Driving Document

% Written with TexdStudio compiled using pdftex 3.14159265-2.6-1.40.17 TeXLive 2016
% or the other engine xetex 3.14159265-2.6-0.99996 TeXLive 2016
%txs:///pdflatex | txs:///biber | txs:///nomenclindex | txs:///pdflatex | txs:///pdflatex
%pdflatex.exe -synctex=1 -shell-escape -interaction=nonstopmode %.tex
% Shell escape is necessary for minted
% Note that the bib file is encoded in UTF-8
%biber --bblencoding=UTF-8 --bibencoding=UTF-8  "OngunArisevMSc" ;)
\documentclass[titlepage, footnotes, a4paper]{kuthesismod} % Kuthesis class with footnotes enabled
% The class(cls) file can be put into texmf tree and hashed with the command texhash(for TeXLive)
\input{macros} % the macros for kuthesis class
\usepackage{ifxetex}% load different packages with/without XeLaTex
\ifxetex
\usepackage{fontspec}% provides \setmainfont
\setmainfont[Numbers=OldStyle,Ligatures=Common,Mapping=tex-text]{Linux Libertine O}% public domain font % or use the libertine package instead
\else  % packages below are not needed with UTF8 based engines
\usepackage[utf8]{inputenc} % I write in UTF8
\usepackage[T1]{fontenc} % 256 glyphs are sufficient for our purposes
\usepackage{lmodern}
\fi
\usepackage[english]{babel}
\usepackage{csquotes}
\usepackage{graphicx} % Commented out \RequirePackage{graphicx} since it disables the passing of options in the \usepackage statement
\usepackage{caption}
\usepackage[list=true]{subcaption} % Provides subfigures with captions and lists them in ToC
\usepackage{amsfonts, amsmath, amssymb} %% AMS packages
\usepackage{esint} % extended set of integrals double closed etc.
\usepackage{textcomp} % We need the SI unit package to use fonts from here
\usepackage{siunitx} %% SI units
\usepackage{microtype} % textcomp is usually needed for this to work properly
\usepackage[usenames, dvipsnames]{xcolor}
\usepackage{hyperref} % Options configured later
\usepackage{hypcap} % For anchorage
\usepackage{float} % For additional position specifiers etc.
\usepackage[english, intoc]{nomencl} % nomenclature package use glossaries for having references to pages the symbols are used
\usepackage[backend=biber, backref=true, sorting=none, url=true, style = nature]{biblatex} % Need to implement change the style maybe
% Make the editor recognize the command DONE NOT COMPLETE-xpatch.cwl under /texstudio/completion/user
\usepackage{xpatch} % extending etoolbox commands for bibliography macros
\usepackage[page]{appendix} % for extended functionalities with appendices
\usepackage{minted} % for code highlightning READ THE MANUAL Python installion is required and pdflatex(or xetex etc.) should be run with -shell-escape option
\usepackage{tikz} % for some graphics
% Load the necessary libraries for Tikz
\usetikzlibrary{shapes.geometric, shapes.arrows, decorations.markings}
\usetikzlibrary{arrows.meta}
\usetikzlibrary{intersections}% for "name path".
\usetikzlibrary{fadings}%
\usetikzlibrary{calc,math}


%% The following packages are not necessary
% Geometry package distorts this class
%\usepackage{calc} % Calculation functionality without need for TeX primitives
\usepackage{wrapfig}
%\usepackage{braket} % Braket notation
%\usepackage{rotating} % For sideways environment

% Add the bibliography in BibLaTeX format UTF-8 encoding
\addbibresource{ThesisReferences.bib}
% Customize backref text
\DefineBibliographyStrings{english}{%
	backrefpage  = {\hspace*{-1ex}}, % Do not have space right after the bracket
	backrefpages = {\hspace*{-1ex}},
}
% Remove URLs from non-misc(if false) type bib entries
\AtEveryBibitem{%
	\ifentrytype{misc}{%
	}{%
		\clearfield{url}%
		\clearfield{urldate}%
	}%
}
%% Length modifications
\setlength{\nomlabelwidth}{7cm} % Nomenclature item separation left-right
%\setlength{\headheight}{15pt} % this was necessary and class file is modified accordingly
%\pretolerance = 150
%\emergencystretch=3em $ need a value of 4em without microtype package
%\setlength{\parskip}{1em plus 0.1em}   %spacing between paragraph
%\setlength{\nomitemsep}{-\parsep} % Nomenclature item vertical separation
%\setlength{\textheight}{\topskip + 30\baselineskip}
%% Show the box contents to diagnose overfull/underfull boxes
%\showboxbreadth=50
%\showboxdepth=50
%\typeout{The text height is \the\textheight}
%\typeout{The base line skip is \the\baselineskip}

% Additional configuration commands
\xpatchbibmacro{pageref}{parens}{brackets}{}{} % Backref uses brackets instead of paranthesis
\makenomenclature % this should be in the preamble and makeindex needs to be run afterwards see nomencl doc

\hypersetup{linkcolor=wine-stain, citecolor=ForestGreen, urlcolor=blue, colorlinks=true, linktoc= page,  pdfauthor={Ongun Arısev},
	pdftitle={Ongun Arısev Msc. Thesis},
	pdfsubject={Mode Coupling},
	pdfkeywords={Thesis, Nanophotonics, Plasmonics, SPP}} % Color the page number in TOC
%Configure the options dvipsnames for one color is used
\colorlet{wine-stain}{red!80!black} % New color
\graphicspath{{Figures/}} % Graphics path
\DeclareGraphicsExtensions{.png} % Possible graphics extensions(since compiler is pdflatex I do not use eps format)
% Set the caption font size and type
\captionsetup{font=normalsize,labelfont={bf,sf}}
\captionsetup[sub]{font=scriptsize,labelfont={bf,sf}}
\newcommand{\figref}[1]{Figure~\ref{#1}}
\newcommand{\tabref}[1]{Table~\ref{#1}}
\renewcommand{\eqref}[1]{Equation~\ref{#1}}
\newcommand{\chapref}[1]{Chapter~\ref{#1}}
%\renewcommand{\autoref}[1]{\hyperref[#1]{Example~\ref*{#1}}} % Trying to emulate autoref command
\newcommand*\chem[1]{\ensuremath{\mathrm{#1}}} % Basic chemical formula


\begin{document}

\begin{figure}
\begin{tikzpicture}
\tikzmath{\ang = 45;};
\begin{scope}[thick,decoration={
	markings,
	mark=at position 0.5 with {\arrow{latex}}}
]
\filldraw[red] (-1,0) circle (2pt)
node[anchor=east, font = \footnotesize] at (-1,-0.2) {$\mathrm{E_0}$};
\draw[dashed, red] (-1,0) --++({\ang+90}:1);
\filldraw[green] (1,0) circle (2pt)
node[anchor=west, font = \footnotesize] at (1,-0.2) {$\mathrm{E_0}$};
\draw[postaction={decorate}, red] (-1,0) --++ (\ang:2);
\draw[postaction={decorate}, green] (1,0) --++ (\ang:2);
\draw[<->, thick] (-1, -0.2) -- (1, -0.2);
\draw[dashed, green] (1,0) --++ ({\ang+90}:2.5);
\draw[<->, thick] (-1,0)++({\ang+90}:1) --++ (\ang:{2*cos(\ang)});
% 		\draw[<->, thick] (-1,0)++({\ang+90}:1) --++ (\ang:{2*cos(\ang) });
\node[anchor=north, font = \footnotesize]  at  (0, -0.2) {d=$\lambda/2$};
\end{scope}
\draw[blue, thick, dash pattern= on 25 off 7 on 50 off 7 on 10] (-2,0) -- (2, 0);
\node[anchor=west, font = \footnotesize, blue] at (1.5,-0.05) {z}; node[near start, auto] {true}
\draw[thick,blue,->] ([shift=(0:1)]1,0) arc (0:\ang:1);
% 	\draw[thick,blue,->] (2,0)  arc (0:\ang:1);
\draw (1,0)++({\ang/2}:1.2) node[rotate=\ang, anchor=base, blue, font=\normalsize]{$\theta$};
\draw ({\ang+90}:1.3) node[rotate=\ang, anchor=base, black, font=\normalsize]{$d\cos\theta$};
\end{tikzpicture}
\end{figure}
\end{document}