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  1.  
  2. eolianoe commented on 2014-09-03 12:57
  3. Here is a proposal for an update PKGBUILD with more functionalities : http://pastebin.com/78QBnHYM, which could be potentially merged with https://aur.archlinux.org/packages/silo-hdf5/
  4.  
  5. lobzilla commented on 2014-09-08 13:46
  6. This is being merged back into the silo repo.
  7.  
  8. ftschindler commented on 2016-01-28 22:04
  9. Building this package fails with the following error:
  10. ```
  11. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -fstack-check -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/silock silock.o -L/usr/lib -L/usr/lib/lib ../../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  12. ../../src/.libs/libsiloh5.so: undefined reference to `H5Pset_fapl_mpiposix'
  13. collect2: error: ld returned 1 exit status
  14. Makefile:403: recipe for target 'silock' failed
  15. ```
  16. This is not surprising, see e.g.: http://hdf-forum.184993.n3.nabble.com/Re-undefined-reference-to-H5Pset-fapl-mpiposix-td4027216.html
  17.  
  18. Disabling the `hdf5` dependency seems to work for me.
  19.  
  20. smradlev commented on 2016-06-13 09:16
  21. I'm getting the following error when trying to build the package. It seems it's trying to compile a sh script file with g++ for some reason.
  22.  
  23. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/csg csg.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  24. g++ -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -rdynamic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rocket-rocket.o -MD -MP -MF .deps/rocket-rocket.Tpo -c -o rocket-rocket.o `test -f 'rocket.cxx' || echo './'`rocket.cxx
  25. rocket.cxx:55:2: warning: #warning MAKE THIS CONDITIONAL LATER [-Wcpp]
  26. #warning MAKE THIS CONDITIONAL LATER
  27. ^~~~~~~
  28. In file included from /usr/include/c++/6.1.1/tuple:39:0,
  29. from /usr/include/c++/6.1.1/bits/stl_map.h:63,
  30. from /usr/include/c++/6.1.1/map:61,
  31. from rocket.cxx:66:
  32. ./array:1:2: error: invalid preprocessing directive #!
  33. #! /bin/sh
  34. ^
  35. ./array:3:3: error: invalid preprocessing directive #array
  36. # array - temporary wrapper script for .libs/array
  37. ^~~~~
  38. ./array:4:3: error: invalid preprocessing directive #Generated
  39. # Generated by ltmain.sh (GNU libtool) 2.2.6b
  40. ^~~~~~~~~
  41. ./array:6:3: error: invalid preprocessing directive #The
  42. # The array program cannot be directly executed until all the libtool
  43. ^~~
  44. ./array:7:3: error: invalid preprocessing directive #libraries
  45. # libraries that it depends on are installed.
  46. ^~~~~~~~~
  47. ./array:9:3: error: invalid preprocessing directive #This
  48. # This wrapper script should never be moved out of the build directory.
  49. ^~~~
  50. ./array:10:3: error: invalid preprocessing directive #If
  51. # If it is, it will not operate correctly.
  52. ^~
  53. ./array:12:3: error: invalid preprocessing directive #Sed
  54. # Sed substitution that helps us do robust quoting. It backslashifies
  55. ^~~
  56. ./array:13:3: error: invalid preprocessing directive #metacharacters
  57. # metacharacters that are still active within double-quoted strings.
  58. ^~~~~~~~~~~~~~
  59. ./array:17:3: error: invalid preprocessing directive #Be
  60. # Be Bourne compatible
  61. ^~
  62. ./array:21:5: error: invalid preprocessing directive #Zsh
  63. # Zsh 3.x and 4.x performs word splitting on ${1+"$@"}, which
  64. ^~~
  65. ./array:22:5: error: invalid preprocessing directive #is
  66. # is contrary to our usage. Disable this feature.
  67. ^~
  68. ./array:26:8: error: stray ‘`’ in program
  69. case `(set -o) 2/dev/null` in *posix*) set -o posix;; esac
  70. ^
  71. ./array:26:29: error: stray ‘`’ in program
  72. case `(set -o) 2/dev/null` in *posix*) set -o posix;; esac
  73. ^
  74. ./array:28:28: error: stray ‘#’ in program
  75. BIN_SH=xpg4; export BIN_SH # for Tru64
  76. ^
  77. ./array:29:29: error: stray ‘#’ in program
  78. DUALCASE=1; export DUALCASE # for MKS sh
  79. ^
  80. ./array:31:3: error: invalid preprocessing directive #The
  81. # The HP-UX ksh and POSIX shell print the target directory to stdout
  82. ^~~
  83. ./array:32:13: error: missing binary operator before token "is"
  84. # if CDPATH is set.
  85. ^~
  86. ./array:32:0: error: unterminated #if
  87. # if CDPATH is set.
  88.  
  89. In file included from /usr/include/c++/6.1.1/tuple:39:0,
  90. from /usr/include/c++/6.1.1/bits/stl_map.h:63,
  91. from /usr/include/c++/6.1.1/map:61,
  92. from rocket.cxx:66:
  93. ./array:14:1: error: ‘Xsed’ does not name a type
  94. Xsed='/usr/bin/sed -e 1s/^X//'
  95. ^~~~
  96. ./array:18:66: error: ‘then’ does not name a type
  97. if test -n "${ZSH_VERSION+set}" (emulate sh) /dev/null 21; then
  98. ^~~~
  99. ./array:26:58: error: ‘esac’ does not name a type
  100. case `(set -o) 2/dev/null` in *posix*) set -o posix;; esac
  101. ^~~~
  102. ./array:28:21: error: ‘BIN_SH’ does not name a type
  103. BIN_SH=xpg4; export BIN_SH # for Tru64
  104. ^~~~~~
  105. ./array:29:20: error: ‘DUALCASE’ does not name a type
  106. DUALCASE=1; export DUALCASE # for MKS sh
  107. ^~~~~~~~
  108. In file included from /usr/include/c++/6.1.1/bits/stl_map.h:63:0,
  109. from /usr/include/c++/6.1.1/map:61,
  110. from rocket.cxx:66:
  111. /usr/include/c++/6.1.1/tuple:71:33: error: expected ‘)’ before ‘,’ token
  112. _Head_base(allocator_arg_t, __uses_alloc0)
  113. ^
  114. /usr/include/c++/6.1.1/tuple:75:28: error: expected ‘)’ before ‘,’ token
  115. _Head_base(allocator_arg_t, __uses_alloc1_Alloc __a)
  116. ^
  117. /usr/include/c++/6.1.1/tuple:79:28: error: expected ‘)’ before ‘,’ token
  118. _Head_base(allocator_arg_t, __uses_alloc2_Alloc __a)
  119. ^
  120. /usr/include/c++/6.1.1/tuple:83:26: error: expected ‘)’ before ‘,’ token
  121. _Head_base(__uses_alloc0, _UHead __uhead)
  122. ^
  123. /usr/include/c++/6.1.1/tuple:87:26: error: expected ‘)’ before ‘’ token
  124. _Head_base(__uses_alloc1_Alloc __a, _UHead __uhead)
  125. ^
  126. /usr/include/c++/6.1.1/tuple:91:26: error: expected ‘)’ before ‘’ token
  127. _Head_base(__uses_alloc2_Alloc __a, _UHead __uhead)
  128. ^
  129. /usr/include/c++/6.1.1/tuple:117:33: error: expected ‘)’ before ‘,’ token
  130. _Head_base(allocator_arg_t, __uses_alloc0)
  131. ^
  132. /usr/include/c++/6.1.1/tuple:121:28: error: expected ‘)’ before ‘,’ token
  133. _Head_base(allocator_arg_t, __uses_alloc1_Alloc __a)
  134. ^
  135. /usr/include/c++/6.1.1/tuple:125:28: error: expected ‘)’ before ‘,’ token
  136. _Head_base(allocator_arg_t, __uses_alloc2_Alloc __a)
  137. ^
  138. /usr/include/c++/6.1.1/tuple:129:26: error: expected ‘)’ before ‘,’ token
  139. _Head_base(__uses_alloc0, _UHead __uhead)
  140. ^
  141. /usr/include/c++/6.1.1/tuple:133:26: error: expected ‘)’ before ‘’ token
  142. _Head_base(__uses_alloc1_Alloc __a, _UHead __uhead)
  143. ^
  144. /usr/include/c++/6.1.1/tuple:138:26: error: expected ‘)’ before ‘’ token
  145. _Head_base(__uses_alloc2_Alloc __a, _UHead __uhead)
  146. ^
  147. /usr/include/c++/6.1.1/tuple:237:30: error: expected ‘)’ before ‘__tag’
  148. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a)
  149. ^~~~~
  150. /usr/include/c++/6.1.1/tuple:242:30: error: expected ‘)’ before ‘__tag’
  151. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  152. ^~~~~
  153. /usr/include/c++/6.1.1/tuple:250:30: error: expected ‘)’ before ‘__tag’
  154. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  155. ^~~~~
  156. /usr/include/c++/6.1.1/tuple:257:37: error: expected ‘)’ before ‘__tag’
  157. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  158. ^~~~~
  159. /usr/include/c++/6.1.1/tuple:263:30: error: expected ‘)’ before ‘__tag’
  160. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  161. ^~~~~
  162. /usr/include/c++/6.1.1/tuple:270:30: error: expected ‘)’ before ‘__tag’
  163. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  164. ^~~~~
  165. /usr/include/c++/6.1.1/tuple:278:30: error: expected ‘)’ before ‘__tag’
  166. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  167. ^~~~~
  168. /usr/include/c++/6.1.1/tuple:380:30: error: expected ‘)’ before ‘__tag’
  169. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a)
  170. ^~~~~
  171. /usr/include/c++/6.1.1/tuple:384:30: error: expected ‘)’ before ‘__tag’
  172. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  173. ^~~~~
  174. /usr/include/c++/6.1.1/tuple:389:30: error: expected ‘)’ before ‘__tag’
  175. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  176. ^~~~~
  177. /usr/include/c++/6.1.1/tuple:395:37: error: expected ‘)’ before ‘__tag’
  178. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  179. ^~~~~
  180. /usr/include/c++/6.1.1/tuple:400:30: error: expected ‘)’ before ‘__tag’
  181. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  182. ^~~~~
  183. /usr/include/c++/6.1.1/tuple:406:30: error: expected ‘)’ before ‘__tag’
  184. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  185. ^~~~~
  186. /usr/include/c++/6.1.1/tuple:412:30: error: expected ‘)’ before ‘__tag’
  187. _Tuple_impl(allocator_arg_t __tag, const _Alloc __a,
  188. ^~~~~
  189. /usr/include/c++/6.1.1/tuple:711:24: error: expected ‘)’ before ‘__tag’
  190. tuple(allocator_arg_t __tag, const _Alloc __a)
  191. ^~~~~
  192. /usr/include/c++/6.1.1/tuple:721:24: error: expected ‘)’ before ‘__tag’
  193. tuple(allocator_arg_t __tag, const _Alloc __a,
  194. ^~~~~
  195. /usr/include/c++/6.1.1/tuple:732:33: error: expected ‘)’ before ‘__tag’
  196. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  197. ^~~~~
  198. /usr/include/c++/6.1.1/tuple:742:24: error: expected ‘)’ before ‘__tag’
  199. tuple(allocator_arg_t __tag, const _Alloc __a,
  200. ^~~~~
  201. /usr/include/c++/6.1.1/tuple:753:33: error: expected ‘)’ before ‘__tag’
  202. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  203. ^~~~~
  204. /usr/include/c++/6.1.1/tuple:759:24: error: expected ‘)’ before ‘__tag’
  205. tuple(allocator_arg_t __tag, const _Alloc __a, const tuple __in)
  206. ^~~~~
  207. /usr/include/c++/6.1.1/tuple:763:24: error: expected ‘)’ before ‘__tag’
  208. tuple(allocator_arg_t __tag, const _Alloc __a, tuple __in)
  209. ^~~~~
  210. /usr/include/c++/6.1.1/tuple:772:24: error: expected ‘)’ before ‘__tag’
  211. tuple(allocator_arg_t __tag, const _Alloc __a,
  212. ^~~~~
  213. /usr/include/c++/6.1.1/tuple:784:33: error: expected ‘)’ before ‘__tag’
  214. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  215. ^~~~~
  216. /usr/include/c++/6.1.1/tuple:796:24: error: expected ‘)’ before ‘__tag’
  217. tuple(allocator_arg_t __tag, const _Alloc __a,
  218. ^~~~~
  219. /usr/include/c++/6.1.1/tuple:808:33: error: expected ‘)’ before ‘__tag’
  220. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  221. ^~~~~
  222. /usr/include/c++/6.1.1/tuple:1021:24: error: expected ‘)’ before ‘__tag’
  223. tuple(allocator_arg_t __tag, const _Alloc __a)
  224. ^~~~~
  225. /usr/include/c++/6.1.1/tuple:1032:24: error: expected ‘)’ before ‘__tag’
  226. tuple(allocator_arg_t __tag, const _Alloc __a,
  227. ^~~~~
  228. /usr/include/c++/6.1.1/tuple:1044:33: error: expected ‘)’ before ‘__tag’
  229. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  230. ^~~~~
  231. /usr/include/c++/6.1.1/tuple:1054:24: error: expected ‘)’ before ‘__tag’
  232. tuple(allocator_arg_t __tag, const _Alloc __a, _U1 __a1, _U2 __a2)
  233. ^~~~~
  234. /usr/include/c++/6.1.1/tuple:1064:33: error: expected ‘)’ before ‘__tag’
  235. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  236. ^~~~~
  237. /usr/include/c++/6.1.1/tuple:1070:24: error: expected ‘)’ before ‘__tag’
  238. tuple(allocator_arg_t __tag, const _Alloc __a, const tuple __in)
  239. ^~~~~
  240. /usr/include/c++/6.1.1/tuple:1074:24: error: expected ‘)’ before ‘__tag’
  241. tuple(allocator_arg_t __tag, const _Alloc __a, tuple __in)
  242. ^~~~~
  243. /usr/include/c++/6.1.1/tuple:1083:24: error: expected ‘)’ before ‘__tag’
  244. tuple(allocator_arg_t __tag, const _Alloc __a,
  245. ^~~~~
  246. /usr/include/c++/6.1.1/tuple:1095:33: error: expected ‘)’ before ‘__tag’
  247. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  248. ^~~~~
  249. /usr/include/c++/6.1.1/tuple:1107:24: error: expected ‘)’ before ‘__tag’
  250. tuple(allocator_arg_t __tag, const _Alloc __a, tuple_U1, _U2 __in)
  251. ^~~~~
  252. /usr/include/c++/6.1.1/tuple:1117:33: error: expected ‘)’ before ‘__tag’
  253. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  254. ^~~~~
  255. /usr/include/c++/6.1.1/tuple:1128:31: error: expected ‘)’ before ‘__tag’
  256. tuple(allocator_arg_t __tag, const _Alloc __a,
  257. ^~~~~
  258. /usr/include/c++/6.1.1/tuple:1138:40: error: expected ‘)’ before ‘__tag’
  259. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  260. ^~~~~
  261. /usr/include/c++/6.1.1/tuple:1148:31: error: expected ‘)’ before ‘__tag’
  262. tuple(allocator_arg_t __tag, const _Alloc __a, pair_U1, _U2 __in)
  263. ^~~~~
  264. /usr/include/c++/6.1.1/tuple:1158:40: error: expected ‘)’ before ‘__tag’
  265. explicit tuple(allocator_arg_t __tag, const _Alloc __a,
  266. ^~~~~
  267. rocket.cxx:155:1: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  268. };
  269. ^
  270. rocket.cxx:155:1: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  271. rocket.cxx:155:1: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  272. rocket.cxx:155:1: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  273. rocket.cxx:155:1: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  274. rocket.cxx: In function ‘int WriteAllFormats(int, char**)’:
  275. rocket.cxx:744:57: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  276. char *dirs[] = {".", "../..", ".libs", "../../.libs"};
  277. ^
  278. rocket.cxx:744:57: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  279. rocket.cxx:744:57: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  280. rocket.cxx:744:57: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
  281. make[1]: *** [Makefile:1623: rocket-rocket.o] Error 1
  282. make[1]: Leaving directory '/home/user/Build/silo/src/silo-4.10.2/tests'
  283. make: *** [Makefile:1777: check-am] Error 2
  284. == ERROR: A failure occurred in check().
  285. Aborting...
  286.  
  287. eolianoe commented on 2016-06-13 10:01
  288. @smradlev: building fine here even in a clean chroot, could give me the full build log by mail? Also next time please do not paste full log in comments and edit your comments to make it easier to read.
  289.  
  290. EDIT: Your build failure seems to come from hdf5-openmpi, added a patch to get it works with it
  291.  
  292. silo 4.10.2-5 (2016-06-13 11:11)
  293. ( Unsupported package: Potentially dangerous ! )
  294.  
  295. - qt4 (already installed)
  296. - python2 (already installed)
  297. - szip (already installed)
  298. - hdf5 (already installed)
  299. - gcc-fortran (already installed) [makedepend]
  300.  
  301.  
  302.  
  303. patching file tests/Makefile.in
  304. patching file tests/testsuite.at
  305. patching file src/hdf5_drv/silo_hdf5.c
  306. Hunk #1 succeeded at 4753 (offset 36 lines).
  307. patch unexpectedly ends in middle of line
  308. Hunk #2 succeeded at 5060 with fuzz 1 (offset 106 lines).
  309. checking for a BSD-compatible install... /usr/bin/install -c
  310. checking whether build environment is sane... yes
  311. checking for a thread-safe mkdir -p... /usr/sbin/mkdir -p
  312. checking for gawk... gawk
  313. checking whether make sets $(MAKE)... yes
  314. checking whether to enable maintainer-specific portions of Makefiles... no
  315. checking build system type... x86_64-unknown-linux-gnu
  316. checking host system type... x86_64-unknown-linux-gnu
  317. checking what version the package is... 4.10.2
  318. checking for site config host file... no
  319. checking for config-site x86_64-unknown-linux-gnu... no
  320. checking for config-site x86_64-unknown-linux-gnu... no
  321. checking for config-site unknown-linux-gnu... no
  322. checking for config-site unknown-linux-gnu... no
  323. checking for config-site x86_64-linux-gnu... no
  324. checking for config-site x86_64-linux-gnu... no
  325. checking for config-site x86_64-unknown... no
  326. checking for config-site linux-gnu... no
  327. checking for config-site linux-gnu... no
  328. checking for config-site unknown... no
  329. checking for config-site x86_64... found
  330. checking for g++... g++
  331. checking for C++ compiler default output file name... a.out
  332. checking whether the C++ compiler works... yes
  333. checking whether we are cross compiling... no
  334. checking for suffix of executables...
  335. checking for suffix of object files... o
  336. checking whether we are using the GNU C++ compiler... yes
  337. checking whether g++ accepts -g... yes
  338. checking for style of include used by make... GNU
  339. checking dependency style of g++... gcc3
  340. checking for gcc... gcc
  341. checking whether we are using the GNU C compiler... yes
  342. checking whether gcc accepts -g... yes
  343. checking for gcc option to accept ISO C89... none needed
  344. checking dependency style of gcc... gcc3
  345. checking how to run the C preprocessor... gcc -E
  346. checking for gfortran... gfortran
  347. checking whether we are using the GNU Fortran compiler... yes
  348. checking whether gfortran accepts -g... yes
  349. checking for g77... no
  350. checking for xlf... no
  351. checking for f77... no
  352. checking for frt... no
  353. checking for pgf77... no
  354. checking for cf77... no
  355. checking for fort77... no
  356. checking for fl32... no
  357. checking for af77... no
  358. checking for xlf90... no
  359. checking for f90... no
  360. checking for pgf90... no
  361. checking for pghpf... no
  362. checking for epcf90... no
  363. checking for gfortran... gfortran
  364. checking whether we are using the GNU Fortran 77 compiler... yes
  365. checking whether gfortran accepts -g... yes
  366. checking how to get verbose linking output from gfortran... -v
  367. checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1 -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../.. -lgfortran -lm -lquadmath
  368. checking for dummy main to link with Fortran libraries... none
  369. checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
  370. checking whether make sets $(MAKE)... (cached) yes
  371. checking for a sed that does not truncate output... /usr/sbin/sed
  372. checking for grep that handles long lines and -e... /usr/sbin/grep
  373. checking for egrep... /usr/sbin/grep -E
  374. checking for fgrep... /usr/sbin/grep -F
  375. checking for ld used by gcc... /usr/sbin/ld
  376. checking if the linker (/usr/sbin/ld) is GNU ld... yes
  377. checking for BSD- or MS-compatible name lister (nm)... /usr/sbin/nm -B
  378. checking the name lister (/usr/sbin/nm -B) interface... BSD nm
  379. checking whether ln -s works... yes
  380. checking the maximum length of command line arguments... 1572864
  381. checking whether the shell understands some XSI constructs... yes
  382. checking whether the shell understands "+="... yes
  383. checking for /usr/sbin/ld option to reload object files... -r
  384. checking for objdump... objdump
  385. checking how to recognize dependent libraries... pass_all
  386. checking for ar... ar
  387. checking for strip... strip
  388. checking for ranlib... ranlib
  389. checking command to parse /usr/sbin/nm -B output from gcc object... ok
  390. checking for ANSI C header files... yes
  391. checking for sys/types.h... yes
  392. checking for sys/stat.h... yes
  393. checking for stdlib.h... yes
  394. checking for string.h... yes
  395. checking for memory.h... yes
  396. checking for strings.h... yes
  397. checking for inttypes.h... yes
  398. checking for stdint.h... yes
  399. checking for unistd.h... yes
  400. checking for dlfcn.h... yes
  401. checking whether we are using the GNU C++ compiler... (cached) yes
  402. checking whether g++ accepts -g... (cached) yes
  403. checking dependency style of g++... (cached) gcc3
  404. checking how to run the C++ preprocessor... g++ -E
  405. checking whether we are using the GNU Fortran 77 compiler... (cached) yes
  406. checking whether gfortran accepts -g... (cached) yes
  407. checking whether we are using the GNU Fortran compiler... (cached) yes
  408. checking whether gfortran accepts -g... (cached) yes
  409. checking for objdir... .libs
  410. checking if gcc supports -fno-rtti -fno-exceptions... no
  411. checking for gcc option to produce PIC... -fPIC -DPIC
  412. checking if gcc PIC flag -fPIC -DPIC works... yes
  413. checking if gcc static flag -static works... yes
  414. checking if gcc supports -c -o file.o... yes
  415. checking if gcc supports -c -o file.o... (cached) yes
  416. checking whether the gcc linker (/usr/sbin/ld -m elf_x86_64) supports shared libraries... yes
  417. checking whether -lc should be explicitly linked in... no
  418. checking dynamic linker characteristics... GNU/Linux ld.so
  419. checking how to hardcode library paths into programs... immediate
  420. checking whether stripping libraries is possible... yes
  421. checking if libtool supports shared libraries... yes
  422. checking whether to build shared libraries... yes
  423. checking whether to build static libraries... yes
  424. checking for ld used by g++... /usr/sbin/ld -m elf_x86_64
  425. checking if the linker (/usr/sbin/ld -m elf_x86_64) is GNU ld... yes
  426. checking whether the g++ linker (/usr/sbin/ld -m elf_x86_64) supports shared libraries... yes
  427. checking for g++ option to produce PIC... -fPIC -DPIC
  428. checking if g++ PIC flag -fPIC -DPIC works... yes
  429. checking if g++ static flag -static works... yes
  430. checking if g++ supports -c -o file.o... yes
  431. checking if g++ supports -c -o file.o... (cached) yes
  432. checking whether the g++ linker (/usr/sbin/ld -m elf_x86_64) supports shared libraries... yes
  433. checking dynamic linker characteristics... GNU/Linux ld.so
  434. checking how to hardcode library paths into programs... immediate
  435. checking if libtool supports shared libraries... yes
  436. checking whether to build shared libraries... yes
  437. checking whether to build static libraries... yes
  438. checking for gfortran option to produce PIC... -fPIC
  439. checking if gfortran PIC flag -fPIC works... yes
  440. checking if gfortran static flag -static works... no
  441. checking if gfortran supports -c -o file.o... yes
  442. checking if gfortran supports -c -o file.o... (cached) yes
  443. checking whether the gfortran linker (/usr/sbin/ld -m elf_x86_64) supports shared libraries... yes
  444. checking dynamic linker characteristics... GNU/Linux ld.so
  445. checking how to hardcode library paths into programs... immediate
  446. checking if libtool supports shared libraries... yes
  447. checking whether to build shared libraries... yes
  448. checking whether to build static libraries... yes
  449. checking for gfortran option to produce PIC... -fPIC
  450. checking if gfortran PIC flag -fPIC works... yes
  451. checking if gfortran static flag -static works... no
  452. checking if gfortran supports -c -o file.o... yes
  453. checking if gfortran supports -c -o file.o... (cached) yes
  454. checking whether the gfortran linker (/usr/sbin/ld -m elf_x86_64) supports shared libraries... yes
  455. checking dynamic linker characteristics... GNU/Linux ld.so
  456. checking how to hardcode library paths into programs... immediate
  457. checking for library containing strerror... none required
  458. checking for hzip... found
  459. checking zlib.h usability... yes
  460. checking zlib.h presence... yes
  461. checking for zlib.h... yes
  462. checking for inflateEnd in -lz... yes
  463. checking for fpzip... found
  464. checking compiler optimization... enabled
  465. checking whether C compiler accepts "-D_LARGEFILE_SOURCE"... yes
  466. checking whether C compiler accepts "-D_LARGEFILE64_SOURCE"... yes
  467. checking whether C compiler accepts "-D_FILE_OFFSET_BITS=64"... yes
  468. checking whether C compiler accepts "-Wdeclaration-after-statement"... yes
  469. checking size of off64_t... 8
  470. checking for a BSD-compatible install... /usr/bin/install -c
  471. checking sys/time.h usability... yes
  472. checking sys/time.h presence... yes
  473. checking for sys/time.h... yes
  474. checking stdarg.h usability... yes
  475. checking stdarg.h presence... yes
  476. checking for stdarg.h... yes
  477. checking for sys/stat.h... (cached) yes
  478. checking fcntl.h usability... yes
  479. checking fcntl.h presence... yes
  480. checking for fcntl.h... yes
  481. checking sys/fcntl.h usability... yes
  482. checking sys/fcntl.h presence... yes
  483. checking for sys/fcntl.h... yes
  484. checking fnmatch.h usability... yes
  485. checking fnmatch.h presence... yes
  486. checking for fnmatch.h... yes
  487. checking ieeefp.h usability... no
  488. checking ieeefp.h presence... no
  489. checking for ieeefp.h... no
  490. checking for sys/types.h... (cached) yes
  491. checking for unistd.h... (cached) yes
  492. checking for ANSI C header files... (cached) yes
  493. checking for fclose function pointer... yes
  494. checking for fflush function pointer... yes
  495. checking for fopen function pointer... yes
  496. checking for fprintf function pointer... yes
  497. checking for fread function pointer... yes
  498. checking for fseek function pointer... yes
  499. checking for setvbuf function pointer... yes
  500. checking for ftell function pointer... yes
  501. checking for fwrite function pointer... yes
  502. checking for memmove... yes
  503. checking for fnmatch... yes
  504. checking for isnan... yes
  505. checking for fpclass... no
  506. checking for strerror... yes
  507. checking if setjmp and longjmp work... yes
  508. checking for X... libraries , headers
  509. checking for gethostbyname... yes
  510. checking for connect... yes
  511. checking for remove... yes
  512. checking for shmat... yes
  513. checking for IceConnectionNumber in -lICE... yes
  514. checking for Qt... yes:
  515. QT_CXXFLAGS=-I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui
  516. QT_DIR=
  517. QT_LIBS=-L/usr/lib -l{QtCore,QtGui} -lSM -lICE -lX11 -lXext -lXmu -lXt -lXi
  518. QT_UIC=/usr/lib/qt4/bin/uic
  519. QT_MOC=/usr/lib/qt4/bin/moc
  520. QT_LRELEASE=/usr/lib/qt4/bin/lrelease
  521. QT_LUPDATE=/usr/lib/qt4/bin/lupdate
  522. checking correct functioning of Qt installation... success
  523. checking for cos in -lm... yes
  524. checking for SZ_BufftoBuffCompress in -lsz... yes
  525. checking for hdf5... configure: checking for hdf5 and supporting libraries...
  526. checking hdf5.h usability... yes
  527. checking hdf5.h presence... yes
  528. checking for hdf5.h... yes
  529. checking for H5open... yes
  530. checking for a readline compatible library... -lreadline
  531. checking readline.h usability... no
  532. checking readline.h presence... no
  533. checking for readline.h... no
  534. checking readline/readline.h usability... yes
  535. checking readline/readline.h presence... yes
  536. checking for readline/readline.h... yes
  537. checking whether readline supports history... yes
  538. checking history.h usability... no
  539. checking history.h presence... no
  540. checking for history.h... no
  541. checking readline/history.h usability... yes
  542. checking readline/history.h presence... yes
  543. checking for readline/history.h... yes
  544. checking whether /usr/bin/python2 version >= 2.1... yes
  545. checking for /usr/bin/python2 version... 2.7
  546. checking for /usr/bin/python2 platform... linux2
  547. checking for /usr/bin/python2 script directory... ${prefix}/lib/python2.7/site-packages
  548. checking for /usr/bin/python2 extension module directory... ${exec_prefix}/lib/python2.7/site-packages
  549. checking for Python include path... -I/usr/include/python2.7
  550. configure: creating ./config.status
  551. config.status: creating Makefile
  552. config.status: creating SiloWindows/Makefile
  553. config.status: creating svn_bin/Makefile
  554. config.status: creating config/Makefile
  555. config.status: creating config-site/Makefile
  556. config.status: creating docs/Makefile
  557. config.status: creating src/Makefile
  558. config.status: creating src/score/Makefile
  559. config.status: creating src/pdb/Makefile
  560. config.status: creating src/silo/Makefile
  561. config.status: creating src/silo/silo.h
  562. config.status: creating src/debug/Makefile
  563. config.status: creating src/netcdf/Makefile
  564. config.status: creating src/pdb_drv/Makefile
  565. config.status: creating src/pdbp_drv/Makefile
  566. config.status: creating src/hdf5_drv/Makefile
  567. config.status: creating src/taurus/Makefile
  568. config.status: creating src/unknown/Makefile
  569. config.status: creating src/filters/Makefile
  570. config.status: creating tests/Makefile
  571. config.status: creating tools/Makefile
  572. config.status: creating tools/browser/Makefile
  573. config.status: creating tools/python/Makefile
  574. config.status: creating tools/silex/Makefile
  575. config.status: creating tools/silock/Makefile
  576. config.status: creating tools/json/Makefile
  577. config.status: creating tools/mapred/Makefile
  578. config.status: creating src/hzip/Makefile
  579. config.status: creating src/fpzip/Makefile
  580. config.status: creating src/libsiloh5.settings
  581. config.status: creating config.h
  582. config.status: executing tests/atconfig commands
  583. config.status: executing depfiles commands
  584. config.status: executing libtool commands
  585.  
  586.  
  587. SUMMARY OF THE Silo with HDF5 CONFIGURATION
  588. =================================
  589.  
  590. Silo Version: 4.10.2
  591. Configured on: Thu Jul 28 22:29:40 CEST 2016
  592. Configured by: mattia@feynman
  593. Configure command: ./configure '--prefix=/usr' '--enable-shared' '--enable-optimization' '--enable-fortran' '--enable-browser' '--enable-silex' '--with-Qt-dir=' '--with-Qt-include-dir=/usr/include/qt4' '--with-Qt-bin-dir=/usr/lib/qt4/bin' '--with-Qt-lib-dir=/usr/lib' '--with-Qt-lib={QtCore,QtGui}' '--with-zlib=/usr/include,/usr/lib' '--with-hdf5=/usr/include,/usr/lib' '--enable-pythonmodule' '--with-szlib=/usr/lib' '--enable-install-lite-headers' '--enable-hzip' '--enable-fpzip' 'CXXFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong' 'LDFLAGS=-Wl,-O1,--sort-common,--as-needed,-z,relro' 'CPPFLAGS=-D_FORTIFY_SOURCE=2' 'CFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong'
  594. Host system: x86_64-unknown-linux-gnu
  595. Build system: x86_64-unknown-linux-gnu
  596. Installation point: /usr
  597. Source directory: @UsingSrcDir@
  598. Archiver: ar
  599. Ranlib: ranlib
  600.  
  601. Configure Summary
  602. Compiling Options:
  603. C Compiler /usr/sbin/gcc
  604. CPPFLAGS -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include
  605. CFLAGS -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement
  606. LDFLAGS -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib
  607. LIBS -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  608. Languages:
  609. C++ Compiler /usr/sbin/g++
  610. CXXFLAGS -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong
  611. Fortran Compiler /usr/sbin/gfortran
  612. FCFLAGS -g -O2
  613. FCLIBS -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1 -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../.. -lgfortran -lm -lquadmath
  614. Features:
  615. Browser @UsingBrowser@
  616. Readline @UsingReadline@
  617. HDF5 @UsingHDF5@
  618. Silex @UsingSilex@
  619. Qt @UsingQt@
  620. Qt moc Compiler /usr/lib/qt4/bin/moc
  621. Qt CXXFLAGS -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui
  622. Qt LIBS -L/usr/lib -l{QtCore,QtGui} -lSM -lICE -lX11 -lXext -lXmu -lXt -lXi
  623. Python @UsingPython@
  624. Python Compiler /usr/bin/python2
  625. Python CPPFLAGS -I/usr/include/python2.7
  626. make all-recursive
  627. make[1]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2'
  628. Making all in .
  629. make[2]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2'
  630. make[2]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2'
  631. Making all in src
  632. make[2]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src'
  633. make all-recursive
  634. make[3]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src'
  635. Making all in score
  636. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/score'
  637. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT memmove.lo -MD -MP -MF .deps/memmove.Tpo -c -o memmove.lo memmove.c
  638. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT memmove.lo -MD -MP -MF .deps/memmove.Tpo -c memmove.c -fPIC -DPIC -o .libs/memmove.o
  639. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT memmove.lo -MD -MP -MF .deps/memmove.Tpo -c memmove.c -o memmove.o >/dev/null 2>&1
  640. mv -f .deps/memmove.Tpo .deps/memmove.Plo
  641. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scctla.lo -MD -MP -MF .deps/scctla.Tpo -c -o scctla.lo scctla.c
  642. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scctla.lo -MD -MP -MF .deps/scctla.Tpo -c scctla.c -fPIC -DPIC -o .libs/scctla.o
  643. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scctla.lo -MD -MP -MF .deps/scctla.Tpo -c scctla.c -o scctla.o >/dev/null 2>&1
  644. mv -f .deps/scctla.Tpo .deps/scctla.Plo
  645. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scctl.lo -MD -MP -MF .deps/scctl.Tpo -c -o scctl.lo scctl.c
  646. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scctl.lo -MD -MP -MF .deps/scctl.Tpo -c scctl.c -fPIC -DPIC -o .libs/scctl.o
  647. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scctl.lo -MD -MP -MF .deps/scctl.Tpo -c scctl.c -o scctl.o >/dev/null 2>&1
  648. mv -f .deps/scctl.Tpo .deps/scctl.Plo
  649. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT schash.lo -MD -MP -MF .deps/schash.Tpo -c -o schash.lo schash.c
  650. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT schash.lo -MD -MP -MF .deps/schash.Tpo -c schash.c -fPIC -DPIC -o .libs/schash.o
  651. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT schash.lo -MD -MP -MF .deps/schash.Tpo -c schash.c -o schash.o >/dev/null 2>&1
  652. mv -f .deps/schash.Tpo .deps/schash.Plo
  653. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scstr.lo -MD -MP -MF .deps/scstr.Tpo -c -o scstr.lo scstr.c
  654. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scstr.lo -MD -MP -MF .deps/scstr.Tpo -c scstr.c -fPIC -DPIC -o .libs/scstr.o
  655. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT scstr.lo -MD -MP -MF .deps/scstr.Tpo -c scstr.c -o scstr.o >/dev/null 2>&1
  656. mv -f .deps/scstr.Tpo .deps/scstr.Plo
  657. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_score.la memmove.lo scctla.lo scctl.lo schash.lo scstr.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  658. libtool: link: ar cru .libs/libsilo_score.a .libs/memmove.o .libs/scctla.o .libs/scctl.o .libs/schash.o .libs/scstr.o
  659. libtool: link: ranlib .libs/libsilo_score.a
  660. libtool: link: ( cd ".libs" && rm -f "libsilo_score.la" && ln -s "../libsilo_score.la" "libsilo_score.la" )
  661. if test ! -e lite_score.h; then ../../config/mklite score.h lite_score.h; fi
  662. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/score'
  663. Making all in pdb
  664. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb'
  665. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT detect.o -MD -MP -MF .deps/detect.Tpo -c -o detect.o detect.c
  666. mv -f .deps/detect.Tpo .deps/detect.Po
  667. gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -o detect detect.o
  668. ./detect >> pdform.h
  669. make all-am
  670. make[5]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb'
  671. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdb.lo -MD -MP -MF .deps/pdb.Tpo -c -o pdb.lo pdb.c
  672. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdb.lo -MD -MP -MF .deps/pdb.Tpo -c pdb.c -fPIC -DPIC -o .libs/pdb.o
  673. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdb.lo -MD -MP -MF .deps/pdb.Tpo -c pdb.c -o pdb.o >/dev/null 2>&1
  674. mv -f .deps/pdb.Tpo .deps/pdb.Plo
  675. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbdir.lo -MD -MP -MF .deps/pdbdir.Tpo -c -o pdbdir.lo pdbdir.c
  676. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbdir.lo -MD -MP -MF .deps/pdbdir.Tpo -c pdbdir.c -fPIC -DPIC -o .libs/pdbdir.o
  677. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbdir.lo -MD -MP -MF .deps/pdbdir.Tpo -c pdbdir.c -o pdbdir.o >/dev/null 2>&1
  678. mv -f .deps/pdbdir.Tpo .deps/pdbdir.Plo
  679. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbio.lo -MD -MP -MF .deps/pdbio.Tpo -c -o pdbio.lo pdbio.c
  680. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbio.lo -MD -MP -MF .deps/pdbio.Tpo -c pdbio.c -fPIC -DPIC -o .libs/pdbio.o
  681. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbio.lo -MD -MP -MF .deps/pdbio.Tpo -c pdbio.c -o pdbio.o >/dev/null 2>&1
  682. mv -f .deps/pdbio.Tpo .deps/pdbio.Plo
  683. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbmm.lo -MD -MP -MF .deps/pdbmm.Tpo -c -o pdbmm.lo pdbmm.c
  684. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbmm.lo -MD -MP -MF .deps/pdbmm.Tpo -c pdbmm.c -fPIC -DPIC -o .libs/pdbmm.o
  685. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbmm.lo -MD -MP -MF .deps/pdbmm.Tpo -c pdbmm.c -o pdbmm.o >/dev/null 2>&1
  686. mv -f .deps/pdbmm.Tpo .deps/pdbmm.Plo
  687. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbx.lo -MD -MP -MF .deps/pdbx.Tpo -c -o pdbx.lo pdbx.c
  688. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbx.lo -MD -MP -MF .deps/pdbx.Tpo -c pdbx.c -fPIC -DPIC -o .libs/pdbx.o
  689. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdbx.lo -MD -MP -MF .deps/pdbx.Tpo -c pdbx.c -o pdbx.o >/dev/null 2>&1
  690. mv -f .deps/pdbx.Tpo .deps/pdbx.Plo
  691. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdconv.lo -MD -MP -MF .deps/pdconv.Tpo -c -o pdconv.lo pdconv.c
  692. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdconv.lo -MD -MP -MF .deps/pdconv.Tpo -c pdconv.c -fPIC -DPIC -o .libs/pdconv.o
  693. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdconv.lo -MD -MP -MF .deps/pdconv.Tpo -c pdconv.c -o pdconv.o >/dev/null 2>&1
  694. mv -f .deps/pdconv.Tpo .deps/pdconv.Plo
  695. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdlow.lo -MD -MP -MF .deps/pdlow.Tpo -c -o pdlow.lo pdlow.c
  696. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdlow.lo -MD -MP -MF .deps/pdlow.Tpo -c pdlow.c -fPIC -DPIC -o .libs/pdlow.o
  697. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdlow.lo -MD -MP -MF .deps/pdlow.Tpo -c pdlow.c -o pdlow.o >/dev/null 2>&1
  698. mv -f .deps/pdlow.Tpo .deps/pdlow.Plo
  699. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdmemb.lo -MD -MP -MF .deps/pdmemb.Tpo -c -o pdmemb.lo pdmemb.c
  700. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdmemb.lo -MD -MP -MF .deps/pdmemb.Tpo -c pdmemb.c -fPIC -DPIC -o .libs/pdmemb.o
  701. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdmemb.lo -MD -MP -MF .deps/pdmemb.Tpo -c pdmemb.c -o pdmemb.o >/dev/null 2>&1
  702. mv -f .deps/pdmemb.Tpo .deps/pdmemb.Plo
  703. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdpath.lo -MD -MP -MF .deps/pdpath.Tpo -c -o pdpath.lo pdpath.c
  704. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdpath.lo -MD -MP -MF .deps/pdpath.Tpo -c pdpath.c -fPIC -DPIC -o .libs/pdpath.o
  705. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdpath.lo -MD -MP -MF .deps/pdpath.Tpo -c pdpath.c -o pdpath.o >/dev/null 2>&1
  706. mv -f .deps/pdpath.Tpo .deps/pdpath.Plo
  707. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdrdwr.lo -MD -MP -MF .deps/pdrdwr.Tpo -c -o pdrdwr.lo pdrdwr.c
  708. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdrdwr.lo -MD -MP -MF .deps/pdrdwr.Tpo -c pdrdwr.c -fPIC -DPIC -o .libs/pdrdwr.o
  709. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/score -I../../src/silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT pdrdwr.lo -MD -MP -MF .deps/pdrdwr.Tpo -c pdrdwr.c -o pdrdwr.o >/dev/null 2>&1
  710. mv -f .deps/pdrdwr.Tpo .deps/pdrdwr.Plo
  711. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_pdb.la pdb.lo pdbdir.lo pdbio.lo pdbmm.lo pdbx.lo pdconv.lo pdlow.lo pdmemb.lo pdpath.lo pdrdwr.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  712. libtool: link: ar cru .libs/libsilo_pdb.a .libs/pdb.o .libs/pdbdir.o .libs/pdbio.o .libs/pdbmm.o .libs/pdbx.o .libs/pdconv.o .libs/pdlow.o .libs/pdmemb.o .libs/pdpath.o .libs/pdrdwr.o
  713. libtool: link: ranlib .libs/libsilo_pdb.a
  714. libtool: link: ( cd ".libs" && rm -f "libsilo_pdb.la" && ln -s "../libsilo_pdb.la" "libsilo_pdb.la" )
  715. if test ! -e lite_pdb.h; then ../../config/mklite pdb.h lite_pdb.h; fi
  716. make[5]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb'
  717. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb'
  718. Making all in silo
  719. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/silo'
  720. make all-am
  721. make[5]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/silo'
  722. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT alloc.lo -MD -MP -MF .deps/alloc.Tpo -c -o alloc.lo alloc.c
  723. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT alloc.lo -MD -MP -MF .deps/alloc.Tpo -c alloc.c -fPIC -DPIC -o .libs/alloc.o
  724. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT alloc.lo -MD -MP -MF .deps/alloc.Tpo -c alloc.c -o alloc.o >/dev/null 2>&1
  725. mv -f .deps/alloc.Tpo .deps/alloc.Plo
  726. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT extface.lo -MD -MP -MF .deps/extface.Tpo -c -o extface.lo extface.c
  727. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT extface.lo -MD -MP -MF .deps/extface.Tpo -c extface.c -fPIC -DPIC -o .libs/extface.o
  728. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT extface.lo -MD -MP -MF .deps/extface.Tpo -c extface.c -o extface.o >/dev/null 2>&1
  729. mv -f .deps/extface.Tpo .deps/extface.Plo
  730. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo.lo -MD -MP -MF .deps/silo.Tpo -c -o silo.lo silo.c
  731. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo.lo -MD -MP -MF .deps/silo.Tpo -c silo.c -fPIC -DPIC -o .libs/silo.o
  732. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo.lo -MD -MP -MF .deps/silo.Tpo -c silo.c -o silo.o >/dev/null 2>&1
  733. mv -f .deps/silo.Tpo .deps/silo.Plo
  734. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_ns.lo -MD -MP -MF .deps/silo_ns.Tpo -c -o silo_ns.lo silo_ns.c
  735. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_ns.lo -MD -MP -MF .deps/silo_ns.Tpo -c silo_ns.c -fPIC -DPIC -o .libs/silo_ns.o
  736. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_ns.lo -MD -MP -MF .deps/silo_ns.Tpo -c silo_ns.c -o silo_ns.o >/dev/null 2>&1
  737. mv -f .deps/silo_ns.Tpo .deps/silo_ns.Plo
  738. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_f.lo -MD -MP -MF .deps/silo_f.Tpo -c -o silo_f.lo silo_f.c
  739. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_f.lo -MD -MP -MF .deps/silo_f.Tpo -c silo_f.c -fPIC -DPIC -o .libs/silo_f.o
  740. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_f.lo -MD -MP -MF .deps/silo_f.Tpo -c silo_f.c -o silo_f.o >/dev/null 2>&1
  741. mv -f .deps/silo_f.Tpo .deps/silo_f.Plo
  742. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_silo.la alloc.lo extface.lo silo.lo silo_ns.lo silo_f.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  743. libtool: link: ar cru .libs/libsilo_silo.a .libs/alloc.o .libs/extface.o .libs/silo.o .libs/silo_ns.o .libs/silo_f.o
  744. libtool: link: ranlib .libs/libsilo_silo.a
  745. libtool: link: ( cd ".libs" && rm -f "libsilo_silo.la" && ln -s "../libsilo_silo.la" "libsilo_silo.la" )
  746. make[5]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/silo'
  747. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/silo'
  748. Making all in debug
  749. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/debug'
  750. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_debug.lo -MD -MP -MF .deps/silo_debug.Tpo -c -o silo_debug.lo silo_debug.c
  751. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_debug.lo -MD -MP -MF .deps/silo_debug.Tpo -c silo_debug.c -fPIC -DPIC -o .libs/silo_debug.o
  752. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_debug.lo -MD -MP -MF .deps/silo_debug.Tpo -c silo_debug.c -o silo_debug.o >/dev/null 2>&1
  753. mv -f .deps/silo_debug.Tpo .deps/silo_debug.Plo
  754. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_debug.la silo_debug.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  755. libtool: link: ar cru .libs/libsilo_debug.a .libs/silo_debug.o
  756. libtool: link: ranlib .libs/libsilo_debug.a
  757. libtool: link: ( cd ".libs" && rm -f "libsilo_debug.la" && ln -s "../libsilo_debug.la" "libsilo_debug.la" )
  758. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/debug'
  759. Making all in netcdf
  760. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/netcdf'
  761. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT api.lo -MD -MP -MF .deps/api.Tpo -c -o api.lo api.c
  762. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT api.lo -MD -MP -MF .deps/api.Tpo -c api.c -fPIC -DPIC -o .libs/api.o
  763. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT api.lo -MD -MP -MF .deps/api.Tpo -c api.c -o api.o >/dev/null 2>&1
  764. mv -f .deps/api.Tpo .deps/api.Plo
  765. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ent.lo -MD -MP -MF .deps/ent.Tpo -c -o ent.lo ent.c
  766. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ent.lo -MD -MP -MF .deps/ent.Tpo -c ent.c -fPIC -DPIC -o .libs/ent.o
  767. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ent.lo -MD -MP -MF .deps/ent.Tpo -c ent.c -o ent.o >/dev/null 2>&1
  768. mv -f .deps/ent.Tpo .deps/ent.Plo
  769. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT netcdf.lo -MD -MP -MF .deps/netcdf.Tpo -c -o netcdf.lo netcdf.c
  770. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT netcdf.lo -MD -MP -MF .deps/netcdf.Tpo -c netcdf.c -fPIC -DPIC -o .libs/netcdf.o
  771. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT netcdf.lo -MD -MP -MF .deps/netcdf.Tpo -c netcdf.c -o netcdf.o >/dev/null 2>&1
  772. mv -f .deps/netcdf.Tpo .deps/netcdf.Plo
  773. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT obj.lo -MD -MP -MF .deps/obj.Tpo -c -o obj.lo obj.c
  774. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT obj.lo -MD -MP -MF .deps/obj.Tpo -c obj.c -fPIC -DPIC -o .libs/obj.o
  775. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT obj.lo -MD -MP -MF .deps/obj.Tpo -c obj.c -o obj.o >/dev/null 2>&1
  776. mv -f .deps/obj.Tpo .deps/obj.Plo
  777. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_netcdf.lo -MD -MP -MF .deps/silo_netcdf.Tpo -c -o silo_netcdf.lo silo_netcdf.c
  778. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_netcdf.lo -MD -MP -MF .deps/silo_netcdf.Tpo -c silo_netcdf.c -fPIC -DPIC -o .libs/silo_netcdf.o
  779. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_netcdf.lo -MD -MP -MF .deps/silo_netcdf.Tpo -c silo_netcdf.c -o silo_netcdf.o >/dev/null 2>&1
  780. mv -f .deps/silo_netcdf.Tpo .deps/silo_netcdf.Plo
  781. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT table.lo -MD -MP -MF .deps/table.Tpo -c -o table.lo table.c
  782. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT table.lo -MD -MP -MF .deps/table.Tpo -c table.c -fPIC -DPIC -o .libs/table.o
  783. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT table.lo -MD -MP -MF .deps/table.Tpo -c table.c -o table.o >/dev/null 2>&1
  784. mv -f .deps/table.Tpo .deps/table.Plo
  785. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_netcdf.la api.lo ent.lo netcdf.lo obj.lo silo_netcdf.lo table.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  786. libtool: link: ar cru .libs/libsilo_netcdf.a .libs/api.o .libs/ent.o .libs/netcdf.o .libs/obj.o .libs/silo_netcdf.o .libs/table.o
  787. libtool: link: ranlib .libs/libsilo_netcdf.a
  788. libtool: link: ( cd ".libs" && rm -f "libsilo_netcdf.la" && ln -s "../libsilo_netcdf.la" "libsilo_netcdf.la" )
  789. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/netcdf'
  790. Making all in pdb_drv
  791. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb_drv'
  792. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_pdb.lo -MD -MP -MF .deps/silo_pdb.Tpo -c -o silo_pdb.lo silo_pdb.c
  793. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_pdb.lo -MD -MP -MF .deps/silo_pdb.Tpo -c silo_pdb.c -fPIC -DPIC -o .libs/silo_pdb.o
  794. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../pdb -I./../silo -I./../silo -I./../score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_pdb.lo -MD -MP -MF .deps/silo_pdb.Tpo -c silo_pdb.c -o silo_pdb.o >/dev/null 2>&1
  795. mv -f .deps/silo_pdb.Tpo .deps/silo_pdb.Plo
  796. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_pdb_drv.la silo_pdb.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  797. libtool: link: ar cru .libs/libsilo_pdb_drv.a .libs/silo_pdb.o
  798. libtool: link: ranlib .libs/libsilo_pdb_drv.a
  799. libtool: link: ( cd ".libs" && rm -f "libsilo_pdb_drv.la" && ln -s "../libsilo_pdb_drv.la" "libsilo_pdb_drv.la" )
  800. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb_drv'
  801. Making all in hdf5_drv
  802. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/hdf5_drv'
  803. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I./../hzip -I./../fpzip -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_hdf5.lo -MD -MP -MF .deps/silo_hdf5.Tpo -c -o silo_hdf5.lo silo_hdf5.c
  804. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I./../hzip -I./../fpzip -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_hdf5.lo -MD -MP -MF .deps/silo_hdf5.Tpo -c silo_hdf5.c -fPIC -DPIC -o .libs/silo_hdf5.o
  805. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I./../hzip -I./../fpzip -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_hdf5.lo -MD -MP -MF .deps/silo_hdf5.Tpo -c silo_hdf5.c -o silo_hdf5.o >/dev/null 2>&1
  806. mv -f .deps/silo_hdf5.Tpo .deps/silo_hdf5.Plo
  807. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I./../hzip -I./../fpzip -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT H5FDsilo.lo -MD -MP -MF .deps/H5FDsilo.Tpo -c -o H5FDsilo.lo H5FDsilo.c
  808. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I./../hzip -I./../fpzip -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT H5FDsilo.lo -MD -MP -MF .deps/H5FDsilo.Tpo -c H5FDsilo.c -fPIC -DPIC -o .libs/H5FDsilo.o
  809. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I./../hzip -I./../fpzip -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT H5FDsilo.lo -MD -MP -MF .deps/H5FDsilo.Tpo -c H5FDsilo.c -o H5FDsilo.o >/dev/null 2>&1
  810. mv -f .deps/H5FDsilo.Tpo .deps/H5FDsilo.Plo
  811. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_hdf5_drv.la silo_hdf5.lo H5FDsilo.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  812. libtool: link: ar cru .libs/libsilo_hdf5_drv.a .libs/silo_hdf5.o .libs/H5FDsilo.o
  813. libtool: link: ranlib .libs/libsilo_hdf5_drv.a
  814. libtool: link: ( cd ".libs" && rm -f "libsilo_hdf5_drv.la" && ln -s "../libsilo_hdf5_drv.la" "libsilo_hdf5_drv.la" )
  815. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/hdf5_drv'
  816. Making all in taurus
  817. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/taurus'
  818. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_taurus.lo -MD -MP -MF .deps/silo_taurus.Tpo -c -o silo_taurus.lo silo_taurus.c
  819. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_taurus.lo -MD -MP -MF .deps/silo_taurus.Tpo -c silo_taurus.c -fPIC -DPIC -o .libs/silo_taurus.o
  820. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_taurus.lo -MD -MP -MF .deps/silo_taurus.Tpo -c silo_taurus.c -o silo_taurus.o >/dev/null 2>&1
  821. mv -f .deps/silo_taurus.Tpo .deps/silo_taurus.Plo
  822. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT taurus.lo -MD -MP -MF .deps/taurus.Tpo -c -o taurus.lo taurus.c
  823. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT taurus.lo -MD -MP -MF .deps/taurus.Tpo -c taurus.c -fPIC -DPIC -o .libs/taurus.o
  824. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT taurus.lo -MD -MP -MF .deps/taurus.Tpo -c taurus.c -o taurus.o >/dev/null 2>&1
  825. mv -f .deps/taurus.Tpo .deps/taurus.Plo
  826. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_taurus.la silo_taurus.lo taurus.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  827. libtool: link: ar cru .libs/libsilo_taurus.a .libs/silo_taurus.o .libs/taurus.o
  828. libtool: link: ranlib .libs/libsilo_taurus.a
  829. libtool: link: ( cd ".libs" && rm -f "libsilo_taurus.la" && ln -s "../libsilo_taurus.la" "libsilo_taurus.la" )
  830. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/taurus'
  831. Making all in hzip
  832. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/hzip'
  833. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmdecoder.lo -MD -MP -MF .deps/hzmdecoder.Tpo -c -o hzmdecoder.lo hzmdecoder.cpp
  834. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmdecoder.lo -MD -MP -MF .deps/hzmdecoder.Tpo -c hzmdecoder.cpp -fPIC -DPIC -o .libs/hzmdecoder.o
  835. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmdecoder.lo -MD -MP -MF .deps/hzmdecoder.Tpo -c hzmdecoder.cpp -o hzmdecoder.o >/dev/null 2>&1
  836. mv -f .deps/hzmdecoder.Tpo .deps/hzmdecoder.Plo
  837. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmencoder.lo -MD -MP -MF .deps/hzmencoder.Tpo -c -o hzmencoder.lo hzmencoder.cpp
  838. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmencoder.lo -MD -MP -MF .deps/hzmencoder.Tpo -c hzmencoder.cpp -fPIC -DPIC -o .libs/hzmencoder.o
  839. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmencoder.lo -MD -MP -MF .deps/hzmencoder.Tpo -c hzmencoder.cpp -o hzmencoder.o >/dev/null 2>&1
  840. mv -f .deps/hzmencoder.Tpo .deps/hzmencoder.Plo
  841. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmio.lo -MD -MP -MF .deps/hzmio.Tpo -c -o hzmio.lo hzmio.cpp
  842. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmio.lo -MD -MP -MF .deps/hzmio.Tpo -c hzmio.cpp -fPIC -DPIC -o .libs/hzmio.o
  843. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmio.lo -MD -MP -MF .deps/hzmio.Tpo -c hzmio.cpp -o hzmio.o >/dev/null 2>&1
  844. mv -f .deps/hzmio.Tpo .deps/hzmio.Plo
  845. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmpredictor.lo -MD -MP -MF .deps/hzmpredictor.Tpo -c -o hzmpredictor.lo hzmpredictor.cpp
  846. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmpredictor.lo -MD -MP -MF .deps/hzmpredictor.Tpo -c hzmpredictor.cpp -fPIC -DPIC -o .libs/hzmpredictor.o
  847. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmpredictor.lo -MD -MP -MF .deps/hzmpredictor.Tpo -c hzmpredictor.cpp -o hzmpredictor.o >/dev/null 2>&1
  848. mv -f .deps/hzmpredictor.Tpo .deps/hzmpredictor.Plo
  849. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmread.lo -MD -MP -MF .deps/hzmread.Tpo -c -o hzmread.lo hzmread.cpp
  850. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmread.lo -MD -MP -MF .deps/hzmread.Tpo -c hzmread.cpp -fPIC -DPIC -o .libs/hzmread.o
  851. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmread.lo -MD -MP -MF .deps/hzmread.Tpo -c hzmread.cpp -o hzmread.o >/dev/null 2>&1
  852. mv -f .deps/hzmread.Tpo .deps/hzmread.Plo
  853. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmwrite.lo -MD -MP -MF .deps/hzmwrite.Tpo -c -o hzmwrite.lo hzmwrite.cpp
  854. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmwrite.lo -MD -MP -MF .deps/hzmwrite.Tpo -c hzmwrite.cpp -fPIC -DPIC -o .libs/hzmwrite.o
  855. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzmwrite.lo -MD -MP -MF .deps/hzmwrite.Tpo -c hzmwrite.cpp -o hzmwrite.o >/dev/null 2>&1
  856. mv -f .deps/hzmwrite.Tpo .deps/hzmwrite.Plo
  857. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznio.lo -MD -MP -MF .deps/hznio.Tpo -c -o hznio.lo hznio.cpp
  858. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznio.lo -MD -MP -MF .deps/hznio.Tpo -c hznio.cpp -fPIC -DPIC -o .libs/hznio.o
  859. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznio.lo -MD -MP -MF .deps/hznio.Tpo -c hznio.cpp -o hznio.o >/dev/null 2>&1
  860. mv -f .deps/hznio.Tpo .deps/hznio.Plo
  861. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznpredictor.lo -MD -MP -MF .deps/hznpredictor.Tpo -c -o hznpredictor.lo hznpredictor.cpp
  862. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznpredictor.lo -MD -MP -MF .deps/hznpredictor.Tpo -c hznpredictor.cpp -fPIC -DPIC -o .libs/hznpredictor.o
  863. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznpredictor.lo -MD -MP -MF .deps/hznpredictor.Tpo -c hznpredictor.cpp -o hznpredictor.o >/dev/null 2>&1
  864. mv -f .deps/hznpredictor.Tpo .deps/hznpredictor.Plo
  865. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznread.lo -MD -MP -MF .deps/hznread.Tpo -c -o hznread.lo hznread.cpp
  866. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznread.lo -MD -MP -MF .deps/hznread.Tpo -c hznread.cpp -fPIC -DPIC -o .libs/hznread.o
  867. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznread.lo -MD -MP -MF .deps/hznread.Tpo -c hznread.cpp -o hznread.o >/dev/null 2>&1
  868. mv -f .deps/hznread.Tpo .deps/hznread.Plo
  869. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznwrite.lo -MD -MP -MF .deps/hznwrite.Tpo -c -o hznwrite.lo hznwrite.cpp
  870. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznwrite.lo -MD -MP -MF .deps/hznwrite.Tpo -c hznwrite.cpp -fPIC -DPIC -o .libs/hznwrite.o
  871. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hznwrite.lo -MD -MP -MF .deps/hznwrite.Tpo -c hznwrite.cpp -o hznwrite.o >/dev/null 2>&1
  872. mv -f .deps/hznwrite.Tpo .deps/hznwrite.Plo
  873. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzutil.lo -MD -MP -MF .deps/hzutil.Tpo -c -o hzutil.lo hzutil.cpp
  874. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzutil.lo -MD -MP -MF .deps/hzutil.Tpo -c hzutil.cpp -fPIC -DPIC -o .libs/hzutil.o
  875. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT hzutil.lo -MD -MP -MF .deps/hzutil.Tpo -c hzutil.cpp -o hzutil.o >/dev/null 2>&1
  876. mv -f .deps/hzutil.Tpo .deps/hzutil.Plo
  877. /bin/sh ../../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_hzip.la hzmdecoder.lo hzmencoder.lo hzmio.lo hzmpredictor.lo hzmread.lo hzmwrite.lo hznio.lo hznpredictor.lo hznread.lo hznwrite.lo hzutil.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  878. libtool: link: ar cru .libs/libsilo_hzip.a .libs/hzmdecoder.o .libs/hzmencoder.o .libs/hzmio.o .libs/hzmpredictor.o .libs/hzmread.o .libs/hzmwrite.o .libs/hznio.o .libs/hznpredictor.o .libs/hznread.o .libs/hznwrite.o .libs/hzutil.o
  879. libtool: link: ranlib .libs/libsilo_hzip.a
  880. libtool: link: ( cd ".libs" && rm -f "libsilo_hzip.la" && ln -s "../libsilo_hzip.la" "libsilo_hzip.la" )
  881. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/hzip'
  882. Making all in fpzip
  883. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/fpzip'
  884. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT error.lo -MD -MP -MF .deps/error.Tpo -c -o error.lo error.cpp
  885. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT error.lo -MD -MP -MF .deps/error.Tpo -c error.cpp -fPIC -DPIC -o .libs/error.o
  886. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT error.lo -MD -MP -MF .deps/error.Tpo -c error.cpp -o error.o >/dev/null 2>&1
  887. mv -f .deps/error.Tpo .deps/error.Plo
  888. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcdecoder.lo -MD -MP -MF .deps/rcdecoder.Tpo -c -o rcdecoder.lo rcdecoder.cpp
  889. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcdecoder.lo -MD -MP -MF .deps/rcdecoder.Tpo -c rcdecoder.cpp -fPIC -DPIC -o .libs/rcdecoder.o
  890. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcdecoder.lo -MD -MP -MF .deps/rcdecoder.Tpo -c rcdecoder.cpp -o rcdecoder.o >/dev/null 2>&1
  891. mv -f .deps/rcdecoder.Tpo .deps/rcdecoder.Plo
  892. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcencoder.lo -MD -MP -MF .deps/rcencoder.Tpo -c -o rcencoder.lo rcencoder.cpp
  893. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcencoder.lo -MD -MP -MF .deps/rcencoder.Tpo -c rcencoder.cpp -fPIC -DPIC -o .libs/rcencoder.o
  894. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcencoder.lo -MD -MP -MF .deps/rcencoder.Tpo -c rcencoder.cpp -o rcencoder.o >/dev/null 2>&1
  895. mv -f .deps/rcencoder.Tpo .deps/rcencoder.Plo
  896. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcqsmodel.lo -MD -MP -MF .deps/rcqsmodel.Tpo -c -o rcqsmodel.lo rcqsmodel.cpp
  897. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcqsmodel.lo -MD -MP -MF .deps/rcqsmodel.Tpo -c rcqsmodel.cpp -fPIC -DPIC -o .libs/rcqsmodel.o
  898. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rcqsmodel.lo -MD -MP -MF .deps/rcqsmodel.Tpo -c rcqsmodel.cpp -o rcqsmodel.o >/dev/null 2>&1
  899. mv -f .deps/rcqsmodel.Tpo .deps/rcqsmodel.Plo
  900. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT read.lo -MD -MP -MF .deps/read.Tpo -c -o read.lo read.cpp
  901. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT read.lo -MD -MP -MF .deps/read.Tpo -c read.cpp -fPIC -DPIC -o .libs/read.o
  902. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT read.lo -MD -MP -MF .deps/read.Tpo -c read.cpp -o read.o >/dev/null 2>&1
  903. mv -f .deps/read.Tpo .deps/read.Plo
  904. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT write.lo -MD -MP -MF .deps/write.Tpo -c -o write.lo write.cpp
  905. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT write.lo -MD -MP -MF .deps/write.Tpo -c write.cpp -fPIC -DPIC -o .libs/write.o
  906. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -DFPZIP_BLOCK_SIZE=0x1000 -DFPZIP_FP=FPZIP_FP_SAFE -DFPZIP_VERBOSE=0 -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT write.lo -MD -MP -MF .deps/write.Tpo -c write.cpp -o write.o >/dev/null 2>&1
  907. mv -f .deps/write.Tpo .deps/write.Plo
  908. /bin/sh ../../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_fpzip.la error.lo rcdecoder.lo rcencoder.lo rcqsmodel.lo read.lo write.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  909. libtool: link: ar cru .libs/libsilo_fpzip.a .libs/error.o .libs/rcdecoder.o .libs/rcencoder.o .libs/rcqsmodel.o .libs/read.o .libs/write.o
  910. libtool: link: ranlib .libs/libsilo_fpzip.a
  911. libtool: link: ( cd ".libs" && rm -f "libsilo_fpzip.la" && ln -s "../libsilo_fpzip.la" "libsilo_fpzip.la" )
  912. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/fpzip'
  913. Making all in unknown
  914. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/unknown'
  915. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_unknown.lo -MD -MP -MF .deps/silo_unknown.Tpo -c -o silo_unknown.lo silo_unknown.c
  916. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_unknown.lo -MD -MP -MF .deps/silo_unknown.Tpo -c silo_unknown.c -fPIC -DPIC -o .libs/silo_unknown.o
  917. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silo_unknown.lo -MD -MP -MF .deps/silo_unknown.Tpo -c silo_unknown.c -o silo_unknown.o >/dev/null 2>&1
  918. mv -f .deps/silo_unknown.Tpo .deps/silo_unknown.Plo
  919. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_unknown.la silo_unknown.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  920. libtool: link: ar cru .libs/libsilo_unknown.a .libs/silo_unknown.o
  921. libtool: link: ranlib .libs/libsilo_unknown.a
  922. libtool: link: ( cd ".libs" && rm -f "libsilo_unknown.la" && ln -s "../libsilo_unknown.la" "libsilo_unknown.la" )
  923. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/unknown'
  924. Making all in filters
  925. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/filters'
  926. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT f_ale3d.lo -MD -MP -MF .deps/f_ale3d.Tpo -c -o f_ale3d.lo f_ale3d.c
  927. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT f_ale3d.lo -MD -MP -MF .deps/f_ale3d.Tpo -c f_ale3d.c -fPIC -DPIC -o .libs/f_ale3d.o
  928. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT f_ale3d.lo -MD -MP -MF .deps/f_ale3d.Tpo -c f_ale3d.c -o f_ale3d.o >/dev/null 2>&1
  929. mv -f .deps/f_ale3d.Tpo .deps/f_ale3d.Plo
  930. /bin/sh ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT f_sample.lo -MD -MP -MF .deps/f_sample.Tpo -c -o f_sample.lo f_sample.c
  931. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT f_sample.lo -MD -MP -MF .deps/f_sample.Tpo -c f_sample.c -fPIC -DPIC -o .libs/f_sample.o
  932. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I./../silo -I./../silo -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT f_sample.lo -MD -MP -MF .deps/f_sample.Tpo -c f_sample.c -o f_sample.o >/dev/null 2>&1
  933. mv -f .deps/f_sample.Tpo .deps/f_sample.Plo
  934. /bin/sh ../../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsilo_filters.la f_ale3d.lo f_sample.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  935. libtool: link: ar cru .libs/libsilo_filters.a .libs/f_ale3d.o .libs/f_sample.o
  936. libtool: link: ranlib .libs/libsilo_filters.a
  937. libtool: link: ( cd ".libs" && rm -f "libsilo_filters.la" && ln -s "../libsilo_filters.la" "libsilo_filters.la" )
  938. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/filters'
  939. Making all in .
  940. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src'
  941. /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT siloh5_version.lo -MD -MP -MF .deps/siloh5_version.Tpo -c -o siloh5_version.lo siloh5_version.c
  942. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT siloh5_version.lo -MD -MP -MF .deps/siloh5_version.Tpo -c siloh5_version.c -fPIC -DPIC -o .libs/siloh5_version.o
  943. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT siloh5_version.lo -MD -MP -MF .deps/siloh5_version.Tpo -c siloh5_version.c -o siloh5_version.o >/dev/null 2>&1
  944. mv -f .deps/siloh5_version.Tpo .deps/siloh5_version.Plo
  945. /bin/sh ../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -avoid-version -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o libsiloh5.la -rpath /usr/lib siloh5_version.lo score/libsilo_score.la pdb/libsilo_pdb.la silo/libsilo_silo.la debug/libsilo_debug.la netcdf/libsilo_netcdf.la pdb_drv/libsilo_pdb_drv.la hdf5_drv/libsilo_hdf5_drv.la taurus/libsilo_taurus.la hzip/libsilo_hzip.la fpzip/libsilo_fpzip.la unknown/libsilo_unknown.la filters/libsilo_filters.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  946. libtool: link: gcc -shared .libs/siloh5_version.o -Wl,--whole-archive score/.libs/libsilo_score.a pdb/.libs/libsilo_pdb.a silo/.libs/libsilo_silo.a debug/.libs/libsilo_debug.a netcdf/.libs/libsilo_netcdf.a pdb_drv/.libs/libsilo_pdb_drv.a hdf5_drv/.libs/libsilo_hdf5_drv.a taurus/.libs/libsilo_taurus.a hzip/.libs/libsilo_hzip.a fpzip/.libs/libsilo_fpzip.a unknown/.libs/libsilo_unknown.a filters/.libs/libsilo_filters.a -Wl,--no-whole-archive -L/usr/lib -L/usr/lib/lib -lhdf5 -lz -lm -lsz -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,libsiloh5.so -o .libs/libsiloh5.so
  947. libtool: link: (cd .libs/libsiloh5.lax/libsilo_score.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/score/.libs/libsilo_score.a")
  948. libtool: link: (cd .libs/libsiloh5.lax/libsilo_pdb.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb/.libs/libsilo_pdb.a")
  949. libtool: link: (cd .libs/libsiloh5.lax/libsilo_silo.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/silo/.libs/libsilo_silo.a")
  950. libtool: link: (cd .libs/libsiloh5.lax/libsilo_debug.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/debug/.libs/libsilo_debug.a")
  951. libtool: link: (cd .libs/libsiloh5.lax/libsilo_netcdf.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/netcdf/.libs/libsilo_netcdf.a")
  952. libtool: link: (cd .libs/libsiloh5.lax/libsilo_pdb_drv.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/pdb_drv/.libs/libsilo_pdb_drv.a")
  953. libtool: link: (cd .libs/libsiloh5.lax/libsilo_hdf5_drv.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/hdf5_drv/.libs/libsilo_hdf5_drv.a")
  954. libtool: link: (cd .libs/libsiloh5.lax/libsilo_taurus.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/taurus/.libs/libsilo_taurus.a")
  955. libtool: link: (cd .libs/libsiloh5.lax/libsilo_hzip.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/hzip/.libs/libsilo_hzip.a")
  956. libtool: link: (cd .libs/libsiloh5.lax/libsilo_fpzip.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/fpzip/.libs/libsilo_fpzip.a")
  957. libtool: link: (cd .libs/libsiloh5.lax/libsilo_unknown.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/unknown/.libs/libsilo_unknown.a")
  958. libtool: link: (cd .libs/libsiloh5.lax/libsilo_filters.a && ar x "/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/filters/.libs/libsilo_filters.a")
  959. libtool: link: ar cru .libs/libsiloh5.a siloh5_version.o .libs/libsiloh5.lax/libsilo_score.a/scstr.o .libs/libsiloh5.lax/libsilo_score.a/schash.o .libs/libsiloh5.lax/libsilo_score.a/scctl.o .libs/libsiloh5.lax/libsilo_score.a/scctla.o .libs/libsiloh5.lax/libsilo_score.a/memmove.o .libs/libsiloh5.lax/libsilo_pdb.a/pdrdwr.o .libs/libsiloh5.lax/libsilo_pdb.a/pdpath.o .libs/libsiloh5.lax/libsilo_pdb.a/pdmemb.o .libs/libsiloh5.lax/libsilo_pdb.a/pdlow.o .libs/libsiloh5.lax/libsilo_pdb.a/pdconv.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbx.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbmm.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbio.o .libs/libsiloh5.lax/libsilo_pdb.a/pdbdir.o .libs/libsiloh5.lax/libsilo_pdb.a/pdb.o .libs/libsiloh5.lax/libsilo_silo.a/silo_f.o .libs/libsiloh5.lax/libsilo_silo.a/silo_ns.o .libs/libsiloh5.lax/libsilo_silo.a/silo.o .libs/libsiloh5.lax/libsilo_silo.a/extface.o .libs/libsiloh5.lax/libsilo_silo.a/alloc.o .libs/libsiloh5.lax/libsilo_debug.a/silo_debug.o .libs/libsiloh5.lax/libsilo_netcdf.a/table.o .libs/libsiloh5.lax/libsilo_netcdf.a/silo_netcdf.o .libs/libsiloh5.lax/libsilo_netcdf.a/obj.o .libs/libsiloh5.lax/libsilo_netcdf.a/netcdf.o .libs/libsiloh5.lax/libsilo_netcdf.a/ent.o .libs/libsiloh5.lax/libsilo_netcdf.a/api.o .libs/libsiloh5.lax/libsilo_pdb_drv.a/silo_pdb.o .libs/libsiloh5.lax/libsilo_hdf5_drv.a/H5FDsilo.o .libs/libsiloh5.lax/libsilo_hdf5_drv.a/silo_hdf5.o .libs/libsiloh5.lax/libsilo_taurus.a/taurus.o .libs/libsiloh5.lax/libsilo_taurus.a/silo_taurus.o .libs/libsiloh5.lax/libsilo_hzip.a/hzutil.o .libs/libsiloh5.lax/libsilo_hzip.a/hznwrite.o .libs/libsiloh5.lax/libsilo_hzip.a/hznread.o .libs/libsiloh5.lax/libsilo_hzip.a/hznpredictor.o .libs/libsiloh5.lax/libsilo_hzip.a/hznio.o .libs/libsiloh5.lax/libsilo_hzip.a/hzmwrite.o .libs/libsiloh5.lax/libsilo_hzip.a/hzmread.o .libs/libsiloh5.lax/libsilo_hzip.a/hzmpredictor.o .libs/libsiloh5.lax/libsilo_hzip.a/hzmio.o .libs/libsiloh5.lax/libsilo_hzip.a/hzmencoder.o .libs/libsiloh5.lax/libsilo_hzip.a/hzmdecoder.o .libs/libsiloh5.lax/libsilo_fpzip.a/write.o .libs/libsiloh5.lax/libsilo_fpzip.a/read.o .libs/libsiloh5.lax/libsilo_fpzip.a/rcqsmodel.o .libs/libsiloh5.lax/libsilo_fpzip.a/rcencoder.o .libs/libsiloh5.lax/libsilo_fpzip.a/rcdecoder.o .libs/libsiloh5.lax/libsilo_fpzip.a/error.o .libs/libsiloh5.lax/libsilo_unknown.a/silo_unknown.o .libs/libsiloh5.lax/libsilo_filters.a/f_sample.o .libs/libsiloh5.lax/libsilo_filters.a/f_ale3d.o
  960. libtool: link: ranlib .libs/libsiloh5.a
  961. libtool: link: rm -fr .libs/libsiloh5.lax
  962. libtool: link: ( cd ".libs" && rm -f "libsiloh5.la" && ln -s "../libsiloh5.la" "libsiloh5.la" )
  963. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src'
  964. make[3]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src'
  965. make[2]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src'
  966. Making all in tools
  967. make[2]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools'
  968. Making all in .
  969. make[3]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools'
  970. make[3]: Nothing to be done for 'all-am'.
  971. make[3]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools'
  972. Making all in silock
  973. make[3]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/silock'
  974. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT silock.o -MD -MP -MF .deps/silock.Tpo -c -o silock.o silock.c
  975. mv -f .deps/silock.Tpo .deps/silock.Po
  976. /bin/sh ../../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o silock silock.o ../../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  977. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/silock silock.o -L/usr/lib -L/usr/lib/lib ../../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  978. make[3]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/silock'
  979. Making all in browser
  980. make[3]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/browser'
  981. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT array.o -MD -MP -MF .deps/array.Tpo -c -o array.o array.c
  982. mv -f .deps/array.Tpo .deps/array.Po
  983. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT bif.o -MD -MP -MF .deps/bif.Tpo -c -o bif.o bif.c
  984. mv -f .deps/bif.Tpo .deps/bif.Po
  985. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT browser.o -MD -MP -MF .deps/browser.Tpo -c -o browser.o browser.c
  986. mv -f .deps/browser.Tpo .deps/browser.Po
  987. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT cons.o -MD -MP -MF .deps/cons.Tpo -c -o cons.o cons.c
  988. mv -f .deps/cons.Tpo .deps/cons.Po
  989. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT file.o -MD -MP -MF .deps/file.Tpo -c -o file.o file.c
  990. mv -f .deps/file.Tpo .deps/file.Po
  991. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT func.o -MD -MP -MF .deps/func.Tpo -c -o func.o func.c
  992. mv -f .deps/func.Tpo .deps/func.Po
  993. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT lex.o -MD -MP -MF .deps/lex.Tpo -c -o lex.o lex.c
  994. mv -f .deps/lex.Tpo .deps/lex.Po
  995. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT num.o -MD -MP -MF .deps/num.Tpo -c -o num.o num.c
  996. mv -f .deps/num.Tpo .deps/num.Po
  997. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT obj.o -MD -MP -MF .deps/obj.Tpo -c -o obj.o obj.c
  998. mv -f .deps/obj.Tpo .deps/obj.Po
  999. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT output.o -MD -MP -MF .deps/output.Tpo -c -o output.o output.c
  1000. mv -f .deps/output.Tpo .deps/output.Po
  1001. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT parse.o -MD -MP -MF .deps/parse.Tpo -c -o parse.o parse.c
  1002. mv -f .deps/parse.Tpo .deps/parse.Po
  1003. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT prim.o -MD -MP -MF .deps/prim.Tpo -c -o prim.o prim.c
  1004. mv -f .deps/prim.Tpo .deps/prim.Po
  1005. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ptr.o -MD -MP -MF .deps/ptr.Tpo -c -o ptr.o ptr.c
  1006. mv -f .deps/ptr.Tpo .deps/ptr.Po
  1007. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT range.o -MD -MP -MF .deps/range.Tpo -c -o range.o range.c
  1008. mv -f .deps/range.Tpo .deps/range.Po
  1009. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT sdo.o -MD -MP -MF .deps/sdo.Tpo -c -o sdo.o sdo.c
  1010. mv -f .deps/sdo.Tpo .deps/sdo.Po
  1011. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT stc.o -MD -MP -MF .deps/stc.Tpo -c -o stc.o stc.c
  1012. mv -f .deps/stc.Tpo .deps/stc.Po
  1013. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT str.o -MD -MP -MF .deps/str.Tpo -c -o str.o str.c
  1014. mv -f .deps/str.Tpo .deps/str.Po
  1015. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT switch.o -MD -MP -MF .deps/switch.Tpo -c -o switch.o switch.c
  1016. mv -f .deps/switch.Tpo .deps/switch.Po
  1017. gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I../../src/filters -I/usr/include -DPUBLIC_INIT_FILE=\"/usr/include/browser_rc\" -I../../src/filters -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT sym.o -MD -MP -MF .deps/sym.Tpo -c -o sym.o sym.c
  1018. mv -f .deps/sym.Tpo .deps/sym.Po
  1019. /bin/sh ../../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o browser array.o bif.o browser.o cons.o file.o func.o lex.o num.o obj.o output.o parse.o prim.o ptr.o range.o sdo.o stc.o str.o switch.o sym.o ../../src/libsiloh5.la -lreadline -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1020. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/browser array.o bif.o browser.o cons.o file.o func.o lex.o num.o obj.o output.o parse.o prim.o ptr.o range.o sdo.o stc.o str.o switch.o sym.o -L/usr/lib -L/usr/lib/lib ../../src/.libs/libsiloh5.so -lreadline -lhdf5 -lz -lm -lsz
  1021. make[3]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/browser'
  1022. Making all in python
  1023. make[3]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/python'
  1024. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pydbfile.lo -MD -MP -MF .deps/pydbfile.Tpo -c -o pydbfile.lo pydbfile.cpp
  1025. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pydbfile.lo -MD -MP -MF .deps/pydbfile.Tpo -c pydbfile.cpp -fPIC -DPIC -o .libs/pydbfile.o
  1026. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pydbfile.lo -MD -MP -MF .deps/pydbfile.Tpo -c pydbfile.cpp -o pydbfile.o >/dev/null 2>&1
  1027. mv -f .deps/pydbfile.Tpo .deps/pydbfile.Plo
  1028. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pydbtoc.lo -MD -MP -MF .deps/pydbtoc.Tpo -c -o pydbtoc.lo pydbtoc.cpp
  1029. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pydbtoc.lo -MD -MP -MF .deps/pydbtoc.Tpo -c pydbtoc.cpp -fPIC -DPIC -o .libs/pydbtoc.o
  1030. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pydbtoc.lo -MD -MP -MF .deps/pydbtoc.Tpo -c pydbtoc.cpp -o pydbtoc.o >/dev/null 2>&1
  1031. mv -f .deps/pydbtoc.Tpo .deps/pydbtoc.Plo
  1032. /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pysilo.lo -MD -MP -MF .deps/pysilo.Tpo -c -o pysilo.lo pysilo.cpp
  1033. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pysilo.lo -MD -MP -MF .deps/pysilo.Tpo -c pysilo.cpp -fPIC -DPIC -o .libs/pysilo.o
  1034. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python2.7 -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT pysilo.lo -MD -MP -MF .deps/pysilo.Tpo -c pysilo.cpp -o pysilo.o >/dev/null 2>&1
  1035. mv -f .deps/pysilo.Tpo .deps/pysilo.Plo
  1036. /bin/sh ../../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -module -avoid-version -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o Silo.la -rpath /usr/lib pydbfile.lo pydbtoc.lo pysilo.lo ../../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1037. libtool: link: g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/crtbeginS.o .libs/pydbfile.o .libs/pydbtoc.o .libs/pysilo.o -Wl,-rpath -Wl,/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/.libs -L/usr/lib -L/usr/lib/lib ../../src/.libs/libsiloh5.so -lhdf5 -lz -lsz -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1 -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib/crtn.o -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,Silo.so -o .libs/Silo.so
  1038. libtool: link: ar cru .libs/Silo.a pydbfile.o pydbtoc.o pysilo.o
  1039. libtool: link: ranlib .libs/Silo.a
  1040. libtool: link: ( cd ".libs" && rm -f "Silo.la" && ln -s "../Silo.la" "Silo.la" )
  1041. make[3]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/python'
  1042. Making all in silex
  1043. make[3]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/silex'
  1044. /usr/lib/qt4/bin/moc -o Explorer_moc.cpp Explorer.h
  1045. /usr/lib/qt4/bin/moc -o SiloView_moc.cpp SiloView.h
  1046. /usr/lib/qt4/bin/moc -o SiloDirView_moc.cpp SiloDirView.h
  1047. /usr/lib/qt4/bin/moc -o SiloDirTreeView_moc.cpp SiloDirTreeView.h
  1048. /usr/lib/qt4/bin/moc -o SiloArrayView_moc.cpp SiloArrayView.h
  1049. /usr/lib/qt4/bin/moc -o SiloValueView_moc.cpp SiloValueView.h
  1050. /usr/lib/qt4/bin/moc -o SiloObjectView_moc.cpp SiloObjectView.h
  1051. make all-am
  1052. make[4]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/silex'
  1053. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT Explorer.o -MD -MP -MF .deps/Explorer.Tpo -c -o Explorer.o Explorer.cpp
  1054. mv -f .deps/Explorer.Tpo .deps/Explorer.Po
  1055. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloView.o -MD -MP -MF .deps/SiloView.Tpo -c -o SiloView.o SiloView.cpp
  1056. mv -f .deps/SiloView.Tpo .deps/SiloView.Po
  1057. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloDirView.o -MD -MP -MF .deps/SiloDirView.Tpo -c -o SiloDirView.o SiloDirView.cpp
  1058. mv -f .deps/SiloDirView.Tpo .deps/SiloDirView.Po
  1059. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloDirTreeView.o -MD -MP -MF .deps/SiloDirTreeView.Tpo -c -o SiloDirTreeView.o SiloDirTreeView.cpp
  1060. mv -f .deps/SiloDirTreeView.Tpo .deps/SiloDirTreeView.Po
  1061. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloArrayView.o -MD -MP -MF .deps/SiloArrayView.Tpo -c -o SiloArrayView.o SiloArrayView.cpp
  1062. mv -f .deps/SiloArrayView.Tpo .deps/SiloArrayView.Po
  1063. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloValueView.o -MD -MP -MF .deps/SiloValueView.Tpo -c -o SiloValueView.o SiloValueView.cpp
  1064. mv -f .deps/SiloValueView.Tpo .deps/SiloValueView.Po
  1065. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloObjectView.o -MD -MP -MF .deps/SiloObjectView.Tpo -c -o SiloObjectView.o SiloObjectView.cpp
  1066. mv -f .deps/SiloObjectView.Tpo .deps/SiloObjectView.Po
  1067. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloFile.o -MD -MP -MF .deps/SiloFile.Tpo -c -o SiloFile.o SiloFile.cpp
  1068. mv -f .deps/SiloFile.Tpo .deps/SiloFile.Po
  1069. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.cpp
  1070. mv -f .deps/main.Tpo .deps/main.Po
  1071. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT Explorer_moc.o -MD -MP -MF .deps/Explorer_moc.Tpo -c -o Explorer_moc.o Explorer_moc.cpp
  1072. mv -f .deps/Explorer_moc.Tpo .deps/Explorer_moc.Po
  1073. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloView_moc.o -MD -MP -MF .deps/SiloView_moc.Tpo -c -o SiloView_moc.o SiloView_moc.cpp
  1074. mv -f .deps/SiloView_moc.Tpo .deps/SiloView_moc.Po
  1075. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloDirView_moc.o -MD -MP -MF .deps/SiloDirView_moc.Tpo -c -o SiloDirView_moc.o SiloDirView_moc.cpp
  1076. mv -f .deps/SiloDirView_moc.Tpo .deps/SiloDirView_moc.Po
  1077. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloDirTreeView_moc.o -MD -MP -MF .deps/SiloDirTreeView_moc.Tpo -c -o SiloDirTreeView_moc.o SiloDirTreeView_moc.cpp
  1078. mv -f .deps/SiloDirTreeView_moc.Tpo .deps/SiloDirTreeView_moc.Po
  1079. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloArrayView_moc.o -MD -MP -MF .deps/SiloArrayView_moc.Tpo -c -o SiloArrayView_moc.o SiloArrayView_moc.cpp
  1080. mv -f .deps/SiloArrayView_moc.Tpo .deps/SiloArrayView_moc.Po
  1081. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloValueView_moc.o -MD -MP -MF .deps/SiloValueView_moc.Tpo -c -o SiloValueView_moc.o SiloValueView_moc.cpp
  1082. mv -f .deps/SiloValueView_moc.Tpo .deps/SiloValueView_moc.Po
  1083. g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/silo -I../../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT SiloObjectView_moc.o -MD -MP -MF .deps/SiloObjectView_moc.Tpo -c -o SiloObjectView_moc.o SiloObjectView_moc.cpp
  1084. mv -f .deps/SiloObjectView_moc.Tpo .deps/SiloObjectView_moc.Po
  1085. /bin/sh ../../libtool --tag=CXX --mode=link g++ -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o silex Explorer.o SiloView.o SiloDirView.o SiloDirTreeView.o SiloArrayView.o SiloValueView.o SiloObjectView.o SiloFile.o main.o Explorer_moc.o SiloView_moc.o SiloDirView_moc.o SiloDirTreeView_moc.o SiloArrayView_moc.o SiloValueView_moc.o SiloObjectView_moc.o ../../src/libsiloh5.la -L/usr/lib -l{QtCore,QtGui} -lSM -lICE -lX11 -lXext -lXmu -lXt -lXi -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1086. libtool: link: g++ -I/usr/include/qt4 -I/usr/include/qt4/Qt -I/usr/include/qt4/QtCore -I/usr/include/qt4/QtGui -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/silex Explorer.o SiloView.o SiloDirView.o SiloDirTreeView.o SiloArrayView.o SiloValueView.o SiloObjectView.o SiloFile.o main.o Explorer_moc.o SiloView_moc.o SiloDirView_moc.o SiloDirTreeView_moc.o SiloArrayView_moc.o SiloValueView_moc.o SiloObjectView_moc.o -L/usr/lib -L/usr/lib/lib ../../src/.libs/libsiloh5.so -lQtCore -lQtGui -lSM -lICE -lX11 -lXext -lXmu -lXt -lXi -lhdf5 -lz -lm -lsz
  1087. make[4]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/silex'
  1088. make[3]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools/silex'
  1089. make[2]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tools'
  1090. Making all in tests
  1091. make[2]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tests'
  1092.  
  1093. NOTICE: Silo test cases are not compiled by default. To compile and test
  1094. NOTICE: them run "make check" from the silo "tests" directory. Otherwise
  1095. NOTICE: you can compile them individually with "make TESTNAME". The test
  1096. NOTICE: names are: array, dir, extface, multi_test, partial_io, point,
  1097. NOTICE: quad, simple, ucd, ucdsamp3, testall, obj, onehex, oneprism,
  1098. NOTICE: onepyramid, onetet, subhex, TestReadMask, twohex, multispec, sami,
  1099. NOTICE: specmix, spec, cpz1plt, group_test, listtypes, alltypes, wave,
  1100. NOTICE: multi_file, polyzl, csg, rocket, mmadjacency, largefile, version,
  1101. NOTICE: namescheme, efcentering, mk_nasf_pdb, ioperf, arbpoly2d, readstuff,
  1102. NOTICE: mat3d_3across, merge_block, empty, majorder, realloc_obj_and_opts,
  1103. NOTICE: testpdb, pdbtst, compression, grab, mk_nasf_h5, arrayf77, arrayf90,
  1104. NOTICE: curvef77, matf77, pointf77, quadf77, ucdf77, testallf77, csgmesh,
  1105. NOTICE: but "testall" is a good one to start with.
  1106.  
  1107. make[2]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tests'
  1108. make[1]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2'
  1109.  
  1110. NOTICE: Silo test cases are not compiled by default. To compile and test
  1111. NOTICE: them run "make check" from the silo "tests" directory. Otherwise
  1112. NOTICE: you can compile them individually with "make TESTNAME". The test
  1113. NOTICE: names are: array, dir, extface, multi_test, partial_io, point,
  1114. NOTICE: quad, simple, ucd, ucdsamp3, testall, obj, onehex, oneprism,
  1115. NOTICE: onepyramid, onetet, subhex, TestReadMask, twohex, multispec, sami,
  1116. NOTICE: specmix, spec, cpz1plt, group_test, listtypes, alltypes, wave,
  1117. NOTICE: multi_file, polyzl, csg, rocket, mmadjacency, largefile, version,
  1118. NOTICE: namescheme, efcentering, mk_nasf_pdb, ioperf, arbpoly2d, readstuff,
  1119. NOTICE: mat3d_3across, merge_block, empty, majorder, realloc_obj_and_opts,
  1120. NOTICE: testpdb, pdbtst, compression, grab, mk_nasf_h5, arrayf77, arrayf90,
  1121. NOTICE: curvef77, matf77, pointf77, quadf77, ucdf77, testallf77, csgmesh,
  1122. NOTICE: but "testall" is a good one to start with.
  1123.  
  1124. make rocket_silo.la ioperf_silo.la ioperf_pdb.la ioperf_sec2.la ioperf_stdio.la ioperf_hdf5.la arbpoly arbpoly2d array extface multi_test partial_io point group_test listtypes simple ucd ucdsamp3 testall alltypes obj onehex oneprism onepyramid onetet TestReadMask subhex twohex multispec specmix sami spec cpz1plt merge_block mat3d_3across ucd1d wave multi_file polyzl csg rocket mmadjacency largefile dir quad version namescheme efcentering mk_nasf_pdb ioperf readstuff testfs empty majorder realloc_obj_and_opts testpdb pdbtst compression grab mk_nasf_h5 arrayf77 arrayf90 curvef77 matf77 pointf77 quadf77 ucdf77 testallf77 csgmesh \
  1125. checksums testhzip testxvers test_error.py test_read.py test_write.py testonehex testsilock testdtypes xvers_data.tar.bz2 pion0244.silo
  1126. make[1]: Entering directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tests'
  1127. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rocket_silo.lo -MD -MP -MF .deps/rocket_silo.Tpo -c -o rocket_silo.lo rocket_silo.cxx
  1128. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rocket_silo.lo -MD -MP -MF .deps/rocket_silo.Tpo -c rocket_silo.cxx -fPIC -DPIC -o .libs/rocket_silo.o
  1129. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rocket_silo.lo -MD -MP -MF .deps/rocket_silo.Tpo -c rocket_silo.cxx -o rocket_silo.o >/dev/null 2>&1
  1130. mv -f .deps/rocket_silo.Tpo .deps/rocket_silo.Plo
  1131. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -module -avoid-version -rpath /nowhere -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o rocket_silo.la rocket_silo.lo ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1132. libtool: link: g++ -shared -nostdlib /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib/crti.o /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/crtbeginS.o .libs/rocket_silo.o -Wl,-rpath -Wl,/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/src/.libs -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lsz -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1 -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/crtendS.o /usr/lib/gcc/x86_64-pc-linux-gnu/6.1.1/../../../../lib/crtn.o -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,rocket_silo.so -o .libs/rocket_silo.so
  1133. libtool: link: ar cru .libs/rocket_silo.a rocket_silo.o
  1134. libtool: link: ranlib .libs/rocket_silo.a
  1135. libtool: link: ( cd ".libs" && rm -f "rocket_silo.la" && ln -s "../rocket_silo.la" "rocket_silo.la" )
  1136. /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_silo.lo -MD -MP -MF .deps/ioperf_silo.Tpo -c -o ioperf_silo.lo ioperf_silo.c
  1137. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_silo.lo -MD -MP -MF .deps/ioperf_silo.Tpo -c ioperf_silo.c -fPIC -DPIC -o .libs/ioperf_silo.o
  1138. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_silo.lo -MD -MP -MF .deps/ioperf_silo.Tpo -c ioperf_silo.c -o ioperf_silo.o >/dev/null 2>&1
  1139. mv -f .deps/ioperf_silo.Tpo .deps/ioperf_silo.Plo
  1140. /bin/sh ../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -module -avoid-version -rpath /nowhere -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ioperf_silo.la ioperf_silo.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1141. libtool: link: gcc -shared .libs/ioperf_silo.o -L/usr/lib -L/usr/lib/lib -lhdf5 -lz -lm -lsz -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,ioperf_silo.so -o .libs/ioperf_silo.so
  1142. libtool: link: ar cru .libs/ioperf_silo.a ioperf_silo.o
  1143. libtool: link: ranlib .libs/ioperf_silo.a
  1144. libtool: link: ( cd ".libs" && rm -f "ioperf_silo.la" && ln -s "../ioperf_silo.la" "ioperf_silo.la" )
  1145. /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I../src/pdb -I../src/score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_pdb_la-ioperf_pdb.lo -MD -MP -MF .deps/ioperf_pdb_la-ioperf_pdb.Tpo -c -o ioperf_pdb_la-ioperf_pdb.lo `test -f 'ioperf_pdb.c' || echo './'`ioperf_pdb.c
  1146. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I../src/pdb -I../src/score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_pdb_la-ioperf_pdb.lo -MD -MP -MF .deps/ioperf_pdb_la-ioperf_pdb.Tpo -c ioperf_pdb.c -fPIC -DPIC -o .libs/ioperf_pdb_la-ioperf_pdb.o
  1147. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I../src/pdb -I../src/score -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_pdb_la-ioperf_pdb.lo -MD -MP -MF .deps/ioperf_pdb_la-ioperf_pdb.Tpo -c ioperf_pdb.c -o ioperf_pdb_la-ioperf_pdb.o >/dev/null 2>&1
  1148. mv -f .deps/ioperf_pdb_la-ioperf_pdb.Tpo .deps/ioperf_pdb_la-ioperf_pdb.Plo
  1149. /bin/sh ../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -module -avoid-version -rpath /nowhere -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ioperf_pdb.la ioperf_pdb_la-ioperf_pdb.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1150. libtool: link: gcc -shared .libs/ioperf_pdb_la-ioperf_pdb.o -L/usr/lib -L/usr/lib/lib -lhdf5 -lz -lm -lsz -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,ioperf_pdb.so -o .libs/ioperf_pdb.so
  1151. libtool: link: ar cru .libs/ioperf_pdb.a ioperf_pdb_la-ioperf_pdb.o
  1152. libtool: link: ranlib .libs/ioperf_pdb.a
  1153. libtool: link: ( cd ".libs" && rm -f "ioperf_pdb.la" && ln -s "../ioperf_pdb.la" "ioperf_pdb.la" )
  1154. /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_sec2.lo -MD -MP -MF .deps/ioperf_sec2.Tpo -c -o ioperf_sec2.lo ioperf_sec2.c
  1155. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_sec2.lo -MD -MP -MF .deps/ioperf_sec2.Tpo -c ioperf_sec2.c -fPIC -DPIC -o .libs/ioperf_sec2.o
  1156. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_sec2.lo -MD -MP -MF .deps/ioperf_sec2.Tpo -c ioperf_sec2.c -o ioperf_sec2.o >/dev/null 2>&1
  1157. mv -f .deps/ioperf_sec2.Tpo .deps/ioperf_sec2.Plo
  1158. /bin/sh ../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -module -avoid-version -rpath /nowhere -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ioperf_sec2.la ioperf_sec2.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1159. libtool: link: gcc -shared .libs/ioperf_sec2.o -L/usr/lib -L/usr/lib/lib -lhdf5 -lz -lm -lsz -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,ioperf_sec2.so -o .libs/ioperf_sec2.so
  1160. libtool: link: ar cru .libs/ioperf_sec2.a ioperf_sec2.o
  1161. libtool: link: ranlib .libs/ioperf_sec2.a
  1162. libtool: link: ( cd ".libs" && rm -f "ioperf_sec2.la" && ln -s "../ioperf_sec2.la" "ioperf_sec2.la" )
  1163. /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_stdio.lo -MD -MP -MF .deps/ioperf_stdio.Tpo -c -o ioperf_stdio.lo ioperf_stdio.c
  1164. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_stdio.lo -MD -MP -MF .deps/ioperf_stdio.Tpo -c ioperf_stdio.c -fPIC -DPIC -o .libs/ioperf_stdio.o
  1165. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_stdio.lo -MD -MP -MF .deps/ioperf_stdio.Tpo -c ioperf_stdio.c -o ioperf_stdio.o >/dev/null 2>&1
  1166. mv -f .deps/ioperf_stdio.Tpo .deps/ioperf_stdio.Plo
  1167. /bin/sh ../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -module -avoid-version -rpath /nowhere -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ioperf_stdio.la ioperf_stdio.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1168. libtool: link: gcc -shared .libs/ioperf_stdio.o -L/usr/lib -L/usr/lib/lib -lhdf5 -lz -lm -lsz -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,ioperf_stdio.so -o .libs/ioperf_stdio.so
  1169. libtool: link: ar cru .libs/ioperf_stdio.a ioperf_stdio.o
  1170. libtool: link: ranlib .libs/ioperf_stdio.a
  1171. libtool: link: ( cd ".libs" && rm -f "ioperf_stdio.la" && ln -s "../ioperf_stdio.la" "ioperf_stdio.la" )
  1172. /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_hdf5.lo -MD -MP -MF .deps/ioperf_hdf5.Tpo -c -o ioperf_hdf5.lo ioperf_hdf5.c
  1173. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_hdf5.lo -MD -MP -MF .deps/ioperf_hdf5.Tpo -c ioperf_hdf5.c -fPIC -DPIC -o .libs/ioperf_hdf5.o
  1174. libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ioperf_hdf5.lo -MD -MP -MF .deps/ioperf_hdf5.Tpo -c ioperf_hdf5.c -o ioperf_hdf5.o >/dev/null 2>&1
  1175. mv -f .deps/ioperf_hdf5.Tpo .deps/ioperf_hdf5.Plo
  1176. /bin/sh ../libtool --tag=CC --mode=link gcc -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -module -avoid-version -rpath /nowhere -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ioperf_hdf5.la ioperf_hdf5.lo -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1177. libtool: link: gcc -shared .libs/ioperf_hdf5.o -L/usr/lib -L/usr/lib/lib -lhdf5 -lz -lm -lsz -march=x86-64 -mtune=generic -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-soname -Wl,ioperf_hdf5.so -o .libs/ioperf_hdf5.so
  1178. libtool: link: ar cru .libs/ioperf_hdf5.a ioperf_hdf5.o
  1179. libtool: link: ranlib .libs/ioperf_hdf5.a
  1180. libtool: link: ( cd ".libs" && rm -f "ioperf_hdf5.la" && ln -s "../ioperf_hdf5.la" "ioperf_hdf5.la" )
  1181. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT arbpoly.o -MD -MP -MF .deps/arbpoly.Tpo -c -o arbpoly.o arbpoly.c
  1182. mv -f .deps/arbpoly.Tpo .deps/arbpoly.Po
  1183. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o arbpoly arbpoly.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1184. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/arbpoly arbpoly.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1185. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT arbpoly2d.o -MD -MP -MF .deps/arbpoly2d.Tpo -c -o arbpoly2d.o arbpoly2d.c
  1186. mv -f .deps/arbpoly2d.Tpo .deps/arbpoly2d.Po
  1187. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o arbpoly2d arbpoly2d.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1188. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/arbpoly2d arbpoly2d.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1189. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT array.o -MD -MP -MF .deps/array.Tpo -c -o array.o array.c
  1190. mv -f .deps/array.Tpo .deps/array.Po
  1191. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o array array.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1192. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/array array.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1193. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT extface.o -MD -MP -MF .deps/extface.Tpo -c -o extface.o extface.c
  1194. mv -f .deps/extface.Tpo .deps/extface.Po
  1195. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o extface extface.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1196. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/extface extface.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1197. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT multi_test.o -MD -MP -MF .deps/multi_test.Tpo -c -o multi_test.o multi_test.c
  1198. mv -f .deps/multi_test.Tpo .deps/multi_test.Po
  1199. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o multi_test multi_test.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1200. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/multi_test multi_test.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1201. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT partial_io.o -MD -MP -MF .deps/partial_io.Tpo -c -o partial_io.o partial_io.c
  1202. mv -f .deps/partial_io.Tpo .deps/partial_io.Po
  1203. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o partial_io partial_io.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1204. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/partial_io partial_io.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1205. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT point.o -MD -MP -MF .deps/point.Tpo -c -o point.o point.c
  1206. mv -f .deps/point.Tpo .deps/point.Po
  1207. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o point point.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1208. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/point point.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1209. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT group_test.o -MD -MP -MF .deps/group_test.Tpo -c -o group_test.o group_test.c
  1210. mv -f .deps/group_test.Tpo .deps/group_test.Po
  1211. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o group_test group_test.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1212. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/group_test group_test.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1213. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT listtypes.o -MD -MP -MF .deps/listtypes.Tpo -c -o listtypes.o listtypes.c
  1214. mv -f .deps/listtypes.Tpo .deps/listtypes.Po
  1215. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT listtypes_main.o -MD -MP -MF .deps/listtypes_main.Tpo -c -o listtypes_main.o listtypes_main.c
  1216. mv -f .deps/listtypes_main.Tpo .deps/listtypes_main.Po
  1217. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o listtypes listtypes.o listtypes_main.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1218. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/listtypes listtypes.o listtypes_main.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1219. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT simple.o -MD -MP -MF .deps/simple.Tpo -c -o simple.o simple.c
  1220. mv -f .deps/simple.Tpo .deps/simple.Po
  1221. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o simple simple.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1222. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/simple simple.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1223. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ucd.o -MD -MP -MF .deps/ucd.Tpo -c -o ucd.o ucd.c
  1224. mv -f .deps/ucd.Tpo .deps/ucd.Po
  1225. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ucd ucd.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1226. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/ucd ucd.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1227. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ucdsamp3.o -MD -MP -MF .deps/ucdsamp3.Tpo -c -o ucdsamp3.o ucdsamp3.c
  1228. mv -f .deps/ucdsamp3.Tpo .deps/ucdsamp3.Po
  1229. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ucdsamp3 ucdsamp3.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1230. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/ucdsamp3 ucdsamp3.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1231. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT testall.o -MD -MP -MF .deps/testall.Tpo -c -o testall.o testall.c
  1232. mv -f .deps/testall.Tpo .deps/testall.Po
  1233. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o testall testall.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1234. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/testall testall.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1235. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT alltypes.o -MD -MP -MF .deps/alltypes.Tpo -c -o alltypes.o alltypes.c
  1236. mv -f .deps/alltypes.Tpo .deps/alltypes.Po
  1237. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o alltypes alltypes.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1238. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/alltypes alltypes.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1239. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT obj.o -MD -MP -MF .deps/obj.Tpo -c -o obj.o obj.c
  1240. mv -f .deps/obj.Tpo .deps/obj.Po
  1241. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o obj obj.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1242. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/obj obj.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1243. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT onehex.o -MD -MP -MF .deps/onehex.Tpo -c -o onehex.o onehex.c
  1244. mv -f .deps/onehex.Tpo .deps/onehex.Po
  1245. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o onehex onehex.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1246. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/onehex onehex.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1247. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT oneprism.o -MD -MP -MF .deps/oneprism.Tpo -c -o oneprism.o oneprism.c
  1248. mv -f .deps/oneprism.Tpo .deps/oneprism.Po
  1249. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o oneprism oneprism.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1250. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/oneprism oneprism.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1251. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT onepyramid.o -MD -MP -MF .deps/onepyramid.Tpo -c -o onepyramid.o onepyramid.c
  1252. mv -f .deps/onepyramid.Tpo .deps/onepyramid.Po
  1253. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o onepyramid onepyramid.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1254. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/onepyramid onepyramid.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1255. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT onetet.o -MD -MP -MF .deps/onetet.Tpo -c -o onetet.o onetet.c
  1256. mv -f .deps/onetet.Tpo .deps/onetet.Po
  1257. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o onetet onetet.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1258. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/onetet onetet.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1259. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT TestReadMask.o -MD -MP -MF .deps/TestReadMask.Tpo -c -o TestReadMask.o TestReadMask.c
  1260. mv -f .deps/TestReadMask.Tpo .deps/TestReadMask.Po
  1261. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o TestReadMask TestReadMask.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1262. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/TestReadMask TestReadMask.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1263. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT subhex.o -MD -MP -MF .deps/subhex.Tpo -c -o subhex.o subhex.c
  1264. mv -f .deps/subhex.Tpo .deps/subhex.Po
  1265. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o subhex subhex.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1266. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/subhex subhex.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1267. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT twohex.o -MD -MP -MF .deps/twohex.Tpo -c -o twohex.o twohex.c
  1268. mv -f .deps/twohex.Tpo .deps/twohex.Po
  1269. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o twohex twohex.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1270. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/twohex twohex.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1271. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT multispec.o -MD -MP -MF .deps/multispec.Tpo -c -o multispec.o multispec.c
  1272. mv -f .deps/multispec.Tpo .deps/multispec.Po
  1273. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o multispec multispec.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1274. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/multispec multispec.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1275. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT specmix.o -MD -MP -MF .deps/specmix.Tpo -c -o specmix.o specmix.c
  1276. mv -f .deps/specmix.Tpo .deps/specmix.Po
  1277. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o specmix specmix.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1278. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/specmix specmix.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1279. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT sami.o -MD -MP -MF .deps/sami.Tpo -c -o sami.o sami.c
  1280. mv -f .deps/sami.Tpo .deps/sami.Po
  1281. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o sami sami.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1282. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/sami sami.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1283. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT spec.o -MD -MP -MF .deps/spec.Tpo -c -o spec.o spec.c
  1284. mv -f .deps/spec.Tpo .deps/spec.Po
  1285. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o spec spec.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1286. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/spec spec.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1287. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT cpz1plt.o -MD -MP -MF .deps/cpz1plt.Tpo -c -o cpz1plt.o cpz1plt.c
  1288. mv -f .deps/cpz1plt.Tpo .deps/cpz1plt.Po
  1289. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o cpz1plt cpz1plt.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1290. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/cpz1plt cpz1plt.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1291. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT merge_block.o -MD -MP -MF .deps/merge_block.Tpo -c -o merge_block.o merge_block.c
  1292. mv -f .deps/merge_block.Tpo .deps/merge_block.Po
  1293. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o merge_block merge_block.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1294. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/merge_block merge_block.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1295. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT mat3d_3across.o -MD -MP -MF .deps/mat3d_3across.Tpo -c -o mat3d_3across.o mat3d_3across.c
  1296. mv -f .deps/mat3d_3across.Tpo .deps/mat3d_3across.Po
  1297. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o mat3d_3across mat3d_3across.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1298. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/mat3d_3across mat3d_3across.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1299. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT ucd1d.o -MD -MP -MF .deps/ucd1d.Tpo -c -o ucd1d.o ucd1d.c
  1300. mv -f .deps/ucd1d.Tpo .deps/ucd1d.Po
  1301. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o ucd1d ucd1d.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1302. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/ucd1d ucd1d.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1303. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT wave.o -MD -MP -MF .deps/wave.Tpo -c -o wave.o wave.c
  1304. mv -f .deps/wave.Tpo .deps/wave.Po
  1305. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o wave wave.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1306. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/wave wave.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1307. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT multi_file.o -MD -MP -MF .deps/multi_file.Tpo -c -o multi_file.o multi_file.c
  1308. mv -f .deps/multi_file.Tpo .deps/multi_file.Po
  1309. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o multi_file multi_file.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1310. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/multi_file multi_file.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1311. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT polyzl.o -MD -MP -MF .deps/polyzl.Tpo -c -o polyzl.o polyzl.c
  1312. mv -f .deps/polyzl.Tpo .deps/polyzl.Po
  1313. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o polyzl polyzl.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1314. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/polyzl polyzl.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1315. gcc -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -Wdeclaration-after-statement -MT csg.o -MD -MP -MF .deps/csg.Tpo -c -o csg.o csg.c
  1316. mv -f .deps/csg.Tpo .deps/csg.Po
  1317. /bin/sh ../libtool --tag=CXX --mode=link g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -L/usr/lib -L/usr/lib/lib -Wl,-O1,--sort-common,--as-needed,-z,relro -L/usr/lib -L/usr/lib/lib -o csg csg.o ../src/libsiloh5.la -lhdf5 -lsz -lsz -lz -lz -lm -lsz
  1318. libtool: link: g++ -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z -Wl,relro -o .libs/csg csg.o -L/usr/lib -L/usr/lib/lib ../src/.libs/libsiloh5.so -lhdf5 -lz -lm -lsz
  1319. g++ -DHAVE_CONFIG_H -I. -I.. -I./../src/silo -I./../src/silo -I/usr/include -I/usr/include -D_FORTIFY_SOURCE=2 -I/usr/include -rdynamic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT rocket-rocket.o -MD -MP -MF .deps/rocket-rocket.Tpo -c -o rocket-rocket.o `test -f 'rocket.cxx' || echo './'`rocket.cxx
  1320. make[1]: Leaving directory '/tmp/yaourt-tmp-mattia/aur-silo/src/silo-4.10.2/tests'
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