SHOW:
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- or go back to the newest paste.
| 1 | source("http://bioconductor.org/biocLite.R")
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| 2 | biocLite("org.Hs.eg.db")
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| 3 | library("org.Hs.eg.db")
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| 4 | ||
| 5 | # mapped_genes are all the genes that org.HS.egPMID covers (the HS refers to homosapien). These genes are in Entrez format. | |
| 6 | # entrez2Pmid is a list taking entrez gene ids to a vector of Pmids. | |
| 7 | ||
| 8 | mapped_genes <- mappedkeys(org.Hs.egPMID) | |
| 9 | entrez2Pmid <- as.list(org.Hs.egPMID[mapped_genes]) | |
| 10 | - | entrez2Pmid <- as.list(org.Hs.egPMID[mapped_genes]) |
| 10 | + | |
| 11 | # now if you have an entrez gene id you can look up the relevant papers by doing | |
| 12 | ||
| 13 | entrez2Pmid[myEntrezGene] |
