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misnomer001

russia_sarmatian pass

misnomer001
Aug 8th, 2020 (edited)
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  1. qpAdm: parameter file: par_alalakh
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left1
  6. popright: right1
  7. details: YES
  8. allsnps: YES
  9. ## qpAdm version: 1201
  10. seed: 1848257628
  11.  
  12. left pops:
  13. Russia_Sarmatian.SG
  14. Russia_Srubnaya
  15. Russia_Tagar.SG
  16. Turkmenistan_IA.SG
  17.  
  18. right pops:
  19. Cameroon_SMA.DG
  20. Russia_HG_Karelia
  21. Tyumen_HG
  22. Jordan_PPNB
  23. Serbia_Mesolithic_IronGates
  24. Anatolia_N
  25. Iran_GanjDareh_N
  26. Russia_UstBelaya_Angara
  27. ONG.SG
  28. Botai
  29.  
  30. codimension 1
  31. f4info:
  32. f4rank: 2 dof: 7 chisq: 11.737 tail: 0.10955642 dofdiff: 9 chisqdiff: -11.737 taildiff: 1
  33. B:
  34. scale 1.000 1.000
  35. Russia_HG_Karelia 1.413 0.381
  36. Tyumen_HG 0.772 0.801
  37. Jordan_PPNB 0.919 -1.011
  38. Serbia_Mesolithic_IronGates 1.919 0.054
  39. Anatolia_N 1.210 -0.734
  40. Iran_GanjDareh_N 0.128 -1.272
  41. Russia_UstBelaya_Angara -0.223 1.904
  42. ONG.SG -0.142 0.846
  43. Botai 0.574 0.833
  44. A:
  45. scale 814.454 996.088
  46. Russia_Srubnaya 1.613 -0.364
  47. Russia_Tagar.SG 0.048 0.979
  48. Turkmenistan_IA.SG -0.629 -1.382
  49.  
  50.  
  51. full rank
  52. f4info:
  53. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 7 chisqdiff: 11.737 taildiff: 0.10955642
  54. B:
  55. scale 473.882 940.768 687.317
  56. Russia_HG_Karelia 1.261 0.466 -1.102
  57. Tyumen_HG 0.790 1.297 -0.606
  58. Jordan_PPNB 1.005 -0.986 0.430
  59. Serbia_Mesolithic_IronGates 1.855 0.275 -0.924
  60. Anatolia_N 1.329 -0.462 0.245
  61. Iran_GanjDareh_N 0.449 -0.942 1.414
  62. Russia_UstBelaya_Angara -0.460 1.939 -1.483
  63. ONG.SG -0.205 0.913 -0.578
  64. Botai 0.340 0.600 -1.338
  65. A:
  66. scale 1.732 1.732 1.732
  67. Russia_Srubnaya 1.732 0.000 0.000
  68. Russia_Tagar.SG 0.000 1.732 0.000
  69. Turkmenistan_IA.SG 0.000 0.000 1.732
  70.  
  71.  
  72. best coefficients: 0.119 0.534 0.347
  73. totmean: 0.119 0.534 0.347
  74. boot mean: 0.118 0.534 0.348
  75. std. errors: 0.044 0.041 0.047
  76.  
  77. error covariance (* 1,000,000)
  78. 1894 -691 -1204
  79. -691 1693 -1003
  80. -1204 -1003 2207
  81.  
  82.  
  83. summ: Russia_Sarmatian.SG 3 0.109556 0.118 0.534 0.348 1894 -691 -1204 1693 -1003 ...
  84. 2207
  85.  
  86. fixed pat wt dof chisq tail prob
  87. 000 0 7 11.737 0.109556 0.119 0.534 0.347
  88. 001 1 8 93.672 8.34016e-17 0.302 0.698 0.000
  89. 010 1 8 120.939 2.12176e-22 0.056 0.000 0.944
  90. 100 1 8 19.067 0.014504 0.000 0.576 0.424
  91. 011 2 9 532.198 0 1.000 0.000 0.000
  92. 101 2 9 159.995 7.44418e-30 0.000 1.000 0.000
  93. 110 2 9 121.120 7.88139e-22 0.000 0.000 1.000
  94. best pat: 000 0.109556 - -
  95. best pat: 100 0.014504 chi(nested): 7.331 p-value for nested model: 0.00677922
  96. best pat: 110 7.88139e-22 chi(nested): 102.052 p-value for nested model: 5.40721e-24
  97.  
  98. coeffs: 0.119 0.534 0.347
  99.  
  100. ## dscore:: f_4(Base, Fit, Rbase, right2)
  101. ## genstat:: f_4(Base, Fit, right1, right2)
  102.  
  103. details: Russia_Srubnaya Russia_HG_Karelia 0.002660 7.810029
  104. details: Russia_Tagar.SG Russia_HG_Karelia 0.000495 1.372883
  105. details: Turkmenistan_IA.SG Russia_HG_Karelia -0.001604 -2.876234
  106. dscore: Russia_HG_Karelia f4: 0.000025 Z: 0.073020
  107.  
  108. details: Russia_Srubnaya Tyumen_HG 0.001667 4.753167
  109. details: Russia_Tagar.SG Tyumen_HG 0.001379 3.810032
  110. details: Turkmenistan_IA.SG Tyumen_HG -0.000881 -1.460243
  111. dscore: Tyumen_HG f4: 0.000630 Z: 1.785174
  112.  
  113. details: Russia_Srubnaya Jordan_PPNB 0.002121 6.576942
  114. details: Russia_Tagar.SG Jordan_PPNB -0.001048 -3.077034
  115. details: Turkmenistan_IA.SG Jordan_PPNB 0.000625 1.170732
  116. dscore: Jordan_PPNB f4: -0.000090 Z: -0.266751
  117.  
  118. details: Russia_Srubnaya Serbia_Mesolithic_IronGates 0.003914 15.009505
  119. details: Russia_Tagar.SG Serbia_Mesolithic_IronGates 0.000292 1.103656
  120. details: Turkmenistan_IA.SG Serbia_Mesolithic_IronGates -0.001344 -3.005275
  121. dscore: Serbia_Mesolithic_IronGates f4: 0.000157 Z: 0.595998
  122.  
  123. details: Russia_Srubnaya Anatolia_N 0.002804 12.179798
  124. details: Russia_Tagar.SG Anatolia_N -0.000491 -2.038767
  125. details: Turkmenistan_IA.SG Anatolia_N 0.000357 0.865852
  126. dscore: Anatolia_N f4: 0.000196 Z: 0.811636
  127.  
  128. details: Russia_Srubnaya Iran_GanjDareh_N 0.000947 3.866111
  129. details: Russia_Tagar.SG Iran_GanjDareh_N -0.001001 -3.926245
  130. details: Turkmenistan_IA.SG Iran_GanjDareh_N 0.002057 4.848395
  131. dscore: Iran_GanjDareh_N f4: 0.000292 Z: 1.158518
  132.  
  133. details: Russia_Srubnaya Russia_UstBelaya_Angara -0.000971 -3.751300
  134. details: Russia_Tagar.SG Russia_UstBelaya_Angara 0.002061 7.197324
  135. details: Turkmenistan_IA.SG Russia_UstBelaya_Angara -0.002157 -4.823199
  136. dscore: Russia_UstBelaya_Angara f4: 0.000236 Z: 0.865548
  137.  
  138. details: Russia_Srubnaya ONG.SG -0.000433 -1.711583
  139. details: Russia_Tagar.SG ONG.SG 0.000970 3.719780
  140. details: Turkmenistan_IA.SG ONG.SG -0.000841 -1.909392
  141. dscore: ONG.SG f4: 0.000175 Z: 0.673923
  142.  
  143. details: Russia_Srubnaya Botai 0.000718 2.317335
  144. details: Russia_Tagar.SG Botai 0.000638 1.987934
  145. details: Turkmenistan_IA.SG Botai -0.001946 -3.752033
  146. dscore: Botai f4: -0.000249 Z: -0.796597
  147.  
  148. gendstat: Cameroon_SMA.DG Russia_HG_Karelia 0.073
  149. gendstat: Cameroon_SMA.DG Tyumen_HG 1.785
  150. gendstat: Cameroon_SMA.DG Jordan_PPNB -0.267
  151. gendstat: Cameroon_SMA.DG Serbia_Mesolithic_IronGates 0.596
  152. gendstat: Cameroon_SMA.DG Anatolia_N 0.812
  153. gendstat: Cameroon_SMA.DG Iran_GanjDareh_N 1.159
  154. gendstat: Cameroon_SMA.DG Russia_UstBelaya_Angara 0.866
  155. gendstat: Cameroon_SMA.DG ONG.SG 0.674
  156. gendstat: Cameroon_SMA.DG Botai -0.797
  157. gendstat: Russia_HG_Karelia Tyumen_HG 1.669
  158. gendstat: Russia_HG_Karelia Jordan_PPNB -0.282
  159. gendstat: Russia_HG_Karelia Serbia_Mesolithic_IronGates 0.465
  160. gendstat: Russia_HG_Karelia Anatolia_N 0.551
  161. gendstat: Russia_HG_Karelia Iran_GanjDareh_N 0.807
  162. gendstat: Russia_HG_Karelia Russia_UstBelaya_Angara 0.676
  163. gendstat: Russia_HG_Karelia ONG.SG 0.425
  164. gendstat: Russia_HG_Karelia Botai -0.847
  165. gendstat: Tyumen_HG Jordan_PPNB -1.696
  166. gendstat: Tyumen_HG Serbia_Mesolithic_IronGates -1.430
  167. gendstat: Tyumen_HG Anatolia_N -1.295
  168. gendstat: Tyumen_HG Iran_GanjDareh_N -0.972
  169. gendstat: Tyumen_HG Russia_UstBelaya_Angara -1.234
  170. gendstat: Tyumen_HG ONG.SG -1.354
  171. gendstat: Tyumen_HG Botai -2.811
  172. gendstat: Jordan_PPNB Serbia_Mesolithic_IronGates 0.780
  173. gendstat: Jordan_PPNB Anatolia_N 1.075
  174. gendstat: Jordan_PPNB Iran_GanjDareh_N 1.188
  175. gendstat: Jordan_PPNB Russia_UstBelaya_Angara 0.942
  176. gendstat: Jordan_PPNB ONG.SG 0.775
  177. gendstat: Jordan_PPNB Botai -0.426
  178. gendstat: Serbia_Mesolithic_IronGates Anatolia_N 0.226
  179. gendstat: Serbia_Mesolithic_IronGates Iran_GanjDareh_N 0.537
  180. gendstat: Serbia_Mesolithic_IronGates Russia_UstBelaya_Angara 0.322
  181. gendstat: Serbia_Mesolithic_IronGates ONG.SG 0.070
  182. gendstat: Serbia_Mesolithic_IronGates Botai -1.509
  183. gendstat: Anatolia_N Iran_GanjDareh_N 0.442
  184. gendstat: Anatolia_N Russia_UstBelaya_Angara 0.167
  185. gendstat: Anatolia_N ONG.SG -0.089
  186. gendstat: Anatolia_N Botai -1.580
  187. gendstat: Iran_GanjDareh_N Russia_UstBelaya_Angara -0.212
  188. gendstat: Iran_GanjDareh_N ONG.SG -0.466
  189. gendstat: Iran_GanjDareh_N Botai -1.809
  190. gendstat: Russia_UstBelaya_Angara ONG.SG -0.286
  191. gendstat: Russia_UstBelaya_Angara Botai -1.940
  192. gendstat: ONG.SG Botai -1.475
  193.  
  194. ##end of qpAdm: 5.532 seconds cpu 0.807 Mbytes in use
  195.  
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