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- allsnps: YES
- ## qpAdm version: 810
- seed: 1905193453
- left pops:
- SPGT
- InPe
- Armenia_MBA.SG
- Dali_MLBA
- right pops:
- Kazakhstan_Botai.SG
- Ganj_Dareh_N
- PPN
- Anatolia_N
- Iberia_MN
- Russia_MA1.SG
- Georgia_Satsurblia.SG
- Kostenki14.SG
- Russia_Karelia_HG
- Serbia_Iron_Gates_HG
- Tyumen_HG
- Onge.DG
- Russia_Shamanka_EN.SG
- 0 SPGT 85
- 1 InPe 10
- 2 Armenia_MBA.SG 4
- 3 Dali_MLBA 3
- 4 Kazakhstan_Botai.SG 3
- 5 Ganj_Dareh_N 7
- 6 PPN 8
- 7 Anatolia_N 22
- 8 Iberia_MN 4
- 9 Russia_MA1.SG 1
- 10 Georgia_Satsurblia.SG 1
- 11 Kostenki14.SG 1
- 12 Russia_Karelia_HG 2
- 13 Serbia_Iron_Gates_HG 32
- 14 Tyumen_HG 2
- 15 Onge.DG 2
- 16 Russia_Shamanka_EN.SG 10
- jackknife block size: 0.050
- snps: 1150476 indivs: 197
- number of blocks for block jackknife: 552
- ## ncols: 1150476
- coverage: SPGT 1134632
- coverage: InPe 878190
- coverage: Armenia_MBA.SG 919421
- coverage: Dali_MLBA 931588
- coverage: Kazakhstan_Botai.SG 1149870
- coverage: Ganj_Dareh_N 1029695
- coverage: PPN 835499
- coverage: Anatolia_N 1134099
- coverage: Iberia_MN 967760
- coverage: Russia_MA1.SG 805960
- coverage: Georgia_Satsurblia.SG 801311
- coverage: Kostenki14.SG 1048972
- coverage: Russia_Karelia_HG 1010733
- coverage: Serbia_Iron_Gates_HG 1139259
- coverage: Tyumen_HG 807474
- coverage: Onge.DG 1120748
- coverage: Russia_Shamanka_EN.SG 1149998
- dof (jackknife): 467.623
- numsnps used: 1150476
- codimension 1
- f4info:
- f4rank: 2 dof: 10 chisq: 19.199 tail: 0.0378121713 dofdiff: 12 chisqdiff: -19.199 taildiff: 1
- B:
- scale 1.000 1.000
- Ganj_Dareh_N 1.970 -0.354
- PPN 0.787 1.493
- Anatolia_N 0.504 1.629
- Iberia_MN 0.319 1.514
- Russia_MA1.SG 0.303 -0.126
- Georgia_Satsurblia.SG 1.068 0.660
- Kostenki14.SG 0.832 0.096
- Russia_Karelia_HG -0.485 0.734
- Serbia_Iron_Gates_HG -0.565 1.264
- Tyumen_HG 0.045 -0.164
- Onge.DG 1.736 -1.090
- Russia_Shamanka_EN.SG 1.284 -0.945
- A:
- scale 615.534 779.418
- InPe 0.365 -0.178
- Armenia_MBA.SG 0.253 1.723
- Dali_MLBA -1.674 -0.019
- full rank
- f4info:
- f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 10 chisqdiff: 19.199 taildiff: 0.0378121713
- B:
- scale 1.000 1.000 1.000
- Ganj_Dareh_N 1.989 -0.351 -0.125
- PPN 0.783 1.494 -0.628
- Anatolia_N 0.483 1.633 -0.972
- Iberia_MN 0.295 1.508 -0.334
- Russia_MA1.SG 0.313 -0.106 1.565
- Georgia_Satsurblia.SG 1.065 0.670 -0.757
- Kostenki14.SG 0.828 0.126 -0.158
- Russia_Karelia_HG -0.483 0.759 1.851
- Serbia_Iron_Gates_HG -0.582 1.266 1.319
- Tyumen_HG 0.045 -0.166 0.913
- Onge.DG 1.740 -1.073 0.604
- Russia_Shamanka_EN.SG 1.261 -0.933 -1.060
- A:
- scale 634.921 764.917 7555.811
- InPe 0.505 -0.087 1.429
- Armenia_MBA.SG 0.293 1.729 0.236
- Dali_MLBA -1.631 0.052 0.949
- best coefficients: 0.746 0.079 0.175
- Jackknife mean: 0.745884028 0.079268094 0.174847878
- std. errors: 0.015 0.022 0.018
- error covariance (* 1000000)
- 236 -193 -43
- -193 480 -286
- -43 -286 329
- summ: SPGT 3 0.037812 0.746 0.079 0.175 236 -193 -43 480 -286 329
- fixed pat wt dof chisq tail prob
- 000 0 10 19.199 0.0378122 0.746 0.079 0.175
- 001 1 11 104.466 2.32059e-17 0.772 0.228 -0.000
- 010 1 11 30.644 0.00125448 0.779 0.000 0.221
- 100 1 11 393.202 0 0.000 4.165 -3.165 infeasible
- 011 2 12 236.160 0 1.000 0.000 -0.000
- 101 2 12 686.384 0 0.000 1.000 -0.000
- 110 2 12 973.261 0 0.000 0.000 1.000
- best pat: 000 0.0378122 - -
- best pat: 010 0.00125448 chi(nested): 11.445 p-value for nested model: 0.000716793
- best pat: 011 1.04438e-43 chi(nested): 205.516 p-value for nested model: 1.30667e-46
- coeffs: 0.746 0.079 0.175
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: InPe Ganj_Dareh_N 0.001603 8.932695
- details: Armenia_MBA.SG Ganj_Dareh_N 0.000127 0.456541
- details: Dali_MLBA Ganj_Dareh_N -0.005175 -18.091549
- dscore: Ganj_Dareh_N f4: 0.000301 Z: 2.092993
- details: InPe PPN 0.000330 1.675359
- details: Armenia_MBA.SG PPN 0.003751 12.171380
- details: Dali_MLBA PPN -0.002009 -6.716419
- dscore: PPN f4: 0.000192 Z: 1.213004
- details: InPe Anatolia_N 0.000043 0.283825
- details: Armenia_MBA.SG Anatolia_N 0.003907 15.167133
- details: Dali_MLBA Anatolia_N -0.001264 -4.377604
- dscore: Anatolia_N f4: 0.000121 Z: 0.932847
- details: InPe Iberia_MN 0.000013 0.081173
- details: Armenia_MBA.SG Iberia_MN 0.003576 12.634152
- details: Dali_MLBA Iberia_MN -0.000713 -2.282114
- dscore: Iberia_MN f4: 0.000169 Z: 1.200255
- details: InPe Russia_MA1.SG 0.000629 3.193117
- details: Armenia_MBA.SG Russia_MA1.SG -0.000030 -0.105186
- details: Dali_MLBA Russia_MA1.SG -0.000580 -2.097257
- dscore: Russia_MA1.SG f4: 0.000366 Z: 2.287124
- details: InPe Georgia_Satsurblia.SG 0.000622 2.805892
- details: Armenia_MBA.SG Georgia_Satsurblia.SG 0.001997 6.134964
- details: Dali_MLBA Georgia_Satsurblia.SG -0.002835 -8.601214
- dscore: Georgia_Satsurblia.SG f4: 0.000127 Z: 0.720618
- details: InPe Kostenki14.SG 0.000649 3.104459
- details: Armenia_MBA.SG Kostenki14.SG 0.000702 2.290380
- details: Dali_MLBA Kostenki14.SG -0.002168 -6.661155
- dscore: Kostenki14.SG f4: 0.000161 Z: 0.966909
- details: InPe Russia_Karelia_HG -0.000076 -0.423736
- details: Armenia_MBA.SG Russia_Karelia_HG 0.001590 5.889733
- details: Dali_MLBA Russia_Karelia_HG 0.001542 5.375983
- dscore: Russia_Karelia_HG f4: 0.000339 Z: 2.283913
- details: InPe Serbia_Iron_Gates_HG -0.000351 -2.438710
- details: Armenia_MBA.SG Serbia_Iron_Gates_HG 0.002657 11.428860
- details: Dali_MLBA Serbia_Iron_Gates_HG 0.001720 6.297036
- dscore: Serbia_Iron_Gates_HG f4: 0.000249 Z: 2.051117
- details: InPe Tyumen_HG 0.000271 1.465651
- details: Armenia_MBA.SG Tyumen_HG -0.000309 -1.200318
- details: Dali_MLBA Tyumen_HG -0.000004 -0.015117
- dscore: Tyumen_HG f4: 0.000177 Z: 1.197952
- details: InPe Onge.DG 0.001632 9.078219
- details: Armenia_MBA.SG Onge.DG -0.001606 -5.688809
- details: Dali_MLBA Onge.DG -0.004504 -15.298406
- dscore: Onge.DG f4: 0.000303 Z: 2.019852
- details: InPe Russia_Shamanka_EN.SG 0.000932 6.154676
- details: Armenia_MBA.SG Russia_Shamanka_EN.SG -0.001541 -6.739214
- details: Dali_MLBA Russia_Shamanka_EN.SG -0.003444 -14.387458
- dscore: Russia_Shamanka_EN.SG f4: -0.000029 Z: -0.231023
- gendstat: Kazakhstan_Botai.SG Ganj_Dareh_N 2.093
- gendstat: Kazakhstan_Botai.SG PPN 1.213
- gendstat: Kazakhstan_Botai.SG Anatolia_N 0.933
- gendstat: Kazakhstan_Botai.SG Iberia_MN 1.200
- gendstat: Kazakhstan_Botai.SG Russia_MA1.SG 2.287
- gendstat: Kazakhstan_Botai.SG Georgia_Satsurblia.SG 0.721
- gendstat: Kazakhstan_Botai.SG Kostenki14.SG 0.967
- gendstat: Kazakhstan_Botai.SG Russia_Karelia_HG 2.284
- gendstat: Kazakhstan_Botai.SG Serbia_Iron_Gates_HG 2.051
- gendstat: Kazakhstan_Botai.SG Tyumen_HG 1.198
- gendstat: Kazakhstan_Botai.SG Onge.DG 2.020
- gendstat: Kazakhstan_Botai.SG Russia_Shamanka_EN.SG -0.231
- gendstat: Ganj_Dareh_N PPN -0.707
- gendstat: Ganj_Dareh_N Anatolia_N -1.458
- gendstat: Ganj_Dareh_N Iberia_MN -0.947
- gendstat: Ganj_Dareh_N Russia_MA1.SG 0.343
- gendstat: Ganj_Dareh_N Georgia_Satsurblia.SG -1.037
- gendstat: Ganj_Dareh_N Kostenki14.SG -0.791
- gendstat: Ganj_Dareh_N Russia_Karelia_HG 0.220
- gendstat: Ganj_Dareh_N Serbia_Iron_Gates_HG -0.369
- gendstat: Ganj_Dareh_N Tyumen_HG -0.665
- gendstat: Ganj_Dareh_N Onge.DG 0.011
- gendstat: Ganj_Dareh_N Russia_Shamanka_EN.SG -2.195
- gendstat: PPN Anatolia_N -0.599
- gendstat: PPN Iberia_MN -0.169
- gendstat: PPN Russia_MA1.SG 0.865
- gendstat: PPN Georgia_Satsurblia.SG -0.351
- gendstat: PPN Kostenki14.SG -0.171
- gendstat: PPN Russia_Karelia_HG 0.840
- gendstat: PPN Serbia_Iron_Gates_HG 0.411
- gendstat: PPN Tyumen_HG -0.072
- gendstat: PPN Onge.DG 0.642
- gendstat: PPN Russia_Shamanka_EN.SG -1.393
- gendstat: Anatolia_N Iberia_MN 0.492
- gendstat: Anatolia_N Russia_MA1.SG 1.414
- gendstat: Anatolia_N Georgia_Satsurblia.SG 0.038
- gendstat: Anatolia_N Kostenki14.SG 0.255
- gendstat: Anatolia_N Russia_Karelia_HG 1.459
- gendstat: Anatolia_N Serbia_Iron_Gates_HG 1.323
- gendstat: Anatolia_N Tyumen_HG 0.309
- gendstat: Anatolia_N Onge.DG 1.248
- gendstat: Anatolia_N Russia_Shamanka_EN.SG -1.208
- gendstat: Iberia_MN Russia_MA1.SG 1.095
- gendstat: Iberia_MN Georgia_Satsurblia.SG -0.228
- gendstat: Iberia_MN Kostenki14.SG -0.046
- gendstat: Iberia_MN Russia_Karelia_HG 1.047
- gendstat: Iberia_MN Serbia_Iron_Gates_HG 0.722
- gendstat: Iberia_MN Tyumen_HG 0.045
- gendstat: Iberia_MN Onge.DG 0.842
- gendstat: Iberia_MN Russia_Shamanka_EN.SG -1.400
- gendstat: Russia_MA1.SG Georgia_Satsurblia.SG -1.105
- gendstat: Russia_MA1.SG Kostenki14.SG -1.023
- gendstat: Russia_MA1.SG Russia_Karelia_HG -0.141
- gendstat: Russia_MA1.SG Serbia_Iron_Gates_HG -0.704
- gendstat: Russia_MA1.SG Tyumen_HG -0.938
- gendstat: Russia_MA1.SG Onge.DG -0.328
- gendstat: Russia_MA1.SG Russia_Shamanka_EN.SG -2.219
- gendstat: Georgia_Satsurblia.SG Kostenki14.SG 0.167
- gendstat: Georgia_Satsurblia.SG Russia_Karelia_HG 1.087
- gendstat: Georgia_Satsurblia.SG Serbia_Iron_Gates_HG 0.703
- gendstat: Georgia_Satsurblia.SG Tyumen_HG 0.243
- gendstat: Georgia_Satsurblia.SG Onge.DG 0.926
- gendstat: Georgia_Satsurblia.SG Russia_Shamanka_EN.SG -0.871
- gendstat: Kostenki14.SG Russia_Karelia_HG 0.988
- gendstat: Kostenki14.SG Serbia_Iron_Gates_HG 0.566
- gendstat: Kostenki14.SG Tyumen_HG 0.079
- gendstat: Kostenki14.SG Onge.DG 0.775
- gendstat: Kostenki14.SG Russia_Shamanka_EN.SG -1.100
- gendstat: Russia_Karelia_HG Serbia_Iron_Gates_HG -0.614
- gendstat: Russia_Karelia_HG Tyumen_HG -0.855
- gendstat: Russia_Karelia_HG Onge.DG -0.199
- gendstat: Russia_Karelia_HG Russia_Shamanka_EN.SG -2.242
- gendstat: Serbia_Iron_Gates_HG Tyumen_HG -0.414
- gendstat: Serbia_Iron_Gates_HG Onge.DG 0.357
- gendstat: Serbia_Iron_Gates_HG Russia_Shamanka_EN.SG -2.215
- gendstat: Tyumen_HG Onge.DG 0.647
- gendstat: Tyumen_HG Russia_Shamanka_EN.SG -1.178
- gendstat: Onge.DG Russia_Shamanka_EN.SG -2.579
- ## end of run
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