689. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  690. Sep-11 06:39:18.939 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  691. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  692. Sep-11 06:44:18.949 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  693. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  694. Sep-11 06:49:18.958 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  695. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  696. Sep-11 06:54:18.961 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  697. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  698. Sep-11 06:59:18.968 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  699. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  700. Sep-11 07:04:18.969 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  701. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  702. Sep-11 07:09:18.985 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  703. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  704. Sep-11 07:14:18.998 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  705. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  706. Sep-11 07:19:19.003 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  707. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  708. Sep-11 07:24:19.015 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  709. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  710. Sep-11 07:29:19.017 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  711. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  712. Sep-11 07:34:19.033 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  713. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  714. Sep-11 07:39:19.042 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  715. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  716. Sep-11 07:44:19.053 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  717. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  718. Sep-11 07:49:19.067 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  719. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  720. Sep-11 07:54:19.077 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  721. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  722. Sep-11 07:59:19.085 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  723. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  724. Sep-11 08:04:19.093 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  725. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  726. Sep-11 08:09:19.097 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  727. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  728. Sep-11 08:14:19.101 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  729. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  730. Sep-11 08:19:19.112 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  731. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  732. Sep-11 08:24:19.123 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  733. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  734. Sep-11 08:29:19.131 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  735. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  736. Sep-11 08:34:19.144 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  737. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  738. Sep-11 08:39:19.153 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  739. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  740. Sep-11 08:44:19.161 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  741. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  742. Sep-11 08:49:19.176 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  743. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  744. Sep-11 08:54:19.196 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  745. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  746. Sep-11 08:59:19.220 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  747. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  748. Sep-11 09:04:19.234 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  749. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  750. Sep-11 09:09:19.249 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  751. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  752. Sep-11 09:14:19.259 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  753. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  754. Sep-11 09:19:19.278 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  755. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  756. Sep-11 09:24:19.302 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  757. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  758. Sep-11 09:29:19.325 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  759. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  760. Sep-11 09:34:19.372 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  761. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  762. Sep-11 09:39:19.420 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  763. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  764. Sep-11 09:44:19.458 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  765. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  766. Sep-11 09:49:19.508 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  767. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  768. Sep-11 09:54:19.561 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  769. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  770. Sep-11 09:59:19.597 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  771. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  772. Sep-11 10:04:19.642 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  773. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  774. Sep-11 10:09:19.683 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  775. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  776. Sep-11 10:14:19.737 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  777. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  778. Sep-11 10:19:19.782 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  779. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
  780. Sep-11 10:24:19.828 [Task monitor] DEBUG n.processor.TaskPollingMonitor - !! executor local > tasks to be completed: 1 -- pending tasks are shown below
  781. ~> TaskHandler[id: 8; name: hisat2Align (SRRmoja_1); status: RUNNING; exit: -; error: -; workDir: /media/bkimathi/FreeAgentDrive/Reads_Genome_Annotation/work/16/0f5b7492ec2e3446e4d276885edc5f]
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