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hippopotamusinflight

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hippopotamusinflight
Sep 10th, 2020 (edited)
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  1. Event1,Event2,obs_cooccur,exp_cooccur,qval_final,logfoldchange,label
  2. EGFR L858R,mut_Negative,0,209.7,0,-24.3218235944441,exclusion
  3. 16p gain,16p loss,0,183.9,0,-24.1324182224114,exclusion
  4. 13q gain,13q loss,0,154.9,0,-23.8848339014762,exclusion
  5. 4q gain,4q loss,0,151.5,0,-23.8528145531372,exclusion
  6. 3q gain,3q loss,0,147.3,0,-23.8122541925279,exclusion
  7. 5q gain,5q loss,0,136.7,0,-23.7045100126928,exclusion
  8. 14q gain,14q loss,0,126.1,0,-23.5880650542865,exclusion
  9. 12q gain,12q loss,0,122.1,0,-23.5415599826937,exclusion
  10. 6q gain,6q loss,0,120.7,0,-23.5249224598318,exclusion
  11. 7q gain,7q loss,0,119.2,0,-23.5068810210431,exclusion
  12. 9p gain,9p loss,0,114.2,0,-23.4450594412429,exclusion
  13. 16q gain,16q loss,0,112.8,0,-23.4272638598467,exclusion
  14. 22q gain,22q loss,0,110.3,0,-23.3949295859382,exclusion
  15. 1p gain,1p loss,0,106.9,0,-23.3497586522274,exclusion
  16. 11q gain,11q loss,0,106.6,0,-23.3457042376459,exclusion
  17. 17q gain,17q loss,0,105.5,0,-23.3307397998923,exclusion
  18. KRAS,mut_Negative,0,105.3,0,-23.3280022375832,exclusion
  19. 11p gain,11p loss,0,105,0,-23.3238861295025,exclusion
  20. 8q gain,8q loss,0,101.6,0,-23.2763972083192,exclusion
  21. 19q gain,19q loss,0,101,0,-23.2678521000297,exclusion
  22. 2q gain,2q loss,0,101,0,-23.2678521000297,exclusion
  23. 20q gain,20q loss,0,98.3,0,-23.2287601326545,exclusion
  24. 6p gain,6p loss,0,95.9,0,-23.193099535005,exclusion
  25. 3p gain,3p loss,0,95,0,-23.1794962346304,exclusion
  26. 19p gain,19p loss,0,93.5,0,-23.1565350886234,exclusion
  27. 9q gain,9q loss,0,87.3,0,-23.057550388436,exclusion
  28. 15q gain,15q loss,0,84.5,0,-23.0105200814521,exclusion
  29. 18q gain,18q loss,0,76.2,0,-22.8613597563728,exclusion
  30. 10q gain,10q loss,0,73.1,0,-22.801440172861,exclusion
  31. 17p gain,17p loss,0,73.1,0,-22.801440172861,exclusion
  32. 5p gain,5p loss,0,62.9,0,-22.584628815792,exclusion
  33. PIK3CA,mut_Negative,0,61.8,0,-22.5591756408996,exclusion
  34. 2p gain,2p loss,0,58,0,-22.4676217183049,exclusion
  35. 4p gain,4p loss,0,55.7,0,-22.4092461559011,exclusion
  36. ERBB2,mut_Negative,0,49.5,0,-22.2389973859699,exclusion
  37. 1q gain,1q loss,0,47.6,0,-22.1825304459446,exclusion
  38. 8p gain,8p loss,0,46.9,0,-22.1611567996757,exclusion
  39. 7p gain,7p loss,0,46.6,0,-22.1518988337949,exclusion
  40. BRAF,mut_Negative,0,34.3,0,-21.709777566333,exclusion
  41. MET,mut_Negative,0,18.3,0,-20.8034130061912,exclusion
  42. ALK,ERBB2,0,10.6,0.000301545454545455,-20.0156341951451,exclusion
  43. 21q gain,21q loss,0,8.6,0.00280669230769231,-19.7139788118029,exclusion
  44. EGFR L858R,RET,0,7.8,0.00329167938931298,-19.5731164480195,exclusion
  45. BRAF,1q loss,0,3.9,0.217101390977444,-18.573118297625,neutral
  46. KRAS,RET,0,3.9,0.195860952380952,-18.573118297625,neutral
  47. PIK3CA,RET,0,2.3,0.750833142144638,-17.81128060818,neutral
  48. RET,18q gain,0,2.1,0.843555545023697,-17.6800366722882,neutral
  49. RET,15q gain,0,2,0.977285101123596,-17.609647687894,neutral
  50. ERBB2,RET,0,1.8,1,-17.4576453959419,neutral
  51. BRAF,RET,0,1.3,1,-16.988163195302,neutral
  52. RET,21q loss,0,1.1,1,-16.7471571135366,neutral
  53. EGFR 19del,EGFR L858R,23,238.4,0,-3.37367790277494,exclusion
  54. EGFR L858R,7p loss,2,18.3,0,-3.19376531829724,exclusion
  55. EGFR L858R,KRAS,14,99.9,0,-2.83505696476527,exclusion
  56. 19p gain,1q loss,1,5.8,0.214851136363636,-2.53604096076503,neutral
  57. 7p loss,9q gain,1,5.6,0.252769927007299,-2.48541497653081,neutral
  58. 17p gain,19p gain,59,11.4,0,2.37168010908761,co-occur
  59. 19p gain,19q gain,88,17.1,0,2.36350651890031,co-occur
  60. ROS1,19p gain,1,4.9,0.409096666666667,-2.29277026662216,neutral
  61. KRAS,8q loss,5,23.7,0,-2.24488478246829,exclusion
  62. RET,11q loss,1,4.6,0.457316018518519,-2.20162257058153,neutral
  63. 19p gain,9q gain,65,14.7,0,2.14462280360765,co-occur
  64. 1p loss,1q loss,71,16.3,0,2.12294637826873,co-occur
  65. 7p loss,7q loss,32,7.4,0,2.11247323051397,co-occur
  66. MET,15q gain,1,4.3,0.569662679558011,-2.10432558803731,neutral
  67. ERBB2,MET,1,4.1,0.674427493403694,-2.03561300161655,neutral
  68. ALK,EGFR L858R,11,44.8,0,-2.0259942190227,exclusion
  69. EGFR 19del,mut_Negative,62,251.5,0,-2.02021810408954,exclusion
  70. EGFR 19del,ROS1,6,24.2,0,-2.0119708333312,exclusion
  71. 1q loss,21q loss,14,3.5,2.27347498286498e-05,1.99999690851615,co-occur
  72. RET,13q gain,1,3.9,0.701186443298969,-1.96346339630992,neutral
  73. 19p gain,22q gain,65,16.9,0,1.94341583992125,co-occur
  74. 10q gain,8p gain,25,6.8,0,1.87831989888085,co-occur
  75. 17p gain,19q gain,61,16.7,0,1.86896051259457,co-occur
  76. RET,mut_Negative,29,8.3,0,1.80486841796322,co-occur
  77. 21q loss,5p loss,14,4.1,8.76354029062087e-05,1.77172852405887,co-occur
  78. 17p gain,22q gain,55,16.6,0,1.72824777028013,co-occur
  79. BRAF,ROS1,1,3.3,1,-1.72245596938935,neutral
  80. ALK,mut_Negative,156,47.3,0,1.72163372788117,co-occur
  81. 9p gain,9q gain,79,24.2,0,1.70684519225463,co-occur
  82. BRAF,EGFR L858R,10,32.5,0,-1.70043871935287,exclusion
  83. 17q loss,1q loss,37,11.4,0,1.69849057074769,co-occur
  84. 1p loss,7p loss,40,12.4,0,1.68965907659829,co-occur
  85. 18q gain,8p gain,27,8.4,0,1.68449699111039,co-occur
  86. 1q loss,7p loss,7,2.2,0.0107416273972603,1.66984690160928,co-occur
  87. 20q loss,21q loss,34,10.7,0,1.66792302574607,co-occur
  88. 1p gain,1q loss,6,19,0.00381812949640288,-1.66296336754568,exclusion
  89. 19p gain,19q loss,22,69,0,-1.64909239145677,exclusion
  90. 2p loss,2q loss,321,102.4,0,1.64835748606525,co-occur
  91. EGFR 19del,RET,3,9.4,0.102511809954751,-1.64769498187481,neutral
  92. EGFR 19del,7p loss,7,21.9,0.000865304347826087,-1.64550264042947,exclusion
  93. 16q gain,22q gain,120,39.9,0,1.58857351292046,co-occur
  94. 10q gain,15q gain,33,11,0,1.58496162636106,co-occur
  95. 19q gain,9q gain,64,21.4,0,1.58046065975089,co-occur
  96. ALK,EGFR 19del,18,53.8,0,-1.57960873288883,exclusion
  97. 14q loss,1q loss,34,11.4,0,1.57650008077356,co-occur
  98. 15q gain,17p gain,35,11.8,0,1.56856725204661,co-occur
  99. 16p gain,7p loss,6,17.7,0.0082925,-1.56071336506646,exclusion
  100. 15q gain,8q loss,4,11.8,0.0925427853881279,-1.56071257036378,exclusion
  101. PIK3CA,ROS1,2,5.9,0.536551037463977,-1.56071018626107,neutral
  102. 2p gain,2q gain,168,57.3,0,1.5518540230047,co-occur
  103. MET,8q loss,12,4.1,0.00127884337349398,1.5493362744717,co-occur
  104. 5p loss,5q loss,82,28.2,0,1.53992841145117,co-occur
  105. 18q gain,3p gain,55,19,0,1.53343170307626,co-occur
  106. 17p gain,1q loss,2,5.7,0.619173333333333,-1.51095723686192,neutral
  107. 19q gain,22q gain,70,24.7,0,1.50284350225999,co-occur
  108. 15q gain,9q gain,43,15.2,0,1.50026472251515,co-occur
  109. 15q gain,3p gain,49,17.4,0,1.49369390844653,co-occur
  110. 1q loss,6p loss,38,13.5,0,1.49303932227406,co-occur
  111. 5p loss,5q gain,7,19.7,0.00773966666666667,-1.49276747385229,exclusion
  112. ALK,KRAS,8,22.5,0.00381812949640288,-1.49185193415965,exclusion
  113. 17p gain,17q loss,8,22.5,0.00381812949640288,-1.49185193415965,exclusion
  114. 1q loss,20q loss,25,8.9,0,1.49004980976884,co-occur
  115. 18q gain,6q gain,89,31.8,0,1.48477827899235,co-occur
  116. ROS1,mut_Negative,59,21.3,0,1.46986109122647,co-occur
  117. 1q loss,4p gain,16,5.8,0.000335686274509804,1.46394551404081,co-occur
  118. 16q gain,19p gain,76,27.6,0,1.46133081866556,co-occur
  119. 3p gain,9q gain,58,21.1,0,1.45880946630669,co-occur
  120. 3p gain,3q loss,15,41.2,0,-1.45768122505962,exclusion
  121. 11q loss,8q loss,76,27.7,0,1.4561131112816,co-occur
  122. 18q gain,9p gain,59,21.8,0,1.43638640221028,co-occur
  123. 4q gain,7q loss,22,59.5,0,-1.43538573137006,exclusion
  124. 20q loss,6p loss,113,41.8,0,1.43474770775148,co-occur
  125. 16p loss,7p loss,47,17.4,0,1.43357292853779,co-occur
  126. 13q gain,18q gain,74,27.4,0,1.43334904598362,co-occur
  127. RET,4q loss,3,8.1,0.273476063829787,-1.43295637940454,neutral
  128. RET,22q gain,1,2.7,1,-1.4329503237029,neutral
  129. 17q loss,2p loss,157,58.2,0,1.43167334487638,co-occur
  130. 5p loss,7p loss,7,2.6,0.0255555031446541,1.42883981097891,co-occur
  131. EGFR 19del,KRAS,45,119.8,0,-1.41263080139818,exclusion
  132. 15q gain,2p gain,63,23.7,0,1.41046438975626,co-occur
  133. 21q loss,6p loss,43,16.2,0,1.40834229166305,co-occur
  134. 16q loss,19p gain,18,47.7,0,-1.40599186063057,exclusion
  135. 19p gain,4p gain,31,11.7,0,1.4057589180041,co-occur
  136. 1q loss,5p loss,9,3.4,0.0120847743338771,1.40438761485847,co-occur
  137. 11p loss,11q loss,327,123.7,0,1.40244506289965,co-occur
  138. 10q gain,19p gain,28,10.6,0,1.40136171659749,co-occur
  139. 4q loss,7q loss,220,83.3,0,1.40111501543085,co-occur
  140. BRAF,19p gain,3,7.9,0.410177917981073,-1.39688716978823,neutral
  141. ALK,5q loss,17,44.5,0,-1.38827006527326,exclusion
  142. 18q gain,2q gain,86,33,0,1.38187036591862,co-occur
  143. 11q loss,2p loss,186,71.4,0,1.38130651747243,co-occur
  144. 7q loss,8q loss,50,19.2,0,1.38082132107644,co-occur
  145. 3q loss,5p loss,44,16.9,0,1.38047975146222,co-occur
  146. RET,5q loss,3,7.8,0.341287342192691,-1.37850866388612,neutral
  147. 2p loss,3q loss,187,72.6,0,1.3649966952104,co-occur
  148. 17p gain,9q gain,37,14.4,0,1.36145584712032,co-occur
  149. 3p gain,9p gain,71,27.7,0,1.35793273071089,co-occur
  150. 10q gain,4p gain,27,10.6,0,1.34889431578661,co-occur
  151. 2p gain,3p gain,84,33,0,1.34792303798946,co-occur
  152. 2q loss,7q loss,172,67.7,0,1.34518069679091,co-occur
  153. 11p gain,11q gain,229,90.5,0,1.33935780459971,co-occur
  154. 3q loss,8q loss,71,28.1,0,1.33724858395307,co-occur
  155. 17q loss,20q loss,89,35.3,0,1.33413690598772,co-occur
  156. 11q loss,2q loss,246,97.8,0,1.33075185640568,co-occur
  157. 2q gain,4q gain,223,88.7,0,1.33003760255263,co-occur
  158. RET,16p loss,3,7.5,0.413477610062893,-1.32192520950401,neutral
  159. BRAF,8p gain,2,5,0.884661600928074,-1.32192376681739,neutral
  160. RET,8p gain,3,1.2,0.179282857800276,1.32192088145424,neutral
  161. MET,21q loss,1,2.5,1,-1.32191943877771,neutral
  162. 10q gain,3p gain,38,15.3,0,1.31246720235721,co-occur
  163. 13q gain,6q gain,144,58.2,0,1.30697760572282,co-occur
  164. 15q gain,8p gain,19,7.7,0.000355318210459987,1.30306795332032,co-occur
  165. 1p loss,21q loss,48,19.5,0,1.29955984257692,co-occur
  166. 14q loss,1p loss,158,64.3,0,1.29703378267698,co-occur
  167. 15q gain,22q gain,43,17.5,0,1.29698124887064,co-occur
  168. 11q loss,5p loss,41,16.7,0,1.2957752950192,co-occur
  169. ROS1,14q gain,11,26.9,0.00138208333333333,-1.29010187380937,exclusion
  170. 4q gain,6q gain,208,85.4,0,1.28427545383446,co-occur
  171. 12q loss,17q loss,229,94.1,0,1.28308087994047,co-occur
  172. ALK,BRAF,3,7.3,0.541995920679887,-1.28293113058927,neutral
  173. 1q loss,9q gain,3,7.3,0.547679802259887,-1.28293113058927,neutral
  174. 8p gain,8q loss,3,7.3,0.557589553072626,-1.28293113058927,neutral
  175. 19p gain,8p gain,18,7.4,0.000676102532427424,1.28239858261117,co-occur
  176. 12q gain,17p gain,71,29.2,0,1.28185036463494,co-occur
  177. 2q loss,5p loss,58,23.9,0,1.27904192713672,co-occur
  178. BRAF,16p gain,13,31.5,0.000865304347826087,-1.27683955359219,exclusion
  179. 12q loss,8q loss,113,46.8,0,1.27174215712313,co-occur
  180. 18q gain,4q gain,97,40.2,0,1.27078903574768,co-occur
  181. 1p loss,6p loss,183,76.2,0,1.26398063518383,co-occur
  182. ROS1,16p loss,8,19.2,0.022767573964497,-1.26303335386959,exclusion
  183. 13q gain,1q loss,5,12,0.184633012048193,-1.26303272269196,neutral
  184. ERBB2,ROS1,2,4.8,0.994658713968958,-1.26303019798816,neutral
  185. KRAS,1p gain,33,79.1,0,-1.26121141543547,exclusion
  186. 2q loss,8q loss,95,39.7,0,1.25878829453877,co-occur
  187. ALK,11q loss,11,26.3,0.00545260273972603,-1.25755851278044,exclusion
  188. 21q loss,2p loss,42,17.6,0,1.25481342281475,co-occur
  189. ALK,4p gain,26,10.9,4.47638326585695e-05,1.2541827195613,co-occur
  190. 13q gain,3p gain,83,34.8,0,1.25402378963675,co-occur
  191. 16p gain,16q gain,263,110.3,0,1.25362993264624,co-occur
  192. MET,1q loss,5,2.1,0.0909745556640625,1.25153478242313,co-occur
  193. 2p loss,8q loss,69,29,0,1.25054317325586,co-occur
  194. 16p loss,1p loss,306,128.8,0,1.24839899460181,co-occur
  195. BRAF,11q loss,8,19,0.0349925274725275,-1.24792646938889,exclusion
  196. 1p loss,20q loss,119,50.2,0,1.24520213808998,co-occur
  197. 8p gain,9q gain,22,9.3,0.000213724226804124,1.2422000069028,co-occur
  198. ERBB2,KRAS,10,23.6,0.0127735403726708,-1.23878602820413,exclusion
  199. ROS1,11q loss,5,11.8,0.20254594488189,-1.23878519682232,neutral
  200. 14q loss,20q loss,83,35.2,0,1.23753567155917,co-occur
  201. 5p loss,6q loss,70,29.7,0,1.23689171137502,co-occur
  202. 2q loss,4q loss,406,172.6,0,1.23404721484191,co-occur
  203. 16q gain,19q gain,95,40.4,0,1.23357201522645,co-occur
  204. EGFR L858R,ERBB2,20,47,0,-1.23266034239929,exclusion
  205. BRAF,21q loss,2,4.7,1,-1.23265661289376,neutral
  206. BRAF,5p loss,2,4.7,1,-1.23265661289376,neutral
  207. 3p gain,4q gain,120,51.1,0,1.23163904745507,co-occur
  208. ALK,5q gain,73,31.1,0,1.23098161737722,co-occur
  209. 3p loss,3q loss,381,162.4,0,1.23023931422562,co-occur
  210. 2q loss,3q loss,233,99.4,0,1.22901211475726,co-occur
  211. 14q loss,21q loss,32,13.7,0,1.22389540970728,co-occur
  212. 6q gain,9p gain,108,46.3,0,1.2219470357763,co-occur
  213. 3p gain,3q gain,201,86.2,0,1.22143563138706,co-occur
  214. 16q loss,7p loss,42,18.1,0,1.21439917701283,co-occur
  215. 7p loss,9q loss,61,26.4,0,1.20827100312387,co-occur
  216. 13q gain,2q gain,139,60.4,0,1.20246429322002,co-occur
  217. RET,6q gain,2,4.6,1,-1.20162978400264,neutral
  218. 10q gain,2p gain,48,20.9,0,1.19953107380453,co-occur
  219. 15q gain,2q gain,69,30.1,0,1.19683260469145,co-occur
  220. 2p loss,5p loss,40,17.5,0,1.19264461421918,co-occur
  221. 11q loss,7q loss,108,47.3,0,1.19111905228481,co-occur
  222. 3p gain,6q gain,92,40.3,0,1.19085382124228,co-occur
  223. 14q loss,5p loss,31,13.6,0,1.18866096860453,co-occur
  224. 1p gain,22q gain,126,55.3,0,1.18807220176702,co-occur
  225. 2q gain,6q gain,159,70,0,1.18359982297565,co-occur
  226. 3q loss,7q loss,109,48,0,1.18322165585167,co-occur
  227. ALK,11p loss,21,47.6,0,-1.18057186173151,exclusion
  228. 11q loss,20q loss,98,43.4,0,1.17508652135369,co-occur
  229. 10q gain,7p loss,9,4,0.0308978463933576,1.16992299770282,co-occur
  230. 12q loss,20q loss,165,73.4,0,1.16861394717358,co-occur
  231. 17p gain,17q gain,118,52.5,0,1.16839737915898,co-occur
  232. EGFR L858R,ROS1,9,20.2,0.0297776136363636,-1.16635749763381,exclusion
  233. ALK,22q gain,7,15.7,0.117937777777778,-1.16533658986896,neutral
  234. 11q gain,3p gain,142,63.4,0,1.16333605829647,co-occur
  235. 19p gain,20q loss,8,17.9,0.0740315942028986,-1.16188668498388,exclusion
  236. 16q loss,20q loss,164,73.3,0,1.16181060252025,co-occur
  237. 15q gain,4p gain,27,12.1,8.76354029062087e-05,1.15795170179818,co-occur
  238. 3q loss,6p loss,149,66.8,0,1.15739220372834,co-occur
  239. 20q loss,2p loss,101,45.4,0,1.15359091541512,co-occur
  240. 10q gain,5p loss,14,6.3,0.00654500279485746,1.15200183395083,co-occur
  241. ALK,1q loss,12,5.4,0.0124589756097561,1.15200162403541,co-occur
  242. 17q loss,1p loss,143,64.4,0,1.15088243041794,co-occur
  243. 6p loss,8q loss,59,26.6,0,1.14928841090612,co-occur
  244. 22q gain,9q gain,47,21.2,0,1.14859611844179,co-occur
  245. 13q gain,4q gain,163,73.6,0,1.14709418555199,co-occur
  246. 10q gain,17p gain,23,10.4,0.000436994981179423,1.14504957285576,co-occur
  247. BRAF,2p loss,9,19.9,0.0466125789473684,-1.14477064619258,exclusion
  248. 21q loss,5q loss,63,28.5,0,1.14438963212567,co-occur
  249. 19p gain,4q loss,110,49.8,0,1.14328571780026,co-occur
  250. 12q gain,15q gain,68,30.8,0,1.14260413919642,co-occur
  251. 16p loss,16q loss,414,187.9,0,1.1396656590344,co-occur
  252. 10q gain,11p gain,48,21.8,0,1.13870590960646,co-occur
  253. ALK,7p loss,9,4.1,0.0347917961914565,1.13429917594109,co-occur
  254. 17q loss,21q loss,30,13.7,4.47638326585695e-05,1.13078603537193,co-occur
  255. 10q gain,2q gain,58,26.5,0,1.13006024489176,co-occur
  256. 14q loss,7q loss,84,38.4,0,1.12928281299258,co-occur
  257. 19q gain,4q loss,159,72.8,0,1.12701630253617,co-occur
  258. 17q loss,7p loss,19,8.7,0.00135631990378833,1.12691121352599,co-occur
  259. 16q loss,21q loss,62,28.4,0,1.12637701047116,co-occur
  260. 1p loss,5p loss,42,19.3,0,1.12178807638663,co-occur
  261. 21q loss,9q gain,4,8.7,0.529566260869565,-1.12101345249748,neutral
  262. 4p gain,5p loss,15,6.9,0.00593783950617284,1.12029310465322,co-occur
  263. 4q loss,8q loss,106,48.8,0,1.11911105235678,co-occur
  264. 6p loss,6q loss,254,117,0,1.11831990068051,co-occur
  265. 11p loss,2p loss,281,129.5,0,1.11761797247081,co-occur
  266. 4q loss,7p loss,41,18.9,0,1.11723726383066,co-occur
  267. 19q gain,4q gain,24,52,0,-1.11547689373845,exclusion
  268. 19q gain,4p gain,37,17.1,0,1.11352849186688,co-occur
  269. 2q gain,8p gain,40,18.5,0,1.11247431009718,co-occur
  270. 2p loss,7q loss,107,49.5,0,1.11211020969933,co-occur
  271. 11p gain,22q gain,75,34.7,0,1.11195470940211,co-occur
  272. 3q loss,9p loss,366,170.1,0,1.1054604621114,co-occur
  273. 4q loss,5q loss,438,203.7,0,1.10448485163639,co-occur
  274. 15q gain,19q gain,38,17.7,0,1.10224962282278,co-occur
  275. BRAF,12q loss,15,32.2,0.00280669230769231,-1.10209767386423,exclusion
  276. 17q gain,19p gain,115,53.6,0,1.1013288116662,co-occur
  277. 7p loss,8p gain,6,2.8,0.0969905563618771,1.09953292556756,co-occur
  278. 11p gain,2q gain,128,59.8,0,1.09792629214647,co-occur
  279. ALK,5p loss,3,6.4,0.841147078384798,-1.09310684962527,neutral
  280. 17q gain,19q gain,167,78.3,0,1.09276379220707,co-occur
  281. 17q loss,5p loss,29,13.6,8.76354029062087e-05,1.09244568544077,co-occur
  282. MET,19q gain,13,6.1,0.0123465111231687,1.09162922015866,co-occur
  283. 11q loss,12q loss,246,115.5,0,1.09076539766066,co-occur
  284. 11q loss,4q loss,256,120.4,0,1.08830835465777,co-occur
  285. 4q gain,5q gain,216,101.6,0,1.08813083507256,co-occur
  286. mut_Negative,7p loss,41,19.3,0,1.08702266660397,co-occur
  287. 11p loss,1p loss,304,143.3,0,1.08503266084932,co-occur
  288. 19q gain,2p gain,71,33.5,0,1.08365770158821,co-occur
  289. 12q loss,2p loss,256,120.9,0,1.0823295026639,co-occur
  290. 11q gain,2p gain,183,86.6,0,1.07940463068752,co-occur
  291. 5p loss,6p loss,34,16.1,2.27347498286498e-05,1.0784735862615,co-occur
  292. 3q loss,7p loss,23,10.9,0.000496618839675608,1.0773050298532,co-occur
  293. 1q loss,2p loss,31,14.7,4.47638326585695e-05,1.07645154439843,co-occur
  294. 19p gain,8q loss,24,11.4,0.000676102532427424,1.07399991704517,co-occur
  295. ALK,4q loss,22,46.3,0,-1.07350832556242,exclusion
  296. 11p loss,2q loss,373,177.3,0,1.07298305155179,co-occur
  297. 17q gain,22q gain,163,77.6,0,1.07074330952591,co-occur
  298. PIK3CA,15q gain,7,14.7,0.2061463671875,-1.07038824832482,neutral
  299. 16q loss,17q loss,197,94,0,1.0674628875338,co-occur
  300. 17p gain,7p loss,9,4.3,0.0461656462240243,1.06558658952033,co-occur
  301. 17q loss,6p loss,112,53.6,0,1.06319368613975,co-occur
  302. 5p loss,7q loss,24,11.5,0.000695302096177559,1.06139989127007,co-occur
  303. ROS1,13q loss,15,31.3,0.00208944881889764,-1.06119965556522,exclusion
  304. PIK3CA,8q loss,29,13.9,0.000192724338282763,1.06096747686266,co-occur
  305. 10q gain,20q loss,34,16.3,4.47638326585695e-05,1.06066232113992,co-occur
  306. 11q loss,6p loss,137,65.7,0,1.06021050324349,co-occur
  307. 3p loss,8q loss,135,64.8,0,1.05889357328176,co-occur
  308. 17q loss,19q loss,283,136,0,1.05719534647965,co-occur
  309. 12q loss,16q loss,406,195.2,0,1.05652663613546,co-occur
  310. 15q loss,2p loss,430,206.9,0,1.05540297843876,co-occur
  311. 11q loss,3q loss,144,69.3,0,1.05514144619853,co-occur
  312. 20q loss,5p loss,22,10.6,0.00125962025316456,1.05343855369937,co-occur
  313. RET,11p loss,4,8.3,0.529566260869565,-1.05310946791222,neutral
  314. 16q gain,17p gain,56,27,0,1.05246714318683,co-occur
  315. 3q gain,9p gain,205,98.9,0,1.05158140813495,co-occur
  316. 2p gain,3q gain,244,117.8,0,1.05054154527677,co-occur
  317. 11q loss,5q loss,239,115.5,0,1.04911770201984,co-occur
  318. 1q loss,3p loss,68,32.9,0,1.04744693605442,co-occur
  319. 3q loss,4q loss,252,122.3,0,1.04299926914608,co-occur
  320. 14q loss,6p loss,110,53.4,0,1.04259173771097,co-occur
  321. 20q loss,7p loss,14,6.8,0.0117857438692098,1.04181908458192,co-occur
  322. 1q loss,22q loss,78,37.9,0,1.04127607988114,co-occur
  323. 14q loss,5q loss,193,93.8,0,1.04094094058567,co-occur
  324. 2p loss,3p loss,344,167.3,0,1.03997107525591,co-occur
  325. 13q gain,9p gain,82,39.9,0,1.03923497764385,co-occur
  326. 1p loss,2p loss,170,82.8,0,1.03783198415163,co-occur
  327. 17q loss,3q loss,116,56.5,0,1.03780190173841,co-occur
  328. 11q loss,3p loss,328,159.8,0,1.03742836028078,co-occur
  329. ALK,18q gain,6,12.3,0.340434766666667,-1.03562267816331,neutral
  330. 19p gain,2q loss,83,40.5,0,1.03518924606002,co-occur
  331. 14q loss,16p loss,185,90.3,0,1.03472729613945,co-occur
  332. 16p loss,5q loss,385,188.2,0,1.03259177855614,co-occur
  333. BRAF,5q gain,11,22.5,0.0474105235602094,-1.03242080734968,exclusion
  334. 11q gain,18q gain,102,49.9,0,1.03145728384507,co-occur
  335. 17q loss,3p loss,266,130.2,0,1.0306967406535,co-occur
  336. ALK,20q loss,34,16.7,6.61635638297872e-05,1.02568620409667,co-occur
  337. 11q loss,1p loss,161,79.1,0,1.02531099574883,co-occur
  338. 16q loss,1p loss,272,133.7,0,1.02460713117922,co-occur
  339. 17q loss,22q loss,305,150.1,0,1.02288521690281,co-occur
  340. 17p gain,7q loss,39,19.2,2.27347498286498e-05,1.02236743154674,co-occur
  341. 11q loss,3p gain,20,40.6,0.00188772357723577,-1.02147936140667,exclusion
  342. 2q gain,3p gain,85,41.9,0,1.02051242273595,co-occur
  343. BRAF,3p loss,22,44.6,0.000301545454545455,-1.01953985409951,exclusion
  344. 11p gain,5q gain,139,68.6,0,1.01880429492368,co-occur
  345. 3p loss,7q loss,224,110.7,0,1.01684344424469,co-occur
  346. 19q loss,7p loss,53,26.2,0,1.01642526947284,co-occur
  347. 17p loss,1q loss,75,37.1,0,1.01547121225523,co-occur
  348. 17q loss,2q loss,161,79.7,0,1.01440896760421,co-occur
  349. 16p loss,17q loss,183,90.6,0,1.01426061272311,co-occur
  350. 11q loss,14q loss,112,55.5,0,1.01293892457452,co-occur
  351. 1p loss,5q loss,270,133.8,0,1.01288123690514,co-occur
  352. ALK,11p gain,45,22.3,0,1.01288096494729,co-occur
  353. 17p gain,4p gain,23,11.4,0.00162190816935003,1.0125993985168,co-occur
  354. BRAF,20q loss,6,12.1,0.371699117647059,-1.0119714294858,neutral
  355. 11p loss,8q loss,101,50.1,0,1.01147263932198,co-occur
  356. 20q loss,22q loss,236,117.1,0,1.01104572167717,co-occur
  357. 10q gain,9q gain,27,13.4,0.000536664592408214,1.01072586428677,co-occur
  358. 14q loss,4q loss,197,97.8,0,1.01028918510993,co-occur
  359. BRAF,16q loss,16,32.2,0.00645590604026846,-1.008988329585,exclusion
  360. BRAF,5q loss,16,32.2,0.00645590604026846,-1.008988329585,exclusion
  361. 22q gain,4p gain,34,16.9,8.76354029062087e-05,1.00851107051207,co-occur
  362. 16p loss,20q loss,142,70.6,0,1.00815073837138,co-occur
  363. EGFR 19del,ERBB2,28,56.3,0,-1.00770783613844,exclusion
  364. BRAF,1p loss,11,22.1,0.0606210344827586,-1.00654218712946,exclusion
  365. 3p loss,5q loss,543,270.5,0,1.00532357721213,co-occur
  366. 16p loss,21q loss,55,27.4,0,1.00525546122872,co-occur
  367. 11q gain,2q gain,221,110.1,0,1.00523183495978,co-occur
  368. 18q gain,3q gain,136,67.9,0,1.0021230655,co-occur
  369. 11p loss,4q loss,437,218.2,0,1.00198214495996,co-occur
  370. 13q loss,2q loss,518,259,0,0.999999972148745,co-occur
  371. 5q loss,7q loss,160,80,0,0.999999909831568,co-occur
  372. 3p gain,5q gain,96,48,0,0.99999984971929,co-occur
  373. 13q gain,2p gain,95,47.5,0,0.999999848137388,co-occur
  374. MET,3p gain,12,6,0.026320993204391,0.999998797755635,co-occur
  375. 2q loss,3p loss,458,229.2,0,0.998740522782484,co-occur
  376. 11p loss,20q loss,157,78.6,0,0.998163249862808,co-occur
  377. 11q loss,17q loss,111,55.6,0,0.997402759008979,co-occur
  378. 11p gain,2p gain,94,47.1,0,0.996933544125757,co-occur
  379. 3q loss,6q loss,246,123.4,0,0.99531586281125,co-occur
  380. 20q loss,8q loss,35,17.6,8.76354029062087e-05,0.991779085680697,co-occur
  381. 11p loss,5p loss,60,30.2,0,0.990413713906445,co-occur
  382. 3p loss,4q loss,560,281.9,0,0.990243323846773,co-occur
  383. 17p loss,21q loss,88,44.4,0,0.986943686185884,co-occur
  384. 17p gain,1p gain,74,37.4,0,0.984486809840166,co-occur
  385. 15q loss,2q loss,560,283.4,0,0.982587043770052,co-occur
  386. KRAS,2p loss,31,61.2,0,-0.981263207767457,exclusion
  387. 11p loss,5q loss,413,209.3,0,0.980569436053654,co-occur
  388. 15q loss,8q loss,158,80.1,0,0.980050321853836,co-occur
  389. 2q loss,6p loss,186,94.3,0,0.979972869894623,co-occur
  390. 10q loss,8q loss,155,78.6,0,0.979666907431114,co-occur
  391. 10q loss,2p loss,400,203.1,0,0.977809725399582,co-occur
  392. 16p gain,22q gain,133,67.6,0,0.976330989163265,co-occur
  393. 17q loss,5q loss,185,94.1,0,0.975258567343565,co-occur
  394. 17p gain,8q loss,22,11.2,0.00285518775274408,0.974004159117382,co-occur
  395. 11p loss,7q loss,168,85.6,0,0.972778448600548,co-occur
  396. 13q loss,1q loss,73,37.2,0,0.972593652467597,co-occur
  397. 11p gain,4q gain,143,72.9,0,0.972024330326035,co-occur
  398. 13q gain,15q gain,49,25,0,0.970853371690112,co-occur
  399. 1q loss,6q loss,49,25,0,0.970853371690112,co-occur
  400. 11p gain,19p gain,47,24,0,0.969626056790032,co-occur
  401. 12q gain,3p gain,84,42.9,0,0.969411515623465,co-occur
  402. 19q gain,7q loss,56,28.6,0,0.969411433351931,co-occur
  403. 17p loss,17q loss,287,146.8,0,0.967198720711731,co-occur
  404. 3q loss,9q loss,334,170.9,0,0.966695664462241,co-occur
  405. 21q loss,3p loss,77,39.4,0,0.96666263732266,co-occur
  406. 1p loss,7q loss,107,54.8,0,0.965362869893794,co-occur
  407. 3q loss,4p gain,56,28.7,0,0.964375845212259,co-occur
  408. 12q loss,3q loss,229,117.4,0,0.9639151299869,co-occur
  409. 15q loss,17q loss,314,161,0,0.963703827114326,co-occur
  410. 8q loss,9q loss,133,68.2,0,0.96358249829884,co-occur
  411. BRAF,EGFR 19del,20,39,0.00208944881889764,-0.963473772549304,exclusion
  412. RET,16q loss,4,7.8,0.709634398976982,-0.963472366849633,neutral
  413. 11q loss,13q loss,352,180.7,0,0.961978883806478,co-occur
  414. 18q gain,1p gain,84,43.2,0,0.959357853294907,co-occur
  415. 17q loss,9q loss,266,137,0,0.957250301471114,co-occur
  416. 11p loss,16p loss,391,201.5,0,0.956388734079189,co-occur
  417. 16q gain,1p gain,175,90.2,0,0.956155505960015,co-occur
  418. BRAF,21q gain,5,9.7,0.603567465940055,-0.956055254338915,neutral
  419. 4q loss,5p loss,57,29.4,0,0.955145526607595,co-occur
  420. 1p loss,3p loss,359,185.2,0,0.95489970773737,co-occur
  421. 22q loss,7p loss,56,28.9,0,0.954357092866029,co-occur
  422. BRAF,17q loss,8,15.5,0.250060184501845,-0.954195437789895,neutral
  423. 1q loss,9q loss,67,34.6,0,0.953388856072188,co-occur
  424. 1p loss,4q loss,270,139.5,0,0.952694235235796,co-occur
  425. 5q loss,7p loss,35,18.1,4.47638326585695e-05,0.951364839878785,co-occur
  426. RET,7q gain,6,11.6,0.308152696245734,-0.951089238731408,neutral
  427. 11q loss,15q loss,382,197.6,0,0.950989656094438,co-occur
  428. 2p loss,6p loss,133,68.8,0,0.95094567446573,co-occur
  429. 19q loss,20q loss,205,106.1,0,0.950199187878389,co-occur
  430. 2q gain,3q gain,289,149.7,0,0.948995224877456,co-occur
  431. 20q loss,6q loss,149,77.2,0,0.948639488029027,co-occur
  432. 1p loss,22q loss,412,213.6,0,0.947732657857995,co-occur
  433. 2p loss,9q loss,339,176,0,0.945709805085115,co-occur
  434. 3q loss,5q loss,226,117.4,0,0.944890305141424,co-occur
  435. BRAF,ERBB2,4,7.7,0.846187872340426,-0.944856712703152,neutral
  436. 18q gain,2p gain,50,26,0,0.943416205290011,co-occur
  437. 21q loss,7p loss,5,2.6,0.185934587155963,0.943413808204419,neutral
  438. EGFR L858R,MET,9,17.3,0.154373459915612,-0.942774362240979,neutral
  439. 16p loss,1q loss,44,22.9,0,0.942155623315218,co-occur
  440. 2p loss,4q loss,242,126,0,0.941583258890572,co-occur
  441. ROS1,17q loss,5,9.6,0.615627989130435,-0.941104928365787,neutral
  442. 21q loss,4q loss,57,29.7,0,0.940498755599885,co-occur
  443. 11p gain,4p gain,46,24,0,0.938599167842371,co-occur
  444. mut_Negative,8q loss,26,49.8,0.000592321428571429,-0.937633853854795,exclusion
  445. 11q gain,4q gain,257,134.2,0,0.937383636513697,co-occur
  446. 17p gain,21q gain,27,14.1,0.0013172202166065,0.937263755795826,co-occur
  447. 10q gain,14q loss,40,20.9,4.47638326585695e-05,0.936496728083014,co-occur
  448. 11p gain,1p gain,150,78.4,0,0.936036853430488,co-occur
  449. EGFR L858R,8p gain,16,30.6,0.0162834545454545,-0.935459317590061,exclusion
  450. 3p loss,9q loss,753,393.9,0,0.934820430478623,co-occur
  451. 2q loss,6q loss,333,174.2,0,0.934777513865622,co-occur
  452. 2p loss,5q loss,231,120.9,0,0.934078550179016,co-occur
  453. 12q loss,15q loss,639,334.5,0,0.933809699753025,co-occur
  454. 12q loss,5q loss,373,195.5,0,0.932006987830895,co-occur
  455. 11p loss,7p loss,37,19.4,2.27347498286498e-05,0.931468264589665,co-occur
  456. 7q loss,9p loss,221,115.9,0,0.931165744075074,co-occur
  457. 8p loss,8q loss,138,72.4,0,0.930606569858184,co-occur
  458. 16p gain,19p gain,89,46.7,0,0.930382639316414,co-occur
  459. MET,4p gain,8,4.2,0.0907111187103078,0.929609040492173,co-occur
  460. 11p loss,6p loss,227,119.2,0,0.929308004239504,co-occur
  461. 1p gain,6p gain,256,134.6,0,0.927465349448442,co-occur
  462. 15q gain,19p gain,23,12.1,0.00329983323749281,0.926626248618899,co-occur
  463. 11p loss,14q loss,191,100.5,0,0.926377068838852,co-occur
  464. 16q loss,22q loss,592,311.5,0,0.92636499066035,co-occur
  465. 13q loss,5p loss,84,44.2,0,0.926342803622534,co-occur
  466. RET,17p gain,1,1.9,1,-0.925992584789761,neutral
  467. RET,19p gain,1,1.9,1,-0.925992584789761,neutral
  468. RET,8q loss,1,1.9,1,-0.925992584789761,neutral
  469. ROS1,7p loss,1,1.9,1,-0.925992584789761,neutral
  470. 11p gain,16p gain,182,95.8,0,0.92584081802437,co-occur
  471. 16q loss,1q loss,45,23.7,0,0.925037654185684,co-occur
  472. 9p loss,9q loss,783,412.4,0,0.924967958252613,co-occur
  473. 18q loss,3q loss,314,165.4,0,0.924805283328809,co-occur
  474. 21q loss,7q loss,22,11.6,0.00418394318181818,0.923378130465326,co-occur
  475. 4q loss,6q loss,406,214.2,0,0.922521215503935,co-occur
  476. 11q gain,5q gain,239,126.1,0,0.922442288494898,co-occur
  477. 19q loss,1q loss,65,34.3,0,0.922230943085333,co-occur
  478. 12q loss,16p loss,356,188.2,0,0.919610576992819,co-occur
  479. 1q loss,2q loss,38,20.1,4.47638326585695e-05,0.918803579050011,co-occur
  480. 11p loss,1q loss,48,25.4,0,0.918205641407727,co-occur
  481. mut_Negative,14q gain,148,279.5,0,-0.917251061351844,exclusion
  482. 16p gain,5q gain,252,133.5,0,0.916583940995124,co-occur
  483. 17q gain,9q gain,127,67.3,0,0.916149986279495,co-occur
  484. ALK,PIK3CA,7,13.2,0.409096666666667,-0.915110134372418,neutral
  485. 16q loss,5q loss,368,195.2,0,0.914752678676602,co-occur
  486. RET,9q loss,6,11.3,0.367697606557377,-0.913287239037648,neutral
  487. 7q loss,9q loss,219,116.4,0,0.911839753513869,co-occur
  488. ROS1,13q gain,19,10.1,0.00795196448390677,0.911643456481908,co-occur
  489. 20q loss,2q loss,117,62.2,0,0.911521935702906,co-occur
  490. 14q loss,2p loss,109,58,0,0.910203213266188,co-occur
  491. 12q gain,19p gain,56,29.8,0,0.910114269981125,co-occur
  492. 13q loss,3q loss,345,183.6,0,0.910030266378174,co-occur
  493. 13q loss,2p loss,355,189.1,0,0.908669625676239,co-occur
  494. 4q gain,9p gain,110,58.6,0,0.908530838950191,co-occur
  495. 6q loss,9p loss,559,297.8,0,0.908504506511852,co-occur
  496. 12q gain,5p loss,33,17.6,0.000335686274509804,0.906890213075909,co-occur
  497. ROS1,14q loss,18,9.6,0.0101626457645765,0.906889894298989,co-occur
  498. 16p loss,22q loss,563,300.3,0,0.906730424993784,co-occur
  499. 19p loss,19q loss,1037,553.4,0,0.906021332933172,co-occur
  500. 8q loss,9p loss,127,67.8,0,0.905471219334351,co-occur
  501. 11p loss,12q loss,392,209.3,0,0.905281310620778,co-occur
  502. 2q gain,7q gain,333,177.8,0,0.905266815311578,co-occur
  503. 18q loss,2p loss,319,170.4,0,0.904631048986743,co-occur
  504. 2p loss,6q loss,238,127.2,0,0.903862850108971,co-occur
  505. 15q loss,20q loss,235,125.6,0,0.903824239087762,co-occur
  506. 15q loss,6p loss,356,190.4,0,0.902843727299161,co-occur
  507. 11p loss,21q loss,57,30.5,0,0.902152456691536,co-occur
  508. 10q loss,11p loss,657,351.7,0,0.901548016522599,co-occur
  509. 22q gain,2p gain,62,33.2,0,0.901084772073409,co-occur
  510. 15q loss,1q loss,76,40.7,0,0.900970459422501,co-occur
  511. 6q loss,7q loss,157,84.1,0,0.900586773870067,co-occur
  512. 17q loss,19q gain,18,33.6,0.0199819277108434,-0.900463954325524,exclusion
  513. 2q loss,9q loss,450,241.1,0,0.900293322723728,co-occur
  514. KRAS,2q loss,45,83.9,0,-0.898745660578031,exclusion
  515. 13q gain,2q loss,45,83.9,0,-0.898745660578031,exclusion
  516. KRAS,16p gain,52,96.8,0,-0.896495295843549,exclusion
  517. 18q loss,4q loss,534,287,0,0.895788981760508,co-occur
  518. 12q gain,2p gain,109,58.6,0,0.895355451405706,co-occur
  519. 20q loss,3q loss,82,44.1,0,0.894845102744639,co-occur
  520. BRAF,3p gain,21,11.3,0.0067969793411502,0.8940659655277,co-occur
  521. 12q gain,7p loss,21,11.3,0.00510451521984216,0.8940659655277,co-occur
  522. 2q gain,9q gain,68,36.6,0,0.89369091583576,co-occur
  523. 10q loss,12q loss,610,328.4,0,0.893355095279515,co-occur
  524. 20q loss,22q gain,14,26,0.0706875242718447,-0.89308432047,exclusion
  525. RET,10q loss,7,13,0.252769927007299,-0.893083844857034,neutral
  526. 21q loss,4p gain,13,7,0.0344200826019618,0.893083844857034,co-occur
  527. 11q loss,16q loss,214,115.3,0,0.892218225927069,co-occur
  528. 1q loss,4q loss,46,24.8,0,0.891293472455069,co-occur
  529. 2p gain,6p gain,150,80.9,0,0.890750810802282,co-occur
  530. 12q loss,3p loss,501,270.5,0,0.88918198483032,co-occur
  531. 19q gain,8p gain,20,10.8,0.00885144198895028,0.888968073130473,co-occur
  532. BRAF,15q gain,15,8.1,0.0255594918805657,0.88896786830374,co-occur
  533. MET,8p gain,5,2.7,0.191699514652015,0.888966229693381,neutral
  534. 11q loss,18q loss,301,162.7,0,0.887549195232508,co-occur
  535. 15q gain,20q loss,10,18.5,0.207567653846154,-0.887524607882214,neutral
  536. 11q gain,22q gain,118,63.8,0,0.887158426618889,co-occur
  537. 10q gain,7q gain,120,64.9,0,0.886743920426265,co-occur
  538. 2p gain,4q gain,129,69.8,0,0.886072029247966,co-occur
  539. 15q loss,21q loss,90,48.7,0,0.886003093192884,co-occur
  540. 16p gain,1p gain,282,152.6,0,0.885940157070067,co-occur
  541. 13q loss,6q loss,594,321.6,0,0.885195503937075,co-occur
  542. 19p gain,3q loss,53,28.7,0,0.884941392300348,co-occur
  543. 19p gain,7q loss,36,19.5,0.000335686274509804,0.88452244348521,co-occur
  544. 16q loss,2p loss,223,120.8,0,0.884423200749039,co-occur
  545. 11p loss,16q loss,386,209.1,0,0.884407753945925,co-occur
  546. 22q gain,6p gain,110,59.6,0,0.884119177041043,co-occur
  547. 11q loss,21q loss,31,16.8,0.000714870689655172,0.883806589134107,co-occur
  548. 2p loss,2q gain,40,73.8,0,-0.883620651099076,exclusion
  549. 3p loss,9p loss,723,391.9,0,0.883510057377723,co-occur
  550. 6p loss,7p loss,19,10.3,0.00910297625621204,0.883354439786592,co-occur
  551. 14q loss,6q loss,182,98.7,0,0.882816393728914,co-occur
  552. 4q loss,9p loss,544,295.1,0,0.88240270833748,co-occur
  553. 13q loss,21q loss,82,44.5,0,0.881818425388998,co-occur
  554. MET,10q gain,7,3.8,0.133305259189444,0.881353767931923,neutral
  555. 21q loss,8p loss,81,44,0,0.880418234472616,co-occur
  556. 20q loss,3p loss,187,101.6,0,0.880137803154762,co-occur
  557. 5q gain,8p gain,39,21.2,0.000109040105193951,0.879409548591801,co-occur
  558. 13q loss,14q loss,270,146.8,0,0.879107394251903,co-occur
  559. 13q loss,6p loss,320,174,0,0.878984561209348,co-occur
  560. 1p loss,9q loss,358,194.9,0,0.877225463170153,co-occur
  561. 20q loss,9q loss,196,106.9,0,0.874591739931533,co-occur
  562. 17q gain,2p gain,193,105.3,0,0.874095348872693,co-occur
  563. 1q loss,9p loss,63,34.4,0,0.872943073296343,co-occur
  564. 11p loss,9q loss,558,304.8,0,0.872402197745464,co-occur
  565. 22q loss,2p loss,353,192.9,0,0.871815006189199,co-occur
  566. 11p loss,3p loss,530,289.7,0,0.871432652488561,co-occur
  567. 11q loss,6q loss,222,121.5,0,0.869603308990259,co-occur
  568. 19q gain,20q gain,171,93.6,0,0.869415820423907,co-occur
  569. 10q loss,2q loss,508,278.2,0,0.868706053658602,co-occur
  570. 1p loss,2q loss,207,113.4,0,0.86821006991809,co-occur
  571. 2p gain,9p gain,69,37.8,0,0.868209954865377,co-occur
  572. 1p loss,6q loss,257,140.8,0,0.868120979115803,co-occur
  573. 7p loss,9p gain,4,7.3,0.978515,-0.867894833552784,neutral
  574. 15q gain,18q gain,25,13.7,0.00373399428571429,0.867751725717772,co-occur
  575. 6p loss,9p loss,294,161.2,0,0.86696437076981,co-occur
  576. 3p gain,8q loss,9,16.4,0.300257604166667,-0.865698184986639,neutral
  577. 18q loss,1q loss,61,33.5,0,0.864647952957306,co-occur
  578. 2p loss,9p loss,319,175.2,0,0.864553611931002,co-occur
  579. 11q gain,15q gain,83,45.6,0,0.864077369507758,co-occur
  580. 11p gain,7p loss,5,9.1,0.76389039408867,-0.86393715041507,neutral
  581. 3q gain,6q gain,262,144.1,0,0.862496431197134,co-occur
  582. 10q gain,22q gain,28,15.4,0.00216746791131855,0.862496054683545,co-occur
  583. MET,16q gain,18,9.9,0.013041963223364,0.862495820480105,co-occur
  584. ROS1,18q gain,10,5.5,0.0776483275606136,0.862495295864877,co-occur
  585. RET,6p loss,8,4.4,0.103007462686567,0.862495000769099,neutral
  586. BRAF,11p loss,19,34.5,0.0151692073170732,-0.860596602194019,exclusion
  587. 13q loss,3p loss,768,423.2,0,0.859766668189437,co-occur
  588. 11p gain,15q gain,45,24.8,6.61635638297872e-05,0.85958461969727,co-occur
  589. 14q loss,17q loss,82,45.2,0,0.859300993848384,co-occur
  590. 13q loss,4q loss,578,318.7,0,0.858870453302189,co-occur
  591. 19p gain,20q gain,116,64,0,0.857980894076746,co-occur
  592. 17q loss,19p loss,334,184.3,0,0.857791996645456,co-occur
  593. 11p loss,15q loss,649,358.2,0,0.857453122853804,co-occur
  594. 3p loss,6p loss,279,154,0,0.857334729162292,co-occur
  595. 16p loss,16q gain,60,108.7,0,-0.857317426804904,exclusion
  596. 15q loss,9q loss,882,487,0,0.856856870208137,co-occur
  597. 22q gain,3p gain,44,24.3,8.76354029062087e-05,0.856546944102537,co-occur
  598. 19q gain,6p gain,109,60.2,0,0.856492635611605,co-occur
  599. 1p gain,6q gain,166,91.7,0,0.856189532220875,co-occur
  600. 18q loss,7q loss,204,112.7,0,0.856081579395004,co-occur
  601. 10q loss,11q loss,351,194,0,0.855414344854133,co-occur
  602. 15q loss,3p loss,837,462.9,0,0.854527046215864,co-occur
  603. 22q gain,3q loss,75,41.5,0,0.853779103870965,co-occur
  604. 18q gain,9q gain,30,16.6,0.0016585,0.853778870954087,co-occur
  605. 12q loss,1q loss,43,23.8,2.27347498286498e-05,0.853374815617693,co-occur
  606. 21q loss,6q loss,54,29.9,0,0.852813707511828,co-occur
  607. 12q loss,2q loss,299,165.6,0,0.852442772717548,co-occur
  608. 2q loss,5q loss,299,165.6,0,0.852442772717548,co-occur
  609. 16p loss,9p gain,137,75.9,0,0.852004017660241,co-occur
  610. ALK,20q gain,33,59.5,0.000301545454545455,-0.850423449238975,exclusion
  611. 10q loss,17q loss,285,158.1,0,0.850124510949918,co-occur
  612. 6p loss,9q loss,292,162,0,0.849974516347509,co-occur
  613. 18q loss,3p loss,687,381.2,0,0.849761962949304,co-occur
  614. 11q loss,9q loss,303,168.2,0,0.849140049946274,co-occur
  615. 18q loss,2q loss,420,233.3,0,0.848202993080547,co-occur
  616. 18q gain,7p loss,9,5,0.0968261870155039,0.847995624161353,neutral
  617. 15q gain,21q loss,4,7.2,1,-0.847995303563577,neutral
  618. ALK,RET,1,1.8,1,-0.847990494626861,neutral
  619. 19q loss,4q gain,378,210.1,0,0.84731004193486,neutral
  620. 20q loss,4p loss,154,85.6,0,0.84724757432348,neutral
  621. 5q loss,9q loss,512,284.6,0,0.847208125846493,neutral
  622. 11p gain,16q gain,102,56.7,0,0.847148398913765,neutral
  623. 11p gain,6p gain,152,84.5,0,0.847048001342415,neutral
  624. 14q gain,8q loss,113,62.9,0,0.84519074873212,neutral
  625. 16q loss,19p loss,687,382.5,0,0.844850334520497,neutral
  626. 11p loss,17q loss,181,100.8,0,0.844493995053056,neutral
  627. ALK,2q loss,21,37.7,0.0140412883435583,-0.844174891282746,neutral
  628. 18q loss,6q loss,520,289.7,0,0.843951916589928,neutral
  629. 4p gain,7q loss,35,19.5,0.000695302096177559,0.843880470437822,neutral
  630. 15q loss,1p loss,411,229,0,0.843790767687026,neutral
  631. 11p gain,9q gain,54,30.1,2.27347498286498e-05,0.843195708156254,neutral
  632. 3p loss,7p loss,45,25.1,0,0.842237383086341,neutral
  633. 16q gain,9q gain,62,34.6,0,0.841495993366418,neutral
  634. 19q loss,2p loss,313,174.7,0,0.841283012414431,neutral
  635. 4q gain,7q gain,388,216.7,0,0.840357469587997,neutral
  636. 21q loss,9q loss,74,41.4,0,0.837894349498742,neutral
  637. 16p loss,19q loss,486,272,0,0.837349639000266,neutral
  638. 14q loss,9p loss,243,136,0,0.837349615645093,neutral
  639. 12q loss,1p loss,239,133.8,0,0.83693245476572,neutral
  640. 14q loss,2q loss,142,79.5,0,0.836864084347502,neutral
  641. 14q loss,3p loss,232,129.9,0,0.836723325690213,neutral
  642. ROS1,12q gain,7,12.5,0.522938181818182,-0.836500360881248,neutral
  643. 14q gain,22q gain,166,93,0,0.83588055201974,neutral
  644. 12q gain,7q loss,89,49.9,0,0.834765393499843,neutral
  645. 15q loss,3q loss,358,200.8,0,0.834200286652229,neutral
  646. 17q loss,9p loss,243,136.3,0,0.834170705211071,neutral
  647. 14q loss,22q loss,267,149.8,0,0.833802075841609,neutral
  648. 10q loss,15q loss,1001,561.9,0,0.833056657496394,neutral
  649. mut_Negative,11q loss,69,122.9,0,-0.83281655700862,neutral
  650. 12q loss,17p loss,543,305.1,0,0.831669997396065,neutral
  651. 10q loss,1q loss,71,39.9,0,0.83143011978851,neutral
  652. EGFR L858R,9q gain,34,60.5,0.000301545454545455,-0.831400210164217,neutral
  653. 17p gain,19q loss,38,67.6,0,-0.831023661711107,neutral
  654. 1p loss,8p gain,37,20.8,0.000355318210459987,0.830941438689528,neutral
  655. 2p gain,6q gain,98,55.1,0,0.830729315813078,neutral
  656. 21q loss,4p loss,59,33.2,0,0.829531522880207,neutral
  657. 11p gain,8p gain,27,15.2,0.00337418965517241,0.828887668797481,neutral
  658. 15q loss,16q loss,593,334.1,0,0.827752103245615,neutral
  659. 19q loss,22q loss,800,450.8,0,0.827512470520559,neutral
  660. 16p loss,6p loss,190,107.1,0,0.827040879693957,neutral
  661. 17q gain,6p gain,335,188.9,0,0.826538360536172,neutral
  662. 18q loss,6p loss,278,156.8,0,0.826159283382556,neutral
  663. 14q loss,16q loss,166,93.7,0,0.825062221514858,neutral
  664. 18q loss,9p loss,707,399.1,0,0.82495992044265,neutral
  665. 22q loss,6p loss,314,177.5,0,0.822945499166692,neutral
  666. 4p gain,9q gain,26,14.7,0.00462050962627407,0.822695041649827,neutral
  667. MET,9q gain,3,5.3,1,-0.821027772042773,neutral
  668. 5q gain,9q gain,74,41.9,0,0.820574877457152,neutral
  669. 12q gain,19q gain,77,43.6,0,0.820530167274997,neutral
  670. 2p loss,8p loss,330,186.9,0,0.820199421915307,neutral
  671. 10q gain,12q gain,48,27.2,6.61635638297872e-05,0.819427524517124,neutral
  672. 1q loss,5q loss,42,23.8,6.61635638297872e-05,0.819427491682698,neutral
  673. RET,10q gain,3,1.7,0.356185700043346,0.819424076917177,neutral
  674. 4q loss,9q loss,523,296.6,0,0.818292327623565,neutral
  675. 13q gain,5q gain,122,69.2,0,0.818037114585284,neutral
  676. 14q gain,6q gain,272,154.3,0,0.817868549107873,neutral
  677. 10q loss,5q loss,578,328.4,0,0.815615346639328,neutral
  678. 16p loss,4p loss,386,219.4,0,0.815037293371387,neutral
  679. 10q loss,9q loss,841,478.1,0,0.814793381773739,neutral
  680. 11p loss,13q loss,576,327.5,0,0.814573886012532,neutral
  681. 20q gain,2p gain,221,125.7,0,0.814061670365733,neutral
  682. 18q loss,8q loss,116,66,0,0.813586781549234,neutral
  683. 3p loss,6q loss,500,284.5,0,0.813499420499563,neutral
  684. 4p gain,8p gain,13,7.4,0.0537260563380282,0.812913607577918,neutral
  685. 17p loss,20q loss,201,114.5,0,0.811847848858294,neutral
  686. 2q loss,9p loss,421,239.9,0,0.811387049791265,neutral
  687. 12q loss,21q loss,50,28.5,2.27347498286498e-05,0.810965957940265,neutral
  688. 13q gain,8p gain,27,15.4,0.00385346241457859,0.81002865387267,neutral
  689. 13q loss,17q loss,258,147.2,0,0.809593352162844,neutral
  690. 15q gain,20q gain,116,66.2,0,0.809221589648226,neutral
  691. 15q loss,22q loss,935,533.7,0,0.808937342071991,neutral
  692. 13q loss,7q loss,219,125.1,0,0.80784903087586,neutral
  693. 11p loss,3q loss,220,125.7,0,0.807518824795689,neutral
  694. MET,2q gain,6,10.5,0.709634398976982,-0.807353891562496,neutral
  695. 12q loss,9q loss,498,284.6,0,0.807210058706716,neutral
  696. 1p gain,3p gain,96,54.9,0,0.806228144098088,neutral
  697. 6q loss,8q loss,86,49.2,0,0.805678218774778,neutral
  698. ROS1,4q gain,26,14.9,0.00371929061784897,0.803198879197514,neutral
  699. 16p loss,19p loss,643,368.6,0,0.802762649881679,neutral
  700. 5q gain,6q gain,140,80.3,0,0.801954857701524,neutral
  701. 17p loss,1p loss,364,208.9,0,0.801125928591916,neutral
  702. 12q loss,6q gain,200,114.8,0,0.800877304450855,neutral
  703. 17q loss,3p gain,19,33.1,0.0488911979166667,-0.800831475022754,neutral
  704. 10q loss,16q loss,571,328,0,0.799794912026268,neutral
  705. 13q loss,18q loss,750,430.9,0,0.799537482915186,neutral
  706. 16q loss,19q loss,491,282.1,0,0.799516336858012,neutral
  707. 19q loss,5p loss,71,40.8,0,0.799249722015337,neutral
  708. TP53,RET,10,17.4,0.107690941704036,-0.799086692514527,neutral
  709. RET,17q gain,5,8.7,0.786695317073171,-0.799086078956016,neutral
  710. 11q gain,13q gain,159,91.4,0,0.798760628005095,neutral
  711. 16q loss,3p loss,470,270.2,0,0.798633059428719,neutral
  712. 11q loss,9p loss,291,167.3,0,0.798581671100431,neutral
  713. KRAS,7p loss,16,9.2,0.0295131929277171,0.798365472368537,neutral
  714. 15q gain,7p loss,8,4.6,0.132038504716981,0.798364805907866,neutral
  715. 20q gain,22q gain,161,92.6,0,0.797976523551536,neutral
  716. 13q loss,9p loss,770,443,0,0.797551733197066,neutral
  717. 16p loss,9q loss,476,274,0,0.796785658003033,neutral
  718. 17p gain,22q loss,43,74.7,0,-0.796771440821195,neutral
  719. 2p gain,9q gain,50,28.8,8.76354029062087e-05,0.795859070823063,neutral
  720. 19q loss,9q loss,713,411.3,0,0.793710989988555,neutral
  721. 17p gain,2p gain,39,22.5,0.000597472049689441,0.793548851256678,neutral
  722. ROS1,4q loss,12,20.8,0.176727611336032,-0.793548613890425,neutral
  723. RET,14q gain,6,10.4,0.588881095890411,-0.793548105248946,neutral
  724. MET,21q gain,3,5.2,1,-0.793547087967991,neutral
  725. 19q loss,1p loss,335,193.4,0,0.792573269224746,neutral
  726. 6p gain,7p loss,27,15.6,0.00307625,0.791412987715763,neutral
  727. 1p gain,20q gain,362,209.2,0,0.791106816614603,neutral
  728. 16q gain,9p loss,283,163.6,0,0.790629267571827,neutral
  729. 10q loss,3p loss,786,454.4,0,0.790566464246735,neutral
  730. 1p loss,3q loss,139,80.4,0,0.789817400783277,neutral
  731. 16p gain,17p gain,79,45.7,0,0.789658354937851,neutral
  732. 16q loss,6q gain,198,114.6,0,0.788893333183837,neutral
  733. 17q gain,3p gain,133,77,0,0.788495815916615,neutral
  734. 16q loss,9q loss,491,284.3,0,0.788308904161803,neutral
  735. 14q loss,18q loss,228,132.2,0,0.786311601690783,neutral
  736. 19p loss,20q loss,248,143.8,0,0.786276402681631,neutral
  737. 17q loss,4q loss,169,98,0,0.786169530319772,neutral
  738. 10q loss,3q loss,340,197.2,0,0.785875163920383,neutral
  739. 18q loss,1p loss,325,188.6,0,0.785110010023735,neutral
  740. 15q gain,1p gain,68,39.5,0,0.783681939995052,neutral
  741. 8p gain,9p gain,21,12.2,0.0156448877005348,0.783507684564277,neutral
  742. 15q loss,4q loss,600,348.6,0,0.783389913917076,neutral
  743. 20q gain,6p gain,388,225.6,0,0.782289557909311,neutral
  744. MET,20q loss,11,6.4,0.0866358734052993,0.781358770855769,neutral
  745. 11p loss,9p loss,521,303.3,0,0.780537854665982,neutral
  746. 4q loss,6p loss,199,115.9,0,0.779887812444211,neutral
  747. 13q loss,5q loss,525,305.8,0,0.779728996382217,neutral
  748. 17p loss,6p loss,298,173.6,0,0.779545348213078,neutral
  749. 12q gain,16q gain,121,70.5,0,0.779311799469211,neutral
  750. 19p loss,9q loss,957,557.6,0,0.779288352706851,neutral
  751. 12q loss,22q loss,535,311.9,0,0.778455319512932,neutral
  752. 11q loss,1q loss,24,14,0.00870092971776425,0.777607149290271,neutral
  753. 18q loss,5q loss,472,275.4,0,0.777258278294372,neutral
  754. 15q gain,6p gain,73,42.6,0,0.777042892510217,neutral
  755. 16p gain,19q gain,117,68.3,0,0.776550958258813,neutral
  756. 10q loss,7q loss,230,134.3,0,0.77617451170686,neutral
  757. 11p loss,22q loss,572,334,0,0.776167026331817,neutral
  758. 13q loss,15q loss,896,523.2,0,0.776136179973945,neutral
  759. mut_Negative,1p gain,97,166.1,0,-0.77599535901346,neutral
  760. 17p gain,6p gain,69,40.3,0,0.775816374234987,neutral
  761. 18q loss,20q loss,177,103.4,0,0.775513116637991,neutral
  762. 17p loss,2p loss,323,188.7,0,0.775439710191897,neutral
  763. 5p loss,9p loss,70,40.9,0,0.775253932252726,neutral
  764. 22q loss,9q loss,776,454.1,0,0.773046602471161,neutral
  765. 2p gain,7q gain,239,139.9,0,0.772614612943864,neutral
  766. 17p gain,20q gain,107,62.7,0,0.771073353222892,neutral
  767. 20q gain,3p gain,157,92,0,0.771058727911345,neutral
  768. 13q gain,3q gain,212,124.3,0,0.770237920384162,neutral
  769. 14q loss,9q loss,233,136.7,0,0.769316668316516,neutral
  770. 17q loss,18q loss,226,132.6,0,0.769241952225498,neutral
  771. 15q loss,5q loss,570,334.5,0,0.768955690591186,neutral
  772. 16p loss,19p gain,27,46,0.0086718954248366,-0.768674233191469,neutral
  773. 10q loss,4q loss,583,342.2,0,0.768656106185091,neutral
  774. KRAS,17q loss,28,47.7,0.00963,-0.768562226264167,neutral
  775. 12q loss,15q gain,29,49.4,0.00526144827586207,-0.768457936132281,neutral
  776. 5p loss,9q loss,70,41.1,0,0.768216383229274,neutral
  777. 12q loss,19q loss,481,282.5,0,0.767786005392301,neutral
  778. 19p loss,22q loss,1040,611,0,0.767339233469763,neutral
  779. 21q loss,2q loss,41,24.1,0.000355318210459987,0.766590516523757,neutral
  780. 11q gain,20q gain,411,241.6,0,0.766517914631837,neutral
  781. 17p gain,4q loss,83,48.8,0,0.766230066855871,neutral
  782. 12q loss,19p loss,651,382.9,0,0.765689867685936,neutral
  783. 15q gain,2p loss,18,30.6,0.0815168396226415,-0.765534416334845,neutral
  784. 19q gain,1q loss,5,8.5,0.994658713968958,-0.765533558263066,neutral
  785. 17p gain,21q loss,4,6.8,1,-0.765533261238677,neutral
  786. 11q loss,16p loss,189,111.2,0,0.76522939297924,neutral
  787. ALK,6p loss,43,25.3,0.000436994981179423,0.765199040170505,neutral
  788. 11q loss,22q loss,313,184.3,0,0.764106554002053,neutral
  789. 16p loss,4q loss,333,196.1,0,0.763932611521298,neutral
  790. 7q loss,8p loss,210,123.7,0,0.763543779648342,neutral
  791. 11p gain,18q gain,46,27.1,0.000295031766200762,0.763340790860131,neutral
  792. 11p gain,7q gain,248,146.2,0,0.762396768815438,neutral
  793. 21q loss,22q loss,77,45.4,0,0.762166017880126,neutral
  794. 1p gain,1q gain,530,312.7,0,0.761213121496831,neutral
  795. 13q loss,8q loss,124,73.2,0,0.760424486247092,neutral
  796. 19p gain,22q loss,45,76.2,0,-0.759865865007468,neutral
  797. 17p loss,22q loss,824,486.8,0,0.759315157228988,neutral
  798. 6p loss,7q loss,77,45.5,0,0.758991770783387,neutral
  799. 11q gain,3q gain,383,226.4,0,0.758470407925436,neutral
  800. 16p loss,5p loss,46,27.2,0.000130333988212181,0.758026992920867,neutral
  801. BRAF,10q loss,32,54.1,0.000865304347826087,-0.75755650476921,neutral
  802. 19p loss,7p loss,60,35.5,0,0.757143310160078,neutral
  803. 12q gain,22q gain,73,43.2,0,0.756865015276208,neutral
  804. 22q loss,5p loss,76,45,0,0.756074286343331,neutral
  805. 17q loss,8q loss,38,22.5,0.00125962025316456,0.756074155572797,neutral
  806. 11p loss,18q loss,498,295,0,0.755430767883741,neutral
  807. 3p loss,5p loss,66,39.1,0,0.755297266552938,neutral
  808. 18q loss,9q loss,677,401.1,0,0.755193852989506,neutral
  809. 10q loss,16p loss,533,316.1,0,0.753754479169026,neutral
  810. 14q loss,3q loss,95,56.4,0,0.752232246885174,neutral
  811. 15q gain,16q gain,48,28.5,0.000234191270860077,0.752072280909153,neutral
  812. 11q loss,18q gain,19,32,0.0768147368421053,-0.752072178085565,neutral
  813. 2q gain,9p gain,81,48.1,0,0.751884892175865,neutral
  814. KRAS,ROS1,6,10.1,0.826011976190476,-0.751319911063769,neutral
  815. 21q loss,22q gain,6,10.1,0.86056,-0.751319911063769,neutral
  816. 19q gain,5p loss,17,10.1,0.0362998871794872,0.751178873619575,neutral
  817. MET,12q gain,18,10.7,0.0276330151278039,0.750385563113058,neutral
  818. 19q loss,6q gain,279,165.9,0,0.749951200508462,neutral
  819. BRAF,18q loss,27,45.4,0.00645590604026846,-0.74973267368289,neutral
  820. 4q gain,8p gain,38,22.6,0.000911820403176542,0.749676387211804,neutral
  821. 15q loss,7q loss,230,136.8,0,0.74956558821155,neutral
  822. ERBB2,16q gain,16,26.9,0.139798025751073,-0.749533902302902,neutral
  823. 15q gain,5q gain,58,34.5,4.47638326585695e-05,0.749456368917491,neutral
  824. 3q loss,8p loss,305,181.5,0,0.748839662268646,neutral
  825. 12q gain,17q gain,230,136.9,0,0.748511371916582,neutral
  826. 11q loss,8p loss,300,178.6,0,0.748230387573859,neutral
  827. 14q gain,20q gain,591,351.9,0,0.747992599729013,neutral
  828. 7p loss,9p loss,44,26.2,4.47638326585695e-05,0.747936489225552,neutral
  829. 11q gain,8p gain,47,28,0.000150772727272727,0.747233721328255,neutral
  830. 7p loss,8p loss,47,28,2.27347498286498e-05,0.747233721328255,neutral
  831. 1q loss,3q loss,24,14.3,0.0106078496982995,0.747018851075639,neutral
  832. BRAF,9q loss,28,46.9,0.00510307692307692,-0.744160887933123,neutral
  833. RET,6p gain,4,6.7,1,-0.74415964211189,neutral
  834. 16q loss,6p loss,186,111.1,0,0.743443752315016,neutral
  835. 11p gain,17q loss,79,47.2,0,0.743065670666541,neutral
  836. 13q loss,9q loss,745,445.2,0,0.742786819854412,neutral
  837. 19q loss,6p loss,269,160.8,0,0.742338730177005,neutral
  838. 13q loss,20q loss,192,114.8,0,0.741983618402901,neutral
  839. 11q gain,1p gain,241,144.2,0,0.740961941691169,neutral
  840. 5q loss,6p loss,186,111.3,0,0.740848976595492,neutral
  841. 16p gain,4p gain,78,46.7,0,0.740051450072598,neutral
  842. 11p gain,13q gain,83,49.7,0,0.739865368210007,neutral
  843. 15q loss,17p loss,871,522,0,0.738622900954807,neutral
  844. 17q loss,4p loss,183,109.7,0,0.738280070091245,neutral
  845. 10q loss,1p loss,375,224.8,0,0.738248534344722,neutral
  846. 16q gain,6q loss,198,118.7,0,0.73818044664717,neutral
  847. 15q loss,19q loss,806,483.4,0,0.737562353704443,neutral
  848. 1p gain,5q gain,182,109.2,0,0.736965541320238,neutral
  849. 2q gain,5q gain,139,83.4,0,0.736965524972206,neutral
  850. 11q gain,17p gain,72,43.2,0,0.736965460583357,neutral
  851. 10q gain,11q gain,67,40.2,0,0.736965450614489,neutral
  852. 11q loss,19p gain,47,28.2,0.000355318210459987,0.73696538952867,neutral
  853. 16q gain,4p gain,46,27.6,0.00039637106918239,0.736965385080029,neutral
  854. 21q gain,4p gain,24,14.4,0.0145755088852989,0.736965193417806,neutral
  855. ROS1,5q loss,12,20,0.261303237410072,-0.73696511326818,neutral
  856. MET,18q gain,8,4.8,0.153445962790698,0.736964391922343,neutral
  857. ROS1,1q loss,4,2.4,0.325486975929978,0.736963189682486,neutral
  858. 11p loss,19q loss,504,302.5,0,0.736488572270464,neutral
  859. 17q gain,20q gain,489,293.6,0,0.735982477361235,neutral
  860. 8p loss,9q loss,733,440.1,0,0.735981813527615,neutral
  861. 16p gain,3q loss,191,114.7,0,0.735707196661197,neutral
  862. 20q loss,8p loss,189,113.5,0,0.735693886153537,neutral
  863. 10q loss,6p loss,311,186.9,0,0.73464798047097,neutral
  864. 11p gain,12q gain,102,61.3,0,0.734610079258854,neutral
  865. 16q loss,17p loss,507,304.7,0,0.734596228311693,neutral
  866. 22q loss,3p loss,718,431.6,0,0.734288965888974,neutral
  867. 5q loss,6q loss,342,205.6,0,0.734156032593456,neutral
  868. 2q loss,8p loss,426,256.1,0,0.734146155048544,neutral
  869. 15q loss,9p loss,806,484.6,0,0.733985422092583,neutral
  870. 16p gain,8q loss,76,45.7,0,0.733805127413002,neutral
  871. 17p gain,6p loss,16,26.6,0.157069705882353,-0.733353981296163,neutral
  872. 15q gain,4q gain,61,36.7,2.27347498286498e-05,0.733029023009538,neutral
  873. 11q gain,7q gain,447,269,0,0.732668637269965,neutral
  874. 15q loss,16p loss,535,322,0,0.732478185335961,neutral
  875. mut_Negative,2q loss,106,176.1,0,-0.732330590202106,neutral
  876. 15q gain,3q gain,103,62,0,0.732304124171086,neutral
  877. 1p loss,9p loss,322,193.9,0,0.731747855295305,neutral
  878. 15q gain,17q gain,92,55.4,0,0.731747781295613,neutral
  879. 1q loss,3p gain,5,8.3,1,-0.731182094370753,neutral
  880. 18q loss,5p loss,66,39.8,0,0.729697449806163,neutral
  881. 22q loss,2q loss,438,264.2,0,0.729300381573781,neutral
  882. 14q gain,2p gain,209,126.1,0,0.728934621259693,neutral
  883. 8p gain,8q gain,109,65.8,0,0.728168559031836,neutral
  884. 15q loss,5p loss,80,48.3,0,0.727976692581226,neutral
  885. 19p loss,1q loss,77,46.5,0,0.727627606692885,neutral
  886. 3q gain,6p gain,350,211.4,0,0.727379518312069,neutral
  887. 19q gain,2q loss,98,59.2,0,0.727184476888927,neutral
  888. PIK3CA,17p gain,23,13.9,0.018188862911796,0.726548567569717,neutral
  889. 1p gain,4q gain,192,116.1,0,0.725738289620183,neutral
  890. 11p loss,6q loss,364,220.2,0,0.725123955638684,neutral
  891. 11q gain,6q gain,175,105.9,0,0.724652278935249,neutral
  892. 16q gain,17q gain,209,126.6,0,0.723225492611423,neutral
  893. 16p loss,18q gain,86,52.1,0,0.723053178157369,neutral
  894. 16q loss,2q loss,273,165.4,0,0.722941682257304,neutral
  895. KRAS,12q loss,60,99,0,-0.722465929748702,neutral
  896. BRAF,7q loss,8,13.2,0.674427493403694,-0.722465314053792,neutral
  897. 5q loss,9p loss,467,283.2,0,0.721601264464233,neutral
  898. mut_Negative,2p loss,78,128.6,0,-0.721344540802126,neutral
  899. 15q loss,18q loss,777,471.3,0,0.721268905236253,neutral
  900. 18q gain,4p loss,104,63.1,0,0.720871528130296,neutral
  901. 4p gain,9p loss,114,69.2,0,0.720189799485643,neutral
  902. 16q gain,20q gain,249,151.2,0,0.719687565257594,neutral
  903. 19q gain,6q loss,121,73.5,0,0.719190815384194,neutral
  904. ROS1,11p loss,13,21.4,0.232067148148148,-0.719098737764107,neutral
  905. 15q loss,8p loss,851,517.2,0,0.718436845821673,neutral
  906. 14q loss,17p loss,241,146.5,0,0.718132443193104,neutral
  907. 16q gain,6p gain,160,97.3,0,0.717560136889186,neutral
  908. 14q gain,16p gain,422,256.7,0,0.717159681004617,neutral
  909. 2p gain,8p gain,24,14.6,0.0150465522788204,0.71706564970436,neutral
  910. 10q loss,22q loss,861,523.9,0,0.716721764833584,neutral
  911. 22q loss,4p loss,597,363.7,0,0.714981990195125,neutral
  912. 17p loss,9q loss,729,444.2,0,0.714709408978873,neutral
  913. 12q loss,4p loss,374,227.9,0,0.714637320780573,neutral
  914. 19p loss,6q gain,369,224.9,0,0.714337130119079,neutral
  915. 11p loss,8p loss,531,323.7,0,0.714054478082849,neutral
  916. 1p gain,2p gain,123,75,0,0.713695739776308,neutral
  917. ROS1,7q loss,5,8.2,1,-0.713694688839286,neutral
  918. 12q loss,8p loss,495,302.2,0,0.711924846095117,neutral
  919. 10q gain,21q gain,8,13.1,0.689505220779221,-0.711494204575918,neutral
  920. 1q gain,6p gain,552,337.2,0,0.711063714074679,neutral
  921. 10q gain,13q gain,36,22,0.00300328143021915,0.710493127783258,neutral
  922. 2q gain,7p loss,18,11,0.0369404761904762,0.710492872761687,neutral
  923. 2p loss,3p gain,26,42.5,0.0335406145251397,-0.708951002571625,neutral
  924. 2q loss,7p loss,25,15.3,0.0108147264770241,0.708396076109709,neutral
  925. 3q gain,9q gain,123,75.3,0,0.707936471253995,neutral
  926. 10q gain,16q gain,41,25.1,0.00141445645645646,0.707936322652684,neutral
  927. 19q loss,4p loss,538,329.4,0,0.707765600735862,neutral
  928. 12q gain,20q gain,267,163.5,0,0.707549071984766,neutral
  929. 19p loss,1p loss,428,262.2,0,0.706943089751889,neutral
  930. 15q loss,6q loss,574,351.8,0,0.706295238216194,neutral
  931. 19p loss,21q loss,91,55.8,0,0.705601323247304,neutral
  932. 19q gain,1p gain,91,55.8,0,0.705601323247304,neutral
  933. 6q gain,7q gain,279,171.1,0,0.705425329617816,neutral
  934. 6q loss,9q loss,488,299.3,0,0.705288850313264,neutral
  935. 12q loss,18q loss,449,275.4,0,0.705186865239398,neutral
  936. 19q loss,21q loss,67,41.1,0,0.705022565970405,neutral
  937. 12q loss,4q loss,332,203.7,0,0.704737233898571,neutral
  938. 4q loss,8p loss,513,315,0,0.703606979542643,neutral
  939. 13q gain,22q gain,57,35,0.000150772727272727,0.703606838125622,neutral
  940. 21q loss,7q gain,69,42.4,0,0.702531965930331,neutral
  941. 16q loss,9p gain,128,78.7,0,0.701708198774672,neutral
  942. 13q loss,7p loss,46,28.3,6.61635638297872e-05,0.700831611955672,neutral
  943. 22q gain,7q loss,46,28.3,0.000853639705882353,0.700831611955672,neutral
  944. ALK,21q loss,4,6.5,1,-0.700438330937123,neutral
  945. 17p loss,3p loss,686,422.2,0,0.700281984572667,neutral
  946. 17q gain,4q loss,371,228.4,0,0.6998565118667,neutral
  947. 11p loss,19p loss,666,410.1,0,0.699546420114392,neutral
  948. 17p loss,19q loss,716,440.9,0,0.699508097963651,neutral
  949. 16q loss,8q loss,76,46.8,0,0.699490770307688,neutral
  950. 5q loss,8q loss,76,46.8,0,0.699490770307688,neutral
  951. 3q gain,7q gain,594,365.8,0,0.699407840787758,neutral
  952. 11q gain,9p gain,118,72.7,0,0.698759514146924,neutral
  953. 3q gain,4q gain,296,182.4,0,0.698491415996146,neutral
  954. 11q loss,19q gain,67,41.3,4.47638326585695e-05,0.698019179932501,neutral
  955. 11q gain,16q gain,169,104.2,0,0.697667915803195,neutral
  956. RET,14q loss,6,3.7,0.239798888888889,0.697435735298783,neutral
  957. 16q loss,4p loss,369,227.6,0,0.6971202343513,neutral
  958. 18q loss,21q loss,65,40.1,0,0.696837343639683,neutral
  959. 3p loss,8p loss,678,418.3,0,0.696747262168877,neutral
  960. BRAF,11p gain,10,16.2,0.537753180515759,-0.6959932609678,neutral
  961. 14q loss,15q loss,260,160.6,0,0.695039696055203,neutral
  962. 17p gain,5p loss,11,6.8,0.115272080152672,0.693896062205876,neutral
  963. 21q loss,8q loss,11,6.8,0.120481898192198,0.693896062205876,neutral
  964. 10q loss,17p loss,829,512.5,0,0.69382008635563,neutral
  965. ERBB2,1p gain,23,37.2,0.0594089552238806,-0.693668520726275,neutral
  966. 12q loss,6p loss,180,111.3,0,0.69354326440261,neutral
  967. 19q gain,8q loss,27,16.7,0.0136403345925526,0.693110975019189,neutral
  968. RET,3q gain,6,9.7,0.824954604316547,-0.693021329402586,neutral
  969. 19p gain,9q loss,43,69.5,0.000592321428571429,-0.692676190092979,neutral
  970. 10q loss,8p loss,820,507.7,0,0.691647638840738,neutral
  971. 19p loss,5q loss,618,382.9,0,0.690639163608041,neutral
  972. 4p gain,6q loss,81,50.2,0,0.690234434542281,neutral
  973. 16p gain,7q loss,126,78.1,0,0.690029210020836,neutral
  974. ROS1,8p gain,5,3.1,0.288706183340679,0.689658110927581,neutral
  975. 10q loss,9p loss,767,475.7,0,0.689174540909591,neutral
  976. 16q gain,3p gain,64,39.7,6.61635638297872e-05,0.688932759766278,neutral
  977. 10q loss,19p loss,1037,643.3,0,0.688852291839675,neutral
  978. 10q loss,7p loss,49,30.4,2.27347498286498e-05,0.688710245415855,neutral
  979. mut_Negative,12q loss,129,207.9,0,-0.688518650104632,neutral
  980. 5q loss,8p loss,487,302.2,0,0.688418093689261,neutral
  981. 11q gain,17q gain,326,202.3,0,0.688375617499973,neutral
  982. 22q gain,2q gain,68,42.2,4.47638326585695e-05,0.688291617720714,neutral
  983. 4p loss,7p loss,34,21.1,0.00206218181818182,0.688291488010962,neutral
  984. 17q loss,7q loss,62,38.5,0.000109040105193951,0.687409627658768,neutral
  985. 19p loss,4p loss,719,446.5,0,0.687331583072176,neutral
  986. 14q loss,7p loss,14,8.7,0.0766686782178218,0.686338893323119,neutral
  987. 16p loss,3p loss,419,260.4,0,0.686220774449907,neutral
  988. 22q gain,4q loss,116,72.1,0,0.686053565047983,neutral
  989. 17q gain,5p loss,51,31.7,0.000150772727272727,0.68601423449203,neutral
  990. BRAF,3q loss,12,19.3,0.400813054662379,-0.685565986924386,neutral
  991. 16q gain,3q loss,109,67.8,0,0.684970876098418,neutral
  992. 1p gain,9q gain,77,47.9,0,0.684832676020151,neutral
  993. BRAF,22q loss,32,51.4,0.00526144827586207,-0.683696284144327,neutral
  994. 11q gain,12q gain,181,112.7,0,0.683502133493276,neutral
  995. 11p loss,4p loss,392,244.1,0,0.683381336922239,neutral
  996. 14q gain,17p gain,101,62.9,0,0.683223284237691,neutral
  997. 17q loss,9q gain,18,28.9,0.175423455284553,-0.683072283876332,neutral
  998. 14q gain,1p gain,337,209.9,0,0.683046398854516,neutral
  999. 5p loss,8p loss,70,43.6,0,0.683026662261359,neutral
  1000. 1p gain,2q gain,153,95.3,0,0.682983476579291,neutral
  1001. 16q gain,2p gain,87,54.2,0,0.682722449029353,neutral
  1002. 3p loss,4p gain,106,66.1,0,0.681342005786724,neutral
  1003. TP53,ROS1,28,44.9,0.00343985185185185,-0.681288423860934,neutral
  1004. KRAS,11p gain,31,49.7,0.0210540119760479,-0.68097746118329,neutral
  1005. 11q gain,6p gain,249,155.4,0,0.680159203649776,neutral
  1006. 16q gain,7q loss,74,46.2,2.27347498286498e-05,0.679632301787411,neutral
  1007. 17p loss,19p loss,957,597.7,0,0.679097372885522,neutral
  1008. 13q loss,17p loss,764,477.2,0,0.678978583878823,neutral
  1009. 20q gain,8p gain,65,40.6,0,0.678959857340144,neutral
  1010. 10q loss,13q loss,822,513.7,0,0.678212309688732,neutral
  1011. 20q loss,7q loss,48,30,0.000930945698596705,0.678071724775806,neutral
  1012. KRAS,15q gain,40,25,0.00257370005790388,0.678071688708452,neutral
  1013. 17p gain,1p loss,20,32,0.121231946902655,-0.678071634607428,neutral
  1014. ERBB2,17p gain,7,11.2,0.907306009174312,-0.678071132241191,neutral
  1015. RET,9p loss,7,11.2,0.689505220779221,-0.678071132241191,neutral
  1016. ROS1,8q loss,3,4.8,1,-0.678070101748721,neutral
  1017. RET,7q loss,2,3.2,1,-0.678069200070425,neutral
  1018. 17p loss,5q loss,488,305.1,0,0.677598950149043,neutral
  1019. 19q gain,3q loss,67,41.9,6.61635638297872e-05,0.677210722654801,neutral
  1020. 8p loss,9p loss,700,437.9,0,0.676753459931205,neutral
  1021. 6p gain,6q gain,158,98.9,0,0.675882077741052,neutral
  1022. 21q loss,3q gain,57,35.7,4.47638326585695e-05,0.675037694011174,neutral
  1023. 13q loss,1p loss,334,209.4,0,0.673586634728458,neutral
  1024. 19p gain,5p loss,11,6.9,0.127616715500945,0.672834477425978,neutral
  1025. 20q loss,5q loss,117,73.4,0,0.672656488382373,neutral
  1026. 6p loss,6q gain,41,65.3,0.00397105633802817,-0.671458951097562,neutral
  1027. 16q gain,8q loss,43,27,0.00180677323860272,0.671377053717667,neutral
  1028. 13q loss,22q loss,777,487.9,0,0.671329104367067,neutral
  1029. 16p gain,2p gain,146,91.7,0,0.670974671659356,neutral
  1030. 19q loss,3q loss,270,169.6,0,0.670823205743579,neutral
  1031. 3p gain,7q gain,163,102.4,0,0.670656196739155,neutral
  1032. 18q loss,4p gain,107,67.3,0,0.668932307141752,neutral
  1033. 15q loss,4p loss,620,390,0,0.668794077801722,neutral
  1034. 18q loss,8p loss,677,425.9,0,0.668641091348108,neutral
  1035. 22q gain,8p gain,17,10.7,0.060883535,0.667923450067955,neutral
  1036. 3p gain,8p gain,17,10.7,0.0576775588972431,0.667923450067955,neutral
  1037. 10q loss,19q loss,754,474.6,0,0.66785241169784,neutral
  1038. 15q loss,19p loss,1041,655.3,0,0.667742623639586,neutral
  1039. 7p loss,7q gain,17,27,0.132245458515284,-0.667424346600635,neutral
  1040. 11q gain,14q gain,385,242.5,0,0.666873676487794,neutral
  1041. 17p loss,5p loss,70,44.1,0,0.66657614523239,neutral
  1042. 18q gain,5q gain,60,37.8,0.00017153199741435,0.666576125058658,neutral
  1043. 10q gain,21q loss,10,6.3,0.153445962790698,0.666575418978817,neutral
  1044. 12q loss,9p loss,449,283.2,0,0.664894160734184,neutral
  1045. 12q loss,7q gain,462,291.4,0,0.664891955956978,neutral
  1046. ALK,11q gain,65,41,6.61635638297872e-05,0.664815678486641,neutral
  1047. 4p loss,6q gain,212,133.8,0,0.663986109036014,neutral
  1048. 20q gain,2q gain,253,159.7,0,0.663773038856138,neutral
  1049. 10q gain,18q gain,19,12,0.0496963957597173,0.662964569790042,neutral
  1050. 7q gain,9p gain,186,117.5,0,0.662641819324728,neutral
  1051. 11p gain,20q gain,208,131.4,0,0.662618212272323,neutral
  1052. 1q loss,7q gain,56,35.4,4.47638326585695e-05,0.661677316945146,neutral
  1053. 19p gain,6p gain,65,41.1,6.61635638297872e-05,0.661301195166551,neutral
  1054. 14q gain,6p gain,358,226.4,0,0.661085605895202,neutral
  1055. 17q gain,8q loss,83,52.5,0,0.660793812700442,neutral
  1056. 19p gain,6p loss,43,27.2,0.00202683901292597,0.660729813447066,neutral
  1057. 17q loss,8p loss,230,145.5,0,0.660614671607666,neutral
  1058. 1q loss,8p loss,58,36.7,2.27347498286498e-05,0.660272692807362,neutral
  1059. 14q gain,7q gain,619,391.7,0,0.660190267626115,neutral
  1060. 16q gain,4q loss,186,117.7,0,0.660188255947282,neutral
  1061. 10q loss,4p loss,605,382.9,0,0.659967468367243,neutral
  1062. 5q gain,9p gain,87,55.1,0,0.658962986159833,neutral
  1063. 12q gain,8p gain,30,19,0.0101626457645765,0.65896280375022,neutral
  1064. 21q loss,3q loss,27,17.1,0.0155112787586945,0.658962772815267,neutral
  1065. RET,16p gain,12,7.6,0.0919500244021474,0.6589623861286,neutral
  1066. 1q loss,8q loss,9,5.7,0.172903214944649,0.658962154116821,neutral
  1067. RET,4p gain,3,1.9,0.414413636363636,0.658960298028575,neutral
  1068. 19p loss,2p loss,374,236.9,0,0.658760049210598,neutral
  1069. 2q loss,4q gain,78,123.1,0,-0.658284664970949,neutral
  1070. 11p gain,14q gain,208,131.8,0,0.658233117919815,neutral
  1071. 10q gain,17q gain,77,48.8,0,0.657977189748158,neutral
  1072. 21q loss,9p loss,65,41.2,2.27347498286498e-05,0.657795252517008,neutral
  1073. 11p loss,17p loss,515,326.7,0,0.656605961373749,neutral
  1074. 6q loss,8p loss,501,317.9,0,0.656237570358864,neutral
  1075. 12q loss,14q gain,414,262.7,0,0.656214547182794,neutral
  1076. 19p loss,3p loss,835,529.9,0,0.656056060257428,neutral
  1077. 17q loss,7q gain,221,140.3,0,0.655531323109918,neutral
  1078. BRAF,15q loss,35,55.1,0.00397105633802817,-0.654697246372412,neutral
  1079. 22q loss,5q loss,491,311.9,0,0.654639454955644,neutral
  1080. 19p gain,6q loss,79,50.2,0,0.654165184343885,neutral
  1081. 19q gain,5q loss,110,69.9,0,0.654139087796549,neutral
  1082. 12q gain,9q gain,59,37.5,0.000275357598978289,0.653824218671897,neutral
  1083. KRAS,6q gain,37,58.2,0.0118911320754717,-0.65349374036017,neutral
  1084. 4q loss,6p gain,276,175.5,0,0.653197206540324,neutral
  1085. 16p loss,2p loss,183,116.4,0,0.652752545156046,neutral
  1086. 13q gain,21q gain,47,29.9,0.00148967065868263,0.652515096816632,neutral
  1087. 17q gain,1q gain,690,439,0,0.652375410175584,neutral
  1088. 16q gain,5q gain,124,78.9,0,0.652242848756078,neutral
  1089. 13q loss,8p loss,743,472.8,0,0.652132164151733,neutral
  1090. 3p gain,6p gain,93,59.2,0,0.651633451796469,neutral
  1091. 17q gain,2q gain,210,133.7,0,0.65138982325451,neutral
  1092. 12q gain,2q gain,117,74.5,0,0.651196128778178,neutral
  1093. 6p loss,8p loss,270,172,0,0.650550811904265,neutral
  1094. 17q gain,1p gain,275,175.2,0,0.650428813814243,neutral
  1095. 11p gain,3q gain,193,123.1,0,0.648770043225029,neutral
  1096. 17q gain,4p gain,84,53.6,0,0.648156229798252,neutral
  1097. 11q loss,9p gain,73,46.6,4.47638326585695e-05,0.647566397151366,neutral
  1098. 4p loss,4q loss,372,237.5,0,0.647375085926792,neutral
  1099. 16p loss,17p loss,460,293.7,0,0.647290577748439,neutral
  1100. 19p loss,4q gain,446,284.8,0,0.647094545532265,neutral
  1101. KRAS,14q gain,85,133.1,0,-0.646975763549819,neutral
  1102. KRAS,3q loss,38,59.5,0.011336582278481,-0.646890112677553,neutral
  1103. 1p loss,8p loss,324,207,0,0.646363020217513,neutral
  1104. 10q loss,18q loss,724,462.7,0,0.645912587152076,neutral
  1105. 5p loss,6p gain,38,24.3,0.00348456371986223,0.645042890680166,neutral
  1106. 1q gain,3p gain,215,137.5,0,0.64490500335626,neutral
  1107. 16p gain,4q gain,222,142,0,0.644668710233447,neutral
  1108. 14q gain,2q loss,348,222.6,0,0.644633690039788,neutral
  1109. 13q loss,16q loss,477,305.4,0,0.643289187101679,neutral
  1110. 4p loss,9q loss,518,331.9,0,0.64220345287911,neutral
  1111. 16q loss,5p loss,44,28.2,0.0013172202166065,0.64180817741717,neutral
  1112. 19q gain,9p gain,44,28.2,0.00256042367962855,0.64180817741717,neutral
  1113. RET,12q loss,5,7.8,1,-0.641544993308168,neutral
  1114. 22q loss,7q loss,199,127.6,0,0.641140061099508,neutral
  1115. 1q gain,2p gain,293,187.9,0,0.640935570348356,neutral
  1116. 16q loss,4q loss,317,203.4,0,0.640163135751195,neutral
  1117. 10q loss,20q loss,192,123.3,0,0.638933469339152,neutral
  1118. 11q gain,7p loss,26,16.7,0.0163636305392419,0.638663211548016,neutral
  1119. 16p loss,8p loss,453,291,0,0.638491879408375,neutral
  1120. BRAF,8p loss,32,49.8,0.0127735403726708,-0.638073676036359,neutral
  1121. 17p loss,2q loss,402,258.4,0,0.637589411428452,neutral
  1122. 16q loss,18q gain,84,54,0,0.637429825198968,neutral
  1123. ALK,ROS1,7,4.5,0.247923157659669,0.637428775621318,neutral
  1124. 16q loss,8p loss,469,301.9,0,0.63551714886302,neutral
  1125. 16q loss,3q loss,182,117.2,0,0.634965836835926,neutral
  1126. 11q gain,1q loss,34,21.9,0.00616943417366947,0.634603642093829,neutral
  1127. 17p loss,4p loss,552,355.7,0,0.63400727818014,neutral
  1128. 9p loss,9q gain,56,86.9,0.000301545454545455,-0.633929258263174,neutral
  1129. 1p gain,8q loss,58,37.4,0.000375982367758186,0.633014493120515,neutral
  1130. 20q gain,4q loss,423,272.8,0,0.63281400020469,neutral
  1131. 11q gain,19q gain,100,64.5,0,0.632628854947335,neutral
  1132. 3p gain,8q gain,231,149,0,0.632580486583058,neutral
  1133. 17p loss,3q loss,284,183.2,0,0.632471398344494,neutral
  1134. BRAF,14q loss,10,15.5,0.689505220779221,-0.632267703575887,neutral
  1135. RET,1p gain,4,6.2,1,-0.632266935692028,neutral
  1136. 13q gain,4p loss,179,115.5,0,0.632066691537029,neutral
  1137. 14q loss,19p loss,285,183.9,0,0.632040411698433,neutral
  1138. 16p loss,2q loss,247,159.4,0,0.631859380382432,neutral
  1139. 14q gain,3p gain,143,92.3,0,0.631612538602759,neutral
  1140. 11p gain,5p loss,22,14.2,0.0370234237461617,0.631612233808236,neutral
  1141. 17p loss,18q loss,666,429.9,0,0.631521055078559,neutral
  1142. 5p gain,5q gain,472,304.7,0,0.631397342780243,neutral
  1143. KRAS,1p loss,105,67.8,0,0.631032074029799,neutral
  1144. 7q gain,8p gain,70,45.2,0,0.631032036336134,neutral
  1145. PIK3CA,5p loss,13,8.4,0.116039637577492,0.630049782521609,neutral
  1146. 6p gain,9q gain,80,51.7,2.27347498286498e-05,0.629835620745421,neutral
  1147. 18q gain,19q loss,121,78.2,0,0.62976646959775,neutral
  1148. KRAS,9q gain,47,30.4,0.00209617320070216,0.628589265507114,neutral
  1149. 13q gain,9q gain,47,30.4,0.00209617320070216,0.628589265507114,neutral
  1150. 17p loss,6q loss,496,320.9,0,0.628216315121248,neutral
  1151. 5q gain,7q gain,315,203.8,0,0.628197752118924,neutral
  1152. 14q gain,17q gain,455,294.7,0,0.626619467602304,neutral
  1153. 12q gain,4p gain,46,29.8,0.00226159090909091,0.626321359985765,neutral
  1154. 19p gain,4q gain,23,35.5,0.126278771929825,-0.626184942582004,neutral
  1155. 17p loss,8p loss,728,471.7,0,0.626068838788689,neutral
  1156. 20q loss,9p loss,164,106.3,0,0.62555417022436,neutral
  1157. 3q gain,7p loss,35,22.7,0.00380112314709236,0.624662401191602,neutral
  1158. 19q gain,20q loss,17,26.2,0.300467766323024,-0.624031767402713,neutral
  1159. 16p loss,6q gain,170,110.5,0,0.621488331050051,neutral
  1160. 12q gain,18q gain,52,33.8,0.00118321039903265,0.621488227354808,neutral
  1161. ROS1,1q gain,26,40,0.0245419653179191,-0.621488182537384,neutral
  1162. PIK3CA,19q gain,32,20.8,0.0136508683926645,0.621488133985182,neutral
  1163. ROS1,16p gain,30,19.5,0.0112557228587016,0.621488117801116,neutral
  1164. ROS1,16q loss,13,20,0.43772,-0.621487988328621,neutral
  1165. ROS1,6q gain,18,11.7,0.0642710129740519,0.621487945171135,neutral
  1166. RET,11p gain,6,3.9,0.274413043863536,0.62148708202269,neutral
  1167. 22q loss,9p loss,695,451.9,0,0.621009409660336,neutral
  1168. 22q loss,3q loss,288,187.3,0,0.620717885154312,neutral
  1169. 21q loss,8q gain,95,61.8,0,0.620320593730783,neutral
  1170. 17q loss,6q gain,85,55.3,2.27347498286498e-05,0.62018326963402,neutral
  1171. 22q gain,9p loss,154,100.2,0,0.620047792087015,neutral
  1172. 22q loss,8p loss,741,482.3,0,0.619542721988055,neutral
  1173. 11q loss,17p loss,277,180.3,0,0.6194865515707,neutral
  1174. 12q gain,14q loss,90,58.6,2.27347498286498e-05,0.619024250900557,neutral
  1175. 16p gain,9q gain,90,58.6,0,0.619024250900557,neutral
  1176. ERBB2,11q gain,28,43,0.0610004390243902,-0.618909652906793,neutral
  1177. 14q loss,4p loss,168,109.4,0,0.61884844887487,neutral
  1178. ALK,6q gain,17,26.1,0.30091551369863,-0.618514764544905,neutral
  1179. 1p gain,3q loss,144,93.8,0,0.618408930196017,neutral
  1180. 14q gain,5q gain,282,183.7,0,0.61834350879882,neutral
  1181. 19q loss,3p loss,600,390.9,0,0.61816290323186,neutral
  1182. 2q loss,6p gain,219,142.7,0,0.617945499789398,neutral
  1183. 8q loss,9p gain,29,18.9,0.0196419809322034,0.617666399944317,neutral
  1184. ERBB2,PIK3CA,9,13.8,0.81704215496368,-0.616670802885705,neutral
  1185. 4p loss,5q loss,349,227.9,0,0.614826089865822,neutral
  1186. 16p gain,17q gain,328,214.2,0,0.614737311387086,neutral
  1187. 20q gain,3q gain,503,328.6,0,0.614225904520333,neutral
  1188. 19q gain,1q gain,214,139.9,0,0.613214798416109,neutral
  1189. RET,3p loss,7,10.7,0.859934192037471,-0.612183256777229,neutral
  1190. 1q gain,2q gain,365,238.8,0,0.612093606501464,neutral
  1191. 19p gain,2p gain,35,22.9,0.0107480240831965,0.612007105936213,neutral
  1192. RET,11q gain,11,7.2,0.129891025035427,0.611434019880977,neutral
  1193. 12q gain,3q gain,234,153.2,0,0.611092200028751,neutral
  1194. 10q loss,21q loss,73,47.8,0,0.610885741597061,neutral
  1195. 15q gain,1q gain,151,98.9,0,0.610506073121933,neutral
  1196. mut_Negative,6q gain,80,122.1,0,-0.609991233032647,neutral
  1197. 21q gain,4q gain,67,43.9,0.000213724226804124,0.609940042505288,neutral
  1198. BRAF,6p loss,12,18.3,0.569662679558011,-0.608808828787888,neutral
  1199. 16q gain,21q gain,52,34.1,0.00154555555555556,0.608739738367947,neutral
  1200. 2p gain,5q gain,100,65.6,0,0.608232204390493,neutral
  1201. 17p gain,3p gain,25,16.4,0.0352324717368962,0.608231977430075,neutral
  1202. MET,13q loss,41,26.9,0.00104853495440729,0.608017552507859,neutral
  1203. 12q loss,13q loss,466,305.8,0,0.607741531962227,neutral
  1204. 4p loss,9p gain,140,91.9,0,0.60729000660763,neutral
  1205. 10q gain,1p gain,53,34.8,0.00106740133576199,0.606904911240938,neutral
  1206. 17p loss,9p loss,673,442,0,0.606560124015503,neutral
  1207. 20q gain,6q gain,234,153.7,0,0.606391332569283,neutral
  1208. 19q loss,8p loss,665,436.8,0,0.606381473021992,neutral
  1209. KRAS,22q gain,23,35,0.163802469135802,-0.605720845827901,neutral
  1210. 19p loss,8p loss,901,592.1,0,0.605686243924698,neutral
  1211. 14q gain,1q gain,800,526.1,0,0.604662940538537,neutral
  1212. 10q loss,6q loss,525,345.3,0,0.60446707428645,neutral
  1213. 14q gain,2p loss,247,162.5,0,0.604071293296335,neutral
  1214. 21q gain,2p gain,43,28.3,0.00498205533596838,0.60353443248187,neutral
  1215. 18q gain,21q loss,12,7.9,0.143152287184284,0.603109223481684,neutral
  1216. 18q gain,22q gain,29,19.1,0.0238921661409043,0.602480004122628,neutral
  1217. 2p gain,4p loss,166,109.4,0,0.60157045847767,neutral
  1218. 3q gain,4p loss,434,286.1,0,0.601175527824229,neutral
  1219. 19q loss,2q loss,363,239.3,0,0.601149130800146,neutral
  1220. 22q loss,4q loss,493,325,0,0.60114791333507,neutral
  1221. 12q gain,21q loss,27,17.8,0.0252558154168852,0.601081889913226,neutral
  1222. RET,4p loss,6,9.1,1,-0.600903225478741,neutral
  1223. 14q gain,2q gain,243,160.3,0,0.600181857709072,neutral
  1224. 10q gain,1q gain,132,87.1,0,0.599793249305406,neutral
  1225. 1q gain,8q loss,142,93.7,0,0.599769924361516,neutral
  1226. 16q gain,18q loss,241,159.1,0,0.599099279970636,neutral
  1227. 16q loss,7q loss,121,79.9,0,0.598739577902398,neutral
  1228. 10q loss,14q gain,668,441.4,0,0.597761461994505,neutral
  1229. 18q loss,22q loss,665,439.5,0,0.597491164113985,neutral
  1230. 14q gain,18q gain,110,72.7,0,0.597476187201545,neutral
  1231. 17p gain,4q gain,23,34.8,0.163946803278689,-0.597453232213257,neutral
  1232. 13q loss,4p gain,113,74.7,0,0.597142559053581,neutral
  1233. 18q gain,7q gain,122,80.7,0,0.596240508653547,neutral
  1234. 14q gain,21q gain,120,79.4,0,0.595823431877889,neutral
  1235. 19p loss,2q gain,353,233.6,0,0.595627888388868,neutral
  1236. 17q gain,21q gain,100,66.2,0,0.595096804194618,neutral
  1237. RET,1p loss,8,5.3,0.223108272440235,0.59400672162829,neutral
  1238. 10q gain,1q loss,8,5.3,0.233455462298025,0.59400672162829,neutral
  1239. 20q gain,7q gain,589,390.3,0,0.593684158809098,neutral
  1240. 14q loss,22q gain,22,33.2,0.207567653846154,-0.593679496598575,neutral
  1241. 11p gain,3p gain,52,34.5,0.00208041617819461,0.591915120631835,neutral
  1242. 20q gain,9p gain,159,105.5,0,0.591783720564366,neutral
  1243. 1p gain,7q gain,351,232.9,0,0.591760370138652,neutral
  1244. 22q loss,6q gain,276,183.2,0,0.591248737090419,neutral
  1245. BRAF,9p loss,31,46.7,0.0367559459459459,-0.591154177978244,neutral
  1246. 22q gain,8q loss,25,16.6,0.0378117671092952,0.590744561299927,neutral
  1247. ERBB2,16q loss,70,46.5,0.000150772727272727,0.590124101679247,neutral
  1248. 17q loss,6q loss,149,99,0,0.589811851480955,neutral
  1249. 2p loss,4p loss,212,141,0,0.588369067897263,neutral
  1250. 19p loss,9p loss,834,554.8,0,0.588079587303049,neutral
  1251. 12q loss,14q loss,141,93.8,0,0.58803528328414,neutral
  1252. 18q gain,6p gain,70,46.6,0.000213724226804124,0.587024863686148,neutral
  1253. 14q gain,16q gain,228,151.8,0,0.586862001873539,neutral
  1254. 16p gain,2q loss,243,161.8,0,0.586744676268003,neutral
  1255. 10q gain,3q gain,82,54.6,2.27347498286498e-05,0.586722870294166,neutral
  1256. 4p loss,8q loss,82,54.6,2.27347498286498e-05,0.586722870294166,neutral
  1257. 1q gain,22q gain,208,138.5,0,0.586697517286538,neutral
  1258. mut_Negative,15q loss,237,355.8,0,-0.586179431156252,neutral
  1259. 20q loss,5q gain,77,51.3,0.000130333988212181,0.585899526111114,neutral
  1260. 6p loss,7q gain,249,165.9,0,0.585831826977415,neutral
  1261. 13q loss,19q gain,164,109.3,0,0.585402369808698,neutral
  1262. 22q loss,6q loss,492,328,0,0.584962486059622,neutral
  1263. 17q gain,8p gain,51,34,0.00122184178743961,0.584962359280501,neutral
  1264. ERBB2,22q gain,11,16.5,0.741907889447236,-0.584962063541172,neutral
  1265. ROS1,21q gain,9,6,0.219698765822785,0.584961699225025,neutral
  1266. 15q gain,1q loss,4,6,1,-0.584961298477794,neutral
  1267. BRAF,7p loss,2,3,1,-0.58496009623944,neutral
  1268. 1p loss,4p loss,234,156.1,0,0.584037961725287,neutral
  1269. 1q gain,9q gain,180,120.1,0,0.583760715536647,neutral
  1270. 1p loss,4p gain,49,32.7,0.00285518775274408,0.583490966740941,neutral
  1271. EGFR L858R,1p gain,236,157.5,0,0.583435000506025,neutral
  1272. 11q loss,19p loss,339,226.3,0,0.583048667562752,neutral
  1273. 13q loss,16p loss,441,294.4,0,0.583000968097457,neutral
  1274. 16p gain,18q loss,403,269.1,0,0.582637429961941,neutral
  1275. 12q loss,9p gain,118,78.8,0,0.582519263971998,neutral
  1276. 19q loss,2q gain,258,172.3,0,0.582448336272507,neutral
  1277. 18q gain,6q loss,38,56.9,0.0245915517241379,-0.582429107868288,neutral
  1278. 4p gain,5q gain,50,33.4,0.00256042367962855,0.582079848782456,neutral
  1279. 14q gain,4p gain,96,64.2,0,0.580461034048105,neutral
  1280. 17q gain,3q gain,411,275.1,0,0.579182236912336,neutral
  1281. 19q gain,3q gain,131,87.7,0,0.578918009606052,neutral
  1282. 22q gain,7q gain,154,103.1,0,0.578885971964031,neutral
  1283. 10q gain,6p gain,56,37.5,0.00118321039903265,0.578536104467189,neutral
  1284. 14q gain,3q gain,492,329.8,0,0.577066902367662,neutral
  1285. BRAF,22q gain,17,11.4,0.0959531974769529,0.576500505095442,neutral
  1286. 2p gain,5p gain,312,209.3,0,0.575973694804599,neutral
  1287. RET,2q gain,7,4.7,0.272196901595745,0.574693156698121,neutral
  1288. 1q gain,20q gain,780,524.2,0,0.573356761282802,neutral
  1289. 17p loss,4q loss,473,317.9,0,0.573267152207695,neutral
  1290. mut_Negative,3q loss,84,124.9,0,-0.57231218770044,neutral
  1291. 11p gain,1q gain,292,196.4,0,0.572173415403074,neutral
  1292. 19q loss,5q loss,420,282.5,0,0.572138443644604,neutral
  1293. 19p loss,6p loss,324,218,0,0.571665656456652,neutral
  1294. 11q gain,16p gain,262,176.3,0,0.571534310337505,neutral
  1295. 22q loss,8q loss,111,74.7,0,0.571379465288898,neutral
  1296. KRAS,10q loss,112,166.4,0,-0.571156659084495,neutral
  1297. ERBB2,10q gain,7,10.4,1,-0.571156027410786,neutral
  1298. MET,7q gain,38,25.6,0.00370243274184316,0.569855424434847,neutral
  1299. 4p gain,6p gain,61,41.1,0.000853639705882353,0.569670734255281,neutral
  1300. 15q loss,7p loss,46,31,0.000774238329238329,0.569365493914038,neutral
  1301. 17p gain,1q gain,139,93.7,0,0.568963879773109,neutral
  1302. ALK,12q loss,30,44.5,0.0846992093023256,-0.568842678660709,neutral
  1303. 2p gain,8q gain,302,203.6,0,0.568810965048821,neutral
  1304. 16q loss,18q loss,408,275.1,0,0.568612995460253,neutral
  1305. 19q loss,9p loss,607,409.3,0,0.568537838219725,neutral
  1306. 20q gain,9q gain,119,80.3,0,0.567489622249732,neutral
  1307. 11q gain,8q gain,580,391.4,0,0.567409132289683,neutral
  1308. 18q gain,19p loss,157,106,0,0.566700250116529,neutral
  1309. 12q gain,9p loss,262,176.9,0,0.566632737244781,neutral
  1310. 11q loss,4q gain,58,85.9,0.00343985185185185,-0.566605150333545,neutral
  1311. ALK,16q loss,30,44.4,0.0861498611111111,-0.565597019887237,neutral
  1312. 1p gain,3q gain,290,196,0,0.565199222040942,neutral
  1313. ALK,1p gain,24,35.5,0.192015976095618,-0.56478442405363,neutral
  1314. 19p loss,3q loss,340,229.9,0,0.564528259985936,neutral
  1315. 2q gain,7q loss,33,48.8,0.0769228095238095,-0.564414981771021,neutral
  1316. ALK,16q gain,38,25.7,0.0121731378935939,0.564230877433781,neutral
  1317. 21q loss,9p gain,17,11.5,0.0991254202898551,0.563900479320337,neutral
  1318. 16p loss,3q loss,167,113,0,0.563525288775665,neutral
  1319. 2q gain,4p gain,43,29.1,0.00766169905607995,0.563317346420206,neutral
  1320. 13q gain,6p gain,126,85.3,0,0.562806032436708,neutral
  1321. 10q gain,1p loss,44,29.8,0.00647808058198097,0.562191036821926,neutral
  1322. 15q gain,21q gain,22,14.9,0.0652651994017946,0.562190880581442,neutral
  1323. 18q gain,20q gain,107,72.5,0,0.561557832225113,neutral
  1324. MET,22q gain,9,6.1,0.223306780883679,0.561114996688489,neutral
  1325. 16q gain,2q loss,141,95.6,0,0.560612590714686,neutral
  1326. 12q loss,13q gain,146,99,0,0.560467891888369,neutral
  1327. ALK,6q loss,69,46.8,0.000295031766200762,0.560087732900211,neutral
  1328. 3p loss,4p loss,465,315.4,0,0.560048041376188,neutral
  1329. 19p gain,9p loss,102,69.2,0,0.559725142180889,neutral
  1330. 11q loss,19q loss,246,166.9,0,0.559674333069459,neutral
  1331. KRAS,14q loss,70,47.5,0.000597472049689441,0.559427310988056,neutral
  1332. 6q loss,7p loss,28,19,0.02503856167979,0.559427164549176,neutral
  1333. 18q gain,8q gain,173,117.4,0,0.559339589919673,neutral
  1334. 21q gain,6p gain,75,50.9,0.000234191270860077,0.559224848229762,neutral
  1335. 18q gain,7q loss,15,22.1,0.539577897727273,-0.559083559902216,neutral
  1336. 16p loss,3q gain,348,236.2,0,0.559078321716305,neutral
  1337. ALK,6p gain,26,38.3,0.160736291666667,-0.55883259069663,neutral
  1338. 4p loss,6p loss,191,129.7,0,0.558394122971952,neutral
  1339. 13q loss,19p gain,110,74.7,0,0.55832331364502,neutral
  1340. MET,3q loss,7,10.3,1,-0.557216849920926,neutral
  1341. 14q gain,3p loss,535,363.6,0,0.557186679269946,neutral
  1342. ALK,9q gain,20,13.6,0.0828678947368421,0.556393009066938,neutral
  1343. 5p loss,8q loss,10,6.8,0.204987887323944,0.556392669609911,neutral
  1344. 14q gain,15q loss,661,449.6,0,0.556008225911661,neutral
  1345. 16q loss,3q gain,360,245,0,0.555215138516455,neutral
  1346. 19q gain,3p gain,36,24.5,0.0183632218683652,0.555214969220673,neutral
  1347. 14q gain,8p loss,597,406.3,0,0.555185555578703,neutral
  1348. 13q loss,19p loss,880,599,0,0.554947513045077,neutral
  1349. 14q gain,4p loss,450,306.4,0,0.554508689153986,neutral
  1350. 14q loss,8p loss,213,145.1,0,0.553805879350981,neutral
  1351. 19p gain,5q gain,49,33.4,0.00443770975056689,0.552933509011489,neutral
  1352. 17p gain,20q loss,12,17.6,0.752292307692308,-0.552540640496271,neutral
  1353. MET,8p loss,39,26.6,0.00373399428571429,0.552047705803724,neutral
  1354. 19p gain,1p gain,56,38.2,0.00200971176470588,0.5518540688645,neutral
  1355. 6p gain,7q loss,101,68.9,2.27347498286498e-05,0.551779338386266,neutral
  1356. 4p gain,4q loss,73,49.8,0.000234191270860077,0.551750629630973,neutral
  1357. 16p loss,7q gain,411,280.6,0,0.550623368636567,neutral
  1358. 19p gain,1q gain,140,95.6,0,0.550344255991707,neutral
  1359. 4p loss,8p loss,516,352.4,0,0.550157128410277,neutral
  1360. 22q loss,9p gain,184,125.7,0,0.549721080158334,neutral
  1361. 14q gain,9p gain,155,105.9,0,0.54956558301454,neutral
  1362. MET,14q loss,12,8.2,0.175425317679558,0.549338033852678,neutral
  1363. EGFR L858R,10q gain,30,43.9,0.105635990990991,-0.549258286773301,neutral
  1364. 17q gain,7q gain,478,326.8,0,0.548602620758217,neutral
  1365. MET,15q loss,43,29.4,0.00173026674570243,0.548520349551016,neutral
  1366. 18q loss,19p loss,789,539.6,0,0.548134943501282,neutral
  1367. 1q gain,5q gain,400,273.6,0,0.547931753113484,neutral
  1368. 17q gain,5q gain,224,153.3,0,0.547141005582954,neutral
  1369. 17p gain,2q loss,58,39.7,0.00171161921708185,0.54691377821327,neutral
  1370. 2q gain,6p gain,150,102.7,0,0.546526274768086,neutral
  1371. RET,12q gain,7,4.8,0.293728886933568,0.544319571603716,neutral
  1372. 16p gain,20q gain,373,255.8,0,0.544159348539778,neutral
  1373. 16p loss,9p loss,397,272.6,0,0.542353428641521,neutral
  1374. ROS1,4p loss,16,23.3,0.444086552795031,-0.542257767265087,neutral
  1375. 14q gain,9q loss,557,382.6,0,0.54184044207479,neutral
  1376. 10q loss,5p loss,69,47.4,8.76354029062087e-05,0.541709207487485,neutral
  1377. 1p gain,7q loss,93,63.9,6.61635638297872e-05,0.541414714403036,neutral
  1378. 20q gain,5q loss,381,261.8,0,0.541325883194693,neutral
  1379. 13q loss,19q loss,643,441.9,0,0.541098796247696,neutral
  1380. 19p loss,7q loss,228,156.7,0,0.541028615788295,neutral
  1381. ROS1,1p gain,11,16,0.810249708737864,-0.540567971506471,neutral
  1382. 15q loss,7q gain,725,498.7,0,0.539808783094671,neutral
  1383. 14q gain,4q loss,398,273.8,0,0.539645967730166,neutral
  1384. 6p gain,7q gain,365,251.1,0,0.539634417454134,neutral
  1385. 16p gain,9p loss,402,276.7,0,0.538872841204951,neutral
  1386. 14q loss,19q loss,197,135.6,0,0.538838418047208,neutral
  1387. 21q gain,5q gain,60,41.3,0.00197533608490566,0.538820610204798,neutral
  1388. 11p gain,21q gain,43,29.6,0.0110627019650655,0.538739332074055,neutral
  1389. EGFR L858R,1p loss,93,135,0,-0.537656737680604,neutral
  1390. 16p gain,1q gain,555,382.4,0,0.537405236411207,neutral
  1391. 20q loss,4q loss,111,76.5,0,0.5370279650424,neutral
  1392. 16q loss,6p gain,244,168.2,0,0.536703415549357,neutral
  1393. 12q gain,16p gain,173,119.3,0,0.536177957291627,neutral
  1394. MET,13q gain,6,8.7,1,-0.536052154019687,neutral
  1395. ROS1,21q loss,2,2.9,1,-0.536050661584948,neutral
  1396. 17q gain,7q loss,130,89.7,0,0.535331683137534,neutral
  1397. ALK,8p gain,10,6.9,0.224043244704822,0.535331084830012,neutral
  1398. 4q gain,8q gain,457,315.4,0,0.535011490981984,neutral
  1399. 17p loss,7p loss,41,28.3,0.00383675783475784,0.534821698764217,neutral
  1400. 14q gain,19p gain,93,64.2,2.27347498286498e-05,0.534657349282745,neutral
  1401. ALK,17q loss,31,21.4,0.0332557549120993,0.534657210102109,neutral
  1402. 1p gain,7p gain,582,401.8,0,0.534541577945129,neutral
  1403. 3p gain,4p loss,116,80.1,0,0.534250601864752,neutral
  1404. ALK,TP53,69,99.9,0,-0.533888251454575,neutral
  1405. 17q loss,22q gain,23,33.3,0.300257604166667,-0.533888122109999,neutral
  1406. 18q loss,4p loss,465,321.2,0,0.533758809475356,neutral
  1407. 11q loss,4p loss,195,134.7,0,0.533724240054724,neutral
  1408. 11q loss,6p gain,144,99.5,0,0.533300336091346,neutral
  1409. KRAS,7q loss,28,40.5,0.18933436,-0.532494921799838,neutral
  1410. 16q gain,1q gain,327,226.1,0,0.532329623945201,neutral
  1411. 12q gain,1p gain,141,97.5,0,0.532220992999262,neutral
  1412. 7p gain,7q gain,1084,749.8,0,0.531787020021074,neutral
  1413. 13q loss,1p gain,353,244.3,0,0.531014301706596,neutral
  1414. 3q gain,8q gain,769,532.3,0,0.530744023581323,neutral
  1415. BRAF,9p gain,9,13,1,-0.53051422347017,neutral
  1416. 1q loss,4p loss,40,27.7,0.0087463184079602,0.530113863570811,neutral
  1417. 13q loss,16q gain,255,176.6,0,0.530011878981221,neutral
  1418. 1q loss,7q loss,14,9.7,0.156636967022759,0.52936971794022,neutral
  1419. mut_Negative,22q gain,51,73.6,0.0139232098765432,-0.529208432335137,neutral
  1420. 11p gain,9p gain,57,39.5,0.00361370412844037,0.529109153852805,neutral
  1421. 12q loss,6p gain,243,168.4,0,0.529064149126188,neutral
  1422. 20q gain,2q loss,320,221.8,0,0.528812519652373,neutral
  1423. 17p loss,7q loss,180,124.8,0,0.528378936903952,neutral
  1424. 12q gain,5q gain,123,85.3,0,0.528040617068705,neutral
  1425. 2q gain,8q gain,373,258.7,0,0.527895559368905,neutral
  1426. 16p loss,7q loss,111,77,2.27347498286498e-05,0.527629268264745,neutral
  1427. mut_Negative,16p gain,141,203.2,0,-0.527205208165986,neutral
  1428. 19q loss,7q gain,607,421.2,0,0.527191069632937,neutral
  1429. 11p gain,6q gain,83,57.6,0.000315904761904762,0.527042448142776,neutral
  1430. EGFR L858R,8q loss,68,47.2,0.000794125230202578,0.526747793281184,neutral
  1431. 11q loss,9q gain,51,35.4,0.00612054402692092,0.526747762116299,neutral
  1432. 20q gain,7p loss,35,24.3,0.0118696568627451,0.526398426723532,neutral
  1433. BRAF,13q loss,35,50.4,0.0502679381443299,-0.526068685718051,neutral
  1434. 1q loss,21q gain,5,7.2,1,-0.526067930022112,neutral
  1435. 6p gain,8q loss,58,40.3,0.00257370005790388,0.525272952238671,neutral
  1436. 12q gain,6p loss,100,69.5,6.61635638297872e-05,0.524915053738709,neutral
  1437. 1q gain,9p gain,227,157.8,0,0.524595064294127,neutral
  1438. KRAS,18q loss,97,139.5,0,-0.524208424329616,neutral
  1439. 5p loss,8q gain,88,61.2,0,0.523971799040152,neutral
  1440. 19p loss,3q gain,691,480.6,0,0.523849053005497,neutral
  1441. 17q loss,19p gain,16,23,0.588881095890411,-0.523561681631471,neutral
  1442. 16p loss,6p gain,233,162.1,0,0.523445836942034,neutral
  1443. 1q loss,8q gain,74,51.5,0,0.522952753269575,neutral
  1444. 18q gain,22q loss,124,86.3,0,0.522907605269583,neutral
  1445. KRAS,3p gain,50,34.8,0.00719639152258784,0.522840662784857,neutral
  1446. 21q loss,2q gain,25,17.4,0.0569579137412237,0.522840536756417,neutral
  1447. 10q loss,6q gain,277,192.8,0,0.522780901960862,neutral
  1448. 2q gain,5p gain,382,265.9,0,0.522688844575277,neutral
  1449. 19p loss,2q loss,466,324.4,0,0.522556121810771,neutral
  1450. 4q gain,9q gain,64,44.6,0.00184277777777778,0.521028096913952,neutral
  1451. 13q loss,17q gain,492,342.9,0,0.520870398540692,neutral
  1452. 10q loss,20q gain,631,439.8,0,0.520792391075139,neutral
  1453. 2q loss,4p loss,277,193.1,0,0.520537789356427,neutral
  1454. 3q gain,5q gain,246,171.5,0,0.520449713690409,neutral
  1455. 3q loss,9p gain,33,47.3,0.132392813852814,-0.51937402692282,neutral
  1456. PIK3CA,10q gain,9,12.9,1,-0.519373674467795,neutral
  1457. 17q gain,18q gain,87,60.7,0.000109040105193951,0.519318812631151,neutral
  1458. PIK3CA,3q loss,50,34.9,0.00722935897435898,0.518700933611805,neutral
  1459. 11q loss,21q gain,50,34.9,0.00724381058495822,0.518700933611805,neutral
  1460. 13q gain,19q loss,205,143.1,0,0.518600207224247,neutral
  1461. 16q loss,7q gain,417,291.1,0,0.518532529246146,neutral
  1462. TP53,12q loss,629,439.1,0,0.51851047272071,neutral
  1463. 17p gain,3q gain,84,58.7,0.000130333988212181,0.517028750531208,neutral
  1464. 1q gain,8p gain,87,60.8,0,0.516944005834163,neutral
  1465. 12q gain,4q loss,182,127.2,0,0.516839745651242,neutral
  1466. 1q gain,7q gain,835,583.6,0,0.516796306888057,neutral
  1467. 17q loss,8q gain,292,204.1,0,0.51669216545633,neutral
  1468. EGFR 19del,2p loss,209,146.2,0,0.515559601364729,neutral
  1469. 13q gain,7q gain,211,147.6,0,0.515550248164759,neutral
  1470. 12q gain,13q loss,273,191,0,0.515328290196305,neutral
  1471. 18q loss,19q loss,569,398.1,0,0.515297770218003,neutral
  1472. 1p gain,2q loss,189,132.3,0,0.514573140115587,neutral
  1473. 17q loss,2q gain,82,57.4,0.00047681875,0.51457309742759,neutral
  1474. 19p loss,5p loss,79,55.3,2.27347498286498e-05,0.514573094564217,neutral
  1475. 20q gain,5p loss,54,37.8,0.00213000583771162,0.514573058330178,neutral
  1476. 10q gain,9p gain,25,17.5,0.0679894281452014,0.514572925510728,neutral
  1477. 19p gain,3p gain,24,16.8,0.0719642637580565,0.514572915205774,neutral
  1478. 2p loss,7p loss,16,11.2,0.132038504716981,0.51457278639388,neutral
  1479. ALK,19p loss,61,87.1,0.00138208333333333,-0.513863405277871,neutral
  1480. 22q loss,3q gain,559,391.5,0,0.5138359645102,neutral
  1481. 14q gain,4q gain,279,195.4,0,0.513834632624756,neutral
  1482. 15q gain,8q gain,153,107.2,0,0.513226706836277,neutral
  1483. 1q gain,3q gain,701,491.2,0,0.513103874737507,neutral
  1484. 20q gain,3p loss,517,362.3,0,0.512979462833683,neutral
  1485. 11q loss,1q gain,330,231.3,0,0.512700739841693,neutral
  1486. 17q gain,6q loss,329,230.6,0,0.512695052259081,neutral
  1487. ALK,16p loss,30,42.8,0.162012148760331,-0.512648152085241,neutral
  1488. 13q loss,7q gain,650,455.9,0,0.511722299488734,neutral
  1489. 17q gain,9p gain,126,88.4,0,0.511305410294662,neutral
  1490. 14q gain,16q loss,374,262.4,0,0.511270533750894,neutral
  1491. 20q gain,3q loss,224,157.2,0,0.510897487317897,neutral
  1492. 7p loss,8q gain,56,39.3,0.000150772727272727,0.510897405212523,neutral
  1493. 11p gain,6q loss,147,103.2,0,0.510373142646965,neutral
  1494. mut_Negative,8p gain,46,32.3,0.00734649972175849,0.510099563225031,neutral
  1495. 14q gain,7q loss,153,107.5,0,0.509194953192798,neutral
  1496. 12q gain,8q gain,377,264.9,0,0.509116663592304,neutral
  1497. 17q gain,9p loss,452,317.6,0,0.509111846652718,neutral
  1498. 1q gain,6q gain,327,229.8,0,0.508911819077984,neutral
  1499. 19q loss,5q gain,281,197.5,0,0.508717455450072,neutral
  1500. 17p loss,8q loss,104,73.1,0,0.508640158437598,neutral
  1501. mut_Negative,8p loss,226,321.5,0,-0.50849594595057,neutral
  1502. 22q gain,7p gain,253,177.9,0,0.50807085024219,neutral
  1503. 18q gain,1q gain,154,108.3,0,0.507897068442597,neutral
  1504. ERBB2,16p gain,32,45.5,0.14061811965812,-0.507794506432365,neutral
  1505. 17q gain,2q loss,264,185.7,0,0.50756409126838,neutral
  1506. 19p loss,7q gain,811,570.9,0,0.506463844628007,neutral
  1507. 10q loss,14q loss,224,157.7,0,0.506316045076971,neutral
  1508. EGFR L858R,22q gain,99,69.7,6.61635638297872e-05,0.506269807838952,neutral
  1509. 12q loss,6q loss,292,205.6,0,0.506128083810874,neutral
  1510. ALK,14q loss,15,21.3,0.687799921465969,-0.505890645255041,neutral
  1511. 14q gain,3q loss,224,157.8,0,0.505401499911997,neutral
  1512. 11q gain,5p gain,571,402.3,0,0.505218997029514,neutral
  1513. 20q gain,7q loss,152,107.1,0,0.505112803789423,neutral
  1514. 11p gain,7p gain,358,252.3,0,0.504819364292333,neutral
  1515. 7q gain,8q gain,897,632.3,0,0.504498758899562,neutral
  1516. 12q loss,17p gain,33,46.8,0.132392813852814,-0.504042376425478,neutral
  1517. 6q gain,8q loss,39,27.5,0.0216295677385345,0.504042350643064,neutral
  1518. ALK,21q gain,19,13.4,0.118173063363506,0.503766100548466,neutral
  1519. ERBB2,17q gain,74,52.2,0.000637489150650961,0.50347538252687,neutral
  1520. 10q gain,3q loss,37,26.1,0.026022489539749,0.503475301107339,neutral
  1521. 22q loss,7q gain,659,465,0,0.503047739879144,neutral
  1522. 11p loss,19q gain,106,74.8,4.47638326585695e-05,0.502954032792569,neutral
  1523. 3q gain,5p gain,775,547,0,0.502655469609783,neutral
  1524. 6q gain,7p loss,15,10.6,0.156887632311978,0.50089783669664,neutral
  1525. 16q gain,7p gain,411,290.5,0,0.500600215716744,neutral
  1526. 17q loss,4q gain,99,70,0.000130333988212181,0.500073542762131,neutral
  1527. 6p gain,9p gain,96,67.9,0.000150772727272727,0.499622769171031,neutral
  1528. 7p gain,9q gain,218,154.3,0,0.498590045772872,neutral
  1529. KRAS,5q gain,49,69.2,0.0381633333333333,-0.497990202688552,neutral
  1530. 18q loss,7p loss,36,25.5,0.0148668545356951,0.497499494456734,neutral
  1531. 7q gain,9q loss,599,424.3,0,0.497471314468703,neutral
  1532. 17q gain,18q loss,436,308.9,0,0.497188250421713,neutral
  1533. 10q gain,6p loss,35,24.8,0.0319484906639004,0.497014631912224,neutral
  1534. 3p gain,5p gain,216,153.1,0,0.496557002110278,neutral
  1535. ROS1,20q gain,19,26.8,0.413533197492163,-0.49623336113279,neutral
  1536. 10q gain,19q gain,22,15.6,0.0931826812652068,0.495957225628518,neutral
  1537. 16q loss,22q gain,49,69.1,0.0346442222222222,-0.495903875741796,neutral
  1538. 10q gain,8q gain,133,94.4,0,0.494567436672161,neutral
  1539. 16p gain,6q loss,283,200.9,0,0.494324468152977,neutral
  1540. PIK3CA,22q gain,29,20.6,0.0553055577889447,0.49340835997545,neutral
  1541. 13q loss,4p loss,502,356.6,0,0.493380649495129,neutral
  1542. 20q loss,7q gain,154,109.4,0,0.493317574597802,neutral
  1543. 1p loss,9p gain,76,54,0.00118321039903265,0.493039933942676,neutral
  1544. 5q loss,6p gain,237,168.4,0,0.492994895921708,neutral
  1545. 14q gain,17q loss,178,126.5,0,0.492739823275334,neutral
  1546. 17q gain,8p loss,477,339,0,0.492703980556971,neutral
  1547. 18q loss,22q gain,137,97.4,0,0.492182172951117,neutral
  1548. 19q gain,3p loss,136,96.7,0,0.492018813548513,neutral
  1549. 10q gain,6q gain,36,25.6,0.0305508623376623,0.491852933525601,neutral
  1550. 22q gain,7p loss,9,6.4,0.27489380425155,0.491852445114034,neutral
  1551. 11q gain,4p gain,62,44.1,0.00298587420657819,0.491489465267751,neutral
  1552. 14q gain,19q gain,132,93.9,0,0.49134082224548,neutral
  1553. 11p loss,17q gain,330,234.8,0,0.491033598297587,neutral
  1554. 20q gain,4p loss,429,305.3,0,0.490750044554387,neutral
  1555. 16p gain,7p gain,690,491.4,0,0.48969849574048,neutral
  1556. 14q gain,19q loss,533,379.7,0,0.489275523099243,neutral
  1557. 11q gain,1q gain,507,361.2,0,0.489187842923645,neutral
  1558. TP53,5q loss,616,439.1,0,0.488380807020368,neutral
  1559. 4p loss,9p loss,463,330.2,0,0.487672060702509,neutral
  1560. 13q loss,20q gain,574,409.5,0,0.487187274938091,neutral
  1561. 6p gain,8p loss,365,260.4,0,0.487166999611963,neutral
  1562. 11q gain,19q loss,365,260.7,0,0.485505865305797,neutral
  1563. 18q gain,6p loss,22,30.8,0.453186408668731,-0.485426639807322,neutral
  1564. 19p gain,6q gain,20,28,0.517079082840237,-0.485426621071039,neutral
  1565. ROS1,6q loss,15,21,0.672927553191489,-0.485426552371343,neutral
  1566. ROS1,11p gain,14,10,0.184704205693297,0.485426414972012,neutral
  1567. 1q loss,22q gain,6,8.4,1,-0.485426140173585,neutral
  1568. ROS1,3p gain,5,7,1,-0.485426002774489,neutral
  1569. MET,19p gain,3,4.2,1,-0.48542545317889,neutral
  1570. BRAF,MET,2,2.8,1,-0.485424766186159,neutral
  1571. 20q gain,8q gain,795,568,0,0.485063923414583,neutral
  1572. 16p gain,2q gain,163,116.5,0,0.484541974249214,neutral
  1573. 19p loss,9q gain,84,117.5,0.000301545454545455,-0.484199474819391,neutral
  1574. 1p gain,8q gain,474,338.9,0,0.484027410168298,neutral
  1575. 17p gain,2q gain,40,28.6,0.0241980724789916,0.483984709231313,neutral
  1576. 8q gain,9p gain,239,171,0,0.48301426909053,neutral
  1577. 20q gain,9p loss,530,379.3,0,0.482652977228623,neutral
  1578. 21q gain,2p loss,51,36.5,0.0110627019650655,0.48260067071397,neutral
  1579. BRAF,17p loss,36,50.3,0.0846992093023256,-0.482561379545356,neutral
  1580. 17p loss,4q gain,317,226.9,0,0.48242621328246,neutral
  1581. BRAF,14q gain,31,43.3,0.16199622406639,-0.482098677252949,neutral
  1582. 20q gain,8p loss,565,404.8,0,0.481041567390328,neutral
  1583. 1p gain,8p loss,337,241.5,0,0.480725385417102,neutral
  1584. 4p loss,6p gain,274,196.4,0,0.480380942729323,neutral
  1585. 2p gain,2q loss,57,79.5,0.024441052631579,-0.479992869486306,neutral
  1586. 1p loss,8q gain,405,290.4,0,0.479880440606118,neutral
  1587. 11q gain,21q gain,76,54.5,0.00124112251056126,0.479743113780279,neutral
  1588. 22q loss,5q gain,304,218.1,0,0.479081534998943,neutral
  1589. TP53,21q loss,89,63.9,0,0.477989341233469,neutral
  1590. 5p gain,7q gain,905,649.8,0,0.477922042267689,neutral
  1591. 10q loss,6p gain,394,282.9,0,0.477903438567468,neutral
  1592. BRAF,4p loss,27,37.6,0.261436666666667,-0.477773103990848,neutral
  1593. 11p gain,3q loss,82,58.9,0.00110566666666667,0.47735620667368,neutral
  1594. 20q loss,4q gain,76,54.6,0.00160308472553699,0.477098393009541,neutral
  1595. 12q loss,2q gain,166,119.3,0,0.47658916451839,neutral
  1596. 16p loss,18q loss,369,265.2,0,0.476540025532332,neutral
  1597. ROS1,16q gain,16,11.5,0.162396390559926,0.476437691110225,neutral
  1598. 5p gain,6q gain,356,255.9,0,0.476297077962158,neutral
  1599. 21q gain,8p loss,127,91.3,0,0.476141687256364,neutral
  1600. 11p gain,17q gain,153,110,0,0.476028092307694,neutral
  1601. 19q loss,8q loss,94,67.6,0.000109040105193951,0.475637450344593,neutral
  1602. 3p loss,6p gain,324,233.1,0,0.475044791279067,neutral
  1603. TP53,4q loss,636,457.6,0,0.474939704549786,neutral
  1604. 2p loss,4p gain,41,29.5,0.0257063160648875,0.474908818083955,neutral
  1605. ALK,4q gain,46,33.1,0.0158492677712453,0.474802521907017,neutral
  1606. 17p gain,19p loss,66,91.7,0.00259140625,-0.474455648086792,neutral
  1607. 22q gain,6q loss,101,72.7,0.000150772727272727,0.474327968115677,neutral
  1608. 4p loss,7q gain,472,339.8,0,0.474100995173374,neutral
  1609. 21q gain,2q gain,50,36,0.0134506857451404,0.473931076122825,neutral
  1610. 10q gain,4q gain,45,32.4,0.0172469877594465,0.473931063655096,neutral
  1611. MET,3q gain,30,21.6,0.0370553861892583,0.473931001316463,neutral
  1612. 12q loss,7q loss,111,80,6.61635638297872e-05,0.472487721098395,neutral
  1613. 6p loss,8p gain,24,17.3,0.0891626493633692,0.472262135167074,neutral
  1614. 17q gain,5p gain,678,488.8,0,0.472040979968627,neutral
  1615. 1p gain,5p gain,483,348.3,0,0.471692704584829,neutral
  1616. 19p loss,2p gain,255,183.9,0,0.471575745460585,neutral
  1617. TP53,1q loss,74,53.4,4.47638326585695e-05,0.470685453619949,neutral
  1618. ROS1,9q loss,21,29.1,0.393316763754045,-0.470629634016093,neutral
  1619. 13q loss,16p gain,414,298.8,0,0.470450606162191,neutral
  1620. 16p gain,6p gain,228,164.6,0,0.470069464258033,neutral
  1621. 20q gain,9q loss,528,381.2,0,0.469989799813499,neutral
  1622. EGFR 19del,14q gain,440,317.7,0,0.469838421076445,neutral
  1623. 16p gain,3p loss,366,264.3,0,0.469667208362222,neutral
  1624. 17p gain,18q gain,18,13,0.144619341736695,0.469484975033253,neutral
  1625. 14q gain,21q loss,53,38.3,0.0052108277027027,0.468647863049461,neutral
  1626. 16p loss,8q gain,565,408.3,0,0.468621290164996,neutral
  1627. 8q gain,9q gain,180,130.1,0,0.468375913757728,neutral
  1628. mut_Negative,1q gain,301,416.4,0,-0.46820656836914,neutral
  1629. 5p loss,6q gain,12,16.6,0.994658713968958,-0.468148502586176,neutral
  1630. 11q gain,19p gain,61,44.1,0.00491268513284341,0.468030496258397,neutral
  1631. TP53,19q gain,217,156.9,0,0.467849664897417,neutral
  1632. 17q gain,3q loss,182,131.6,0,0.467778930992495,neutral
  1633. 17q loss,5q gain,91,65.8,0.000637489150650961,0.467778900634176,neutral
  1634. 11q loss,4p gain,39,28.2,0.0321044352331606,0.46777881967868,neutral
  1635. EGFR 19del,2q loss,277,200.3,0,0.467723535179985,neutral
  1636. mut_Negative,14q loss,138,99.8,0,0.467556506312772,neutral
  1637. 17q gain,5q loss,303,219.2,0,0.467069977197105,neutral
  1638. EGFR L858R,PIK3CA,81,58.6,0.000989245283018868,0.467021175266555,neutral
  1639. 18q loss,21q gain,115,83.2,2.27347498286498e-05,0.466978379741547,neutral
  1640. 14q gain,5p gain,809,585.8,0,0.465731502643265,neutral
  1641. 1p gain,9p gain,87,63,0.000834337423312883,0.465663509176624,neutral
  1642. 4p gain,4q gain,49,35.5,0.0148668545356951,0.464962612645143,neutral
  1643. 19q gain,7p gain,248,179.7,0,0.464749689653954,neutral
  1644. KRAS,9p loss,104,143.5,0.000301545454545455,-0.464467170350161,neutral
  1645. 11q loss,16q gain,92,66.7,0.000695302096177559,0.463947040278368,neutral
  1646. KRAS,MET,12,8.7,0.228295546558704,0.463946643735948,neutral
  1647. RET,20q loss,4,2.9,0.462154758909853,0.463945731690975,neutral
  1648. 11q loss,14q gain,214,155.2,0,0.463482213559885,neutral
  1649. 12q gain,9q loss,245,177.7,0,0.463338045559652,neutral
  1650. 1p gain,9p loss,312,226.3,0,0.463309426971506,neutral
  1651. TP53,8q loss,145,105.2,0,0.462918157967895,neutral
  1652. EGFR 19del,5p loss,47,34.1,0.0117379116684842,0.462888901419524,neutral
  1653. 1q gain,2q loss,457,331.6,0,0.462750146511413,neutral
  1654. 18q loss,6p gain,327,237.3,0,0.46257851851436,neutral
  1655. 20q gain,21q gain,109,79.1,6.61635638297872e-05,0.462578485160092,neutral
  1656. 1q gain,4q loss,562,407.9,0,0.462354613617654,neutral
  1657. 14q loss,8q loss,31,22.5,0.0601143993993994,0.462343038244969,neutral
  1658. KRAS,15q loss,123,169.4,0,-0.461775526978315,neutral
  1659. 18q loss,20q gain,508,368.9,0,0.461598697256194,neutral
  1660. 19q loss,8q gain,844,612.9,0,0.461591287694875,neutral
  1661. 13q loss,1q gain,843,612.3,0,0.461293941627491,neutral
  1662. 4p loss,6q loss,330,239.7,0,0.461236099014549,neutral
  1663. 11p loss,21q gain,87,63.2,0.000656831683168317,0.46109078011148,neutral
  1664. ERBB2,11p gain,17,23.4,0.736692297979798,-0.460973551338021,neutral
  1665. 1p gain,9q loss,313,227.4,0,0.460930385577173,neutral
  1666. 16p loss,2q gain,158,114.8,0,0.460801882028293,neutral
  1667. EGFR L858R,16p gain,265,192.6,0,0.460384636029503,neutral
  1668. 10q loss,3q gain,567,412.1,0,0.460354261985076,neutral
  1669. 17p gain,9p gain,26,18.9,0.0876019862677783,0.460125180359476,neutral
  1670. 19p loss,4q loss,549,399.1,0,0.460055860511177,neutral
  1671. 19p loss,8q loss,126,91.7,0,0.458430051964131,neutral
  1672. ALK,8p loss,50,68.7,0.0349925274725275,-0.458381925616297,neutral
  1673. 3p gain,5q loss,50,68.7,0.05887675,-0.458381925616297,neutral
  1674. 6p gain,8q gain,502,365.4,0,0.458210719466968,neutral
  1675. 3q loss,8p gain,25,18.2,0.0923975243664717,0.457989428851927,neutral
  1676. 14q gain,19p loss,707,514.7,0,0.457978424866273,neutral
  1677. 11q gain,4p loss,289,210.4,0,0.457934769446827,neutral
  1678. 6q gain,8q gain,342,249,0,0.457850567062323,neutral
  1679. 14q gain,18q loss,508,370.2,0,0.456523591217771,neutral
  1680. 12q loss,7p gain,690,502.9,0,0.45632480069522,neutral
  1681. 18q loss,19q gain,135,98.4,0,0.456229146849906,neutral
  1682. 11q loss,17p gain,38,27.7,0.0373756032719836,0.456113301109859,neutral
  1683. 11p gain,5p gain,300,218.7,0,0.456009262458134,neutral
  1684. 11p loss,14q gain,386,281.4,0,0.455978505025949,neutral
  1685. 1p gain,5p loss,31,22.6,0.0548830920060332,0.455945269883975,neutral
  1686. 7q gain,8p loss,618,450.6,0,0.455759515883689,neutral
  1687. 16p gain,8p loss,405,295.3,0,0.455740538292262,neutral
  1688. 16q gain,8p gain,24,17.5,0.101012640963855,0.455679260502068,neutral
  1689. ROS1,2p gain,7,9.6,1,-0.455678925591298,neutral
  1690. 12q gain,1q gain,335,244.4,0,0.454916794449216,neutral
  1691. 2p gain,7p gain,331,241.5,0,0.454808011818473,neutral
  1692. 5q loss,9p gain,108,78.8,0.00017153199741435,0.454763728094207,neutral
  1693. 7p gain,8q loss,165,120.4,0,0.454630599984372,neutral
  1694. 14q loss,8p gain,20,14.6,0.133117887788779,0.454031364095098,neutral
  1695. 13q loss,14q gain,563,411,0,0.453996518921612,neutral
  1696. PIK3CA,8p loss,123,89.8,2.27347498286498e-05,0.453870922121276,neutral
  1697. 19q loss,3p gain,136,99.3,0,0.453740989403339,neutral
  1698. 4q loss,5p gain,622,454.2,0,0.4535868657421,neutral
  1699. 16p gain,21q gain,79,57.7,0.00164070917759237,0.453281267004816,neutral
  1700. 17p loss,8q gain,906,661.9,0,0.45289777359263,neutral
  1701. mut_Negative,7p gain,391,535,0,-0.452370274049848,neutral
  1702. 1q gain,5p gain,1194,872.7,0,0.45224512988218,neutral
  1703. 10q loss,1p gain,359,262.4,0,0.452216109298066,neutral
  1704. 17p loss,7q gain,622,454.8,0,0.451682317598644,neutral
  1705. 17p gain,5q loss,64,46.8,0.00492864971751412,0.451563292456902,neutral
  1706. 14q gain,7p gain,924,676,0,0.450869599405813,neutral
  1707. 1q loss,6p gain,15,20.5,0.824534265060241,-0.450661150966699,neutral
  1708. MET,17p gain,3,4.1,1,-0.450660118798211,neutral
  1709. PIK3CA,18q gain,22,16.1,0.122721121140143,0.450442595096768,neutral
  1710. 10q loss,7q gain,669,489.6,0,0.450402644934309,neutral
  1711. 21q gain,4p loss,94,68.8,0.000436994981179423,0.450252135647058,neutral
  1712. 22q gain,8p loss,146,106.9,0,0.44970647990418,neutral
  1713. 10q loss,17q gain,503,368.3,0,0.449676992303225,neutral
  1714. 3q gain,5q loss,335,245.3,0,0.449613845926924,neutral
  1715. 10q gain,16p gain,58,42.5,0.00823733924611973,0.448589968272756,neutral
  1716. 13q gain,16p loss,130,95.3,4.47638326585695e-05,0.447963463597841,neutral
  1717. 1q gain,4q gain,397,291.1,0,0.447624154687362,neutral
  1718. 4q gain,5p gain,442,324.1,0,0.447607337087227,neutral
  1719. mut_Negative,17q gain,171,233.2,0,-0.447571440924245,neutral
  1720. 12q gain,2q loss,141,103.4,2.27347498286498e-05,0.447458939764389,neutral
  1721. 19q gain,9p loss,138,101.2,0,0.447458938955545,neutral
  1722. 18q loss,7q gain,560,410.7,0,0.447341870487975,neutral
  1723. 21q gain,3q gain,101,74.1,0.000234191270860077,0.446809793478736,neutral
  1724. 12q loss,5p gain,594,435.8,0,0.446796725755495,neutral
  1725. 12q gain,6q loss,175,128.4,0,0.44670968967768,neutral
  1726. 4p gain,7q gain,97,71.2,0.00017153199741435,0.446107452213838,neutral
  1727. TP53,16p loss,576,422.8,0,0.446093425871382,neutral
  1728. 1q gain,3q loss,320,235,0,0.445411132015305,neutral
  1729. 5p gain,7p loss,55,40.4,0.000949445797807552,0.445076230865704,neutral
  1730. 1p gain,4p gain,52,38.2,0.0147580655561526,0.444938884765224,neutral
  1731. 11q gain,19p loss,481,353.4,0,0.444734843276159,neutral
  1732. 16q gain,2p loss,95,69.8,0.000892102689486553,0.444700422181467,neutral
  1733. 3q loss,7p gain,411,302,0,0.444589831687314,neutral
  1734. 16q loss,9p loss,385,282.9,0,0.444566255549329,neutral
  1735. 19p loss,6q loss,548,402.7,0,0.444470411403134,neutral
  1736. 6p gain,6q loss,241,177.1,0,0.444468912766105,neutral
  1737. EGFR 19del,8q loss,77,56.6,0.00167724568709102,0.444056325220267,neutral
  1738. 19p loss,8q gain,1130,830.8,0,0.443749646747347,neutral
  1739. 22q gain,8q gain,204,150,0,0.443606626016292,neutral
  1740. 16q loss,5p gain,592,435.3,0,0.443587146955714,neutral
  1741. PIK3CA,5q loss,79,58.1,0.00199254416961131,0.443314423967172,neutral
  1742. 14q gain,8q gain,775,570,0,0.443234384414476,neutral
  1743. 17p loss,5q gain,290,213.3,0,0.443168916672932,neutral
  1744. 5q gain,8q gain,403,296.5,0,0.442747721123343,neutral
  1745. BRAF,7p gain,61,82.9,0.00208944881889764,-0.442562796566479,neutral
  1746. 11p loss,3q gain,357,262.7,0,0.442507859276488,neutral
  1747. 14q gain,5q loss,357,262.7,0,0.442507859276488,neutral
  1748. 12q gain,14q gain,223,164.1,0,0.442468448073198,neutral
  1749. 11p loss,6q gain,167,122.9,0,0.442363155989963,neutral
  1750. TP53,6p gain,514,378.4,0,0.441856260683652,neutral
  1751. 22q loss,4q gain,315,231.9,0,0.441848992216534,neutral
  1752. ERBB2,5q gain,24,32.6,0.513443958333333,-0.441837400044174,neutral
  1753. 1q gain,8p loss,822,605.2,0,0.441726400065024,neutral
  1754. mut_Negative,11p loss,164,222.7,0,-0.44140572009513,neutral
  1755. 17p loss,9p gain,167,123,0,0.441189756231459,neutral
  1756. 15q loss,7p gain,1168,860.5,0,0.440793172425879,neutral
  1757. PIK3CA,6p gain,68,50.1,0.00512032676056338,0.44072406714046,neutral
  1758. ROS1,5q gain,19,14,0.144784031731218,0.440572320202871,neutral
  1759. 2p loss,7p gain,422,311,0,0.440328406374761,neutral
  1760. 17p loss,6q gain,243,179.1,0,0.440190955324863,neutral
  1761. 19q loss,6q loss,403,297.1,0,0.439831220819559,neutral
  1762. 16q loss,21q gain,80,59,0.00200971176470588,0.439284981337827,neutral
  1763. 1p gain,21q gain,64,47.2,0.00734649972175849,0.439284965290907,neutral
  1764. PIK3CA,16p gain,77,56.8,0.00254412550842533,0.438967449444979,neutral
  1765. KRAS,7p gain,188,254.8,0,-0.438632595572888,neutral
  1766. 10q gain,2q loss,50,36.9,0.0178634821903243,0.438307176166458,neutral
  1767. 17p loss,2q gain,252,186.1,0,0.437345658055361,neutral
  1768. 1q gain,21q gain,160,118.2,0,0.436841837710217,neutral
  1769. 17q loss,4p gain,17,23,0.819154782608696,-0.436098893421358,neutral
  1770. 1q gain,9q loss,771,569.9,0,0.436022060857923,neutral
  1771. 16p loss,8q loss,61,45.1,0.00814992235163616,0.435681725814232,neutral
  1772. 13q loss,7p gain,1064,786.7,0,0.435612657343054,neutral
  1773. 21q loss,7p gain,99,73.2,0,0.435584825320221,neutral
  1774. 13q gain,14q gain,180,133.1,0,0.435486307063058,neutral
  1775. 10q loss,5p gain,990,732.2,0,0.435190746418901,neutral
  1776. 10q gain,19q loss,85,62.9,0.000734843076923077,0.43440276451133,neutral
  1777. 20q loss,9p gain,40,29.6,0.043265950203252,0.434402697422599,neutral
  1778. ROS1,11q gain,25,18.5,0.0924171456405261,0.434402621388729,neutral
  1779. RET,2p gain,5,3.7,0.439964750844595,0.434401810362454,neutral
  1780. 19p loss,20q gain,693,512.9,0,0.434177773737176,neutral
  1781. 5q loss,8q gain,573,424.1,0,0.434130647207953,neutral
  1782. 17q gain,7p gain,762,564,0,0.434095828447835,neutral
  1783. 12q gain,3q loss,99,73.3,0.000872894736842105,0.433615275739332,neutral
  1784. 10q gain,5p gain,131,97,0,0.433510120748271,neutral
  1785. 15q loss,20q gain,605,448,0,0.433436401747538,neutral
  1786. KRAS,18q gain,37,27.4,0.0524035869017632,0.433349240942371,neutral
  1787. 16q gain,5p gain,340,251.8,0,0.433256448442979,neutral
  1788. 14q gain,9p loss,514,380.7,0,0.433113779691125,neutral
  1789. 6p gain,7p gain,585,433.3,0,0.433070379452191,neutral
  1790. RET,3p gain,2,2.7,1,-0.432957537124007,neutral
  1791. 13q gain,20q gain,179,132.6,0,0.43287878383599,neutral
  1792. 17q gain,8q gain,642,475.6,0,0.432824574401685,neutral
  1793. TP53,3q gain,744,551.2,0,0.432726726508452,neutral
  1794. 2q gain,7p gain,414,306.8,0,0.432332272707503,neutral
  1795. 19p loss,5p gain,1152,853.9,0,0.432001681186904,neutral
  1796. 22q gain,5p gain,208,154.2,0,0.43178073891377,neutral
  1797. 1p loss,7q gain,269,199.5,0,0.431217407650524,neutral
  1798. 19q loss,21q gain,115,85.3,8.76354029062087e-05,0.431016170833302,neutral
  1799. 6q gain,7p gain,398,295.3,0,0.430587061690443,neutral
  1800. 17p loss,3q gain,516,382.9,0,0.430403395741547,neutral
  1801. 12q loss,5p loss,38,28.2,0.0400444359367024,0.430304123994799,neutral
  1802. 13q loss,6p gain,355,263.5,0,0.430016048642892,neutral
  1803. MET,17q gain,26,19.3,0.0816743814687038,0.429910583132785,neutral
  1804. 15q loss,1q gain,902,669.7,0,0.429612459882582,neutral
  1805. 17p loss,5p gain,916,680.3,0,0.42917650375557,neutral
  1806. 3p loss,7q gain,543,403.3,0,0.429098783082562,neutral
  1807. 4q gain,5q loss,108,145.4,0.00113401709401709,-0.428995922508385,neutral
  1808. 14q gain,5p loss,51,37.9,0.0124701950162514,0.428299300910847,neutral
  1809. 1q gain,4p loss,614,456.4,0,0.427939855855201,neutral
  1810. 1q gain,5p loss,76,56.5,0.000416970458830924,0.427748485512448,neutral
  1811. 15q gain,6q gain,39,29,0.0476179737241031,0.427421096175472,neutral
  1812. RET,13q loss,9,12.1,1,-0.427009730260779,neutral
  1813. 16p loss,6q loss,266,197.9,0,0.426654614677492,neutral
  1814. BRAF,4q loss,25,33.6,0.480113202416918,-0.426532990412233,neutral
  1815. 11p gain,8q gain,286,212.8,0,0.426516978812626,neutral
  1816. 22q gain,5q loss,93,69.2,0.00110566666666667,0.426458625005232,neutral
  1817. 14q loss,6q gain,41,55.1,0.203572745098039,-0.426428319021022,neutral
  1818. 1q gain,5q loss,526,391.4,0,0.426419034120661,neutral
  1819. mut_Negative,1q loss,34,25.3,0.0506164498234997,0.426397215530319,neutral
  1820. mut_Negative,10q loss,260,349.3,0,-0.425955005293241,neutral
  1821. 15q loss,16p gain,439,326.8,0,0.425812944994135,neutral
  1822. ERBB2,5p loss,9,6.7,0.330729100043687,0.425763355590928,neutral
  1823. 16q gain,7q gain,226,168.3,0,0.425287574087035,neutral
  1824. 7p gain,8p loss,1044,777.6,0,0.425021583117207,neutral
  1825. 19q loss,3q gain,476,354.6,0,0.424769026920197,neutral
  1826. 7p gain,9p loss,978,728.6,0,0.424707465047377,neutral
  1827. 4p gain,8q gain,139,103.6,0,0.424060844459051,neutral
  1828. 19q gain,5p gain,209,155.8,0,0.42380768533588,neutral
  1829. 1q gain,8q gain,1139,849.2,0,0.423591466367555,neutral
  1830. PIK3CA,11q loss,46,34.3,0.0329126021727884,0.423425177790148,neutral
  1831. 19p loss,9p gain,207,154.4,0,0.422957991375223,neutral
  1832. 16p gain,5p loss,37,27.6,0.0457476598984772,0.422856870940169,neutral
  1833. 5p gain,7q loss,239,178.3,0,0.422703894693015,neutral
  1834. 14q gain,9q gain,108,80.6,0.000254990390775144,0.422179523111321,neutral
  1835. 5p gain,6p gain,503,375.5,0,0.421745482552425,neutral
  1836. 10q gain,7p gain,150,112,0,0.421463735805892,neutral
  1837. 11p gain,17p loss,205,153.1,0,0.421149603036186,neutral
  1838. 11p loss,5p gain,625,466.8,0,0.421051620906521,neutral
  1839. 22q loss,8q gain,906,676.7,0,0.42099465632825,neutral
  1840. 1q gain,6q loss,551,411.6,0,0.420809327696865,neutral
  1841. EGFR 19del,11q loss,187,139.7,0,0.420706223244064,neutral
  1842. 3q gain,8p gain,51,38.1,0.0149478540772532,0.420706153586823,neutral
  1843. 13q loss,8q gain,888,663.4,0,0.420680658949026,neutral
  1844. 4q gain,8q loss,26,34.8,0.511214059701492,-0.420575542505153,neutral
  1845. 19q loss,5p gain,843,629.9,0,0.420409814154371,neutral
  1846. 10q gain,20q gain,78,58.3,0.00213000583771162,0.41997817804947,neutral
  1847. 5p gain,9q loss,849,634.6,0,0.41991702678171,neutral
  1848. 20q gain,5p gain,781,583.8,0,0.419848331287337,neutral
  1849. 10q gain,18q loss,82,61.3,0.00147068903535051,0.419736776403167,neutral
  1850. MET,5q loss,23,17.2,0.113866217120995,0.419225084724912,neutral
  1851. 4q gain,7p gain,500,374,0,0.418889815053618,neutral
  1852. 15q loss,5p gain,997,745.8,0,0.418804702638017,neutral
  1853. 5q gain,6p loss,104,77.8,0.000892102689486553,0.418741421326564,neutral
  1854. 15q loss,8q gain,970,725.7,0,0.418611472253869,neutral
  1855. 15q loss,3q gain,561,419.8,0,0.418298595554243,neutral
  1856. 11q loss,7p gain,397,297.1,0,0.418190389975591,neutral
  1857. 11q gain,9q loss,351,262.7,0,0.418054816242746,neutral
  1858. 11q gain,9q gain,74,55.4,0.00505411963882619,0.417639229011656,neutral
  1859. 3p gain,7p gain,236,176.7,0,0.417484799182155,neutral
  1860. 2q loss,5p gain,493,369.2,0,0.417185083806844,neutral
  1861. EGFR 19del,14q loss,85,113.5,0.00812774834437086,-0.417157508534084,neutral
  1862. ALK,15q loss,57,76.1,0.0367559459459459,-0.416934470925907,neutral
  1863. 11p loss,8q gain,606,454.2,0,0.415990079696843,neutral
  1864. 11p loss,20q gain,374,280.4,0,0.415551907887789,neutral
  1865. 6p gain,9q loss,327,245.2,0,0.415331641976297,neutral
  1866. 11q gain,7p gain,619,464.2,0,0.415192878984842,neutral
  1867. 21q gain,9p loss,114,85.5,0.000150772727272727,0.415037457094783,neutral
  1868. 3q loss,9q gain,27,36,0.514184213649852,-0.415037365696013,neutral
  1869. ALK,13q gain,30,22.5,0.0930342599805258,0.415037338979457,neutral
  1870. 16q gain,1p loss,58,77.3,0.0779730805687204,-0.414415451805238,neutral
  1871. 11q loss,1p gain,123,92.3,0.000275357598978289,0.414255723568123,neutral
  1872. 15q gain,16q loss,37,49.3,0.254062971014493,-0.414062278579955,neutral
  1873. 7q gain,8q loss,93,69.8,0.000656831683168317,0.414003628224413,neutral
  1874. 13q loss,5p gain,908,681.8,0,0.413343692766952,neutral
  1875. 13q gain,1q gain,264,198.3,0,0.412853233911354,neutral
  1876. 16p loss,3p gain,88,66.1,0.00229891089108911,0.412853197700132,neutral
  1877. ERBB2,4q gain,26,34.6,0.529566260869565,-0.412260276689493,neutral
  1878. 16p gain,7q gain,379,284.8,0,0.412248689501462,neutral
  1879. 17p loss,19p gain,56,74.5,0.0508606666666667,-0.411813534430794,neutral
  1880. KRAS,16q gain,43,57.2,0.210540877862595,-0.411678403897884,neutral
  1881. 19p loss,1q gain,1020,766.8,0,0.41164690540765,neutral
  1882. 18q loss,5p gain,817,614.2,0,0.411627560226607,neutral
  1883. 11q gain,16p loss,231,173.7,0,0.41129507699065,neutral
  1884. 1q gain,3p loss,720,541.6,0,0.410769161041823,neutral
  1885. 16p gain,2p loss,157,118.1,2.27347498286498e-05,0.410755564114471,neutral
  1886. 15q gain,17p loss,58,77.1,0.0459816931216931,-0.410677898279564,neutral
  1887. 16q loss,4q gain,193,145.2,0,0.41055936955157,neutral
  1888. 16p loss,2p gain,120,90.3,0.000335686274509804,0.410236473472721,neutral
  1889. 20q gain,7p gain,895,673.5,0,0.410209731387952,neutral
  1890. 10q loss,19q gain,156,117.4,0,0.410113590232871,neutral
  1891. 16q gain,8p loss,232,174.6,0,0.410071225942045,neutral
  1892. 2q loss,7p gain,566,426,0,0.409948614229275,neutral
  1893. 22q gain,9p gain,21,27.9,0.741907889447236,-0.409875624260494,neutral
  1894. 5q gain,7p gain,467,351.6,0,0.409487469314166,neutral
  1895. ALK,4p loss,39,51.8,0.217101390977444,-0.409477882527714,neutral
  1896. 3p loss,5p gain,801,603.2,0,0.409165808121224,neutral
  1897. 15q loss,9p gain,179,134.8,0,0.409139064542396,neutral
  1898. 11q loss,15q gain,22,29.2,0.695027209302326,-0.408464683658593,neutral
  1899. EGFR 19del,15q gain,45,59.7,0.153762627118644,-0.407805851106346,neutral
  1900. 18q loss,7p gain,940,708.6,0,0.407689286322074,neutral
  1901. 20q loss,5p gain,217,163.6,0,0.407522272689443,neutral
  1902. PIK3CA,2p gain,37,27.9,0.0662243675298805,0.407260021509747,neutral
  1903. MET,6q loss,24,18.1,0.112609688846338,0.407044512579258,neutral
  1904. 22q loss,5p gain,922,695.5,0,0.406716230791272,neutral
  1905. TP53,22q gain,206,155.4,0,0.406657810859093,neutral
  1906. ERBB2,13q loss,55,72.9,0.060649068627451,-0.406487131507291,neutral
  1907. 2p loss,5q gain,112,84.5,0.000754326982175784,0.40647544385434,neutral
  1908. 16p loss,20q gain,334,252,0,0.406424354918795,neutral
  1909. 14q gain,15q gain,88,66.4,0.00152665271966527,0.406320228847011,neutral
  1910. 15q gain,16p gain,64,48.3,0.0108813559322034,0.406048642778077,neutral
  1911. 10q loss,1q gain,871,657.5,0,0.405681819040733,neutral
  1912. 22q loss,2q gain,252,190.3,0,0.405148153551446,neutral
  1913. 7q gain,9p loss,559,422.2,0,0.404921696021003,neutral
  1914. mut_Negative,19q loss,227,300.5,0,-0.404672677875242,neutral
  1915. 4p gain,6p loss,36,27.2,0.0695845332671301,0.404390125425411,neutral
  1916. ERBB2,21q loss,9,6.8,0.340328535947712,0.404389736464141,neutral
  1917. 11q gain,22q loss,381,287.9,0,0.404223196572285,neutral
  1918. 3q gain,8p loss,502,379.4,0,0.403967676139904,neutral
  1919. 10q gain,11q loss,34,25.7,0.0789364098765432,0.403766249906004,neutral
  1920. 2q gain,4p loss,184,139.1,0,0.403583321093083,neutral
  1921. 2q loss,3p gain,44,58.2,0.207280233463035,-0.40351554938415,neutral
  1922. 19p loss,21q gain,153,115.7,0,0.403142758073577,neutral
  1923. 15q loss,17q gain,496,375.1,0,0.40306484823775,neutral
  1924. TP53,9p gain,234,177,0,0.402759149645848,neutral
  1925. 12q loss,21q gain,78,59,0.00508868584320361,0.402759109936736,neutral
  1926. 18q loss,1q gain,729,551.5,0,0.402557922366135,neutral
  1927. 10q loss,9p gain,175,132.4,0,0.402451773387309,neutral
  1928. 19p loss,6p gain,436,329.9,0,0.402299346457411,neutral
  1929. 12q gain,4q gain,120,90.8,0.000496618839675608,0.402270164542437,neutral
  1930. 12q gain,6p gain,139,105.2,0.000130333988212181,0.401950144971268,neutral
  1931. 1p gain,4q loss,215,162.8,0,0.40123593869504,neutral
  1932. 17p gain,7p gain,159,120.4,0,0.401191344322385,neutral
  1933. EGFR 19del,16p gain,305,231,0,0.400916375881338,neutral
  1934. 17q loss,5p gain,277,209.8,0,0.400871281676882,neutral
  1935. 18q gain,4p gain,10,13.2,1,-0.400537579839784,neutral
  1936. 1q gain,7p gain,1329,1007,0,0.400277417798219,neutral
  1937. 6p gain,9p loss,322,244,0,0.400179526229079,neutral
  1938. 16q loss,8q gain,559,423.6,0,0.400145685488758,neutral
  1939. KRAS,10q gain,29,22,0.111059133141762,0.398549218200914,neutral
  1940. 5q loss,7q gain,384,291.4,0,0.398105421605094,neutral
  1941. ERBB2,14q loss,17,22.4,0.964101399548533,-0.397963781336153,neutral
  1942. 17q loss,7p gain,319,242.1,0,0.397953330287972,neutral
  1943. 11q gain,17p loss,371,281.6,0,0.397771840525459,neutral
  1944. 15q gain,5p gain,145,110.1,0,0.397238399799168,neutral
  1945. ERBB2,16p loss,59,44.8,0.01741425,0.397216144686055,neutral
  1946. 5q gain,6p gain,155,117.7,6.61635638297872e-05,0.397153865626337,neutral
  1947. 15q loss,21q gain,133,101,4.47638326585695e-05,0.397070918381616,neutral
  1948. 16p gain,4q loss,262,199,0,0.39679836356126,neutral
  1949. 5q loss,7p gain,662,502.9,0,0.396559656721259,neutral
  1950. 10q gain,5q gain,40,30.4,0.0587824887330996,0.395928562434195,neutral
  1951. ROS1,15q loss,26,34.2,0.42032609375,-0.395484568815436,neutral
  1952. 10q loss,7p gain,1111,844.8,0,0.395177072826199,neutral
  1953. 15q loss,6p gain,379,288.2,0,0.395127500890725,neutral
  1954. 19q gain,8p loss,142,108,4.47638326585695e-05,0.394859585356584,neutral
  1955. 5p gain,8p loss,886,674,0,0.394558102251429,neutral
  1956. 21q loss,2p gain,18,13.7,0.200107540983607,0.393820761804481,neutral
  1957. 11p loss,7q gain,410,312.1,0,0.393615541435872,neutral
  1958. 19q loss,9q gain,66,86.7,0.0425711229946524,-0.393565916786681,neutral
  1959. 22q gain,3q gain,114,86.8,0.000496618839675608,0.393266836950719,neutral
  1960. 15q gain,22q loss,60,78.8,0.0527015736040609,-0.393233071594457,neutral
  1961. TP53,13q loss,902,687,0,0.392817329431755,neutral
  1962. 12q loss,1p gain,205,156.2,0,0.39222943426416,neutral
  1963. 12q loss,18q gain,71,54.1,0.00918948123620309,0.392190367089813,neutral
  1964. TP53,7q gain,859,654.7,0,0.391824147196389,neutral
  1965. TP53,11p loss,617,470.3,0,0.391689149885155,neutral
  1966. ROS1,9q gain,8,6.1,0.382645242801891,0.391190195620251,neutral
  1967. 4q loss,7p gain,687,524.1,0,0.39046798354038,neutral
  1968. 16p loss,5p gain,550,419.6,0,0.390416932570308,neutral
  1969. 11p gain,19q gain,46,35.1,0.0467334412955466,0.390162733244968,neutral
  1970. MET,2q loss,19,14.5,0.186290385144429,0.389946282667239,neutral
  1971. 21q gain,7p gain,199,151.9,0,0.389646538449535,neutral
  1972. 10q gain,6q loss,60,45.8,0.0165938453333333,0.389614827849208,neutral
  1973. 5p gain,6p loss,325,248.1,0,0.389517969151626,neutral
  1974. 20q gain,4q gain,255,194.7,0,0.389244345503844,neutral
  1975. 5p gain,8q gain,1238,945.6,0,0.388709370320601,neutral
  1976. 3p gain,9p loss,76,99.5,0.0244918023255814,-0.38869706226625,neutral
  1977. 3p loss,7p gain,911,695.9,0,0.388571041721101,neutral
  1978. KRAS,8p loss,117,153.1,0.00138208333333333,-0.387965723953958,neutral
  1979. 2q gain,4q loss,95,124.3,0.0108440384615385,-0.387826842037113,neutral
  1980. 11q loss,7p loss,14,10.7,0.256595329181495,0.387815712727417,neutral
  1981. 8p loss,8q gain,858,655.8,0,0.387721740809465,neutral
  1982. 6q loss,7q gain,401,306.5,0,0.387715151671586,neutral
  1983. 11q gain,8p loss,365,279,0,0.387631329754584,neutral
  1984. 12q loss,1q gain,512,391.4,0,0.387500045578333,neutral
  1985. PIK3CA,15q loss,130,99.4,6.61635638297872e-05,0.387193832189729,neutral
  1986. EGFR L858R,3p gain,53,69.3,0.14608914893617,-0.386862928661154,neutral
  1987. 3q gain,9q loss,467,357.2,0,0.38669045997963,neutral
  1988. 16q loss,1q gain,511,390.9,0,0.386523697861462,neutral
  1989. 6q gain,8p loss,232,177.5,0,0.386305761642066,neutral
  1990. 21q gain,5p gain,172,131.6,0,0.386249050104557,neutral
  1991. 10q gain,13q loss,89,68.1,0.00158423880597015,0.38615048809277,neutral
  1992. 14q loss,8q gain,266,203.6,0,0.385688667690228,neutral
  1993. TP53,2q loss,486,372,0,0.385653683400708,neutral
  1994. 10q loss,16p gain,419,320.8,0,0.385276091591866,neutral
  1995. 16q gain,3p loss,204,156.2,0,0.385174677075187,neutral
  1996. 2p loss,5p gain,352,269.6,0,0.384754919816029,neutral
  1997. 1q gain,7q loss,209,160.1,0,0.38452961336834,neutral
  1998. 22q gain,6q gain,53,40.6,0.0347763781555899,0.384512549128409,neutral
  1999. 2p loss,6p gain,136,104.2,0.000295031766200762,0.384251341485295,neutral
  2000. 19p gain,5p gain,139,106.5,0,0.384231420824359,neutral
  2001. 4p loss,5p gain,663,508.2,0,0.383612488318369,neutral
  2002. 22q gain,5q gain,63,48.3,0.0205404918032787,0.383328569856106,neutral
  2003. 13q gain,7p loss,12,9.2,0.292191039189784,0.383328273650941,neutral
  2004. RET,21q gain,3,2.3,0.564091763990268,0.383327175953462,neutral
  2005. TP53,16q loss,572,438.6,0,0.383109327320916,neutral
  2006. 2p loss,7q gain,235,180.3,0,0.382261341394936,neutral
  2007. 5p gain,9p gain,229,175.7,0,0.382233387864443,neutral
  2008. 10q loss,11q gain,395,303.1,0,0.382058790093435,neutral
  2009. 11q loss,16p gain,147,112.8,0.000150772727272727,0.382049057568959,neutral
  2010. 20q loss,7p gain,246,188.8,0,0.381799533096969,neutral
  2011. 10q gain,4q loss,59,45.3,0.0208867617538299,0.38120383025184,neutral
  2012. 3q gain,7p gain,822,631.2,0,0.381041183250236,neutral
  2013. 5p gain,9p loss,822,631.5,0,0.380355654599638,neutral
  2014. PIK3CA,2q loss,64,49.2,0.0187406100795756,0.379413521738535,neutral
  2015. 16p gain,5p gain,554,425.9,0,0.379371238553608,neutral
  2016. 1q gain,22q loss,812,624.5,0,0.378778150242797,neutral
  2017. 17q gain,9q loss,415,319.2,0,0.378650674465827,neutral
  2018. KRAS,11q loss,45,58.5,0.270671921708185,-0.378511549269383,neutral
  2019. 16q loss,17p gain,36,46.8,0.389424415584416,-0.378511530773301,neutral
  2020. 18q gain,3q loss,25,32.5,0.703562133676093,-0.378511490081927,neutral
  2021. 13q gain,5p loss,11,14.3,1,-0.378511320590678,neutral
  2022. 14q gain,17p loss,533,410.1,0,0.378159781207668,neutral
  2023. 3q loss,5p gain,340,261.7,0,0.377620809281417,neutral
  2024. KRAS,9q loss,111,144.2,0.00343985185185185,-0.37751145807903,neutral
  2025. TP53,20q gain,764,588.2,0,0.377265848392203,neutral
  2026. 22q loss,6p gain,349,268.7,0,0.377230702730151,neutral
  2027. KRAS,8p gain,20,15.4,0.194108171846435,0.377069433612506,neutral
  2028. 17q gain,6q gain,167,128.7,4.47638326585695e-05,0.375836023432123,neutral
  2029. 19q loss,7q loss,150,115.6,6.61635638297872e-05,0.375821074261627,neutral
  2030. BRAF,7q gain,37,48,0.296778063380282,-0.375509045736116,neutral
  2031. 8p loss,9p gain,158,121.8,2.27347498286498e-05,0.375410398020079,neutral
  2032. 16p gain,6p loss,141,108.7,0.000275357598978289,0.375343191855012,neutral
  2033. 17p loss,7p gain,1018,784.9,0,0.375156792602603,neutral
  2034. RET,5q gain,7,5.4,0.413137777305567,0.374394904117932,neutral
  2035. 19q gain,7q gain,135,104.2,0.000150772727272727,0.373604098071568,neutral
  2036. 11p loss,22q gain,96,74.1,0.00311267127230858,0.373560818887736,neutral
  2037. 21q gain,7q gain,114,88,0.000597472049689441,0.373458358137026,neutral
  2038. EGFR L858R,5p loss,22,28.5,0.766006953316953,-0.373458245965818,neutral
  2039. 14q gain,22q loss,543,419.2,0,0.373313473307808,neutral
  2040. 21q gain,22q loss,122,94.2,0.000275357598978289,0.373082147938821,neutral
  2041. 19p gain,7p gain,159,122.8,0,0.372716178053768,neutral
  2042. 12q loss,8q gain,549,424.1,0,0.372401658556921,neutral
  2043. mut_Negative,9q loss,234,302.8,0,-0.371856661506478,neutral
  2044. 21q gain,3p gain,16,20.7,1,-0.371558657881802,neutral
  2045. 1p loss,5p gain,386,298.4,0,0.371353300928036,neutral
  2046. PIK3CA,3p loss,104,80.4,0.00137543870192308,0.371316081130526,neutral
  2047. 6q loss,7p gain,684,528.9,0,0.371001343546681,neutral
  2048. 11q loss,5p gain,333,257.5,0,0.370949732297865,neutral
  2049. 19q gain,8q gain,196,151.6,0,0.37058387927379,neutral
  2050. 1q gain,2p loss,313,242.1,0,0.370559564322665,neutral
  2051. 6p loss,7p gain,370,286.2,0,0.370501587260133,neutral
  2052. 7p gain,9p gain,262,202.7,0,0.370220706848706,neutral
  2053. 3p gain,4p gain,13,16.8,1,-0.369949358732109,neutral
  2054. 12q gain,1p loss,108,83.6,0.00248775,0.369456425981649,neutral
  2055. 10q gain,17q loss,27,20.9,0.14782753028891,0.369456309016802,neutral
  2056. TP53,10q loss,953,737.7,0,0.36944197406186,neutral
  2057. 11p loss,9p gain,109,84.4,0.00178819312796209,0.369013192379019,neutral
  2058. 16q loss,2p gain,121,93.7,0.00104853495440729,0.36888605976418,neutral
  2059. 14q gain,6p loss,193,149.5,0,0.368455341319675,neutral
  2060. EGFR 19del,18q loss,430,333.1,0,0.36838129604235,neutral
  2061. 15q gain,7q gain,95,73.6,0.00211310929281122,0.368221703005591,neutral
  2062. 11p gain,19q loss,183,141.8,2.27347498286498e-05,0.367986093026144,neutral
  2063. 1p gain,4p loss,235,182.1,0,0.367929816641375,neutral
  2064. 20q gain,22q loss,539,417.7,0,0.367818121704193,neutral
  2065. TP53,2p gain,272,210.8,0,0.367731769101703,neutral
  2066. 10q loss,8q gain,919,712.4,0,0.367377340522116,neutral
  2067. 20q loss,3p gain,20,25.8,0.944630453514739,-0.367370903485205,neutral
  2068. ALK,1q gain,69,89,0.030546384180791,-0.367208927202563,neutral
  2069. 16q gain,8q gain,316,245,0,0.367142795943927,neutral
  2070. 11p gain,3p loss,175,135.7,2.27347498286498e-05,0.366934177425519,neutral
  2071. 13q gain,8q gain,277,214.8,0,0.366891967869418,neutral
  2072. TP53,14q gain,761,590.3,0,0.366448106461195,neutral
  2073. 2p gain,8p loss,187,145.1,0,0.365990728430085,neutral
  2074. EGFR L858R,12q loss,254,197.1,0,0.365900704218965,neutral
  2075. BRAF,13q gain,21,16.3,0.19953379498861,0.365517165343809,neutral
  2076. 11p loss,1q gain,540,419.2,0,0.365320682701883,neutral
  2077. 19p gain,2p loss,38,29.5,0.0886050171484566,0.365284354689201,neutral
  2078. 19p loss,7p gain,1269,985.2,0,0.365203532954586,neutral
  2079. 7p gain,9q loss,943,732.2,0,0.365019992853341,neutral
  2080. EGFR L858R,6q gain,149,115.7,0.000254990390775144,0.364923438374463,neutral
  2081. ROS1,8p loss,24,30.9,0.62494072972973,-0.364572298064571,neutral
  2082. TP53,17q loss,272,211.4,0,0.363631259550479,neutral
  2083. mut_Negative,7q gain,241,310,0,-0.363235055719961,neutral
  2084. 17p loss,17q gain,440,342.1,0,0.363085410260911,neutral
  2085. 20q gain,6q loss,354,275.3,0,0.362744738724427,neutral
  2086. 1q gain,9p loss,729,567.1,0,0.362315652600139,neutral
  2087. 19p loss,3p gain,173,134.6,0,0.362093604122667,neutral
  2088. 17q gain,21q loss,41,31.9,0.0633094907638542,0.362067385361945,neutral
  2089. 18q gain,5p gain,155,120.6,0,0.362038281712162,neutral
  2090. 16p loss,21q gain,73,56.8,0.0147125,0.362005477896558,neutral
  2091. 21q gain,3p loss,105,81.7,0.00169395486935867,0.361981305222873,neutral
  2092. 11q loss,8p gain,23,17.9,0.18242738171796,0.361674094964038,neutral
  2093. 12q gain,18q loss,221,172,0,0.361637786092035,neutral
  2094. 16q gain,20q loss,33,42.4,0.548329915730337,-0.361598143395358,neutral
  2095. mut_Negative,3p loss,224,287.7,0,-0.361066474534105,neutral
  2096. 16q gain,5q loss,145,112.9,0.000355318210459987,0.361007385840296,neutral
  2097. 19p loss,1p gain,393,306,0,0.360997649128856,neutral
  2098. KRAS,2p gain,61,47.5,0.0325859606421543,0.360881662014063,neutral
  2099. 19q loss,4q loss,378,294.4,0,0.360608552213371,neutral
  2100. 2q loss,4p gain,52,40.5,0.042403582697201,0.360589636476841,neutral
  2101. 15q gain,9q loss,56,71.9,0.134824612068966,-0.360564886523222,neutral
  2102. 12q gain,1q loss,19,14.8,0.222141661399549,0.36040202722136,neutral
  2103. 5p gain,8q loss,134,104.4,2.27347498286498e-05,0.360111258249882,neutral
  2104. 13q gain,19p loss,249,194,0,0.36008907345479,neutral
  2105. 12q loss,20q gain,336,261.8,0,0.359996123551472,neutral
  2106. MET,14q gain,18,23.1,0.91221277904328,-0.359895768132533,neutral
  2107. 17p gain,9p loss,87,67.8,0.00432979568671964,0.35973008063989,neutral
  2108. 11p loss,7p gain,691,538.6,0,0.359471474866294,neutral
  2109. mut_Negative,4q loss,169,216.7,0.000301545454545455,-0.35867588813324,neutral
  2110. 17q gain,3p loss,389,303.4,0,0.358549059162873,neutral
  2111. 10q gain,14q gain,75,58.5,0.00963117906336088,0.358453916657286,neutral
  2112. 18q gain,5p loss,10,7.8,0.362673976633492,0.358453563998955,neutral
  2113. 19q loss,9p gain,146,113.9,0.00017153199741435,0.358200594210694,neutral
  2114. ROS1,18q loss,22,28.2,0.751358258706468,-0.358191494697705,neutral
  2115. 18q loss,8q gain,766,597.6,0,0.358164238715738,neutral
  2116. PIK3CA,2p loss,46,35.9,0.0657450224215247,0.357649928885789,neutral
  2117. 5p loss,7p gain,93,72.6,0.000109040105193951,0.357261124409822,neutral
  2118. 8q gain,9q loss,791,617.5,0,0.357238552876145,neutral
  2119. 17q gain,7p loss,26,20.3,0.139637761614266,0.357031740038842,neutral
  2120. 16p gain,16q loss,149,190.8,0.00113401709401709,-0.356748819443766,neutral
  2121. 5q gain,6q loss,184,143.7,4.47638326585695e-05,0.356645682498065,neutral
  2122. KRAS,3p loss,107,137,0.00947714285714286,-0.356565067034277,neutral
  2123. 21q gain,8q gain,164,128.1,0,0.356425314510447,neutral
  2124. 10q loss,21q gain,127,99.2,0.000295031766200762,0.356416439437723,neutral
  2125. 3q loss,7q gain,224,175,0,0.356143792191588,neutral
  2126. 1p loss,3q gain,215,168,0,0.355875408038091,neutral
  2127. 15q gain,3q loss,38,29.7,0.0934277577821012,0.355536381430898,neutral
  2128. 16p gain,8q gain,530,414.4,0,0.354968349057962,neutral
  2129. 19p gain,5q loss,61,47.7,0.028609125,0.354819910500342,neutral
  2130. ALK,9p gain,14,17.9,1,-0.354532535797858,neutral
  2131. KRAS,9p gain,51,39.9,0.0553777398292315,0.354108421940206,neutral
  2132. 13q gain,17q gain,142,111.1,0.000456372732958099,0.354032084745658,neutral
  2133. 15q loss,6q gain,251,196.4,0,0.353892418544354,neutral
  2134. 11q loss,7q gain,220,172.2,0,0.353418362812026,neutral
  2135. 16q gain,9q loss,210,164.4,0,0.353179009816394,neutral
  2136. mut_Negative,19p loss,319,407.3,0,-0.352535380546577,neutral
  2137. 11q gain,15q loss,394,308.7,0,0.351990136610707,neutral
  2138. 16q loss,6q loss,262,205.3,0,0.351833169108377,neutral
  2139. 14q loss,5p gain,267,209.3,0,0.351267415423201,neutral
  2140. 21q loss,5p gain,81,63.5,0.0014326574685063,0.351165267026895,neutral
  2141. 4p loss,7q loss,119,93.3,0.00152665271966527,0.351012553948734,neutral
  2142. 7q gain,9q gain,114,89.4,0.00122184178743961,0.350687053045702,neutral
  2143. 17p loss,20q gain,521,408.6,0,0.350594160815278,neutral
  2144. 12q gain,5p gain,347,272.2,0,0.350268584536568,neutral
  2145. 5p gain,7p gain,1429,1121.3,0,0.349833595726128,neutral
  2146. 1p gain,2p loss,123,96.6,0.00193850649350649,0.348563189335799,neutral
  2147. 16p gain,17q loss,117,91.9,0.00233618742724098,0.34837172950369,neutral
  2148. 5q gain,9p loss,252,198,0,0.347923287806725,neutral
  2149. MET,16p loss,21,16.5,0.19953379498861,0.347923116057416,neutral
  2150. 20q gain,2p loss,206,161.9,2.27347498286498e-05,0.3475413326915,neutral
  2151. 6p loss,9p gain,57,44.8,0.0458526470588235,0.347463118068764,neutral
  2152. 11p loss,4p gain,65,51.1,0.0252342602308499,0.347116366603493,neutral
  2153. 4p loss,8q gain,629,494.5,0,0.347089489881683,neutral
  2154. 5p gain,9q gain,170,133.7,0,0.346535257890739,neutral
  2155. BRAF,18q gain,7,8.9,1,-0.346449974034741,neutral
  2156. 16p loss,1q gain,479,376.8,0,0.346226682841569,neutral
  2157. 5p gain,5q loss,554,435.8,0,0.346219772757549,neutral
  2158. 19q loss,20q gain,481,378.4,0,0.346124797185479,neutral
  2159. TP53,15q loss,955,751.5,0,0.345727624915962,neutral
  2160. BRAF,20q gain,34,43.2,0.499748012048193,-0.345496475660905,neutral
  2161. 4p loss,7p gain,745,586.4,0,0.345355316865533,neutral
  2162. TP53,BRAF,57,72.4,0.0743135576923077,-0.345027724193988,neutral
  2163. 4q gain,6p gain,159,125.2,0.000355318210459987,0.344792178743405,neutral
  2164. 19q loss,7p gain,923,726.8,0,0.34477222407956,neutral
  2165. 16p gain,1p loss,103,130.8,0.0241945882352941,-0.344718173657811,neutral
  2166. TP53,8p loss,862,679.1,0,0.344063832484822,neutral
  2167. 12q gain,7q gain,231,182,0,0.343954384402735,neutral
  2168. EGFR L858R,12q gain,97,123.1,0.0329836516853933,-0.34377407787552,neutral
  2169. 20q loss,8q gain,202,159.2,0,0.343514937894508,neutral
  2170. EGFR L858R,19p gain,38,48.2,0.480113202416918,-0.343033647556767,neutral
  2171. TP53,11q gain,514,405.3,0,0.342778176506664,neutral
  2172. 17p loss,18q gain,107,84.4,0.00199254416961131,0.342295856477209,neutral
  2173. ALK,2p gain,27,21.3,0.173718516812529,0.342105833834934,neutral
  2174. PIK3CA,1q loss,9,7.1,0.387647682403433,0.342105547855177,neutral
  2175. 18q loss,5q gain,244,192.6,0,0.341273428827351,neutral
  2176. 3q loss,5q gain,104,82.1,0.00588530039303762,0.341129364247209,neutral
  2177. 15q gain,2q loss,33,41.8,0.595791202185792,-0.341036825797131,neutral
  2178. RET,19p loss,12,15.2,1,-0.341036664730863,neutral
  2179. ERBB2,19p gain,9,11.4,1,-0.341036580362878,neutral
  2180. ERBB2,4p gain,9,11.4,1,-0.341036580362878,neutral
  2181. ROS1,6p loss,9,11.4,1,-0.341036580362878,neutral
  2182. TP53,2p loss,344,271.6,0,0.340925074165164,neutral
  2183. 14q loss,19p gain,29,22.9,0.159744997681966,0.340705169401257,neutral
  2184. 19p gain,4p loss,44,55.7,0.360600594059406,-0.340173734941827,neutral
  2185. 17q gain,1p loss,190,150.1,6.61635638297872e-05,0.340075421413349,neutral
  2186. 3p gain,9q loss,79,100,0.0604285148514851,-0.340075403247505,neutral
  2187. mut_Negative,13q loss,257,325.3,0,-0.340002451173577,neutral
  2188. 20q gain,4p gain,81,64,0.0102482352941176,0.33984995557403,neutral
  2189. 14q loss,3q gain,149,117.8,0.000456372732958099,0.338972765874368,neutral
  2190. 8q gain,9p loss,777,614.4,0,0.338736377660056,neutral
  2191. 6q loss,8q gain,564,446,0,0.338651445710766,neutral
  2192. 2p gain,7p loss,11,8.7,0.355980555073721,0.338415870947073,neutral
  2193. 16q loss,7p gain,635,502.3,0,0.338207310872888,neutral
  2194. 4q gain,6q loss,121,152.9,0.0109862420382166,-0.337581334323318,neutral
  2195. 14q gain,6q loss,349,276.3,0,0.336991463407686,neutral
  2196. 18q loss,19p gain,85,67.3,0.00841654293628809,0.336856291775819,neutral
  2197. 14q loss,7p gain,305,241.5,0,0.336786041177027,neutral
  2198. 4q loss,8q gain,558,441.9,0,0.336545184166749,neutral
  2199. 16q gain,2q gain,87,68.9,0.0141441886792453,0.33651137446912,neutral
  2200. MET,6q gain,8,10.1,1,-0.336283012906983,neutral
  2201. 19q loss,1q gain,714,565.7,0,0.335886897975671,neutral
  2202. mut_Negative,6p gain,142,179.2,0.00381812949640288,-0.335679686574854,neutral
  2203. 22q loss,2p gain,189,149.8,2.27347498286498e-05,0.335348590674676,neutral
  2204. 4p loss,5q gain,201,159.4,4.47638326585695e-05,0.334543853343848,neutral
  2205. 15q loss,1p gain,337,267.3,0,0.334288742663207,neutral
  2206. 16p loss,17q gain,266,211,0,0.334183232656488,neutral
  2207. PIK3CA,7q loss,30,23.8,0.157630612529002,0.334000801911945,neutral
  2208. 21q gain,9p gain,30,23.8,0.159542161410019,0.334000801911945,neutral
  2209. 17p loss,1q gain,770,610.9,0,0.333922200509785,neutral
  2210. 22q loss,8p gain,61,48.4,0.0233010953133228,0.333802133605561,neutral
  2211. TP53,11q loss,327,259.5,0,0.333556085664132,neutral
  2212. TP53,3p loss,765,607.7,0,0.332100451040825,neutral
  2213. 16p gain,9q loss,350,278.1,0,0.331751166716018,neutral
  2214. 13q gain,4q loss,82,103.2,0.0846992093023256,-0.331747119775424,neutral
  2215. 12q gain,4p loss,179,142.3,0.00017153199741435,0.331023904838575,neutral
  2216. 22q loss,7p gain,1009,802.4,0,0.330532659700056,neutral
  2217. EGFR 19del,13q loss,465,369.8,0,0.330485483491414,neutral
  2218. 12q loss,22q gain,87,69.2,0.0130528432432432,0.330243320444445,neutral
  2219. 13q loss,22q gain,136,108.2,0.000656831683168317,0.329906125055451,neutral
  2220. TP53,17q gain,619,492.5,0,0.329815678884092,neutral
  2221. ERBB2,6q loss,39,49,0.511214059701492,-0.329307549758731,neutral
  2222. 15q gain,9p gain,25,19.9,0.201813104233045,0.329159516224139,neutral
  2223. mut_Negative,21q gain,50,62.8,0.329010540540541,-0.328836405419052,neutral
  2224. 16q loss,17q gain,275,219,0,0.328500735396001,neutral
  2225. 7p gain,8q gain,1370,1091.1,0,0.328392558866709,neutral
  2226. 2q loss,7q gain,310,246.9,0,0.328341367125005,neutral
  2227. 5p gain,8p gain,85,67.7,0.00220488629737609,0.328306964077714,neutral
  2228. 3q gain,4q loss,321,255.7,0,0.328121125290394,neutral
  2229. 15q loss,19q gain,150,119.5,0.000254990390775144,0.327951857967185,neutral
  2230. 6p loss,8q gain,303,241.4,0,0.327892105455318,neutral
  2231. EGFR 19del,17p gain,71,56.6,0.0235906575486586,0.327016919863538,neutral
  2232. EGFR 19del,3q loss,178,141.9,0.000192724338282763,0.327002631173652,neutral
  2233. 16q loss,20q gain,328,261.5,0,0.326884857185765,neutral
  2234. 13q gain,6q loss,83,104.1,0.0871285714285714,-0.326786791833874,neutral
  2235. 12q gain,19p loss,300,239.2,0,0.326745098961636,neutral
  2236. 1p gain,3p loss,271,216.1,0,0.326593765857177,neutral
  2237. 18q loss,1p gain,276,220.1,0,0.326509108498281,neutral
  2238. 11p gain,9p loss,178,142.1,0.000130333988212181,0.32497066613452,neutral
  2239. 2q loss,8q gain,450,359.3,0,0.324736058009188,neutral
  2240. 1p gain,6p loss,71,88.9,0.169234693877551,-0.324364353524153,neutral
  2241. 4p gain,9q loss,87,69.5,0.00975373348017621,0.324002381370222,neutral
  2242. TP53,4p loss,641,512.1,0,0.323898792092017,neutral
  2243. 13q gain,1p gain,99,79.1,0.0105954665203074,0.323750793832203,neutral
  2244. 19p loss,5q gain,335,267.7,0,0.323543945765012,neutral
  2245. mut_Negative,16q loss,166,207.7,0.00163131147540984,-0.323317957161543,neutral
  2246. 16q loss,2q gain,149,119.1,0.00110566666666667,0.323138893177497,neutral
  2247. 11q loss,17q gain,162,129.5,0.000536664592408214,0.323041692848299,neutral
  2248. 11q gain,9p loss,327,261.4,0,0.323031483518039,neutral
  2249. 16q gain,6q gain,53,66.3,0.350042350993378,-0.323016456056486,neutral
  2250. 6q gain,9q loss,209,167.1,2.27347498286498e-05,0.322791191598303,neutral
  2251. 13q gain,5p gain,276,220.8,0,0.321928081819473,neutral
  2252. EGFR L858R,3q loss,148,118.4,0.00116526953361599,0.321928070517515,neutral
  2253. 1p loss,8q loss,40,32,0.114605993314231,0.321928004718948,neutral
  2254. PIK3CA,17q loss,35,28,0.139360718309859,0.32192799183775,neutral
  2255. ALK,15q gain,14,11.2,0.333770410301179,0.321927837263455,neutral
  2256. 1q loss,9p gain,12,9.6,0.354125397307859,0.321927794326177,neutral
  2257. BRAF,10q gain,9,7.2,0.407232707535121,0.321927694139241,neutral
  2258. 3p gain,7p loss,8,6.4,0.42427266723116,0.321927644045796,neutral
  2259. RET,9q gain,3,2.4,0.575804395959596,0.321926892646003,neutral
  2260. MET,7p loss,2,1.6,0.628330047732697,0.321926291528705,neutral
  2261. 11q gain,6q loss,237,189.7,2.27347498286498e-05,0.321167365195956,neutral
  2262. 13q gain,2p loss,49,61.2,0.410177917981073,-0.320749844997016,neutral
  2263. EGFR L858R,16p loss,152,189.8,0.00397105633802817,-0.320408649787345,neutral
  2264. 17p loss,21q gain,115,92.1,0.00257370005790388,0.320360768547735,neutral
  2265. TP53,1p gain,438,350.9,0,0.319870913910476,neutral
  2266. 10q loss,2q gain,250,200.3,0,0.319765659417832,neutral
  2267. EGFR 19del,1q loss,23,28.7,0.907658718535469,-0.319416751153847,neutral
  2268. 16p gain,6q gain,140,112.2,0.00184277777777778,0.319354125690738,neutral
  2269. 3p loss,8q gain,732,586.9,0,0.318728935521423,neutral
  2270. 14q loss,4q gain,56,69.8,0.328664101694915,-0.317800158330413,neutral
  2271. 10q gain,9q loss,79,63.4,0.0153775267665953,0.317369767990267,neutral
  2272. 4p gain,7p gain,153,122.8,0,0.317221069020321,neutral
  2273. 20q gain,5q gain,228,183,2.27347498286498e-05,0.317190160321004,neutral
  2274. 22q gain,2q loss,73,58.6,0.0320694919647486,0.316995750780904,neutral
  2275. 17p gain,5p gain,130,104.4,0.000234191270860077,0.316389884133296,neutral
  2276. EGFR L858R,15q gain,40,49.8,0.539577897727273,-0.316145671317411,neutral
  2277. ERBB2,3q gain,47,58.5,0.400813054662379,-0.315775807563924,neutral
  2278. 11q loss,13q gain,47,58.5,0.473639110429448,-0.315775807563924,neutral
  2279. 11p gain,18q loss,172,138.2,0.000295031766200762,0.315650928686995,neutral
  2280. ERBB2,17q loss,18,22.4,1,-0.315501668291049,neutral
  2281. 2q gain,9q loss,216,173.6,2.27347498286498e-05,0.315264348293236,neutral
  2282. ALK,9q loss,52,64.7,0.297715298245614,-0.31525403450494,neutral
  2283. 21q gain,22q gain,26,20.9,0.207681557674841,0.31500854554563,neutral
  2284. 2q loss,5q gain,144,115.8,0.00195693215339233,0.314433533942532,neutral
  2285. 18q gain,19q gain,24,19.3,0.228295546558704,0.314433411953056,neutral
  2286. 13q loss,3q gain,477,383.8,0,0.313634547352912,neutral
  2287. 15q gain,4q loss,64,51.5,0.0424832451678535,0.313499418102932,neutral
  2288. 12q gain,22q loss,242,194.8,0,0.313013355634792,neutral
  2289. 2q gain,8p loss,229,184.4,2.27347498286498e-05,0.312508927317494,neutral
  2290. KRAS,2q gain,75,60.4,0.0347917961914565,0.312341999560715,neutral
  2291. 14q loss,2p gain,56,45.1,0.0699944615384615,0.312299331425677,neutral
  2292. 5p gain,6q loss,569,458.4,0,0.311821602319556,neutral
  2293. 16p gain,17p loss,370,298.1,0,0.311728886007919,neutral
  2294. EGFR 19del,15q loss,502,404.5,0,0.311547654593608,neutral
  2295. 17p gain,4p loss,44,54.6,0.480113202416918,-0.31139736373983,neutral
  2296. ROS1,1p loss,17,13.7,0.289017370044053,0.311358648759378,neutral
  2297. EGFR 19del,3p gain,67,83.1,0.207567653846154,-0.310687339707109,neutral
  2298. TP53,9q loss,793,639.4,0,0.310602117440433,neutral
  2299. EGFR L858R,8p loss,378,304.8,0,0.310523322449134,neutral
  2300. 17p gain,8q gain,126,101.6,0.000456372732958099,0.310523304117179,neutral
  2301. mut_Negative,19p gain,63,50.8,0.0457917656012177,0.310523276619249,neutral
  2302. BRAF,16q gain,15,18.6,1,-0.310339934458064,neutral
  2303. ROS1,2p loss,10,12.4,1,-0.310339841381105,neutral
  2304. PIK3CA,10q loss,121,97.6,0.00211310929281122,0.310053966012953,neutral
  2305. TP53,18q loss,767,618.8,0,0.309753376436444,neutral
  2306. PIK3CA,12q loss,72,58.1,0.0345392466460268,0.309458694987065,neutral
  2307. 7q loss,8q gain,215,173.5,0,0.309400980960843,neutral
  2308. 21q gain,6q gain,43,34.7,0.113317607655502,0.309400916759435,neutral
  2309. 4p loss,4q gain,210,169.5,0.000109040105193951,0.309104038114792,neutral
  2310. 18q gain,2q loss,37,45.8,0.665262486631016,-0.307822252661989,neutral
  2311. 1p loss,3p gain,38,47,0.6687072,-0.306661265533871,neutral
  2312. 10q loss,4q gain,302,244.2,0,0.306485337917976,neutral
  2313. 17q loss,3q gain,146,118.1,0.0016585,0.305959381026186,neutral
  2314. 2p gain,6q loss,122,98.7,0.00541322453573438,0.305759130077835,neutral
  2315. 6q gain,8p gain,22,17.8,0.249226443551986,0.305626127825982,neutral
  2316. 12q gain,7p gain,388,314.1,0,0.304832700674313,neutral
  2317. 2p loss,8q gain,324,262.3,0,0.304775995032911,neutral
  2318. 16q gain,3q gain,175,141.7,0.000516666666666667,0.30451514442805,neutral
  2319. 3q loss,4p loss,169,136.9,0.000754326982175784,0.30390077989509,neutral
  2320. 13q gain,3p loss,111,137,0.0367559459459459,-0.303616191944104,neutral
  2321. 12q gain,8p loss,233,188.8,2.27347498286498e-05,0.303471175684112,neutral
  2322. 11p gain,11q loss,47,58,0.529566260869565,-0.303392085234079,neutral
  2323. 11p gain,17p gain,29,23.5,0.196384575342466,0.303392027018245,neutral
  2324. PIK3CA,20q gain,96,77.8,0.0119289281828074,0.303264215466684,neutral
  2325. 11q loss,2p gain,45,55.5,0.559085431754875,-0.302562709366598,neutral
  2326. 1q loss,8p gain,3,3.7,1,-0.302561860215494,neutral
  2327. 4p gain,8p loss,91,73.8,0.0119173652694611,0.302245692076451,neutral
  2328. 16p loss,8p gain,36,29.2,0.141275599812559,0.302028444124665,neutral
  2329. TP53,17p loss,845,685.4,0,0.302005145562099,neutral
  2330. 12q loss,4q gain,179,145.4,0.000676102532427424,0.299932299607021,neutral
  2331. EGFR 19del,12q loss,291,236.4,0,0.299789106167554,neutral
  2332. EGFR L858R,14q gain,326,264.9,0,0.299424110541393,neutral
  2333. 3q loss,6q gain,56,68.9,0.409096666666667,-0.299077107524919,neutral
  2334. 13q loss,5q gain,263,213.8,0,0.298800933835779,neutral
  2335. ERBB2,14q gain,77,62.6,0.0267265326370757,0.298695745550177,neutral
  2336. 16q gain,9p gain,37,45.5,0.73428614213198,-0.298341201728019,neutral
  2337. 13q loss,17p gain,90,73.2,0.0132249918962723,0.298081316142962,neutral
  2338. 7p gain,7q loss,253,205.8,0,0.297894389609424,neutral
  2339. 20q loss,4p gain,22,17.9,0.264432888198758,0.297543786056069,neutral
  2340. ROS1,6p gain,14,17.2,1,-0.296981546036984,neutral
  2341. TP53,7p loss,50,40.7,0.0347601082474227,0.296899234464337,neutral
  2342. 18q gain,7p gain,171,139.2,0,0.296837094650779,neutral
  2343. 3p loss,3q gain,417,339.5,0,0.296635801302236,neutral
  2344. EGFR 19del,1p gain,232,188.9,6.61635638297872e-05,0.296502089438216,neutral
  2345. 20q gain,8q loss,77,62.7,0.0278289213131839,0.29639296004832,neutral
  2346. 20q loss,8p gain,14,11.4,0.353659635099913,0.296392767754904,neutral
  2347. 5p loss,9p gain,14,11.4,0.351385673913043,0.296392767754904,neutral
  2348. ERBB2,1q loss,7,5.7,0.466959272575251,0.296392532729957,neutral
  2349. KRAS,20q gain,108,132.6,0.0527015736040609,-0.296049438279416,neutral
  2350. 20q loss,2q gain,55,44.8,0.0856850957290133,0.295932826632476,neutral
  2351. 4q gain,7p loss,11,13.5,1,-0.295455640648419,neutral
  2352. ALK,22q loss,87,70.9,0.0153324638457418,0.295229735840515,neutral
  2353. 16q gain,5p loss,20,16.3,0.280110376106195,0.295127871802277,neutral
  2354. KRAS,17p loss,126,154.6,0.0221133333333333,-0.295116564355884,neutral
  2355. 11q gain,6p loss,126,102.7,0.00668959217877095,0.294987526092057,neutral
  2356. mut_Negative,20q gain,227,278.5,0.000301545454545455,-0.294985018296605,neutral
  2357. 1q loss,5p gain,65,53,0.0167792864749734,0.294447308211736,neutral
  2358. BRAF,8q gain,57,69.9,0.198364466403162,-0.294330489613087,neutral
  2359. EGFR L858R,10q loss,406,331.1,0,0.294212708637111,neutral
  2360. EGFR 19del,3p loss,401,327.1,0,0.29387046913131,neutral
  2361. 5q gain,8p loss,259,211.3,2.27347498286498e-05,0.293659318064391,neutral
  2362. 12q gain,3p loss,207,168.9,0.00017153199741435,0.293461423863602,neutral
  2363. 11p gain,13q loss,188,153.4,0.000275357598978289,0.293434161753249,neutral
  2364. 11p loss,6p gain,221,180.4,0.000150772727272727,0.292847016331723,neutral
  2365. 18q gain,9p loss,64,78.4,0.259731877256318,-0.292781707823976,neutral
  2366. ROS1,19p loss,32,39.2,0.628531266846361,-0.292781666420118,neutral
  2367. ALK,10q loss,61,74.7,0.2534188,-0.292298956963477,neutral
  2368. 17q gain,4p loss,313,255.6,0,0.292274810522012,neutral
  2369. MET,6p loss,12,9.8,0.379505923374946,0.292180481601631,neutral
  2370. ROS1,4p gain,6,4.9,0.498071929606625,0.292180211710452,neutral
  2371. EGFR L858R,15q loss,413,337.3,0,0.292109455448899,neutral
  2372. TP53,1p loss,368,300.7,0,0.291380889596156,neutral
  2373. BRAF,1p gain,21,25.7,1,-0.291378905890109,neutral
  2374. 11p gain,4p loss,140,114.4,0.00363064183381089,0.29133975199388,neutral
  2375. 14q loss,6p gain,99,80.9,0.0192480922098569,0.291288789933109,neutral
  2376. 14q loss,15q gain,29,23.7,0.212870878623188,0.291165729865682,neutral
  2377. 12q loss,19p gain,39,47.7,0.678501078947368,-0.290515074785902,neutral
  2378. 12q loss,3q gain,300,245.3,0,0.290415256101981,neutral
  2379. ERBB2,1p loss,39,31.9,0.148747442943642,0.289917617651072,neutral
  2380. 14q gain,1q loss,39,31.9,0.123585,0.289917617651072,neutral
  2381. 16q loss,9q gain,49,59.9,0.517647117647059,-0.289774200209257,neutral
  2382. 3p gain,6p loss,32,39.1,0.892150714285714,-0.289096620553527,neutral
  2383. 4q loss,7q gain,371,303.7,0,0.288772269723412,neutral
  2384. EGFR 19del,17q loss,139,113.8,0.0039267842914058,0.288584302320692,neutral
  2385. TP53,5p gain,1196,979.2,0,0.288541923722078,neutral
  2386. EGFR 19del,1q gain,578,473.3,0,0.28831456512818,neutral
  2387. 10q loss,18q gain,111,90.9,0.00615429932735426,0.288207448303564,neutral
  2388. 3q loss,8q gain,311,254.7,0,0.288115610489764,neutral
  2389. 2p gain,9p loss,166,136,0.00106740133576199,0.287576570925409,neutral
  2390. ALK,14q gain,49,59.8,0.480113202416918,-0.287363682021336,neutral
  2391. 12q gain,5q loss,149,122.1,0.00341035611717404,0.287249109030451,neutral
  2392. PIK3CA,16q gain,41,33.6,0.144026,0.287162599230022,neutral
  2393. 21q gain,2q loss,61,50,0.0740944526993561,0.286881095756547,neutral
  2394. MET,2p gain,10,8.2,0.430270300211416,0.286303868467837,neutral
  2395. ALK,13q loss,57,69.5,0.33069822147651,-0.2860510130364,neutral
  2396. 6q loss,9p gain,68,82.9,0.300467766323024,-0.285837317225371,neutral
  2397. 15q loss,5q gain,285,233.8,0,0.285686978322314,neutral
  2398. KRAS,6p gain,70,85.3,0.300257604166667,-0.285190782518567,neutral
  2399. 19q loss,1p gain,275,225.7,2.27347498286498e-05,0.285025188648272,neutral
  2400. 10q gain,5q loss,53,43.5,0.0921802390243903,0.284976899267062,neutral
  2401. 19q loss,22q gain,82,99.9,0.160736291666667,-0.284860736762474,neutral
  2402. ERBB2,20q gain,76,62.4,0.0350800462724936,0.284453348095872,neutral
  2403. TP53,6q gain,314,257.9,0,0.283952775995383,neutral
  2404. PIK3CA,9q loss,103,84.6,0.0124297559652928,0.283914738486785,neutral
  2405. 11q gain,21q loss,32,26.3,0.184893446535108,0.283009007884047,neutral
  2406. PIK3CA,11p gain,24,29.2,1,-0.28293385622225,neutral
  2407. 17p gain,8p gain,6,7.3,1,-0.282933535074991,neutral
  2408. EGFR 19del,16q gain,166,136.5,0.00186128174837566,0.282282271644469,neutral
  2409. 4q loss,9q gain,76,62.5,0.044524281361097,0.282143187778593,neutral
  2410. 4p gain,5q loss,58,47.7,0.0822714039408867,0.282063580298167,neutral
  2411. 11p loss,16q gain,147,120.9,0.00413209897610922,0.28200188928751,neutral
  2412. 4p loss,5p loss,40,32.9,0.135614569411765,0.281912338204134,neutral
  2413. 14q loss,17q gain,128,105.3,0.00757381666666667,0.281638349564121,neutral
  2414. 11q gain,13q loss,343,282.2,0,0.28149057940085,neutral
  2415. 17q gain,19p loss,522,429.5,0,0.281391669479151,neutral
  2416. 11q gain,16q loss,219,180.2,0.000295031766200762,0.281331844490716,neutral
  2417. 10q loss,5q gain,279,229.6,0,0.281142468915212,neutral
  2418. 16p loss,4q gain,170,139.9,0.00202683901292597,0.281138765601421,neutral
  2419. mut_Negative,17p gain,41,49.8,0.687799921465969,-0.280521770383609,neutral
  2420. 11q gain,1p loss,150,123.5,0.00429458262350937,0.280451438273462,neutral
  2421. 10q loss,8p gain,42,51,0.548329915730337,-0.28010785857531,neutral
  2422. 21q gain,5p loss,7,8.5,1,-0.280107555488577,neutral
  2423. 11p gain,22q loss,190,156.5,0.000456372732958099,0.279836745144662,neutral
  2424. 11p loss,2p gain,122,100.5,0.0103644865458539,0.279685621085906,neutral
  2425. 1q gain,4p gain,116,95.6,0.00376759703196347,0.279042255494928,neutral
  2426. 11p loss,19p gain,62,51.1,0.0726025222993062,0.278944874701577,neutral
  2427. 1p loss,22q gain,39,47.3,0.769088725490196,-0.278365994677517,neutral
  2428. 10q gain,3p loss,73,60.2,0.042357617107943,0.278132934986802,neutral
  2429. 18q gain,19p gain,16,13.2,0.353150221642764,0.277533784262653,neutral
  2430. 3p gain,5p loss,12,9.9,0.405186267064846,0.277533720507293,neutral
  2431. 19q loss,6p gain,295,243.4,0,0.277385776055156,neutral
  2432. 15q loss,16q gain,234,193.2,6.61635638297872e-05,0.276413422614972,neutral
  2433. EGFR 19del,7p gain,736,608.2,0,0.275159945794678,neutral
  2434. KRAS,4p gain,20,24.2,1,-0.275006922307382,neutral
  2435. 11q loss,8q gain,303,250.6,0,0.273931369082516,neutral
  2436. 17q gain,1q loss,22,26.6,1,-0.273922608572661,neutral
  2437. 19q gain,5q gain,59,48.8,0.0957725352112676,0.27383375557668,neutral
  2438. PIK3CA,6p loss,40,33.1,0.16575803142329,0.273168707781759,neutral
  2439. ROS1,9p loss,24,29,1,-0.27301839076457,neutral
  2440. 17p gain,2p loss,24,29,1,-0.27301839076457,neutral
  2441. 1p gain,7p loss,12,14.5,1,-0.273018287122804,neutral
  2442. EGFR L858R,4q gain,177,146.6,0.00209617320070216,0.271864239934441,neutral
  2443. 20q gain,21q loss,46,38.1,0.114605993314231,0.27184279842031,neutral
  2444. 19q loss,8p gain,53,43.9,0.0850776253687316,0.271771363489699,neutral
  2445. TP53,11p gain,266,220.4,0,0.271302010596018,neutral
  2446. 11q loss,3q gain,175,145,0.00184277777777778,0.271302004760902,neutral
  2447. 3q loss,6p gain,122,101.1,0.0142616702586207,0.271098126101122,neutral
  2448. 16p loss,7p gain,584,484.1,0,0.270663269808615,neutral
  2449. 17q loss,20q gain,152,126,0.0037843696520251,0.270647570358211,neutral
  2450. 12q gain,15q loss,252,208.9,4.47638326585695e-05,0.27061122950846,neutral
  2451. 22q gain,4q gain,62,51.4,0.0898962121212121,0.270499808093147,neutral
  2452. KRAS,16q loss,82,98.9,0.252769927007299,-0.270346581189368,neutral
  2453. 14q gain,16p loss,305,252.9,2.27347498286498e-05,0.270242195929782,neutral
  2454. 17p loss,6p gain,317,262.9,0,0.269968689043419,neutral
  2455. TP53,19p loss,1037,860.3,0,0.269504148412847,neutral
  2456. TP53,14q loss,254,210.8,0,0.268953618382288,neutral
  2457. MET,9p loss,30,24.9,0.190111833180568,0.268816659930584,neutral
  2458. ERBB2,6p loss,22,26.5,1,-0.268488724568698,neutral
  2459. EGFR 19del,21q gain,86,71.4,0.0367573244490005,0.268412551257473,neutral
  2460. ROS1,19q loss,24,28.9,1,-0.268034984971702,neutral
  2461. 1p gain,5q loss,188,156.2,0.00169395486935867,0.267338192800081,neutral
  2462. PIK3CA,14q gain,94,78.1,0.0265671943573668,0.267338177177143,neutral
  2463. 18q loss,3q gain,416,345.7,0,0.267062917713652,neutral
  2464. EGFR 19del,6q gain,167,138.8,0.00302066858789625,0.266840517231514,neutral
  2465. 11q gain,4q loss,226,188,0.000456372732958099,0.265590097834517,neutral
  2466. 17q gain,6p loss,150,124.8,0.00585462619449129,0.265344547100101,neutral
  2467. EGFR 19del,4q loss,296,246.3,2.27347498286498e-05,0.265180538182341,neutral
  2468. ERBB2,5q loss,56,46.6,0.102002543352601,0.2650968203236,neutral
  2469. TP53,7p gain,1357,1129.8,0,0.264353312832863,neutral
  2470. 11q gain,14q loss,104,86.6,0.0276704900938478,0.264144570429449,neutral
  2471. KRAS,13q loss,129,154.9,0.0491534715025907,-0.263966059779316,neutral
  2472. ERBB2,8p loss,60,72,0.409096666666667,-0.263034365758938,neutral
  2473. 11q gain,8q loss,36,43.2,0.891606535796767,-0.263034339042374,neutral
  2474. ROS1,10q loss,28,33.6,0.946320588235294,-0.263034319959117,neutral
  2475. ERBB2,11q loss,33,27.5,0.219588100407056,0.26303431839776,neutral
  2476. BRAF,4q gain,20,24,1,-0.263034285609262,neutral
  2477. KRAS,21q loss,12,14.4,1,-0.263034205459636,neutral
  2478. RET,8p loss,10,12,1,-0.263034165384841,neutral
  2479. MET,5p loss,3,2.5,0.603920008016032,0.263033444040627,neutral
  2480. 2p gain,9q loss,164,136.7,0.00280093695777906,0.262682554331286,neutral
  2481. EGFR 19del,12q gain,177,147.6,0.00257370005790388,0.262056622674593,neutral
  2482. 17p gain,6q loss,59,49.2,0.0969572265246854,0.262056590203857,neutral
  2483. 1p loss,20q gain,215,179.3,0.000617690875232775,0.261961158247909,neutral
  2484. 1p gain,8p gain,29,24.2,0.243405114196149,0.261045754066451,neutral
  2485. 19p gain,9p gain,23,19.2,0.303060465524813,0.260527426078325,neutral
  2486. 11p loss,17p gain,60,50.1,0.0958387572815534,0.260151849786773,neutral
  2487. 1p loss,2p gain,77,64.3,0.0667360597014925,0.260039671247945,neutral
  2488. 15q gain,16p loss,57,47.6,0.105442326923077,0.26000029576137,neutral
  2489. 11q gain,12q loss,216,180.4,0.000872894736842105,0.259831960614879,neutral
  2490. PIK3CA,4p gain,17,14.2,0.358937037678649,0.259643649294846,neutral
  2491. ERBB2,4p loss,65,54.3,0.0803381984205331,0.259487476374852,neutral
  2492. ERBB2,6p gain,48,40.1,0.142401170411985,0.259432109940754,neutral
  2493. 19p gain,8q gain,124,103.6,0.0036665578465063,0.259316094677782,neutral
  2494. 18q gain,2p loss,28,33.5,1,-0.258734183807203,neutral
  2495. KRAS,16p loss,114,95.3,0.0229288935721812,0.258485680309782,neutral
  2496. ALK,2p loss,23,27.5,1,-0.257797654825353,neutral
  2497. MET,11p loss,22,18.4,0.287731826202029,0.257797629164792,neutral
  2498. 18q loss,2p gain,158,132.2,0.00449157507082153,0.257202363736857,neutral
  2499. 18q loss,3p gain,81,96.8,0.267136964285714,-0.257085110430856,neutral
  2500. 11q loss,2q gain,59,70.5,0.569662679558011,-0.25690826314997,neutral
  2501. BRAF,19q loss,39,46.6,0.773858533007335,-0.256855770574089,neutral
  2502. TP53,9p loss,760,636.2,0,0.256519042984873,neutral
  2503. ERBB2,7q loss,16,19.1,1,-0.255500586801788,neutral
  2504. 14q loss,7q gain,167,139.9,0.00322539125431531,0.255452123462282,neutral
  2505. BRAF,16p loss,37,31,0.193999757658893,0.255256979774179,neutral
  2506. 10q gain,16p loss,50,41.9,0.135398596325954,0.25497779518313,neutral
  2507. 6q gain,9q gain,42,35.2,0.18242738171796,0.254813832671116,neutral
  2508. 5q gain,8q loss,39,32.7,0.195155975331201,0.25418341698221,neutral
  2509. ALK,19p gain,13,10.9,0.407369944680851,0.254183274443693,neutral
  2510. 17q loss,18q gain,31,26,0.248641727678571,0.253756502748604,neutral
  2511. RET,1q gain,13,15.5,1,-0.253756413251488,neutral
  2512. ROS1,7q gain,25,29.8,1,-0.253384142847945,neutral
  2513. ALK,7p gain,96,114.4,0.0562884848484849,-0.252980716998846,neutral
  2514. 11p gain,19p loss,229,192.2,0.000150772727272727,0.252739250148163,neutral
  2515. 14q loss,16p gain,77,91.7,0.374810195439739,-0.252063257977505,neutral
  2516. RET,8q gain,20,16.8,0.259716237227899,0.251538629596512,neutral
  2517. 15q gain,17q loss,20,23.8,1,-0.250961458360138,neutral
  2518. 18q gain,3p loss,63,74.9,0.480113202416918,-0.249613853688425,neutral
  2519. 5q loss,8p gain,36,30.3,0.208049945553539,0.248679037468392,neutral
  2520. ALK,17q gain,42,49.9,0.826011976190476,-0.248650433289573,neutral
  2521. 17p gain,8p loss,86,72.4,0.0408116106014271,0.248346930994225,neutral
  2522. 4q gain,8p loss,267,224.8,0.000150772727272727,0.248197696210687,neutral
  2523. 5p loss,7q gain,50,42.1,0.119427795238095,0.248107807451803,neutral
  2524. TP53,22q loss,832,700.7,0,0.247786628885602,neutral
  2525. 1p loss,2q gain,97,81.7,0.0468943601416287,0.247648641075797,neutral
  2526. ALK,12q gain,33,27.8,0.235761467025572,0.2473810597476,neutral
  2527. BRAF,2q loss,23,27.3,1,-0.247266991176525,neutral
  2528. 10q gain,7q loss,15,17.8,1,-0.246914589176748,neutral
  2529. ERBB2,13q gain,28,23.6,0.27497768481629,0.246639871519933,neutral
  2530. ERBB2,15q gain,14,11.8,0.405186267064846,0.246639775456817,neutral
  2531. MET,1p loss,14,11.8,0.396451017964072,0.246639775456817,neutral
  2532. mut_Negative,18q loss,247,293,0.00208944881889764,-0.246389613667603,neutral
  2533. TP53,1q gain,1043,879.3,0,0.246311781421285,neutral
  2534. 1q loss,5q gain,14,16.6,1,-0.245756252999005,neutral
  2535. 4q gain,9q loss,251,211.7,0.000335686274509804,0.245666084160347,neutral
  2536. PIK3CA,1p gain,55,46.4,0.137293872180451,0.245306764666993,neutral
  2537. 13q gain,7p gain,302,254.8,0,0.245183263106816,neutral
  2538. 4q gain,6p loss,98,82.7,0.0487163434343434,0.24489439259586,neutral
  2539. 12q gain,19q loss,209,176.4,0.0014326574685063,0.244652368653763,neutral
  2540. EGFR 19del,8p loss,433,365.5,0,0.244495612621059,neutral
  2541. EGFR 19del,20q gain,375,316.6,0,0.244229333036908,neutral
  2542. ERBB2,22q loss,88,74.3,0.0405486326530612,0.244141282757078,neutral
  2543. 13q gain,22q loss,187,158,0.00235412449098313,0.243113697550189,neutral
  2544. 17q loss,1p gain,89,75.2,0.0611349125437281,0.243072644428948,neutral
  2545. 2p gain,5q loss,111,93.8,0.0337185478036176,0.242899824889179,neutral
  2546. 15q gain,5p loss,6,7.1,1,-0.242856151369848,neutral
  2547. 2q gain,6q loss,106,125.4,0.210540877862595,-0.242473062295625,neutral
  2548. 12q gain,16p loss,139,117.5,0.0165672998932764,0.242424107166963,neutral
  2549. EGFR L858R,5q gain,163,137.8,0.00854044850498339,0.242296060228197,neutral
  2550. KRAS,19q loss,121,143.1,0.122159118942731,-0.242016606150981,neutral
  2551. 18q gain,8q loss,11,13,1,-0.241007897728434,neutral
  2552. 22q gain,9q loss,119,100.7,0.0205997621564482,0.240897868156763,neutral
  2553. EGFR L858R,7p gain,599,507.1,0,0.24028572424466,neutral
  2554. 5q gain,7p loss,15,12.7,0.392769734475375,0.240133829540188,neutral
  2555. mut_Negative,15q gain,62,52.5,0.114605993314231,0.239950750614453,neutral
  2556. 17q gain,22q loss,413,349.8,0,0.239611486073813,neutral
  2557. PIK3CA,4q gain,51,43.2,0.160101353104727,0.239465883619595,neutral
  2558. MET,10q loss,34,28.8,0.197325182481752,0.239465858081707,neutral
  2559. ERBB2,12q loss,55,46.6,0.136377690498589,0.23910161647473,neutral
  2560. 2p gain,6p loss,63,53.4,0.125729049195837,0.238512045531334,neutral
  2561. PIK3CA,9q gain,21,17.8,0.349937007394519,0.238511963194596,neutral
  2562. 2p gain,4p gain,27,22.9,0.298282136263736,0.237611713287588,neutral
  2563. 10q loss,22q gain,137,116.2,0.0107480240831965,0.237565805593369,neutral
  2564. 12q gain,9p gain,58,49.2,0.141706590163934,0.237394540185528,neutral
  2565. 16q gain,4q gain,99,84,0.0530619788519637,0.237039171278214,neutral
  2566. EGFR 19del,19p gain,68,57.7,0.0971682108317215,0.236963389619458,neutral
  2567. 1q loss,7p gain,72,61.1,0.0256503089005236,0.236824490764961,neutral
  2568. 17q gain,4q gain,192,163,0.0044025978445831,0.236234333121548,neutral
  2569. ALK,17p gain,9,10.6,1,-0.236067116272341,neutral
  2570. ALK,8q gain,82,96.5,0.226887732342007,-0.234905006213657,neutral
  2571. EGFR 19del,19q loss,402,341.6,0,0.234887520100275,neutral
  2572. EGFR 19del,9q loss,405,344.2,0,0.234674804326805,neutral
  2573. MET,7p gain,52,44.2,0.0602834467233617,0.234465204676794,neutral
  2574. MET,3p loss,28,23.8,0.254515109131403,0.2344651627109,neutral
  2575. PIK3CA,21q loss,10,8.5,0.468053234433765,0.234464999044057,neutral
  2576. MET,PIK3CA,6,5.1,0.544663560081466,0.234464829315722,neutral
  2577. 2p gain,4q loss,115,97.8,0.035282521828454,0.233727468816418,neutral
  2578. PIK3CA,9p loss,99,84.2,0.0405786996430393,0.233608266285897,neutral
  2579. 3q gain,8q loss,69,58.7,0.0975541082648623,0.23323582186744,neutral
  2580. 1q gain,21q loss,67,57,0.0646525486284289,0.233199138516262,neutral
  2581. 16p loss,5q gain,112,131.6,0.226249104477612,-0.232660737605502,neutral
  2582. 11p gain,8q loss,20,23.5,1,-0.232660649355588,neutral
  2583. 2p loss,8p gain,16,18.8,1,-0.232660622496931,neutral
  2584. 1q loss,3q gain,35,29.8,0.22431586036036,0.23204251944292,neutral
  2585. TP53,19p gain,126,107.3,0.00736086206896552,0.231773637676028,neutral
  2586. 15q gain,5q loss,58,49.4,0.137899328323156,0.231541815127259,neutral
  2587. 13q gain,17q loss,56,47.7,0.155954488847584,0.231437516111788,neutral
  2588. 19q gain,2q gain,50,42.6,0.180399048275862,0.23107461431446,neutral
  2589. EGFR 19del,11p loss,297,253.2,0.000234191270860077,0.2301855178569,neutral
  2590. 13q gain,16q loss,116,98.9,0.037729391926418,0.230082357751968,neutral
  2591. 6q loss,9q gain,74,63.1,0.0963746873485216,0.229885231856259,neutral
  2592. ERBB2,18q gain,11,12.9,1,-0.22986734872606,neutral
  2593. 1q loss,2q gain,17,14.5,0.390725808665809,0.229481699804905,neutral
  2594. 15q gain,7p gain,149,127.1,0.00150862956313585,0.229348283661079,neutral
  2595. MET,4q gain,15,12.8,0.405954443971027,0.228818525187194,neutral
  2596. RET,6q loss,7,8.2,1,-0.228268686064797,neutral
  2597. 6q gain,9p loss,142,166.3,0.101620818181818,-0.227897224049541,neutral
  2598. 15q gain,6p loss,24,28.1,1,-0.227535636904113,neutral
  2599. 3p gain,7q loss,24,28.1,1,-0.227535636904113,neutral
  2600. EGFR L858R,9q loss,336,287,6.61635638297872e-05,0.227410488772305,neutral
  2601. 22q gain,3p loss,112,95.7,0.0355186198050282,0.226907880519167,neutral
  2602. mut_Negative,11p gain,122,104.3,0.0349957150205761,0.226141969862504,neutral
  2603. TP53,21q gain,155,132.6,0.00375080525414049,0.225187424325582,neutral
  2604. EGFR 19del,10q loss,464,397.1,0,0.224622439252258,neutral
  2605. 11q gain,18q loss,297,254.2,0.000295031766200762,0.224498892504431,neutral
  2606. 16q gain,1q loss,16,13.7,0.411536466836735,0.223895860549265,neutral
  2607. 1q gain,6p loss,260,222.8,0.000295031766200762,0.222762381311137,neutral
  2608. KRAS,4p loss,99,115.5,0.33602652173913,-0.22239240051834,neutral
  2609. 17p gain,18q loss,77,66,0.0852640147420147,0.222392390109287,neutral
  2610. 4q gain,5p loss,18,21,1,-0.222392306836901,neutral
  2611. ERBB2,20q loss,15,17.5,1,-0.222392283937005,neutral
  2612. 16q gain,7p loss,9,10.5,1,-0.222392192337471,neutral
  2613. 18q gain,21q gain,19,16.3,0.392279343910806,0.221127328324139,neutral
  2614. 11p gain,6p loss,65,55.8,0.145010452425373,0.22017455949222,neutral
  2615. TP53,2q gain,312,267.9,2.27347498286498e-05,0.219851440295459,neutral
  2616. BRAF,17q gain,31,36.1,1,-0.219730555865972,neutral
  2617. 17q loss,8p gain,17,14.6,0.4063325,0.219566237754627,neutral
  2618. 1q gain,20q loss,171,146.9,0.00485917986425339,0.219161915375783,neutral
  2619. 17p gain,6q gain,32,27.5,0.287297598233996,0.218640212701187,neutral
  2620. 2q gain,6p loss,79,67.9,0.109750402684564,0.218441048965866,neutral
  2621. EGFR 19del,7q gain,410,352.4,0,0.218409979720946,neutral
  2622. EGFR 19del,13q gain,103,119.8,0.329131279461279,-0.217983551076023,neutral
  2623. TP53,7q loss,209,179.7,0.000949445797807552,0.217912522203244,neutral
  2624. 11p loss,12q gain,152,130.7,0.0214835232067511,0.217812167067487,neutral
  2625. EGFR 19del,21q loss,40,34.4,0.222969458483755,0.21759137635831,neutral
  2626. MET,12q loss,20,17.2,0.36360856525497,0.217591317644024,neutral
  2627. ERBB2,7p loss,5,4.3,0.581806349334409,0.217590965358978,neutral
  2628. 7p loss,8q loss,5,4.3,0.586720257752718,0.217590965358978,neutral
  2629. KRAS,7q gain,127,147.6,0.18149875,-0.216864208546401,neutral
  2630. 11p gain,12q loss,114,98.1,0.0507246875,0.216708762321349,neutral
  2631. 19p gain,1p loss,38,32.7,0.253682504456328,0.216708721298328,neutral
  2632. 13q loss,9q gain,109,93.8,0.0417539836984208,0.216668285700816,neutral
  2633. TP53,8q gain,1107,952.8,0,0.216409901695641,neutral
  2634. 1p loss,7p gain,400,344.3,0,0.216333813257281,neutral
  2635. TP53,EGFR 19del,617,531.1,0,0.216286956162088,neutral
  2636. 16q gain,4p loss,153,131.7,0.0203164055055585,0.216276292073252,neutral
  2637. 15q loss,17p gain,69,80.1,0.537753180515759,-0.215205851768685,neutral
  2638. 1p loss,1q gain,311,268,0.000109040105193951,0.214681572229834,neutral
  2639. 10q loss,12q gain,238,205.1,0.00169395486935867,0.214634071991838,neutral
  2640. 17p loss,2p gain,170,146.5,0.0106384046052632,0.214634068102392,neutral
  2641. 12q loss,7p loss,21,18.1,0.363924332613391,0.214399520511529,neutral
  2642. 11p gain,8p loss,176,151.7,0.00944055157198014,0.214354330147088,neutral
  2643. 10q loss,16q gain,220,189.7,0.00276416666666667,0.213783834526195,neutral
  2644. TP53,17p gain,122,105.2,0.0146847283485745,0.213746424273328,neutral
  2645. BRAF,5p gain,62,71.9,0.511214059701492,-0.213723523125313,neutral
  2646. 21q gain,6q loss,72,62.1,0.123119605887939,0.213403606165467,neutral
  2647. TP53,16q gain,294,253.7,8.76354029062087e-05,0.212692627864866,neutral
  2648. 12q loss,19q gain,81,69.9,0.104775079365079,0.212629424112913,neutral
  2649. 10q gain,9p loss,73,63,0.106736094049904,0.21254460401035,neutral
  2650. mut_Negative,1p loss,165,142.4,0.0181968189060011,0.21251686428999,neutral
  2651. mut_Negative,13q gain,122,105.3,0.046259883485309,0.212375692670149,neutral
  2652. 13q gain,19q gain,41,35.4,0.24998817573595,0.211874493758331,neutral
  2653. 13q loss,21q gain,107,92.4,0.0472228109201213,0.211646018567939,neutral
  2654. 13q gain,17p loss,179,154.6,0.00950848952590959,0.211419255506341,neutral
  2655. PIK3CA,17p loss,105,90.7,0.0502403329969728,0.211214850362195,neutral
  2656. PIK3CA,5q gain,47,40.6,0.221622964301853,0.21118098099262,neutral
  2657. 15q gain,8p loss,66,76.4,0.631208203753351,-0.211106584034209,neutral
  2658. TP53,9q gain,156,134.8,0.00618455207166853,0.21072551802335,neutral
  2659. ROS1,9p gain,7,8.1,1,-0.210566706052104,neutral
  2660. 11q loss,20q gain,179,154.7,0.0121142608695652,0.210486378042474,neutral
  2661. 15q gain,19p loss,112,96.8,0.0307761111111111,0.210419759443687,neutral
  2662. PIK3CA,12q gain,42,36.3,0.244977361359571,0.210419725732555,neutral
  2663. 13q gain,19p gain,28,24.2,0.328496079545455,0.210419698763657,neutral
  2664. 17p gain,9q loss,59,68.2,0.750833142144638,-0.209056751789253,neutral
  2665. 19q gain,6p loss,46,39.8,0.229013196942446,0.208865381543903,neutral
  2666. 2p gain,8q loss,26,22.5,0.344364383979103,0.208586535496365,neutral
  2667. RET,20q gain,9,10.4,1,-0.208586406023921,neutral
  2668. PIK3CA,13q loss,105,90.9,0.0535193860090589,0.208037107046582,neutral
  2669. mut_Negative,4p loss,210,242.5,0.0442854787234043,-0.207595410201183,neutral
  2670. PIK3CA,19q loss,97,84,0.0683018439363817,0.207595396390408,neutral
  2671. EGFR L858R,19q gain,61,70.4,0.805926082725061,-0.206766154607943,neutral
  2672. 15q loss,4q gain,287,248.7,0.000714870689655172,0.206644221604813,neutral
  2673. PIK3CA,9p gain,27,23.4,0.346062119234117,0.206450795262614,neutral
  2674. 10q gain,8q loss,12,10.4,0.480605658333333,0.20645069250669,neutral
  2675. EGFR L858R,14q loss,82,94.6,0.576865592286501,-0.206216250400293,neutral
  2676. RET,5p gain,15,17.3,1,-0.205809409271999,neutral
  2677. 11q loss,5q gain,70,80.7,0.736692297979798,-0.205213724118783,neutral
  2678. EGFR 19del,PIK3CA,81,70.3,0.108975779376499,0.204397191590176,neutral
  2679. PIK3CA,1q gain,134,116.3,0.0205162592592593,0.204381887486282,neutral
  2680. 16p gain,19q loss,318,276,0.000516666666666667,0.204358491602396,neutral
  2681. EGFR L858R,9p loss,329,285.6,0.00039637106918239,0.204091597929885,neutral
  2682. 14q loss,2q gain,66,57.3,0.164101789181692,0.203930852299835,neutral
  2683. 21q gain,9q loss,99,86,0.0704204365079365,0.203091843349049,neutral
  2684. 18q gain,4q loss,49,56.4,1,-0.202913374765664,neutral
  2685. 20q loss,3q gain,106,92.1,0.0692895429706905,0.202791182818121,neutral
  2686. EGFR 19del,17q gain,305,265.1,0.000949445797807552,0.202272565351043,neutral
  2687. 19q loss,2p gain,156,135.6,0.0234983263157895,0.202188836700279,neutral
  2688. 11q loss,6q gain,78,67.8,0.136812604607428,0.202188822787294,neutral
  2689. 13q gain,1p loss,78,67.8,0.135614569411765,0.202188822787294,neutral
  2690. 19p loss,19q gain,119,136.9,0.214851136363636,-0.202160857210847,neutral
  2691. 2q loss,3q gain,239,207.8,0.00469298245614035,0.201814954900613,neutral
  2692. EGFR L858R,7q gain,338,293.9,0.000335686274509804,0.201697881113543,neutral
  2693. 16p loss,4p gain,40,46,1,-0.201633814125258,neutral
  2694. KRAS,21q gain,26,29.9,1,-0.201633788793671,neutral
  2695. 21q gain,8p gain,8,9.2,1,-0.201633625947908,neutral
  2696. 15q loss,22q gain,136,118.3,0.0291661290322581,0.201156561926189,neutral
  2697. 5p loss,9q gain,10,8.7,0.501337720314439,0.200912478351107,neutral
  2698. EGFR 19del,20q loss,102,88.8,0.0789364098765432,0.199937549483787,neutral
  2699. mut_Negative,5q loss,181,207.9,0.108246741071429,-0.199900050574595,neutral
  2700. 11p gain,9q loss,164,142.8,0.0210508658922914,0.199699822416492,neutral
  2701. 16p loss,22q gain,58,66.6,0.907306009174312,-0.199469244936685,neutral
  2702. 13q gain,9p loss,125,143.5,0.277549681978799,-0.199122627134238,neutral
  2703. ERBB2,8q gain,88,101,0.361814868421053,-0.198779843012975,neutral
  2704. EGFR L858R,4p gain,42,48.2,1,-0.198643774379354,neutral
  2705. ROS1,2q gain,14,12.2,0.460776380033557,0.198545527341736,neutral
  2706. EGFR 19del,18q gain,57,65.4,0.883710511627907,-0.198328683937163,neutral
  2707. BRAF,19p loss,55,63.1,0.750833142144638,-0.198208352898642,neutral
  2708. 14q loss,1p gain,86,75,0.122721121140143,0.197446039602119,neutral
  2709. 2q gain,5p loss,15,17.2,1,-0.197445941185786,neutral
  2710. ALK,19q loss,56,64.2,0.855567981220657,-0.197146437272082,neutral
  2711. 18q gain,5q loss,62,54.1,0.179886982520699,0.196639587468265,neutral
  2712. BRAF,PIK3CA,11,9.6,0.49632657273104,0.196397021537302,neutral
  2713. EGFR L858R,19p loss,442,386.1,2.27347498286498e-05,0.195071810611256,neutral
  2714. ERBB2,9p loss,59,67.5,0.848103702830189,-0.19417251689701,neutral
  2715. 14q loss,16q gain,62,54.2,0.196431195801004,0.193975330433223,neutral
  2716. EGFR 19del,9p gain,109,95.3,0.0780856577645895,0.193779996727113,neutral
  2717. EGFR L858R,1q loss,21,24,1,-0.192644992067729,neutral
  2718. 1q loss,6q gain,16,14,0.441800337410375,0.192644949130425,neutral
  2719. MET,7q loss,8,7,0.546576285598047,0.192644820318627,neutral
  2720. PIK3CA,19p loss,130,113.8,0.032775119047619,0.19201104981117,neutral
  2721. mut_Negative,2p gain,114,99.8,0.0788340879881364,0.191922085708421,neutral
  2722. ROS1,7p gain,45,51.4,0.754699603960396,-0.19184331805792,neutral
  2723. 22q loss,4p gain,87,76.2,0.100262045344911,0.19122437973973,neutral
  2724. mut_Negative,4p gain,58,50.8,0.19953379498861,0.191224367988213,neutral
  2725. ROS1,3q gain,22,25.1,1,-0.190183759434575,neutral
  2726. EGFR 19del,8q gain,585,512.9,0,0.189759049914072,neutral
  2727. 4p gain,8q loss,13,11.4,0.489712072259136,0.189477643107291,neutral
  2728. EGFR 19del,22q loss,430,377.2,6.61635638297872e-05,0.189006979105291,neutral
  2729. EGFR L858R,2p gain,83,94.6,0.693132694300518,-0.188728825791192,neutral
  2730. 17p loss,8p gain,54,47.4,0.192571120768527,0.188072310952285,neutral
  2731. ALK,3p loss,54,61.5,0.977285101123596,-0.187626970594588,neutral
  2732. 15q gain,7q loss,23,20.2,0.401851503630927,0.187278481245869,neutral
  2733. PIK3CA,3q gain,83,72.9,0.131521085930123,0.187192497825478,neutral
  2734. 11p gain,15q loss,191,167.8,0.0146747793326157,0.186829912040002,neutral
  2735. 21q gain,4q loss,70,61.5,0.173159940064546,0.186768483120463,neutral
  2736. ERBB2,1q gain,82,93.3,0.539577897727273,-0.186253150037589,neutral
  2737. 2q loss,9p gain,76,66.8,0.161872671296296,0.186151289712883,neutral
  2738. EGFR L858R,18q gain,48,54.6,1,-0.185866508979735,neutral
  2739. ALK,7q loss,16,18.2,1,-0.18586643631658,neutral
  2740. 3p loss,9q gain,73,83,0.75938824691358,-0.185214848656132,neutral
  2741. 3p gain,4q loss,63,71.6,0.942178772727273,-0.18460773137149,neutral
  2742. 13q gain,16p gain,110,96.8,0.0955128377065112,0.18442455325278,neutral
  2743. 13q gain,16q gain,65,57.2,0.203411478616924,0.184424540871103,neutral
  2744. 5p loss,8p gain,5,4.4,0.596513827309237,0.184424177675984,neutral
  2745. 4p gain,5p gain,121,106.5,0.0354857700205339,0.18415360081543,neutral
  2746. EGFR L858R,9p gain,70,79.5,0.868218951048951,-0.183599913711175,neutral
  2747. EGFR 19del,16q loss,268,236.1,0.00570867266591676,0.182834951843143,neutral
  2748. 16q gain,17p loss,200,176.2,0.0162483386752137,0.18278606599816,neutral
  2749. 10q loss,2p gain,179,157.7,0.021074765171504,0.182776916475082,neutral
  2750. ERBB2,21q gain,16,14.1,0.460702183956321,0.182376620985078,neutral
  2751. 10q loss,4p gain,91,80.2,0.103325028873917,0.182264287281895,neutral
  2752. 15q gain,6q loss,59,52,0.211234984126984,0.182203298303984,neutral
  2753. 14q loss,19q gain,38,33.5,0.321863780113885,0.181838271987181,neutral
  2754. 20q gain,6p loss,169,149,0.0338724638429752,0.181710904361423,neutral
  2755. ALK,18q loss,71,62.6,0.163794135060129,0.181656340193448,neutral
  2756. EGFR 19del,6p gain,231,203.7,0.0121731378935939,0.181446862967364,neutral
  2757. KRAS,6q loss,118,104.1,0.0897082974559687,0.18081677462466,neutral
  2758. 16q gain,22q loss,159,180.2,0.218772921348315,-0.180572234967052,neutral
  2759. 17p loss,9q gain,106,93.6,0.0896710279001468,0.179483811836379,neutral
  2760. KRAS,4q gain,65,73.6,0.981075100671141,-0.179266022206464,neutral
  2761. ALK,19q gain,18,15.9,0.450204189473684,0.178970035187255,neutral
  2762. ALK,8q loss,12,10.6,0.512566517269737,0.178969982258271,neutral
  2763. MET,2p loss,12,10.6,0.507302663917526,0.178969982258271,neutral
  2764. 17p gain,7q gain,79,69.8,0.143033013570426,0.178625592784608,neutral
  2765. EGFR 19del,19p loss,524,463.1,0,0.178243051100476,neutral
  2766. 17p gain,5q gain,37,32.7,0.327885522518583,0.178234583744679,neutral
  2767. 15q gain,9p loss,81,71.6,0.141155222691045,0.177962297124512,neutral
  2768. 14q loss,5q gain,58,65.6,1,-0.177642885785654,neutral
  2769. MET,16p gain,19,16.8,0.431392252747253,0.177538086118375,neutral
  2770. 14q loss,21q gain,32,28.3,0.362761007785467,0.177269793111467,neutral
  2771. EGFR L858R,17q gain,250,221.1,0.0102972802197802,0.177229062190232,neutral
  2772. BRAF,6q loss,30,33.9,1,-0.176322717315892,neutral
  2773. 4p loss,8p gain,40,35.4,0.295452220756376,0.176250592824528,neutral
  2774. 19q gain,1p loss,54,47.8,0.257189177412183,0.175948754416791,neutral
  2775. 1q gain,7p loss,41,36.3,0.243786136974038,0.175654315949896,neutral
  2776. 4p gain,9p gain,17,19.2,1,-0.175571467343034,neutral
  2777. 2p loss,9p gain,55,48.7,0.256045238095238,0.175509812396594,neutral
  2778. EGFR 19del,3q gain,335,296.7,0.00206218181818182,0.175156163193048,neutral
  2779. 10q loss,11p gain,186,164.8,0.0241410667367315,0.174586368834251,neutral
  2780. 13q gain,17p gain,21,23.7,1,-0.174497652966618,neutral
  2781. 3p loss,9p gain,123,109,0.0824432102412605,0.174330165497251,neutral
  2782. 14q loss,1q gain,212,187.9,0.0109841639344262,0.174099189302221,neutral
  2783. TP53,6p loss,282,250,0.00171161921708185,0.173767061188304,neutral
  2784. 2p gain,3q loss,50,56.4,1,-0.173767034994698,neutral
  2785. 17p loss,1p gain,275,243.8,0.00586997191011236,0.17373348596546,neutral
  2786. TP53,20q loss,186,164.9,0.0125643939393939,0.17371121263309,neutral
  2787. RET,22q loss,11,12.4,1,-0.172836448785139,neutral
  2788. EGFR 19del,7q loss,109,96.7,0.109999793962626,0.172740323351924,neutral
  2789. 5q gain,7q loss,63,55.9,0.231415487202515,0.172503516458326,neutral
  2790. 10q gain,19p loss,96,85.2,0.09695599031477,0.172180956333012,neutral
  2791. 7p gain,8p gain,88,78.1,0.0667197461423594,0.172180954601224,neutral
  2792. 17q loss,21q gain,32,28.4,0.368719322691976,0.172180918233688,neutral
  2793. ROS1,22q gain,8,7.1,0.555846746547522,0.172180746786939,neutral
  2794. EGFR L858R,19q loss,321,284.9,0.00294929561200924,0.172117669990939,neutral
  2795. KRAS,5p gain,196,220.8,0.0877939908256881,-0.171886509508158,neutral
  2796. 16p gain,3q gain,270,239.7,0.00871446349557522,0.171729491534682,neutral
  2797. 12q loss,3p gain,61,68.7,1,-0.17150082985975,neutral
  2798. ALK,1p loss,27,30.4,1,-0.171111856632016,neutral
  2799. 20q loss,9q gain,20,22.5,1,-0.169924921292626,neutral
  2800. PIK3CA,8p gain,8,9,1,-0.169924801068238,neutral
  2801. ROS1,10q gain,4,4.5,1,-0.169924600694636,neutral
  2802. mut_Negative,8q gain,401,451.1,0.00163131147540984,-0.16984504538135,neutral
  2803. 11q loss,22q gain,46,40.9,0.299040083479789,0.169532978894818,neutral
  2804. EGFR L858R,11q loss,131,116.5,0.0898590709046455,0.169236843176079,neutral
  2805. EGFR 19del,22q gain,94,83.6,0.143162898550725,0.169157795391138,neutral
  2806. mut_Negative,9p loss,268,301.3,0.0580058291457286,-0.168967666299769,neutral
  2807. PIK3CA,7p gain,168,149.5,0.0125532376827287,0.16831573795402,neutral
  2808. ALK,7q gain,59,66.3,1,-0.168293888939867,neutral
  2809. TP53,6q loss,519,461.9,0,0.168153988959873,neutral
  2810. 19p gain,7q gain,80,71.2,0.160810741083835,0.168122736519502,neutral
  2811. MET,5p gain,43,38.3,0.23684569955157,0.16699222649221,neutral
  2812. PIK3CA,4p loss,76,67.7,0.191702864988558,0.166843561483061,neutral
  2813. 13q loss,6q gain,160,179.6,0.300467766323024,-0.166715435126214,neutral
  2814. 11p gain,16q loss,110,98,0.124379639810427,0.166649853349768,neutral
  2815. EGFR L858R,11p gain,111,98.9,0.123935324798483,0.166517234576766,neutral
  2816. 12q loss,17q gain,246,219.2,0.0166026812366738,0.166410510095836,neutral
  2817. 22q loss,3p gain,123,109.6,0.0853198870333988,0.166410502925597,neutral
  2818. MET,11q loss,9,10.1,1,-0.166358211838745,neutral
  2819. 16q loss,8p gain,34,30.3,0.355065846354167,0.166216900849861,neutral
  2820. MET,19p loss,30,33.6,1,-0.163498680758073,neutral
  2821. 4p gain,6q gain,25,28,1,-0.163498670453115,neutral
  2822. RET,19q loss,10,11.2,1,-0.163498577708557,neutral
  2823. 17q loss,1q gain,211,188.4,0.0166115077250932,0.163444025779767,neutral
  2824. 10q loss,17p gain,88,78.6,0.14453196170014,0.162974191659687,neutral
  2825. ERBB2,9q gain,16,14.3,0.488957521829522,0.162056650915793,neutral
  2826. 2q gain,3q loss,64,71.6,1,-0.161887658449518,neutral
  2827. 12q gain,17p loss,213,190.5,0.0269203288100209,0.161062424732655,neutral
  2828. 16p gain,4p loss,249,222.7,0.0190120731707317,0.161044177325218,neutral
  2829. EGFR L858R,3p loss,305,272.8,0.00714487723214286,0.1609655927302,neutral
  2830. EGFR 19del,4p loss,308,275.6,0.00746739855475264,0.160354457371295,neutral
  2831. 13q loss,2p gain,164,146.8,0.0558827911646586,0.159843836355215,neutral
  2832. TP53,19q loss,709,634.7,0,0.159710782462061,neutral
  2833. 3q gain,9p loss,397,355.4,0.00145168465227818,0.15969532174801,neutral
  2834. ERBB2,9p gain,21,18.8,0.452895393352966,0.159656585595185,neutral
  2835. MET,17p loss,24,26.8,1,-0.15919853204539,neutral
  2836. BRAF,12q gain,18,20.1,1,-0.15919851111078,neutral
  2837. ERBB2,2p gain,25,22.4,0.425976324027073,0.158429295622242,neutral
  2838. MET,18q loss,27,24.2,0.395158737697903,0.157952297952782,neutral
  2839. 15q gain,19q loss,64,71.4,1,-0.15785214577877,neutral
  2840. mut_Negative,11q gain,214,191.9,0.0367894723360656,0.157256077329263,neutral
  2841. EGFR L858R,17p loss,343,307.6,0.00414860716316089,0.157153068257769,neutral
  2842. 16p gain,8p gain,33,29.6,0.382139505588994,0.156868798400224,neutral
  2843. 15q loss,4p gain,91,81.7,0.151087188081937,0.155530448893834,neutral
  2844. ROS1,8q gain,39,43.4,1,-0.154220881191285,neutral
  2845. TP53,mut_Negative,420,467.1,0.00343985185185185,-0.15334211378304,neutral
  2846. EGFR 19del,8p gain,33,36.7,1,-0.15331399452201,neutral
  2847. 12q loss,5q gain,152,136.7,0.0923975243664717,0.153058070101725,neutral
  2848. ERBB2,18q loss,59,65.6,1,-0.152980835767325,neutral
  2849. BRAF,6q gain,17,18.9,1,-0.152851402769986,neutral
  2850. 16p gain,19p loss,416,374.2,0.000930945698596705,0.152773965913723,neutral
  2851. 3p gain,8p loss,118,106.2,0.120481898192198,0.152003079860352,neutral
  2852. PIK3CA,18q loss,91,81.9,0.173718516812529,0.152003075829728,neutral
  2853. 11q gain,7q loss,82,73.8,0.216100298642534,0.152003073896339,neutral
  2854. 15q gain,4p loss,64,57.6,0.25534697239537,0.152003068398265,neutral
  2855. mut_Negative,5p loss,27,30,1,-0.152003040011919,neutral
  2856. 6p gain,8p gain,29,26.1,0.414582763157895,0.152003038169398,neutral
  2857. 13q gain,21q loss,16,14.4,0.502973336085879,0.152002993257961,neutral
  2858. ALK,10q gain,11,9.9,0.544663560081466,0.152002947718418,neutral
  2859. ERBB2,8p gain,8,7.2,0.58410484885127,0.152002893071003,neutral
  2860. PIK3CA,7p loss,6,5.4,0.603763159582999,0.152002826279772,neutral
  2861. RET,16q gain,5,4.5,0.624642079840319,0.152002772846829,neutral
  2862. MET,ROS1,2,1.8,0.687887570532915,0.152002291952035,neutral
  2863. 19p loss,22q gain,122,135.5,0.536551037463977,-0.151411692009253,neutral
  2864. 5q gain,9q loss,221,199,0.0347096080453842,0.151277931630863,neutral
  2865. ERBB2,3p loss,58,64.4,1,-0.151007763380132,neutral
  2866. 7q loss,9p gain,29,32.2,1,-0.151007738660589,neutral
  2867. 17p loss,3p gain,119,107.2,0.120803152639087,0.150656654392651,neutral
  2868. ALK,5p gain,110,99.1,0.0963746873485216,0.150546546799908,neutral
  2869. 10q gain,22q loss,77,69.4,0.204191504545455,0.149922762485868,neutral
  2870. EGFR 19del,9p loss,380,342.5,0.00355868617326449,0.149895426326235,neutral
  2871. 12q loss,4p gain,43,47.7,1,-0.149652573357375,neutral
  2872. ERBB2,7p gain,108,119.8,0.467850092307692,-0.149596582580377,neutral
  2873. EGFR L858R,21q gain,66,59.5,0.263122166000888,0.149576332170917,neutral
  2874. 11q gain,5q loss,200,180.4,0.0564039789262418,0.14880065356945,neutral
  2875. PIK3CA,7q gain,96,86.6,0.168850147669589,0.148667364569568,neutral
  2876. 15q loss,3p gain,106,117.5,0.712562678571429,-0.148596478681053,neutral
  2877. RET,15q loss,12,13.3,1,-0.14839172238001,neutral
  2878. 17q loss,9p gain,42,37.9,0.365457206390328,0.148191442335537,neutral
  2879. TP53,15q gain,123,111,0.0815838067061144,0.148098626308889,neutral
  2880. EGFR L858R,20q loss,82,74,0.222032249322493,0.148098619968767,neutral
  2881. ROS1,3p loss,25,27.7,1,-0.147957825137641,neutral
  2882. 8q loss,9q gain,13,14.4,1,-0.147557080520077,neutral
  2883. 4q loss,8p gain,35,31.6,0.385643994845361,0.147430319304759,neutral
  2884. EGFR L858R,2p loss,135,121.9,0.125631571225745,0.147261269833581,neutral
  2885. 10q loss,15q gain,75,83,1,-0.146220722310387,neutral
  2886. 1q loss,4q gain,16,17.7,1,-0.14567736859323,neutral
  2887. ALK,16p gain,48,43.4,0.337254853903184,0.145339331307301,neutral
  2888. 2q gain,9p loss,191,172.8,0.0613363336663337,0.144469412804118,neutral
  2889. 19p gain,3p loss,73,66.1,0.239058910802331,0.143246171629687,neutral
  2890. 15q loss,8p gain,47,51.9,1,-0.143073752812418,neutral
  2891. EGFR 19del,5q loss,261,236.4,0.0301012577962578,0.142819765527678,neutral
  2892. EGFR L858R,21q loss,26,28.7,1,-0.142539061445743,neutral
  2893. 17p gain,3q loss,31,28.1,0.424275603046974,0.141698037024219,neutral
  2894. 16p gain,3p gain,74,67.1,0.259718743339254,0.141212484268208,neutral
  2895. mut_Negative,9p gain,76,83.8,1,-0.140950807699424,neutral
  2896. 2q loss,9q gain,56,50.8,0.321248978965819,0.140598303801833,neutral
  2897. 13q gain,3q loss,54,59.5,1,-0.139930236448486,neutral
  2898. KRAS,19q gain,39,35.4,0.392409772824689,0.139724726047457,neutral
  2899. PIK3CA,2q gain,39,35.4,0.395158737697903,0.139724726047457,neutral
  2900. 11p gain,1p loss,61,67.2,1,-0.139651968507893,neutral
  2901. 2p loss,3q gain,167,151.7,0.0994779671656205,0.138627008401458,neutral
  2902. EGFR 19del,19q gain,93,84.5,0.211951187669991,0.138279359221207,neutral
  2903. 14q loss,3p gain,30,33,1,-0.137503480031917,neutral
  2904. KRAS,19p gain,22,24.2,1,-0.137503464134463,neutral
  2905. MET,4p loss,22,20,0.473101661101836,0.137503458172919,neutral
  2906. 22q gain,5p loss,11,10,0.558624279334145,0.137503392595965,neutral
  2907. RET,2q loss,6,6.6,1,-0.137503305160125,neutral
  2908. 19p gain,7p loss,4,4.4,1,-0.137503195865481,neutral
  2909. 21q loss,8p gain,4,4.4,1,-0.137503195865481,neutral
  2910. 4p gain,7p loss,4,4.4,1,-0.137503195865481,neutral
  2911. RET,5p loss,1,1.1,1,-0.137502212221508,neutral
  2912. EGFR L858R,1q gain,434,394.7,0.00206218181818182,0.136938520128874,neutral
  2913. EGFR L858R,3q gain,225,247.4,0.318950986394558,-0.136920493066461,neutral
  2914. ERBB2,19q loss,74,67.3,0.250379522960321,0.136918746497025,neutral
  2915. 5q loss,6q gain,126,114.8,0.167871440443213,0.134301080540899,neutral
  2916. 18q loss,8p gain,39,42.8,1,-0.134136639808019,neutral
  2917. mut_Negative,9q gain,70,63.8,0.286413573321555,0.133798478039005,neutral
  2918. KRAS,17p gain,26,23.7,0.466072488498536,0.13362451028084,neutral
  2919. EGFR 19del,5p gain,578,527.1,0.00017153199741435,0.132992798248207,neutral
  2920. 16p gain,18q gain,58,52.9,0.325649304461942,0.132785153920257,neutral
  2921. EGFR L858R,2q loss,183,167,0.100821446480231,0.131995538256861,neutral
  2922. EGFR L858R,6p gain,186,169.8,0.0998461824324324,0.131466155042233,neutral
  2923. 4q loss,5q gain,130,142.4,0.824954604316547,-0.131437513386894,neutral
  2924. 17q gain,19q loss,347,316.8,0.0152518006430868,0.131363323422623,neutral
  2925. 3p loss,8p gain,46,42,0.357942816291161,0.131244503408797,neutral
  2926. MET,1p gain,15,13.7,0.537098846153846,0.130786516270038,neutral
  2927. TP53,18q gain,133,121.5,0.106612169947192,0.130469921628388,neutral
  2928. KRAS,20q loss,34,37.2,1,-0.129767838469517,neutral
  2929. 16q gain,21q loss,15,16.4,1,-0.128733232017659,neutral
  2930. 2p gain,3p loss,142,129.9,0.145700578088578,0.128489489480432,neutral
  2931. EGFR L858R,16q loss,215,196.9,0.0828107332677165,0.12687354240692,neutral
  2932. PIK3CA,4q loss,66,60.5,0.322681361646235,0.125530862212029,neutral
  2933. KRAS,1q loss,11,12,1,-0.125530772788875,neutral
  2934. MET,5q gain,11,12,1,-0.125530772788875,neutral
  2935. ROS1,3q loss,11,12,1,-0.125530772788875,neutral
  2936. 21q gain,7p loss,6,5.5,0.622517279264882,0.125530663494082,neutral
  2937. mut_Negative,5p gain,425,463.6,0.0286209714285714,-0.125417722267672,neutral
  2938. 15q loss,18q gain,101,92.6,0.204118435652569,0.125271181421415,neutral
  2939. 12q gain,20q loss,42,45.8,1,-0.124958241930926,neutral
  2940. 14q loss,4p gain,21,22.9,1,-0.124958213431043,neutral
  2941. 19q gain,21q gain,23,21.1,0.49634082021541,0.124390805754204,neutral
  2942. 14q loss,20q gain,137,125.7,0.166539445727483,0.124191233960714,neutral
  2943. 15q loss,2p gain,175,160.6,0.105630749639596,0.123883021810522,neutral
  2944. EGFR 19del,9q gain,79,72.5,0.28517108311229,0.123871641789377,neutral
  2945. 11q gain,3q loss,118,108.3,0.212756918894427,0.123753605690331,neutral
  2946. 3p loss,6q gain,173,158.8,0.123218599905078,0.123561117924093,neutral
  2947. 3q gain,6q loss,281,258,0.0466899240506329,0.12319906022072,neutral
  2948. KRAS,PIK3CA,27,29.4,1,-0.122856704166651,neutral
  2949. 18q loss,9q gain,92,84.5,0.247923157659669,0.122682505856368,neutral
  2950. MET,19q loss,27,24.8,0.463379061190277,0.122619239263599,neutral
  2951. 11p loss,1p gain,182,167.3,0.125247783041213,0.121500998082651,neutral
  2952. 10q loss,13q gain,181,166.4,0.106488126801153,0.121334256835961,neutral
  2953. 17p loss,4p gain,81,74.5,0.271714518847007,0.120681466882623,neutral
  2954. BRAF,KRAS,15,16.3,1,-0.119909387027534,neutral
  2955. KRAS,4q loss,95,103.2,1,-0.11944354013834,neutral
  2956. 3q gain,7q loss,109,100.4,0.230729029213483,0.118568854376136,neutral
  2957. 12q loss,16q gain,104,112.9,1,-0.118461946809082,neutral
  2958. 11q gain,3p loss,271,249.7,0.0585626653306613,0.118097025771867,neutral
  2959. 19p gain,3q gain,65,59.9,0.337228333333333,0.117883696229526,neutral
  2960. 17q loss,6p gain,88,81.1,0.287897464726631,0.117801595359126,neutral
  2961. 6p loss,9q gain,37,34.1,0.447948694187026,0.117753498332003,neutral
  2962. 10q gain,4p loss,55,50.7,0.371947219827586,0.11744584916164,neutral
  2963. ERBB2,19q gain,18,16.6,0.539878274877651,0.116813597386636,neutral
  2964. MET,17q loss,9,8.3,0.595580148713826,0.1168135297906,neutral
  2965. 4q loss,9p gain,89,82.1,0.287302555163283,0.116423100452401,neutral
  2966. 21q gain,6p loss,31,33.6,1,-0.116192981492561,neutral
  2967. 12q loss,16p gain,207,191,0.11480461575179,0.116058123625218,neutral
  2968. EGFR 19del,10q gain,57,52.6,0.366931493310315,0.115899098587575,neutral
  2969. EGFR L858R,4p loss,249,229.8,0.081198589047854,0.115766939468427,neutral
  2970. 14q loss,18q gain,24,26,1,-0.115477171179729,neutral
  2971. 19q gain,7p loss,6,6.5,1,-0.11547703245933,neutral
  2972. 11q gain,17q loss,94,86.8,0.285484794520548,0.114965701389611,neutral
  2973. 15q loss,2q gain,221,204.1,0.0881606568627451,0.114770181840698,neutral
  2974. 11p gain,14q loss,51,47.1,0.401851503630927,0.11477016382278,neutral
  2975. RET,17q loss,4,3.7,0.681117570643642,0.112474436820989,neutral
  2976. 10q gain,16q loss,47,43.5,0.410272407486176,0.111645331131274,neutral
  2977. 20q loss,2p gain,38,35.2,0.459711113445378,0.110423959493703,neutral
  2978. 16p gain,22q loss,329,304.8,0.0425628266395526,0.110224677647681,neutral
  2979. 11p gain,2q loss,77,83.1,1,-0.109990017434602,neutral
  2980. EGFR L858R,5p gain,474,439.5,0.00653011185682327,0.109023891365634,neutral
  2981. 14q gain,1p loss,194,179.9,0.141155222691045,0.108861459994455,neutral
  2982. EGFR 19del,6p loss,145,134.5,0.208008874262369,0.108446719690949,neutral
  2983. ERBB2,12q gain,27,29.1,1,-0.108059707297462,neutral
  2984. 19p gain,2q gain,27,29.1,1,-0.108059707297462,neutral
  2985. 16p gain,1q loss,25,23.2,0.508378788128607,0.107803244761239,neutral
  2986. 4q loss,6q gain,111,119.6,1,-0.107657703614787,neutral
  2987. 17q gain,2p loss,146,135.6,0.213044798551381,0.106611183052325,neutral
  2988. EGFR 19del,17p loss,397,368.9,0.0288532378969287,0.105909215567402,neutral
  2989. 10q gain,2p loss,25,26.9,1,-0.105678037134396,neutral
  2990. MET,11q gain,17,15.8,0.559866539553753,0.105610123506653,neutral
  2991. 16q gain,18q gain,29,31.2,1,-0.105493093768534,neutral
  2992. EGFR L858R,11p loss,227,211.1,0.126798794326241,0.104765714044186,neutral
  2993. KRAS,11q gain,85,91.4,1,-0.104731312148275,neutral
  2994. 10q gain,17p loss,73,67.9,0.340328535947712,0.104484874678611,neutral
  2995. TP53,KRAS,207,222.5,0.554877422969188,-0.104174563499249,neutral
  2996. 10q loss,3p gain,124,115.4,0.231057511230907,0.103696887958229,neutral
  2997. EGFR 19del,4p gain,62,57.7,0.386817174753113,0.103696879287704,neutral
  2998. 21q gain,7q loss,26,24.2,0.510637668863262,0.103504534481609,neutral
  2999. RET,17p loss,13,12.1,0.585834053182917,0.103504493209391,neutral
  3000. PIK3CA,3p gain,19,20.4,1,-0.102569681530846,neutral
  3001. 19q gain,6q gain,44,41,0.455358986969315,0.101879590027617,neutral
  3002. 16q gain,6p loss,69,64.3,0.382139505588994,0.101777609054456,neutral
  3003. 13q loss,4q gain,212,227.4,0.719527353689567,-0.101167984833087,neutral
  3004. mut_Negative,6p loss,127,118.4,0.25952208,0.10115940777937,neutral
  3005. 18q loss,4q gain,191,204.8,0.826011976190476,-0.100643071987211,neutral
  3006. RET,19q gain,3,2.8,0.692144737871674,0.0995353300532813,neutral
  3007. 11p loss,16p gain,219,204.6,0.153991455137146,0.0981247201067393,neutral
  3008. ALK,2q gain,29,27.1,0.51326282251438,0.0977600137823301,neutral
  3009. 11p loss,9q gain,60,64.2,1,-0.0976107808961051,neutral
  3010. mut_Negative,20q loss,73,78.1,1,-0.0974260714692207,neutral
  3011. 16q loss,5q gain,146,136.5,0.247923157659669,0.0970674110829498,neutral
  3012. 16p gain,9p gain,72,77,1,-0.0968615262412719,neutral
  3013. 1q loss,20q gain,34,31.8,0.487763262588431,0.0965079514977404,neutral
  3014. mut_Negative,17q loss,107,100.1,0.312562902235861,0.0961688131584504,neutral
  3015. 15q loss,9q gain,96,102.6,1,-0.0959244103313547,neutral
  3016. EGFR L858R,6q loss,194,207.3,0.908009817351598,-0.0956634592637522,neutral
  3017. 3q gain,4p gain,64,59.9,0.401851503630927,0.0955158866690883,neutral
  3018. KRAS,17q gain,104,111.1,1,-0.0952752794955005,neutral
  3019. 6q gain,7q loss,44,47,1,-0.0951572121114998,neutral
  3020. 2p gain,7q loss,41,38.4,0.479077669862443,0.0945175749593016,neutral
  3021. mut_Negative,17p loss,304,324.5,0.517647117647059,-0.0941471515574946,neutral
  3022. 1p gain,22q loss,266,249.2,0.117059428026692,0.0941221737081464,neutral
  3023. 20q loss,6q gain,46,43.1,0.464574382586856,0.0939459707526103,neutral
  3024. 14q loss,17p gain,24,22.5,0.538039901920719,0.0931093643166364,neutral
  3025. ROS1,17q gain,21,22.4,1,-0.0931093614541487,neutral
  3026. ROS1,20q loss,8,7.5,0.633195137067938,0.09310928416705,neutral
  3027. KRAS,19p loss,182,194,0.886222546296296,-0.0921181970851972,neutral
  3028. 13q gain,7q loss,38,40.5,1,-0.0919224660054532,neutral
  3029. MET,8q gain,35,37.3,1,-0.0918206830058451,neutral
  3030. 21q loss,6p gain,23,24.5,1,-0.0911478496546169,neutral
  3031. 15q gain,1p loss,36,33.8,0.502061339396445,0.0909736339632682,neutral
  3032. 3p loss,4q gain,189,201.2,0.994658713968958,-0.0902440660685462,neutral
  3033. 16p loss,17p gain,48,45.1,0.460776380033557,0.0899069530265729,neutral
  3034. 13q gain,6p loss,53,56.4,1,-0.0897027865386165,neutral
  3035. EGFR L858R,13q loss,328,308.3,0.0942369859017987,0.0893609225877073,neutral
  3036. PIK3CA,6q loss,65,61.1,0.420218923728814,0.0892673239298716,neutral
  3037. 21q gain,8q loss,15,14.1,0.593564207562349,0.0892672767058512,neutral
  3038. RET,3q loss,5,4.7,0.664446372239748,0.0892671539236323,neutral
  3039. 15q gain,18q loss,74,69.6,0.392753264781491,0.0884379523426046,neutral
  3040. 18q loss,9p gain,118,111,0.312103513157895,0.0882271753015014,neutral
  3041. 13q gain,20q loss,35,37.2,1,-0.0879476748983738,neutral
  3042. 13q loss,9p gain,131,123.3,0.284930446704998,0.0873940051444696,neutral
  3043. mut_Negative,12q gain,138,129.9,0.292588014964789,0.0872668296987956,neutral
  3044. ERBB2,6q gain,29,27.3,0.537076904176904,0.0871519181164196,neutral
  3045. TP53,MET,41,38.6,0.45343027333894,0.0870230403590183,neutral
  3046. 19q gain,9q loss,108,101.7,0.332120056768559,0.0867116249182862,neutral
  3047. EGFR L858R,18q loss,295,277.8,0.125631571225745,0.0866683521272233,neutral
  3048. ROS1,5p gain,42,44.6,1,-0.0866543622295919,neutral
  3049. 12q gain,8q loss,31,29.2,0.529482414924149,0.0862998177060827,neutral
  3050. 11p loss,13q gain,100,106.1,1,-0.0854246479582018,neutral
  3051. 18q gain,1q loss,7,6.6,0.643292987321712,0.0848887726780353,neutral
  3052. 10q gain,15q loss,79,74.5,0.379785081755594,0.0846122166842272,neutral
  3053. mut_Negative,22q loss,313,331.8,0.631208203753351,-0.0841512265242525,neutral
  3054. 21q loss,4q gain,20,21.2,1,-0.0840642239575025,neutral
  3055. 12q gain,6q gain,76,71.7,0.417373933870284,0.0840262882446419,neutral
  3056. 11p gain,20q loss,39,36.8,0.509180683971982,0.0837683355777132,neutral
  3057. 2q gain,8q loss,27,28.6,1,-0.0830557098348982,neutral
  3058. 4p loss,9q gain,74,69.9,0.42086983905125,0.082232803705526,neutral
  3059. 19q loss,4p gain,73,69,0.415518633856597,0.0813000906450695,neutral
  3060. EGFR L858R,11q gain,172,181.9,1,-0.0807369734969442,neutral
  3061. 10q gain,12q loss,46,43.5,0.491700518672199,0.080618442183613,neutral
  3062. MET,6p gain,14,14.8,1,-0.0801702929815109,neutral
  3063. 12q gain,21q gain,39,36.9,0.512196670781893,0.0798532866367597,neutral
  3064. 2p loss,6q gain,75,71,0.435624258555133,0.0790715601540546,neutral
  3065. ROS1,2q loss,16,16.9,1,-0.0789512933761552,neutral
  3066. KRAS,13q gain,53,50.2,0.482401169858451,0.0783049803169534,neutral
  3067. 11p loss,11q gain,183,193.2,1,-0.0782514415022303,neutral
  3068. PIK3CA,6q gain,36,34.1,0.528815242001641,0.0782251449764064,neutral
  3069. 13q gain,8q loss,25,23.7,0.564790847182813,0.0770410041097726,neutral
  3070. EGFR L858R,17q loss,90,94.9,1,-0.0764830775272841,neutral
  3071. PIK3CA,13q gain,31,29.4,0.547379190727938,0.0764520351107798,neutral
  3072. 13q gain,9q loss,152,144.2,0.307688880597015,0.0760001539560733,neutral
  3073. 11q loss,12q gain,76,72.1,0.445179995784148,0.0760001488220222,neutral
  3074. EGFR 19del,11q gain,230,218.2,0.228295546558704,0.0759827561159891,neutral
  3075. 14q gain,8p gain,43,40.8,0.502703685950413,0.0757674895267179,neutral
  3076. MET,22q loss,26,27.4,1,-0.0756642415804115,neutral
  3077. TP53,4q gain,310,326.6,0.674427493403694,-0.0752565730346943,neutral
  3078. KRAS,3q gain,118,124.3,1,-0.0750394306065608,neutral
  3079. 18q gain,9q loss,83,78.8,0.414582763157895,0.0749156975134646,neutral
  3080. EGFR L858R,20q gain,278,264,0.190343834173156,0.0745469506130198,neutral
  3081. ALK,3q gain,53,55.8,1,-0.0742727487195153,neutral
  3082. 15q loss,19p gain,86,81.7,0.405802289002558,0.0740005726145549,neutral
  3083. 12q loss,9q gain,57,60,1,-0.0740005687885593,neutral
  3084. 5q loss,9q gain,57,60,1,-0.0740005687885593,neutral
  3085. RET,7p gain,19,20,1,-0.0740005434781374,neutral
  3086. 1q loss,2p gain,12,11.4,0.624926503189793,0.0740005181677326,neutral
  3087. 13q gain,4p gain,23,24.2,1,-0.0733731552264946,neutral
  3088. 19q gain,22q loss,106,111.5,1,-0.0729794386434901,neutral
  3089. EGFR L858R,22q loss,299,314.5,0.855567981220657,-0.0729145303031703,neutral
  3090. 3q loss,4q gain,83,87.3,1,-0.0728703088336382,neutral
  3091. mut_Negative,6q loss,230,218.7,0.244977361359571,0.0726806375426645,neutral
  3092. 22q gain,2p loss,45,42.8,0.513338102669404,0.0723141883365113,neutral
  3093. EGFR 19del,2p gain,108,113.5,1,-0.0716609786542682,neutral
  3094. 21q gain,5q loss,62,59,0.481110058309038,0.0715532491932013,neutral
  3095. 12q gain,17q loss,56,58.8,1,-0.070389315623585,neutral
  3096. 16q gain,17q loss,57,54.3,0.500254673013245,0.0700097086624435,neutral
  3097. 16q loss,3p gain,72,68.6,0.464615937238494,0.0697883202257756,neutral
  3098. TP53,13q gain,212,222.5,1,-0.0697410680791348,neutral
  3099. 11p loss,2q gain,134,127.7,0.371947219827586,0.0694744703308844,neutral
  3100. KRAS,5p loss,15,14.3,0.615284253701481,0.0689473066365664,neutral
  3101. 7q loss,8p gain,13,12.4,0.626636913580247,0.0681714489432951,neutral
  3102. 16q loss,4p gain,50,47.7,0.511110234664471,0.0679388147437959,neutral
  3103. 11p gain,7q loss,42,40.1,0.538697594936709,0.0667870749357011,neutral
  3104. PIK3CA,1p loss,38,39.8,1,-0.0667689950423068,neutral
  3105. PIK3CA,8q gain,132,126.1,0.34114824912892,0.0659696488038696,neutral
  3106. MET,11p gain,9,8.6,0.65375435796128,0.0655882670697783,neutral
  3107. 12q gain,2p loss,79,75.5,0.470737006263048,0.0653760003862145,neutral
  3108. KRAS,11p loss,111,106.1,0.415806628498728,0.065135014320203,neutral
  3109. 16q gain,19q loss,156,163.2,1,-0.0650950241418652,neutral
  3110. 2p gain,5p loss,13,13.6,1,-0.0650949792616828,neutral
  3111. TP53,ERBB2,100,104.6,1,-0.0648828452403069,neutral
  3112. 16q loss,19q gain,73,69.8,0.477484710054234,0.0646694184973525,neutral
  3113. 8p gain,9p loss,46,44,0.52052117816092,0.0641303231638389,neutral
  3114. BRAF,19q gain,11,11.5,1,-0.064130280396247,neutral
  3115. PIK3CA,11p loss,65,62.2,0.49632657273104,0.0635251277937587,neutral
  3116. 17q gain,20q loss,86,82.3,0.460776380033557,0.0634442216259841,neutral
  3117. 16q loss,1p gain,163,156,0.363235162127108,0.0633259313972764,neutral
  3118. 12q loss,8p gain,29,30.3,1,-0.0632648721139523,neutral
  3119. 21q gain,3q loss,34,35.5,1,-0.0622842603252462,neutral
  3120. 19p loss,8p gain,62,59.4,0.489212712920648,0.0618052742882689,neutral
  3121. mut_Negative,18q gain,60,57.5,0.512299802550391,0.0614005342098333,neutral
  3122. TP53,10q gain,102,97.8,0.405186267064846,0.0606627758324846,neutral
  3123. MET,1q gain,33,34.4,1,-0.0599425226640653,neutral
  3124. 22q gain,4p loss,84,80.6,0.477548407005838,0.0596094818931439,neutral
  3125. ERBB2,19p loss,95,91.2,0.441800337410375,0.0588936827259594,neutral
  3126. ERBB2,2p loss,30,28.8,0.581452163034705,0.0588936690161443,neutral
  3127. 19p gain,21q gain,15,14.4,0.629043001988072,0.0588936489787336,neutral
  3128. RET,2p loss,5,4.8,0.694303404919953,0.0588935688292274,neutral
  3129. ROS1,17p gain,5,4.8,0.685968607843137,0.0588935688292274,neutral
  3130. TP53,8p gain,71,68.2,0.46866134085213,0.0580472770254953,neutral
  3131. 1p gain,6q loss,171,164.3,0.379505923374946,0.0576638413827327,neutral
  3132. EGFR 19del,5q gain,172,165.3,0.378032244722103,0.0573218368973885,neutral
  3133. ALK,9p loss,67,64.4,0.504148406933553,0.0571003985371678,neutral
  3134. MET,9q loss,26,25,0.594445878568556,0.056583506171068,neutral
  3135. EGFR 19del,MET,20,20.8,1,-0.0565835006222457,neutral
  3136. ERBB2,11p loss,48,49.9,1,-0.0560053982845201,neutral
  3137. 11q gain,2p loss,116,111.6,0.451117584175084,0.0557877732822604,neutral
  3138. PIK3CA,14q loss,29,27.9,0.588660672302737,0.0557877585718058,neutral
  3139. BRAF,17p gain,8,7.7,0.66779743902439,0.0551414839314283,neutral
  3140. BRAF,8q loss,8,7.7,0.66779743902439,0.0551414839314283,neutral
  3141. KRAS,8q gain,223,214.8,0.310624896884598,0.0540497143525258,neutral
  3142. PIK3CA,20q loss,21,21.8,1,-0.0539387818998931,neutral
  3143. ERBB2,5p gain,100,103.8,1,-0.0538064384142517,neutral
  3144. 19p loss,4p gain,97,93.5,0.463448961038961,0.0530183767320043,neutral
  3145. BRAF,2q gain,19,19.7,1,-0.0521961841447711,neutral
  3146. ERBB2,3p gain,17,16.4,0.624926503189793,0.0518389004716804,neutral
  3147. 2q gain,3p loss,171,165,0.405508554371002,0.0515302975721502,neutral
  3148. 11p loss,18q gain,60,57.9,0.539878274877651,0.0513991437856914,neutral
  3149. 20q loss,6p gain,61,63.2,1,-0.0511153074940038,neutral
  3150. 20q loss,21q gain,23,22.2,0.608838138510809,0.0510741619903617,neutral
  3151. PIK3CA,5p gain,125,129.5,1,-0.0510239990138863,neutral
  3152. ERBB2,10q loss,81,78.2,0.501939743589744,0.0507532940872775,neutral
  3153. 10q gain,11p loss,45,46.6,1,-0.0504049424295581,neutral
  3154. ERBB2,15q loss,77,79.7,1,-0.0497212720609056,neutral
  3155. EGFR 19del,16p loss,220,227.6,1,-0.0489970317048168,neutral
  3156. TP53,4p gain,111,107.3,0.447948694187026,0.0489095959991357,neutral
  3157. 14q gain,20q loss,102,98.6,0.489811710253217,0.0489095956036816,neutral
  3158. PIK3CA,16q loss,60,58,0.546576285598047,0.048909592189597,neutral
  3159. RET,4q gain,6,5.8,0.688439843382929,0.0489095175675789,neutral
  3160. ROS1,5p loss,3,2.9,0.716744771140419,0.0489094346544926,neutral
  3161. 12q loss,2p gain,97,93.8,0.502838566707972,0.04839681948512,neutral
  3162. 11q gain,2q loss,158,152.8,0.44143123258759,0.0482800119213147,neutral
  3163. 11q gain,20q loss,70,67.7,0.537098846153846,0.0481990812554368,neutral
  3164. 17p gain,3p loss,67,64.8,0.531902700819672,0.0481672751500056,neutral
  3165. EGFR 19del,6q loss,257,248.6,0.355976698481562,0.047942061131964,neutral
  3166. 16q gain,19p loss,214,221.2,1,-0.0477405867518364,neutral
  3167. 2p loss,4q gain,87,89.9,1,-0.0473057094290988,neutral
  3168. RET,9p gain,3,3.1,1,-0.0473055596503664,neutral
  3169. 11p gain,5q loss,95,98.1,1,-0.0463256182020077,neutral
  3170. 13q gain,14q loss,46,47.5,1,-0.0462936423698522,neutral
  3171. ERBB2,9q loss,70,67.8,0.53649519459238,0.0460696420083984,neutral
  3172. 4q gain,9p loss,204,210.6,1,-0.045936281950552,neutral
  3173. BRAF,2p gain,16,15.5,0.636253735130849,0.0458036605265497,neutral
  3174. 16p gain,20q loss,74,71.7,0.53775811529027,0.0455521455604999,neutral
  3175. 1p gain,21q loss,22,22.7,1,-0.0451887535442675,neutral
  3176. 14q loss,9p gain,39,37.8,0.593282490945674,0.0450878777849919,neutral
  3177. 13q loss,8p gain,49,47.5,0.565569323612799,0.0448542264865498,neutral
  3178. 2q gain,5q loss,123,119.3,0.488926351913478,0.0440642688936425,neutral
  3179. ERBB2,4q loss,50,48.5,0.575812980613893,0.0439433386637121,neutral
  3180. EGFR L858R,2q gain,124,120.3,0.489212712920648,0.0437034745197608,neutral
  3181. 1p loss,6q gain,81,78.6,0.537625329243354,0.0433925900748929,neutral
  3182. 19p gain,8p loss,76,73.8,0.539878274877651,0.0423785966117145,neutral
  3183. BRAF,6p gain,27,27.8,1,-0.0421254602962362,neutral
  3184. ROS1,22q loss,31,31.9,1,-0.0412881953606376,neutral
  3185. 6q loss,8p gain,31,31.9,1,-0.0412881953606376,neutral
  3186. mut_Negative,10q gain,45,46.3,1,-0.0410871830415043,neutral
  3187. 11p gain,2p loss,59,60.7,1,-0.04098155515818,neutral
  3188. 2q loss,6q gain,100,97.2,0.52843335248256,0.040971776900395,neutral
  3189. 14q gain,7p loss,25,24.3,0.631271506359301,0.0409717644326662,neutral
  3190. 10q loss,9q gain,98,100.8,1,-0.0406419804080747,neutral
  3191. PIK3CA,21q gain,18,17.5,0.646086493866245,0.0406419615974374,neutral
  3192. 1p gain,20q loss,57,58.6,1,-0.0399387384594449,neutral
  3193. 8p gain,9q loss,43,44.2,1,-0.0397097006930918,neutral
  3194. 1p loss,9q gain,40,41.1,1,-0.0391383842538916,neutral
  3195. KRAS,1q gain,193,198.3,1,-0.0390838280755207,neutral
  3196. 17q loss,2p gain,44,45.2,1,-0.0388192401856123,neutral
  3197. ALK,3q loss,26,26.7,1,-0.0383281041116181,neutral
  3198. EGFR L858R,5q loss,192,197.1,1,-0.037821463490696,neutral
  3199. 16p gain,5q loss,196,191,0.464004962311558,0.0372810141525778,neutral
  3200. mut_Negative,3p gain,75,73.1,0.559866539553753,0.0370191844310428,neutral
  3201. ALK,3p gain,16,15.6,0.654102447690486,0.0365258529050157,neutral
  3202. ALK,MET,4,3.9,0.714133618012422,0.0365257835448967,neutral
  3203. TP53,5p loss,65,63.4,0.565247443273906,0.0359568721750709,neutral
  3204. 8p loss,9q gain,95,92.7,0.546251555374593,0.0353581708248826,neutral
  3205. 11p loss,5q gain,150,146.4,0.505500400165017,0.0350469447341272,neutral
  3206. 3q gain,6p loss,143,139.6,0.513187480476778,0.034716202998948,neutral
  3207. 22q loss,9q gain,98,95.7,0.544663560081466,0.0342628209784921,neutral
  3208. mut_Negative,4q gain,151,154.6,1,-0.0339917674876082,neutral
  3209. 18q loss,2q gain,172,168,0.49632657273104,0.0339473299262515,neutral
  3210. BRAF,1q gain,63,64.5,1,-0.0339473265977753,neutral
  3211. 15q gain,3p loss,70,68.4,0.573932170573969,0.0333585921253954,neutral
  3212. 16p loss,1p gain,147,150.4,1,-0.0329884097352634,neutral
  3213. 13q loss,3p gain,105,107.4,1,-0.0326046623615475,neutral
  3214. 10q loss,19p gain,82,80.2,0.567717307692308,0.0320216691017835,neutral
  3215. 11p gain,21q loss,14,14.3,1,-0.0305882982146315,neutral
  3216. TP53,16p gain,438,429.1,0.359758086580087,0.0296169680569752,neutral
  3217. ERBB2,7q gain,68,69.4,1,-0.0294009121606543,neutral
  3218. 7q loss,9q gain,25,24.5,0.646828110671937,0.0291463338824188,neutral
  3219. KRAS,5q loss,101,99,0.570475713708047,0.0288548597865066,neutral
  3220. 13q gain,5q loss,101,99,0.570475713708047,0.0288548597865066,neutral
  3221. 19q gain,21q loss,10,10.2,1,-0.0285691239086607,neutral
  3222. ROS1,15q gain,5,5.1,1,-0.0285690956206068,neutral
  3223. TP53,12q gain,269,274.3,1,-0.0281484483680224,neutral
  3224. 10q gain,8p loss,66,67.3,1,-0.0281404761421065,neutral
  3225. KRAS,12q gain,63,61.8,0.60650488185823,0.0277449860363184,neutral
  3226. 12q gain,13q gain,63,61.8,0.60650488185823,0.0277449860363184,neutral
  3227. KRAS,22q loss,155,158,1,-0.0276563411355788,neutral
  3228. TP53,PIK3CA,133,130.5,0.538619554738562,0.0273764368532724,neutral
  3229. 19q gain,2p loss,44,43.2,0.625761502590674,0.0264722052892436,neutral
  3230. 13q gain,18q loss,137,139.5,1,-0.0260892269814529,neutral
  3231. ERBB2,8q loss,11,11.2,1,-0.0259951851125914,neutral
  3232. 21q loss,6q gain,17,16.7,0.666912885826772,0.0256866284185541,neutral
  3233. ERBB2,17p loss,74,72.7,0.597406214371738,0.0255699031105226,neutral
  3234. mut_Negative,19q gain,73,74.3,1,-0.0254657433133666,neutral
  3235. 11p gain,4q loss,104,102.2,0.581879375,0.025188329647612,neutral
  3236. EGFR L858R,7q loss,82,80.6,0.599627914159647,0.0248440679214767,neutral
  3237. 13q loss,15q gain,76,77.3,1,-0.0244689924014448,neutral
  3238. 18q loss,6q gain,159,161.7,1,-0.0242929117868793,neutral
  3239. EGFR L858R,17p gain,48,47.2,0.626636913580247,0.0242475411524162,neutral
  3240. 3q gain,5p loss,36,35.4,0.642627665477606,0.0242475394543297,neutral
  3241. 3p gain,6q loss,71,72.2,1,-0.0241798091179002,neutral
  3242. EGFR L858R,4q loss,202,205.4,1,-0.0240808874968091,neutral
  3243. mut_Negative,5q gain,143,145.4,1,-0.0240121205885701,neutral
  3244. mut_Negative,2q gain,129,126.9,0.570475713708047,0.023678994618783,neutral
  3245. PIK3CA,16p loss,55,55.9,1,-0.02341666020796,neutral
  3246. mut_Negative,16p loss,197,200.2,1,-0.0232463433216934,neutral
  3247. EGFR L858R,8q gain,421,427.7,1,-0.022778973385756,neutral
  3248. 11p loss,8p gain,33,32.5,0.646828110671937,0.02202629960415,neutral
  3249. 3p loss,5q gain,192,189.1,0.549246658536585,0.0219569465064193,neutral
  3250. 22q gain,6p loss,40,39.4,0.635242998809996,0.021804364825856,neutral
  3251. 1p loss,4q gain,101,99.5,0.599069899678973,0.0215868600547627,neutral
  3252. 18q gain,20q loss,20,20.3,1,-0.0214797167501486,neutral
  3253. BRAF,3q gain,41,40.4,0.644713970704671,0.0212686115277591,neutral
  3254. MET,9p gain,7,6.9,0.706150435967302,0.0207585302973779,neutral
  3255. ERBB2,2q gain,28,28.4,1,-0.0204640953027008,neutral
  3256. PIK3CA,19p gain,14,14.2,1,-0.0204640880456912,neutral
  3257. ROS1,19q gain,7,7.1,1,-0.0204640735316875,neutral
  3258. 13q loss,2q gain,184,186.6,1,-0.0202432188148911,neutral
  3259. ERBB2,2q loss,39,39.5,1,-0.0183785246323013,neutral
  3260. BRAF,4p gain,8,7.9,0.69324004296875,0.0181473238828348,neutral
  3261. EGFR 19del,4q gain,178,175.8,0.578325712555511,0.017942169696075,neutral
  3262. PIK3CA,17q gain,66,65.2,0.627722120970951,0.0175940573326506,neutral
  3263. 2q loss,8p gain,26,25.7,0.66640476565577,0.016743257357349,neutral
  3264. 16p loss,19q gain,68,67.3,0.633984348689436,0.0149282393206582,neutral
  3265. 17p loss,22q gain,109,107.9,0.622394880095923,0.0146332688269384,neutral
  3266. BRAF,11q gain,30,29.7,0.669191380259536,0.0144995648375577,neutral
  3267. BRAF,9q gain,10,9.9,0.692642485345838,0.0144995551224526,neutral
  3268. 1p loss,21q gain,40,40.4,1,-0.0143552894060435,neutral
  3269. mut_Negative,21q loss,30,30.3,1,-0.0143552882157019,neutral
  3270. TP53,5q gain,310,307,0.554333913043478,0.014029559449284,neutral
  3271. mut_Negative,16q gain,119,120.1,1,-0.0132745763999339,neutral
  3272. 17p loss,19q gain,110,109,0.626796799363057,0.0131753875444848,neutral
  3273. RET,18q loss,11,10.9,0.716199123011253,0.0131753767152585,neutral
  3274. EGFR L858R,13q gain,99,99.9,1,-0.0130561515125929,neutral
  3275. 12q gain,16q loss,123,121.9,0.624642079840319,0.0129601885479692,neutral
  3276. 18q gain,8p loss,83,83.7,1,-0.0121162848623762,neutral
  3277. 11p gain,1q loss,12,11.9,0.695599360124854,0.0120728221976771,neutral
  3278. EGFR 19del,2q gain,143,144.2,1,-0.0120560167355053,neutral
  3279. 11p loss,4q gain,157,155.7,0.616338404,0.0119956139327153,neutral
  3280. EGFR L858R,16q gain,113,113.9,1,-0.0114449733967392,neutral
  3281. PIK3CA,11q gain,54,53.6,0.657954569850039,0.0107264045992847,neutral
  3282. 16p gain,21q loss,28,27.8,0.677170891594658,0.0103419405146385,neutral
  3283. 13q loss,18q gain,84,84.6,1,-0.0102683342357463,neutral
  3284. KRAS,6p loss,56,56.4,1,-0.0102683336267061,neutral
  3285. EGFR L858R,6p loss,113,112.2,0.635242998809996,0.010250095783439,neutral
  3286. 14q loss,9q gain,29,28.8,0.671702275049116,0.00998408511789387,neutral
  3287. EGFR 19del,1p loss,163,161.9,0.624869325618516,0.00976897821451635,neutral
  3288. 1p loss,5q gain,93,93.6,1,-0.00927781259359738,neutral
  3289. ROS1,17p loss,31,31.2,1,-0.0092778106047713,neutral
  3290. 11p gain,16p loss,95,94.4,0.646552579113924,0.00914065289124019,neutral
  3291. 19q gain,4p loss,81,81.5,1,-0.0088781502537505,neutral
  3292. 9p gain,9q loss,114,114.7,1,-0.00883156619138862,neutral
  3293. MET,16q loss,17,17.1,1,-0.00846157378536794,neutral
  3294. 13q gain,8p loss,154,153.1,0.635088963874553,0.0084560675317682,neutral
  3295. ALK,17p loss,69,69.4,1,-0.00833929970762187,neutral
  3296. MET,4q loss,18,17.9,0.692640949960907,0.00803731458778263,neutral
  3297. 21q gain,9q gain,18,18.1,1,-0.00799278632537163,neutral
  3298. 11p loss,3p gain,74,73.6,0.654102447690486,0.00781950339974082,neutral
  3299. 16p loss,9q gain,58,57.7,0.66640476565577,0.0074815800761737,neutral
  3300. 21q loss,5q gain,20,19.9,0.687887570532915,0.00723156560621577,neutral
  3301. TP53,EGFR L858R,445,442.8,0.596513827309237,0.00715011379849448,neutral
  3302. TP53,3q loss,265,263.7,0.622285645741703,0.00709478820497635,neutral
  3303. TP53,3p gain,155,154.3,0.644713970704671,0.00653015316860975,neutral
  3304. 11q gain,5p loss,26,26.1,1,-0.00553818141544348,neutral
  3305. EGFR 19del,11p gain,119,118.6,0.65816607495069,0.00485756324041578,neutral
  3306. PIK3CA,22q loss,93,92.7,0.665648813559322,0.00466137686782907,neutral
  3307. 2p loss,9q gain,37,37.1,1,-0.00389391505350074,neutral
  3308. 1p loss,6p gain,115,115.3,1,-0.0037586514936204,neutral
  3309. 13q gain,15q loss,169,169.4,1,-0.0034106279610781,neutral
  3310. 11p loss,15q gain,53,52.9,0.679092913231252,0.00272463682196765,neutral
  3311. mut_Negative,7q loss,85,85.1,1,-0.00169629046145215,neutral
  3312. ERBB2,3q loss,28,28,1,0,neutral
  3313. MET,20q gain,23,23,1,0,neutral
  3314. ROS1,12q loss,20,20,1,0,neutral
  3315. mut_Negative,3q gain,261,261,1,0,neutral
  3316. 18q gain,1p loss,37,37,1,0,neutral
  3317. 19p gain,21q loss,7,7,1,0,neutral
  3318. 21q loss,3p gain,10,10,1,0,neutral
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