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singularity pull

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Jul 10th, 2017
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  1. MANPATH=/home/mathiasg/.nvm/versions/node/v5.0.0/share/man:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man:/usr/man
  2. HOSTNAME=openmind7
  3. NVM_CD_FLAGS=
  4. AFNI_PLUGINPATH=/usr/lib/afni/plugins
  5. SHELL=/bin/bash
  6. TERM=xterm-256color
  7. HISTSIZE=1000
  8. ANTSPATH=/opt/ants
  9. SSH_CLIENT=18.111.12.171 42006 22
  10. FSLMULTIFILEQUIT=TRUE
  11. NVM_PATH=/home/mathiasg/.nvm/versions/node/v5.0.0/lib/node
  12. NCARG_FONTCAPS=/usr/lib64/ncarg/fontcaps
  13. QTDIR=/usr/lib64/qt-3.3
  14. POSSUMDIR=/usr/share/fsl/5.0
  15. QTINC=/usr/lib64/qt-3.3/include
  16. SSH_TTY=/dev/pts/89
  17. LC_ALL=C.UTF-8
  18. AFNI_TTATLAS_DATASET=/usr/share/afni/atlases
  19. QT_GRAPHICSSYSTEM_CHECKED=1
  20. NVM_DIR=/home/mathiasg/.nvm
  21. USER=mathiasg
  22. LD_LIBRARY_PATH=/usr/lib/fsl/5.0::/.singularity.d/libs
  23. SINGULARITY_NAME=mriqc:latest
  24. AFNI_IMSAVE_WARNINGS=NO
  25. NCARG_GRAPHCAPS=/usr/lib64/ncarg/graphcaps
  26. PATH=/usr/local/miniconda/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
  27. MAIL=/var/spool/mail/mathiasg
  28. NVM_NODEJS_ORG_MIRROR=https://nodejs.org/dist
  29. PWD=/home/mathiasg
  30. _LMFILES_=/cm/shared/modulefiles/openmind/singularity/2.3.1
  31. NCARG_ROOT=/usr
  32. LANG=C.UTF-8
  33. MODULEPATH=/cm/shared/modulefiles:/home/software/modulefiles
  34. FSLTCLSH=/usr/bin/tclsh
  35. NCARG_DATABASE=/usr/lib64/ncarg/database
  36. LOADEDMODULES=openmind/singularity/2.3.1
  37. VAGRANT_HOME=/dev/shm/mathias/vagrant
  38. PS1=Singularity mriqc:latest:\w>
  39. FSLWISH=/usr/bin/wish
  40. HISTCONTROL=ignoredups
  41. SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass
  42. NCARG_LIB=/usr/lib64/ncarg
  43. HOME=/home/mathiasg
  44. SHLVL=2
  45. NCARG_NCARG=/usr/share/ncarg
  46. SPM_PATH=/om/project/bild/software/spm12
  47. QTLIB=/usr/lib64/qt-3.3/lib
  48. FSLDIR=/usr/share/fsl/5.0
  49. CVS_RSH=ssh
  50. SSH_CONNECTION=18.111.12.171 42006 18.13.53.52 22
  51. MODULESHOME=/usr/share/Modules
  52. NVM_BIN=/home/mathiasg/.nvm/versions/node/v5.0.0/bin
  53. LESSOPEN=||/usr/bin/lesspipe.sh %s
  54. NVM_IOJS_ORG_MIRROR=https://iojs.org/dist
  55. SINGULARITY_CONTAINER=mriqc:latest
  56. DISPLAY=localhost:31.0
  57. CRN_SHARED_DATA=/niworkflows_data
  58. FSLOUTPUTTYPE=NIFTI_GZ
  59. AFNI_MODELPATH=/usr/lib/afni/models
  60. _=/usr/bin/printenv
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