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- checking build system type... x86_64-pc-linux-gnu
- checking host system type... x86_64-pc-linux-gnu
- loading site script './config.site'
- loading build-specific script './config.site'
- checking for pwd... /bin/pwd
- checking whether builddir is srcdir... yes
- checking whether ln -s works... yes
- checking for ar... ar
- checking for a BSD-compatible install... /usr/bin/install -c
- checking for sed... /bin/sed
- checking for which... /usr/bin/which
- checking for /usr/bin/pager... /usr/bin/pager
- checking for gtar... no
- checking for gnutar... no
- checking for tar... /bin/tar
- checking for tex... /usr/bin/tex
- checking for pdftex... /usr/bin/pdftex
- checking for pdflatex... /usr/bin/pdflatex
- checking for makeindex... /usr/bin/makeindex
- checking for texi2any... /usr/bin/texi2any
- checking whether texi2any version is at least 5.1... yes
- checking for ginstall-info... /usr/bin/ginstall-info
- checking for texi2dvi... /usr/bin/texi2dvi
- checking for kpsewhich... /usr/bin/kpsewhich
- checking for latex inconsolata package... found zi4.sty
- checking for unzip... /usr/bin/unzip
- checking for zip... /usr/bin/zip
- checking for gzip... /bin/gzip
- checking for bzip2... /bin/bzip2
- using default browser ... xdg-open
- checking for acroread... /usr/bin/acroread
- checking for working aclocal... found
- checking for working autoconf... found
- checking for working autoheader... found
- checking for bison... bison -y
- checking for notangle... false
- checking for realpath... /usr/bin/realpath
- checking for pkg-config... /usr/bin/pkg-config
- checking for gcc... gcc
- checking whether the C compiler works... yes
- checking for C compiler default output file name... a.out
- checking for suffix of executables...
- checking whether we are cross compiling... no
- checking for suffix of object files... o
- checking whether we are using the GNU C compiler... yes
- checking whether gcc accepts -g... yes
- checking for gcc option to accept ISO C89... none needed
- checking how to run the C preprocessor... gcc -E
- checking for grep that handles long lines and -e... /bin/grep
- checking for egrep... /bin/grep -E
- checking whether gcc needs -traditional... no
- checking for ANSI C header files... yes
- checking for sys/types.h... yes
- checking for sys/stat.h... yes
- checking for stdlib.h... yes
- checking for string.h... yes
- checking for memory.h... yes
- checking for strings.h... yes
- checking for inttypes.h... yes
- checking for stdint.h... yes
- checking for unistd.h... yes
- checking minix/config.h usability... no
- checking minix/config.h presence... no
- checking for minix/config.h... no
- checking whether it is safe to define __EXTENSIONS__... yes
- checking how to run the C preprocessor... gcc -E
- checking for f95... f95
- checking whether we are using the GNU Fortran 77 compiler... yes
- checking whether f95 accepts -g... yes
- checking for g++... g++
- checking whether we are using the GNU C++ compiler... yes
- checking whether g++ accepts -g... yes
- checking whether g++ -ggdb -pipe -Wall -pedantic can compile C++ code... yes
- checking how to run the C++ preprocessor... g++ -E
- checking whether __attribute__((visibility())) is supported... yes
- checking whether gcc accepts -fvisibility... yes
- checking whether f95 accepts -fvisibility... yes
- checking for gcc... gcc
- checking whether we are using the GNU Objective C compiler... yes
- checking whether gcc accepts -g... yes
- checking for Objective C++ compiler... trying some possibilities
- checking whether g++ can compile ObjC++... yes
- g++
- checking how to print strings... printf
- checking for a sed that does not truncate output... (cached) /bin/sed
- checking for fgrep... /bin/grep -F
- checking for ld used by gcc... /usr/bin/ld
- checking if the linker (/usr/bin/ld) is GNU ld... yes
- checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
- checking the name lister (/usr/bin/nm -B) interface... BSD nm
- checking the maximum length of command line arguments... 1572864
- checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop
- checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop
- checking for /usr/bin/ld option to reload object files... -r
- checking for objdump... objdump
- checking how to recognize dependent libraries... pass_all
- checking for dlltool... no
- checking how to associate runtime and link libraries... printf %s\n
- checking for archiver @FILE support... @
- checking for strip... strip
- checking for ranlib... ranlib
- checking for gawk... /usr/bin/awk
- checking command to parse /usr/bin/nm -B output from gcc object... ok
- checking for sysroot... no
- checking for a working dd... /bin/dd
- checking how to truncate binary pipes... /bin/dd bs=4096 count=1
- checking for mt... mt
- checking if mt is a manifest tool... no
- checking for dlfcn.h... yes
- checking for objdir... .libs
- checking if gcc supports -fno-rtti -fno-exceptions... no
- checking for gcc option to produce PIC... -fPIC -DPIC
- checking if gcc PIC flag -fPIC -DPIC works... yes
- checking if gcc static flag -static works... yes
- checking if gcc supports -c -o file.o... yes
- checking if gcc supports -c -o file.o... (cached) yes
- checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
- checking whether -lc should be explicitly linked in... no
- checking dynamic linker characteristics... GNU/Linux ld.so
- checking how to hardcode library paths into programs... immediate
- checking whether stripping libraries is possible... yes
- checking if libtool supports shared libraries... yes
- checking whether to build shared libraries... yes
- checking whether to build static libraries... no
- checking how to run the C++ preprocessor... g++ -E
- checking for ld used by g++... /usr/bin/ld -m elf_x86_64
- checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
- checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
- checking for g++ option to produce PIC... -fPIC -DPIC
- checking if g++ PIC flag -fPIC -DPIC works... yes
- checking if g++ static flag -static works... yes
- checking if g++ supports -c -o file.o... yes
- checking if g++ supports -c -o file.o... (cached) yes
- checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
- checking dynamic linker characteristics... (cached) GNU/Linux ld.so
- checking how to hardcode library paths into programs... immediate
- checking if libtool supports shared libraries... yes
- checking whether to build shared libraries... yes
- checking whether to build static libraries... no
- checking for f95 option to produce PIC... -fPIC
- checking if f95 PIC flag -fPIC works... yes
- checking if f95 static flag -static works... yes
- checking if f95 supports -c -o file.o... yes
- checking if f95 supports -c -o file.o... (cached) yes
- checking whether the f95 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
- checking dynamic linker characteristics... (cached) GNU/Linux ld.so
- checking how to hardcode library paths into programs... immediate
- checking for cos in -lm... yes
- checking for sin in -lm... yes
- checking for dlopen in -ldl... yes
- checking readline/history.h usability... yes
- checking readline/history.h presence... yes
- checking for readline/history.h... yes
- checking readline/readline.h usability... yes
- checking readline/readline.h presence... yes
- checking for readline/readline.h... yes
- checking for rl_callback_read_char in -lreadline... yes
- checking for history_truncate_file... yes
- checking whether rl_callback_sigcleanup exists and is declared... yes
- checking whether rl_completion_matches exists and is declared... yes
- checking whether rl_resize_terminal exists and is declared... yes
- checking whether rl_sort_completion_matches exists and is declared... yes
- checking for ANSI C header files... (cached) yes
- checking for dirent.h that defines DIR... yes
- checking for library containing opendir... none required
- checking for sys/wait.h that is POSIX.1 compatible... yes
- checking for dlfcn.h... (cached) yes
- checking fcntl.h usability... yes
- checking fcntl.h presence... yes
- checking for fcntl.h... yes
- checking glob.h usability... yes
- checking glob.h presence... yes
- checking for glob.h... yes
- checking grp.h usability... yes
- checking grp.h presence... yes
- checking for grp.h... yes
- checking pwd.h usability... yes
- checking pwd.h presence... yes
- checking for pwd.h... yes
- checking sched.h usability... yes
- checking sched.h presence... yes
- checking for sched.h... yes
- checking for strings.h... (cached) yes
- checking sys/resource.h usability... yes
- checking sys/resource.h presence... yes
- checking for sys/resource.h... yes
- checking sys/select.h usability... yes
- checking sys/select.h presence... yes
- checking for sys/select.h... yes
- checking sys/socket.h usability... yes
- checking sys/socket.h presence... yes
- checking for sys/socket.h... yes
- checking for sys/stat.h... (cached) yes
- checking sys/time.h usability... yes
- checking sys/time.h presence... yes
- checking for sys/time.h... yes
- checking sys/times.h usability... yes
- checking sys/times.h presence... yes
- checking for sys/times.h... yes
- checking sys/utsname.h usability... yes
- checking sys/utsname.h presence... yes
- checking for sys/utsname.h... yes
- checking for unistd.h... (cached) yes
- checking utime.h usability... yes
- checking utime.h presence... yes
- checking for utime.h... yes
- checking arpa/inet.h usability... yes
- checking arpa/inet.h presence... yes
- checking for arpa/inet.h... yes
- checking dl.h usability... no
- checking dl.h presence... no
- checking for dl.h... no
- checking elf.h usability... yes
- checking elf.h presence... yes
- checking for elf.h... yes
- checking features.h usability... yes
- checking features.h presence... yes
- checking for features.h... yes
- checking floatingpoint.h usability... no
- checking floatingpoint.h presence... no
- checking for floatingpoint.h... no
- checking langinfo.h usability... yes
- checking langinfo.h presence... yes
- checking for langinfo.h... yes
- checking netdb.h usability... yes
- checking netdb.h presence... yes
- checking for netdb.h... yes
- checking netinet/in.h usability... yes
- checking netinet/in.h presence... yes
- checking for netinet/in.h... yes
- checking sys/param.h usability... yes
- checking sys/param.h presence... yes
- checking for sys/param.h... yes
- checking stdalign.h usability... yes
- checking stdalign.h presence... yes
- checking for stdalign.h... yes
- checking errno.h usability... yes
- checking errno.h presence... yes
- checking for errno.h... yes
- checking for inttypes.h... (cached) yes
- checking limits.h usability... yes
- checking limits.h presence... yes
- checking for limits.h... yes
- checking locale.h usability... yes
- checking locale.h presence... yes
- checking for locale.h... yes
- checking stdarg.h usability... yes
- checking stdarg.h presence... yes
- checking for stdarg.h... yes
- checking stdbool.h usability... yes
- checking stdbool.h presence... yes
- checking for stdbool.h... yes
- checking for stdint.h... (cached) yes
- checking for string.h... (cached) yes
- checking whether setjmp.h is POSIX.1 compatible... yes
- checking whether sigsetjmp is declared... yes
- checking whether siglongjmp is declared... yes
- checking for GNU C library with version >= 2... yes
- checking return type of signal handlers... void
- checking for uint64_t... yes
- checking for int64_t... yes
- checking for int_fast64_t... yes
- checking for pid_t... yes
- checking for size_t... yes
- checking whether SIZE_MAX is declared... yes
- checking for blkcnt_t... yes
- checking for type of socket length... socklen_t *
- checking for stack_t... yes
- checking for intptr_t... yes
- checking for uintptr_t... yes
- checking whether byte ordering is bigendian... no
- checking for an ANSI C-conforming const... yes
- checking for gcc option to accept ISO C99... none needed
- checking for gcc option to accept ISO Standard C... (cached) none needed
- checking for inline... inline
- checking size of int... 4
- checking size of long... 8
- checking size of long long... 8
- checking size of double... 8
- checking size of size_t... 8
- checking size of long double... 16
- checking whether we can compute C Make dependencies... yes, using $(CC) -MM
- checking whether gcc supports -c -o FILE.lo... yes
- checking for gcc option to support OpenMP... -fopenmp
- checking how to get verbose linking output from f95... -v
- checking for Fortran 77 libraries of f95... -L/usr/local/lib -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath
- checking how to get verbose linking output from gcc... -v
- checking for C libraries of gcc... -L/usr/local/lib -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgcc_s
- checking for dummy main to link with Fortran 77 libraries... none
- checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
- checking whether f95 appends underscores to external names... yes
- checking whether f95 appends extra underscores to external names... no
- checking whether mixed C/Fortran code can be run... yes
- checking whether f95 and gcc agree on int and double... yes
- checking whether f95 and gcc agree on double complex... yes
- checking for f95 option to support OpenMP... -fopenmp
- checking whether g++ accepts -M for generating dependencies... yes
- checking for g++ option to support OpenMP... -fopenmp
- checking whether we can compute ObjC Make dependencies... yes, using gcc -MM
- checking for ObjC runtime library... -lobjc
- checking for ObjC runtime style... unknown
- checking whether gcc accepts -fobjc-exceptions... yes
- checking whether C runtime needs -D__NO_MATH_INLINES... no
- checking for xmkmf... no
- checking whether g++ supports C++98 features by default... no
- checking whether g++ supports C++98 features with -std=gnu++98... yes
- checking whether g++ supports C++11 features by default... no
- checking whether g++ supports C++11 features with -std=gnu++11... yes
- checking whether g++ supports C++14 features by default... yes
- checking whether g++ supports C++17 features by default... no
- checking whether g++ supports C++17 features with -std=gnu++17... no
- checking whether g++ supports C++17 features with -std=gnu++1z... no
- checking whether g++ supports C++17 features with -std=c++17... no
- checking whether g++ supports C++17 features with -std=c++1z... no
- configure: No compiler with C++17 support was found
- checking for off_t... yes
- checking for working alloca.h... yes
- checking for alloca... yes
- checking whether alloca is declared... yes
- checking whether expm1 exists and is declared... yes
- checking whether hypot exists and is declared... yes
- checking whether log1p exists and is declared... yes
- checking whether log1pl exists and is declared... yes
- checking whether log2 exists and is declared... yes
- checking whether log10 exists and is declared... yes
- checking whether nearbyint exists and is declared... yes
- checking whether nearbyintl exists and is declared... yes
- checking whether powl exists and is declared... yes
- checking whether rint exists and is declared... yes
- checking whether rintl exists and is declared... yes
- checking whether va_copy exists and is declared... yes
- checking for isblank... yes
- checking sunmath.h usability... no
- checking sunmath.h presence... no
- checking for sunmath.h... no
- checking for cospi in -lsunmath... no
- checking for atanpi... no
- checking for atan2pi... no
- checking for cospi... no
- checking for exp10... yes
- checking for pown... no
- checking for sinpi... no
- checking for tanpi... no
- checking for __cospi... no
- checking for __sinpi... no
- checking for __tanpi... no
- checking for fseeko... yes
- checking for ftello... yes
- checking for matherr... yes
- checking whether fcntl exists and is declared... yes
- checking whether getgrgid exists and is declared... yes
- checking whether getpwuid exists and is declared... yes
- checking whether kill exists and is declared... yes
- checking whether sigaction exists and is declared... yes
- checking whether sigaltstack exists and is declared... yes
- checking whether sigemptyset exists and is declared... yes
- checking whether fdopen exists and is declared... yes
- checking whether popen exists and is declared... yes
- checking whether getline exists and is declared... yes
- checking whether select exists and is declared... yes
- checking whether setenv exists and is declared... yes
- checking whether unsetenv exists and is declared... yes
- checking whether getrlimit exists and is declared... yes
- checking whether setrlimit exists and is declared... yes
- checking whether getrusage exists and is declared... yes
- checking whether getpriority exists and is declared... yes
- checking whether chmod exists and is declared... yes
- checking whether mkfifo exists and is declared... yes
- checking whether stat exists and is declared... yes
- checking whether umask exists and is declared... yes
- checking whether gettimeofday exists and is declared... yes
- checking whether utimes exists and is declared... yes
- checking whether times exists and is declared... yes
- checking whether gmtime_r exists and is declared... yes
- checking whether localtime_r exists and is declared... yes
- checking whether nl_langinfo exists and is declared... yes
- checking whether access exists and is declared... yes
- checking whether chdir exists and is declared... yes
- checking whether execv exists and is declared... yes
- checking whether ftruncate exists and is declared... yes
- checking whether getcwd exists and is declared... yes
- checking whether geteuid exists and is declared... yes
- checking whether getuid exists and is declared... yes
- checking whether link exists and is declared... yes
- checking whether readlink exists and is declared... yes
- checking whether symlink exists and is declared... yes
- checking whether sysconf exists and is declared... yes
- checking whether sched_setaffinity exists and is declared... yes
- checking whether sched_getaffinity exists and is declared... yes
- checking whether utime exists and is declared... yes
- checking whether utimensat exists and is declared... yes
- checking for clock_gettime in -lrt... yes
- checking whether clock_gettime exists and is declared... yes
- checking whether timespec_get exists and is declared... yes
- checking for putenv... yes
- checking whether putenv is declared... yes
- checking for vasprintf... yes
- checking whether vasprintf is declared... yes
- checking for mempcpy... yes
- checking for realpath... yes
- checking whether realpath is declared... yes
- checking whether glob exists and is declared... yes
- checking for dladdr... yes
- checking for dlsym... yes
- checking whether dladdr is declared... yes
- checking whether dlsym is declared... yes
- checking whether RTLD_DEFAULT is declared... yes
- checking whether RTLD_NEXT is declared... yes
- checking thread.h usability... no
- checking thread.h presence... no
- checking for thread.h... no
- checking whether thr_stksegment exists and is declared... no
- checking for isnan... yes
- checking whether isfinite is declared... yes
- checking whether isnan is declared... yes
- checking whether you have IEEE 754 floating-point arithmetic... yes
- checking whether putenv("FOO") can unset an environment variable... yes
- checking whether putenv("FOO=") can unset an environment variable... no
- checking for nl_langinfo and CODESET... yes
- checking for mkdtemp... yes
- checking for strdup... yes
- checking for strncasecmp... yes
- checking whether mkdtemp is declared... yes
- checking whether strdup is declared... yes
- checking whether strncasecmp is declared... yes
- checking for library containing connect... none required
- checking for library containing gethostbyname... none required
- checking for library containing xdr_string... none required
- checking for working calloc... yes
- checking for working isfinite... yes
- checking for working log1p... yes
- checking whether ftell works correctly on files opened for append... yes
- checking for working sigaction... yes
- checking whether mktime sets errno... no
- checking whether mktime works correctly outside 1902-2037... yes
- checking complex.h usability... yes
- checking complex.h presence... yes
- checking for complex.h... yes
- checking for double complex... yes
- checking whether C99 double complex is supported... yes
- checking whether cabs exists and is declared... yes
- checking whether carg exists and is declared... yes
- checking whether cexp exists and is declared... yes
- checking whether clog exists and is declared... yes
- checking whether csqrt exists and is declared... yes
- checking whether cpow exists and is declared... yes
- checking whether ccos exists and is declared... yes
- checking whether csin exists and is declared... yes
- checking whether ctan exists and is declared... yes
- checking whether cacos exists and is declared... yes
- checking whether casin exists and is declared... yes
- checking whether catan exists and is declared... yes
- checking whether ccosh exists and is declared... yes
- checking whether csinh exists and is declared... yes
- checking whether ctanh exists and is declared... yes
- checking for working ctanh... yes
- checking whether 'struct tm' includes tm_zone... yes
- checking whether 'struct tm' includes tm_gmtoff... yes
- checking iconv.h usability... yes
- checking iconv.h presence... yes
- checking for iconv.h... yes
- checking for iconv... yes
- checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
- checking for iconvlist... no
- checking for iconv... yes
- checking for iconv declaration...
- extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
- checking wchar.h usability... yes
- checking wchar.h presence... yes
- checking for wchar.h... yes
- checking wctype.h usability... yes
- checking wctype.h presence... yes
- checking for wctype.h... yes
- checking whether mbrtowc exists and is declared... yes
- checking whether wcrtomb exists and is declared... yes
- checking whether wcscoll exists and is declared... yes
- checking whether wcsftime exists and is declared... yes
- checking whether wcstod exists and is declared... yes
- checking whether mbstowcs exists and is declared... yes
- checking whether wcstombs exists and is declared... yes
- checking whether wctrans exists and is declared... yes
- checking whether iswblank exists and is declared... yes
- checking whether wctype exists and is declared... yes
- checking whether iswctype exists and is declared... yes
- checking for wctrans_t... yes
- checking for mbstate_t... yes
- checking for ICU... yes
- checking for X... libraries , headers
- checking for gethostbyname... yes
- checking for connect... yes
- checking for remove... yes
- checking for shmat... yes
- checking for IceConnectionNumber in -lICE... yes
- checking X11/Intrinsic.h usability... yes
- checking X11/Intrinsic.h presence... yes
- checking for X11/Intrinsic.h... yes
- checking for XtToolkitInitialize in -lXt... yes
- using X11 ... yes
- checking for KeySym... yes
- checking X11/Xmu/Atoms.h usability... yes
- checking X11/Xmu/Atoms.h presence... yes
- checking for X11/Xmu/Atoms.h... yes
- checking for XmuInternAtom in -lXmu... yes
- checking whether pkg-config knows about cairo and pango... no
- checking whether pkg-config knows about cairo... yes
- checking whether cairo is >= 1.2 and works... yes
- checking for tclConfig.sh... no
- checking for tclConfig.sh in library (sub)directories... no
- checking for tkConfig.sh... no
- checking for tkConfig.sh in library (sub)directories... no
- checking for tcl.h... no
- checking for BSD networking... yes
- checking rpc/types.h usability... yes
- checking rpc/types.h presence... yes
- checking for rpc/types.h... yes
- checking for rpc/xdr.h... yes
- checking for XDR support... yes
- checking for inflateInit2_ in -lz... yes
- checking zlib.h usability... yes
- checking zlib.h presence... yes
- checking for zlib.h... yes
- checking if zlib version >= 1.2.5... yes
- checking whether zlib support suffices... yes
- checking mmap support for zlib... yes
- checking for BZ2_bzlibVersion in -lbz2... yes
- checking bzlib.h usability... yes
- checking bzlib.h presence... yes
- checking for bzlib.h... yes
- checking if bzip2 version >= 1.0.6... yes
- checking whether bzip2 support suffices... yes
- checking for lzma_version_number in -llzma... yes
- checking lzma.h usability... yes
- checking lzma.h presence... yes
- checking for lzma.h... yes
- checking if lzma version >= 5.0.3... yes
- checking for pcre_fullinfo in -lpcre... yes
- checking pcre.h usability... yes
- checking pcre.h presence... yes
- checking for pcre.h... yes
- checking pcre/pcre.h usability... no
- checking pcre/pcre.h presence... no
- checking for pcre/pcre.h... no
- checking if PCRE version >= 8.20, < 10.0 and has UTF-8 support... yes
- checking if PCRE version >= 8.32... yes
- checking whether PCRE support suffices... yes
- checking for pcre2-config... no
- checking for curl-config... /home/mazytnicki/Desktop/Apps/Miniconda2/bin/curl-config
- checking libcurl version ... 7.54.1
- checking curl/curl.h usability... yes
- checking curl/curl.h presence... yes
- checking for curl/curl.h... yes
- checking if libcurl is version 7 and >= 7.22.0... yes
- checking if libcurl supports https... yes
- checking if jpeglib version >= 6b... no
- checking if libpng version >= 1.2.7... yes
- checking for png_create_write_struct in -lpng... yes
- checking whether leap seconds are treated according to POSIX... yes
- checking for inline... inline
- checking for sys/time.h... (cached) yes
- checking for stdlib.h... (cached) yes
- checking for unistd.h... (cached) yes
- checking for sys/param.h... (cached) yes
- checking for struct stat.st_atim.tv_nsec... yes
- checking whether struct stat.st_atim is of type struct timespec... yes
- checking for setitimer... yes
- checking for special C compiler options needed for large files... no
- checking for _FILE_OFFSET_BITS value needed for large files... no
- checking for _LARGEFILE_SOURCE value needed for large files... no
- checking whether KERN_USRSTACK sysctl is supported... no
- checking for visible __lib_stack_end... yes
- checking for paperconf... /usr/bin/paperconf
- checking for gfortran... gfortran
- checking whether we are using the GNU Fortran compiler... yes
- checking whether gfortran accepts -g... yes
- checking if libtool supports shared libraries... yes
- checking whether to build shared libraries... yes
- checking whether to build static libraries... no
- checking for gfortran option to produce PIC... -fPIC
- checking if gfortran PIC flag -fPIC works... yes
- checking if gfortran static flag -static works... yes
- checking if gfortran supports -c -o file.o... yes
- checking if gfortran supports -c -o file.o... (cached) yes
- checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
- checking dynamic linker characteristics... (cached) GNU/Linux ld.so
- checking how to hardcode library paths into programs... immediate
- checking for Fortran flag to compile .f90 files... none
- checking for Fortran flag to compile .f95 files... none
- checking for gfortran option to support OpenMP... -fopenmp
- checking whether NLS is requested... yes
- Configuring src/extra/intl directory
- checking for a thread-safe mkdir -p... /bin/mkdir -p
- checking whether we are using the GNU C Library 2 or newer... yes
- checking for ranlib... (cached) ranlib
- checking for simple visibility declarations... yes
- checking for stdint.h... yes
- checking for getpagesize... yes
- checking for working mmap... yes
- checking whether integer division by zero raises SIGFPE... yes
- checking for inttypes.h... yes
- checking for unsigned long long int... yes
- checking for inttypes.h... (cached) yes
- checking whether the inttypes.h PRIxNN macros are broken... no
- checking for ld used by gcc... /usr/bin/ld -m elf_x86_64
- checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
- checking for shared library run path origin... done
- checking whether imported symbols can be declared weak... yes
- checking for multithread API to use... none
- checking argz.h usability... yes
- checking argz.h presence... yes
- checking for argz.h... yes
- checking for inttypes.h... (cached) yes
- checking for limits.h... (cached) yes
- checking for unistd.h... (cached) yes
- checking for sys/param.h... (cached) yes
- checking for getcwd... yes
- checking for getegid... yes
- checking for geteuid... yes
- checking for getgid... yes
- checking for getuid... yes
- checking for mempcpy... (cached) yes
- checking for munmap... yes
- checking for stpcpy... yes
- checking for strcasecmp... yes
- checking for strdup... (cached) yes
- checking for strtoul... yes
- checking for tsearch... yes
- checking for argz_count... yes
- checking for argz_stringify... yes
- checking for argz_next... yes
- checking for __fsetlocking... yes
- checking whether feof_unlocked is declared... yes
- checking whether fgets_unlocked is declared... yes
- checking for iconv... (cached) yes
- checking for iconv declaration... (cached)
- extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
- checking for NL_LOCALE_NAME macro... yes
- checking for bison... bison
- checking version of bison... 3.0.4, ok
- checking for long long int... yes
- checking for long double... yes
- checking for wchar_t... yes
- checking for wint_t... yes
- checking for intmax_t... yes
- checking whether printf() supports POSIX/XSI format strings... yes
- checking whether we are using the GNU C Library 2.1 or newer... yes
- checking for stdint.h... (cached) yes
- checking for SIZE_MAX... yes
- checking for stdint.h... (cached) yes
- checking for CFPreferencesCopyAppValue... no
- checking for CFLocaleCopyCurrent... no
- checking for ptrdiff_t... yes
- checking stddef.h usability... yes
- checking stddef.h presence... yes
- checking for stddef.h... yes
- checking for stdlib.h... (cached) yes
- checking for string.h... (cached) yes
- checking for asprintf... yes
- checking for fwprintf... yes
- checking for putenv... (cached) yes
- checking for setenv... yes
- checking for setlocale... yes
- checking for snprintf... yes
- checking for wcslen... yes
- checking whether _snprintf is declared... no
- checking whether _snwprintf is declared... no
- checking whether getc_unlocked is declared... yes
- checking for nl_langinfo and CODESET... (cached) yes
- checking for LC_MESSAGES... yes
- checking for CFPreferencesCopyAppValue... (cached) no
- checking for CFLocaleCopyCurrent... (cached) no
- checking whether included gettext is requested... no
- checking for GNU gettext in libc... yes
- checking whether to use NLS... yes
- checking where the gettext function comes from... libc
- Finished configuring src/extra/intl directory
- checking whether OpenMP SIMD reduction is supported... yes
- using as R_SHELL for scripts ... /bin/bash
- configure: creating ./config.status
- config.status: creating Makeconf
- config.status: creating Makefile
- config.status: creating doc/Makefile
- config.status: creating doc/html/Makefile
- config.status: creating doc/manual/Makefile
- config.status: creating etc/Makefile
- config.status: creating etc/Makeconf
- config.status: creating etc/Renviron
- config.status: creating etc/javaconf
- config.status: creating etc/ldpaths
- config.status: creating m4/Makefile
- config.status: creating po/Makefile
- config.status: creating share/Makefile
- config.status: creating src/Makefile
- config.status: creating src/appl/Makefile
- config.status: creating src/extra/Makefile
- config.status: creating src/extra/blas/Makefile
- config.status: creating src/extra/intl/Makefile
- config.status: creating src/extra/tre/Makefile
- config.status: creating src/extra/tzone/Makefile
- config.status: creating src/extra/xdr/Makefile
- config.status: creating src/include/Makefile
- config.status: creating src/include/Rmath.h0
- config.status: creating src/include/R_ext/Makefile
- config.status: creating src/library/Recommended/Makefile
- config.status: creating src/library/Makefile
- config.status: creating src/library/base/DESCRIPTION
- config.status: creating src/library/base/Makefile
- config.status: creating src/library/compiler/DESCRIPTION
- config.status: creating src/library/compiler/Makefile
- config.status: creating src/library/datasets/DESCRIPTION
- config.status: creating src/library/datasets/Makefile
- config.status: creating src/library/graphics/DESCRIPTION
- config.status: creating src/library/graphics/Makefile
- config.status: creating src/library/graphics/src/Makefile
- config.status: creating src/library/grDevices/DESCRIPTION
- config.status: creating src/library/grDevices/Makefile
- config.status: creating src/library/grDevices/src/Makefile
- config.status: creating src/library/grDevices/src/cairo/Makefile
- config.status: creating src/library/grid/DESCRIPTION
- config.status: creating src/library/grid/Makefile
- config.status: creating src/library/grid/src/Makefile
- config.status: creating src/library/methods/DESCRIPTION
- config.status: creating src/library/methods/Makefile
- config.status: creating src/library/methods/src/Makefile
- config.status: creating src/library/parallel/DESCRIPTION
- config.status: creating src/library/parallel/Makefile
- config.status: creating src/library/parallel/src/Makefile
- config.status: creating src/library/profile/Makefile
- config.status: creating src/library/stats/DESCRIPTION
- config.status: creating src/library/stats/Makefile
- config.status: creating src/library/stats/src/Makefile
- config.status: creating src/library/stats4/DESCRIPTION
- config.status: creating src/library/stats4/Makefile
- config.status: creating src/library/splines/DESCRIPTION
- config.status: creating src/library/splines/Makefile
- config.status: creating src/library/splines/src/Makefile
- config.status: creating src/library/tcltk/DESCRIPTION
- config.status: creating src/library/tcltk/Makefile
- config.status: creating src/library/tcltk/src/Makefile
- config.status: creating src/library/tools/DESCRIPTION
- config.status: creating src/library/tools/Makefile
- config.status: creating src/library/tools/src/Makefile
- config.status: creating src/library/translations/DESCRIPTION
- config.status: creating src/library/translations/Makefile
- config.status: creating src/library/utils/DESCRIPTION
- config.status: creating src/library/utils/Makefile
- config.status: creating src/library/utils/src/Makefile
- config.status: creating src/main/Makefile
- config.status: creating src/modules/Makefile
- config.status: creating src/modules/X11/Makefile
- config.status: creating src/modules/internet/Makefile
- config.status: creating src/modules/lapack/Makefile
- config.status: creating src/nmath/Makefile
- config.status: creating src/nmath/standalone/Makefile
- config.status: creating src/scripts/Makefile
- config.status: creating src/scripts/R.sh
- config.status: creating src/scripts/Rcmd
- config.status: creating src/scripts/f77_f2c
- config.status: creating src/scripts/javareconf
- config.status: creating src/scripts/mkinstalldirs
- config.status: creating src/scripts/pager
- config.status: creating src/scripts/rtags
- config.status: creating src/unix/Makefile
- config.status: creating tests/Makefile
- config.status: creating tests/Embedding/Makefile
- config.status: creating tests/Examples/Makefile
- config.status: creating tools/Makefile
- config.status: creating src/include/config.h
- config.status: src/include/config.h is unchanged
- config.status: executing libtool commands
- config.status: executing stamp-h commands
- R is now configured for x86_64-pc-linux-gnu
- Source directory: .
- Installation directory: /usr/local/lib/R-devel
- C compiler: gcc -ggdb -pipe -std=gnu99 -Wall -pedantic
- Fortran 77 compiler: f95 -g -O2
- Default C++ compiler: g++ -ggdb -pipe -Wall -pedantic
- C++98 compiler: g++ -std=gnu++98 -ggdb -pipe -Wall -pedantic
- C++11 compiler: g++ -std=gnu++11 -ggdb -pipe -Wall -pedantic
- C++14 compiler: g++ -ggdb -pipe -Wall -pedantic
- C++17 compiler:
- Fortran 90/95 compiler: gfortran -g -O2
- Obj-C compiler: gcc -g -O2 -fobjc-exceptions
- Interfaces supported: X11
- External libraries: readline, curl
- Additional capabilities: PNG, NLS, cairo, ICU
- Options enabled: shared R library, shared BLAS, R profiling
- Capabilities skipped: JPEG, TIFF
- Options not enabled: memory profiling
- Recommended packages: no
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