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- import os
- import csv
- import re
- files=os.listdir("testdir")
- regex=re.compile(r"^([^.]*).*")
- def normalize_text(s):
- return s[0:s.find('.')]
- with open('new-genes.tsv','w') as fout:
- writer = csv.writer(fout, delimiter='\t')
- writer.writerow(['head0', 'head3', 'tissue_type'])
- # writer.writerow([text.encode('utf-8'), excerpt.encode('utf-8')])
- for filename in files:
- with open("testdir/" + filename, 'r') as csvfile:
- reader = csv.DictReader(csvfile) # jenn: '\t'
- tissue_type = normalize_text(filename)
- print(tissue_type)
- for row in reader:
- writer.writerow([row['head0'], row['head3'], tissue_type])
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