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Revised ToDo List:
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-Dump 1.0/1.x and compare them
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-Remove the licence check from apk. Apparently the app Lucky Patcher can just do this after your device is rooted. So this is more of a convenient factor on your shield since you do own it, but for everyone else it would be nice if we would remove the licence check permanently from the apk we give out so other people don't neccesarily have to root their android device to do it and play tp. Just google a tutorial how to use it and hopefully it just works and the shield uses the same license check type. If it worked the check should just be gone and you should be able to boot tp offline (https://luckypatcher.co/remove-license-verification-lucky-patcher)
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5:50
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-Create custom gamepad mapping for connected GC controller. Rooting the shield allows us to create custom key layout files and save them specifically for the GC controller. This allows to map buttons/sticks however you want including flipping the C Stick for your camera preferences. Also adjusting the deadzone is possible this way which might be neccesary for the authentic feel. The app Gamepad Tester (https://play.google.com/store/apps/details?id=ru.elron.gamepadtester&hl=en) + rooted device allows to see the pressed buttons, fix the mappings and axis and then press save (http://prntscr.com/iilj8o). You now have a proper .kl file for your GC controller and can manually edit it in notepad for the fine tuning e.g. dead zones.
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-Setup Memory Hacking/Searching. The root app Gameguardian seems like the perfect app for this. Also requires a mouse. Overlays a window over the game which you can move around and open to do memory search/value editing in the game
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-Use lua scripting support in Game Guardian after setting it up to apply game patches such as practice codes or a load timer to compare the Shield to GC
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4:08  
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5:35
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Priority:
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12-
9:43 (-3:53)
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0. Connect a Mouse to the Shield
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1. Extract APK/OBB files
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2. Root Device
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3. Remove Licence Check
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4. Gamepad Mapping
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5. Memory Hacking/Searching (ideally over network)
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6. Apply AR codes/hacks at runtime
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Extract APK:
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https://play.google.com/store/apps/details?id=com.ext.ui
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ES File Explorer (Android/obb/packagename contains tp)
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License Removal:
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https://luckypatcher.co/remove-license-verification-lucky-patcher/
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Shield Controller:
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Best sources:
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http://freaktab.com/forum/development-area/android-os-development-discussions/639433-tutorial-redefine-any-keys-of-your-android-keybord-remote-controller-gamepad-to-your-needs
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https://play.google.com/store/apps/details?id=ru.elron.gamepadtester&hl=en
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https://play.google.com/store/apps/details?id=innerlife.keyboard.multilanguagekeymapredefiner&hl=en
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https://source.android.com/devices/input/key-layout-files
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https://play.google.com/store/apps/details?id=com.irishin.buttonsremapper&hl=en
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https://play.google.com/store/apps/details?id=com.tincore.and.keymapper
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https://forum.xda-developers.com/showthread.php?t=2492251 (stick deadzones)
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Testing:
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https://play.google.com/store/apps/details?id=com.chiarly.gamepad&hl=en
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https://play.google.com/store/apps/details?id=aws.apps.keyeventdisplay&hl=en
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https://github.com/chrisboyle/keytest/downloads
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https://play.google.com/store/apps/details?id=com.catalyst06.gamecontrollerverifier&hl=en
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Memory Hacking:
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https://gameguardian.net/help/
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https://gameguardian.net/download
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https://gameguardian.net/forum/topic/8306-nvidia-shield-android-tv/
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http://gamekiller.co/
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https://sbgamehacker.net/
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Patching/Hooking of Native Java:
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http://resources.infosecinstitute.com/android-hacking-and-security-part-25-hooking-and-patching-android-apps-using-xposed-framework/
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http://api.xposed.info/reference/packages.html
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No S+Q:
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Map Glitch:
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Enter Spring-Post Cage Break Fadeout: 5:35
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=5:35
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No Map Glitch:
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Enter Spring-Enter Spring post Slingshot: 5:52
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Enter Spring-Post Cage Break Fadeout 4:03
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9:55 (-4:20)
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-12 from slingshot in forest + toad bomb explosion 
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=9:43
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-1 minute from Milk Gorge Warp Cancel (backtrack + saved warp to kak + kakarok skip)
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=8:43 (-3:08)
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+30 seconds to warp ZD post zora armour + get perm bag with normal bombs + swim back up - araeflos deathwarp and all bomb strats
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=9:13 (-3:38)
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+8 seconds no B&C strats in desert and AG
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=9:21 (-3:46)
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+3 seconds no map glitch strat to KB1
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=9:24 (-3:49)
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+18 from having to raise the mirror - warp timesave
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=9:42 (-4:07)
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+47 From entering SP zone-Get Asheis Sketch-Post Warp to Kak
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=10:29 (-4:54)
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+25 Post Warp to before Dig Hole (Wolf)
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=10:54 (-5:19)
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+2:13 from before Dig Hole-Upgrade-Warp ZD-Fish Reekfish-Sniff-Enter SP
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=13:07 (-7:32)
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-30 from not having to do map glitch + howling
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=12:37 (-7:02)