Advertisement
Not a member of Pastebin yet?
Sign Up,
it unlocks many cool features!
- ---------------------------------------------------------------------------
- KeyError Traceback (most recent call last)
- /anaconda/lib/python3.6/site-packages/pandas/core/indexes/base.py in get_loc(self, key, method, tolerance)
- 2392 try:
- -> 2393 return self._engine.get_loc(key)
- 2394 except KeyError:
- pandas/_libs/index.pyx in pandas._libs.index.IndexEngine.get_loc (pandas/_libs/index.c:5239)()
- pandas/_libs/index.pyx in pandas._libs.index.IndexEngine.get_loc (pandas/_libs/index.c:5085)()
- pandas/_libs/hashtable_class_helper.pxi in pandas._libs.hashtable.PyObjectHashTable.get_item (pandas/_libs/hashtable.c:20405)()
- pandas/_libs/hashtable_class_helper.pxi in pandas._libs.hashtable.PyObjectHashTable.get_item (pandas/_libs/hashtable.c:20359)()
- KeyError: 'CDKN2A mRNA Expression (RNA Seq V2 RSEM)'
- During handling of the above exception, another exception occurred:
- KeyError Traceback (most recent call last)
- <ipython-input-57-9a188e96fe68> in <module>()
- ----> 1 me.plot(kind='scatter', x='CDKN2A mRNA Expression (RNA Seq V2 RSEM)', y='CDKN2A Methylation')
- /anaconda/lib/python3.6/site-packages/pandas/plotting/_core.py in __call__(self, x, y, kind, ax, subplots, sharex, sharey, layout, figsize, use_index, title, grid, legend, style, logx, logy, loglog, xticks, yticks, xlim, ylim, rot, fontsize, colormap, table, yerr, xerr, secondary_y, sort_columns, **kwds)
- 2618 fontsize=fontsize, colormap=colormap, table=table,
- 2619 yerr=yerr, xerr=xerr, secondary_y=secondary_y,
- -> 2620 sort_columns=sort_columns, **kwds)
- 2621 __call__.__doc__ = plot_frame.__doc__
- 2622
- /anaconda/lib/python3.6/site-packages/pandas/plotting/_core.py in plot_frame(data, x, y, kind, ax, subplots, sharex, sharey, layout, figsize, use_index, title, grid, legend, style, logx, logy, loglog, xticks, yticks, xlim, ylim, rot, fontsize, colormap, table, yerr, xerr, secondary_y, sort_columns, **kwds)
- 1855 yerr=yerr, xerr=xerr,
- 1856 secondary_y=secondary_y, sort_columns=sort_columns,
- -> 1857 **kwds)
- 1858
- 1859
- /anaconda/lib/python3.6/site-packages/pandas/plotting/_core.py in _plot(data, x, y, subplots, ax, kind, **kwds)
- 1680 plot_obj = klass(data, subplots=subplots, ax=ax, kind=kind, **kwds)
- 1681
- -> 1682 plot_obj.generate()
- 1683 plot_obj.draw()
- 1684 return plot_obj.result
- /anaconda/lib/python3.6/site-packages/pandas/plotting/_core.py in generate(self)
- 236 self._compute_plot_data()
- 237 self._setup_subplots()
- --> 238 self._make_plot()
- 239 self._add_table()
- 240 self._make_legend()
- /anaconda/lib/python3.6/site-packages/pandas/plotting/_core.py in _make_plot(self)
- 829 else:
- 830 label = None
- --> 831 scatter = ax.scatter(data[x].values, data[y].values, c=c_values,
- 832 label=label, cmap=cmap, **self.kwds)
- 833 if cb:
- /anaconda/lib/python3.6/site-packages/pandas/core/frame.py in __getitem__(self, key)
- 2060 return self._getitem_multilevel(key)
- 2061 else:
- -> 2062 return self._getitem_column(key)
- 2063
- 2064 def _getitem_column(self, key):
- /anaconda/lib/python3.6/site-packages/pandas/core/frame.py in _getitem_column(self, key)
- 2067 # get column
- 2068 if self.columns.is_unique:
- -> 2069 return self._get_item_cache(key)
- 2070
- 2071 # duplicate columns & possible reduce dimensionality
- /anaconda/lib/python3.6/site-packages/pandas/core/generic.py in _get_item_cache(self, item)
- 1532 res = cache.get(item)
- 1533 if res is None:
- -> 1534 values = self._data.get(item)
- 1535 res = self._box_item_values(item, values)
- 1536 cache[item] = res
- /anaconda/lib/python3.6/site-packages/pandas/core/internals.py in get(self, item, fastpath)
- 3588
- 3589 if not isnull(item):
- -> 3590 loc = self.items.get_loc(item)
- 3591 else:
- 3592 indexer = np.arange(len(self.items))[isnull(self.items)]
- /anaconda/lib/python3.6/site-packages/pandas/core/indexes/base.py in get_loc(self, key, method, tolerance)
- 2393 return self._engine.get_loc(key)
- 2394 except KeyError:
- -> 2395 return self._engine.get_loc(self._maybe_cast_indexer(key))
- 2396
- 2397 indexer = self.get_indexer([key], method=method, tolerance=tolerance)
- pandas/_libs/index.pyx in pandas._libs.index.IndexEngine.get_loc (pandas/_libs/index.c:5239)()
- pandas/_libs/index.pyx in pandas._libs.index.IndexEngine.get_loc (pandas/_libs/index.c:5085)()
- pandas/_libs/hashtable_class_helper.pxi in pandas._libs.hashtable.PyObjectHashTable.get_item (pandas/_libs/hashtable.c:20405)()
- pandas/_libs/hashtable_class_helper.pxi in pandas._libs.hashtable.PyObjectHashTable.get_item (pandas/_libs/hashtable.c:20359)()
- KeyError: 'CDKN2A mRNA Expression (RNA Seq V2 RSEM)'
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement