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- 210901-12:29:14,126 nipype.workflow INFO:
- Generated workflow graph: /home/users/hassan.bassam/FS_analysis/output/workingdir/l1analysis/graph.png (graph2use=colored, simple_form=True).
- 210901-12:29:14,287 nipype.workflow INFO:
- Workflow l1analysis settings: ['check', 'execution', 'logging', 'monitoring']
- 210901-12:29:15,149 nipype.workflow INFO:
- Running in parallel.
- 210901-12:29:15,153 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 10 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- /home/users/hassan.bassam/.local/lib/python3.8/site-packages/nilearn/datasets/__init__.py:86: FutureWarning: Fetchers from the nilearn.datasets module will be updated in version 0.9 to return python strings instead of bytes and Pandas dataframes instead of Numpy arrays.
- warn("Fetchers from the nilearn.datasets module will be "
- 210901-12:29:15,376 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/selectfiles".
- 210901-12:29:15,379 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/selectfiles".
- 210901-12:29:15,381 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/selectfiles".
- 210901-12:29:15,383 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/selectfiles".
- 210901-12:29:15,385 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/selectfiles".
- 210901-12:29:15,387 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/selectfiles".
- 210901-12:29:15,390 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/selectfiles".
- 210901-12:29:15,392 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/selectfiles".
- 210901-12:29:15,394 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/selectfiles".
- 210901-12:29:15,394 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,396 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,397 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.selectfiles" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/selectfiles".
- 210901-12:29:15,401 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,404 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,406 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,407 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,409 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,409 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,408 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,410 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,413 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,413 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,415 nipype.workflow INFO:
- [Node] Running "selectfiles" ("nipype.interfaces.io.SelectFiles")
- 210901-12:29:15,417 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,418 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,420 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,421 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,422 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,425 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:15,427 nipype.workflow INFO:
- [Node] Finished "l1analysis.selectfiles".
- 210901-12:29:17,155 nipype.workflow INFO:
- [Job 0] Completed (l1analysis.selectfiles).
- 210901-12:29:17,157 nipype.workflow INFO:
- [Job 9] Completed (l1analysis.selectfiles).
- 210901-12:29:17,158 nipype.workflow INFO:
- [Job 18] Completed (l1analysis.selectfiles).
- 210901-12:29:17,158 nipype.workflow INFO:
- [Job 27] Completed (l1analysis.selectfiles).
- 210901-12:29:17,159 nipype.workflow INFO:
- [Job 36] Completed (l1analysis.selectfiles).
- 210901-12:29:17,160 nipype.workflow INFO:
- [Job 45] Completed (l1analysis.selectfiles).
- 210901-12:29:17,161 nipype.workflow INFO:
- [Job 54] Completed (l1analysis.selectfiles).
- 210901-12:29:17,162 nipype.workflow INFO:
- [Job 63] Completed (l1analysis.selectfiles).
- 210901-12:29:17,163 nipype.workflow INFO:
- [Job 72] Completed (l1analysis.selectfiles).
- 210901-12:29:17,164 nipype.workflow INFO:
- [Job 81] Completed (l1analysis.selectfiles).
- 210901-12:29:17,165 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 30 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- 210901-12:29:17,299 nipype.workflow INFO:
- [Job 1] Cached (l1analysis.getconfounds).
- 210901-12:29:17,302 nipype.workflow INFO:
- [Job 2] Cached (l1analysis.susan).
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- 210901-12:29:17,315 nipype.workflow INFO:
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- 210901-12:29:17,325 nipype.workflow INFO:
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- 210901-12:29:17,330 nipype.workflow INFO:
- [Job 37] Cached (l1analysis.getconfounds).
- 210901-12:29:17,332 nipype.workflow INFO:
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- 210901-12:29:19,157 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 25 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- 210901-12:29:19,271 nipype.workflow INFO:
- [Job 3] Cached (l1analysis.mask).
- 210901-12:29:19,307 nipype.workflow INFO:
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- 210901-12:29:19,329 nipype.workflow INFO:
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- 210901-12:29:19,355 nipype.workflow INFO:
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- 210901-12:29:19,436 nipype.workflow INFO:
- [Job 40] Cached (l1analysis.getsubjectinfo).
- 210901-12:29:19,439 nipype.workflow INFO:
- [Job 46] Cached (l1analysis.getconfounds).
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- [Job 47] Cached (l1analysis.susan).
- 210901-12:29:19,444 nipype.workflow INFO:
- [Job 49] Cached (l1analysis.getsubjectinfo).
- 210901-12:29:19,446 nipype.workflow INFO:
- [Job 55] Cached (l1analysis.getconfounds).
- 210901-12:29:21,159 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 18 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- 210901-12:29:21,317 nipype.workflow INFO:
- [Job 6] Cached (l1analysis.level1design).
- 210901-12:29:21,382 nipype.workflow INFO:
- [Job 15] Cached (l1analysis.level1design).
- 210901-12:29:21,445 nipype.workflow INFO:
- [Job 24] Cached (l1analysis.level1design).
- 210901-12:29:21,520 nipype.workflow INFO:
- [Job 33] Cached (l1analysis.level1design).
- 210901-12:29:21,573 nipype.workflow INFO:
- [Job 41] Cached (l1analysis.l1_spec).
- 210901-12:29:21,584 nipype.workflow INFO:
- [Job 48] Cached (l1analysis.mask).
- 210901-12:29:21,611 nipype.workflow INFO:
- [Job 50] Cached (l1analysis.l1_spec).
- 210901-12:29:21,614 nipype.workflow INFO:
- [Job 56] Cached (l1analysis.susan).
- 210901-12:29:21,616 nipype.workflow INFO:
- [Job 58] Cached (l1analysis.getsubjectinfo).
- 210901-12:29:21,619 nipype.workflow INFO:
- [Job 64] Cached (l1analysis.getconfounds).
- 210901-12:29:21,621 nipype.workflow INFO:
- [Job 65] Cached (l1analysis.susan).
- 210901-12:29:21,625 nipype.workflow INFO:
- [Job 67] Cached (l1analysis.getsubjectinfo).
- 210901-12:29:21,627 nipype.workflow INFO:
- [Job 73] Cached (l1analysis.getconfounds).
- 210901-12:29:21,630 nipype.workflow INFO:
- [Job 74] Cached (l1analysis.susan).
- 210901-12:29:23,160 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 15 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- 210901-12:29:23,280 nipype.workflow INFO:
- [Job 7] Cached (l1analysis.feat_spec).
- 210901-12:29:23,305 nipype.workflow INFO:
- [Job 16] Cached (l1analysis.feat_spec).
- 210901-12:29:23,332 nipype.workflow INFO:
- [Job 25] Cached (l1analysis.feat_spec).
- 210901-12:29:23,352 nipype.workflow INFO:
- [Job 34] Cached (l1analysis.feat_spec).
- 210901-12:29:23,410 nipype.workflow INFO:
- [Job 42] Cached (l1analysis.level1design).
- 210901-12:29:23,473 nipype.workflow INFO:
- [Job 51] Cached (l1analysis.level1design).
- 210901-12:29:23,488 nipype.workflow INFO:
- [Job 57] Cached (l1analysis.mask).
- 210901-12:29:23,504 nipype.workflow INFO:
- [Job 59] Cached (l1analysis.l1_spec).
- 210901-12:29:23,521 nipype.workflow INFO:
- [Job 66] Cached (l1analysis.mask).
- 210901-12:29:23,529 nipype.workflow INFO:
- [Job 68] Cached (l1analysis.l1_spec).
- 210901-12:29:23,547 nipype.workflow INFO:
- [Job 75] Cached (l1analysis.mask).
- 210901-12:29:23,550 nipype.workflow INFO:
- [Job 76] Cached (l1analysis.getsubjectinfo).
- 210901-12:29:23,554 nipype.workflow INFO:
- [Job 82] Cached (l1analysis.getconfounds).
- 210901-12:29:23,557 nipype.workflow INFO:
- [Job 83] Cached (l1analysis.susan).
- 210901-12:29:25,162 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 11 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- 210901-12:29:25,278 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/modelestimate".
- 210901-12:29:25,293 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:25,301 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/modelestimate".
- 210901-12:29:25,312 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/mask/sub-pil007_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:25,317 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:25,337 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/mask/sub-pil006_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:25,347 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/modelestimate".
- 210901-12:29:25,369 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:25,387 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/modelestimate".
- 210901-12:29:25,391 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/mask/sub-pil005_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:25,402 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:25,407 nipype.workflow INFO:
- [Job 43] Cached (l1analysis.feat_spec).
- 210901-12:29:25,422 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/mask/sub-pil004_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:25,436 nipype.workflow INFO:
- [Job 52] Cached (l1analysis.feat_spec).
- 210901-12:29:25,504 nipype.workflow INFO:
- [Job 60] Cached (l1analysis.level1design).
- 210901-12:29:25,559 nipype.workflow INFO:
- [Job 69] Cached (l1analysis.level1design).
- 210901-12:29:25,780 nipype.workflow INFO:
- [Job 77] Cached (l1analysis.l1_spec).
- 210901-12:29:25,794 nipype.workflow INFO:
- [Job 84] Cached (l1analysis.mask).
- 210901-12:29:25,796 nipype.workflow INFO:
- [Job 85] Cached (l1analysis.getsubjectinfo).
- 210901-12:29:27,164 nipype.workflow INFO:
- [MultiProc] Running 4 tasks, and 6 jobs ready. Free memory (GB): 112.20/113.00, Free processors: 10/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:29:27,287 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/modelestimate".
- 210901-12:29:27,301 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:27,320 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/mask/sub-91008_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:27,326 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/modelestimate".
- 210901-12:29:27,340 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:27,354 nipype.workflow INFO:
- [Job 61] Cached (l1analysis.feat_spec).
- 210901-12:29:27,361 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/mask/sub-91004_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:27,374 nipype.workflow INFO:
- [Job 70] Cached (l1analysis.feat_spec).
- 210901-12:29:27,439 nipype.workflow INFO:
- [Job 78] Cached (l1analysis.level1design).
- 210901-12:29:27,459 nipype.workflow INFO:
- [Job 86] Cached (l1analysis.l1_spec).
- 210901-12:29:29,165 nipype.workflow INFO:
- [MultiProc] Running 6 tasks, and 4 jobs ready. Free memory (GB): 111.80/113.00, Free processors: 8/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:29:29,287 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/modelestimate".
- 210901-12:29:29,300 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:29,306 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/modelestimate".
- 210901-12:29:29,321 nipype.workflow INFO:
- [Job 79] Cached (l1analysis.feat_spec).
- 210901-12:29:29,323 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:29,324 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/mask/sub-91003_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:29,343 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/mask/sub-91001_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:29,372 nipype.workflow INFO:
- [Job 87] Cached (l1analysis.level1design).
- 210901-12:29:31,167 nipype.workflow INFO:
- [MultiProc] Running 8 tasks, and 2 jobs ready. Free memory (GB): 111.40/113.00, Free processors: 6/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:29:31,296 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/modelestimate".
- 210901-12:29:31,310 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:31,317 nipype.workflow INFO:
- [Job 88] Cached (l1analysis.feat_spec).
- 210901-12:29:31,328 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/mask/sub-01014_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:33,169 nipype.workflow INFO:
- [MultiProc] Running 9 tasks, and 1 jobs ready. Free memory (GB): 111.20/113.00, Free processors: 5/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:29:33,297 nipype.workflow INFO:
- [Node] Setting-up "l1analysis.modelestimate" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/modelestimate".
- 210901-12:29:33,310 nipype.workflow INFO:
- [Node] Setting-up "_modelestimate0" in "/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/modelestimate/mapflow/_modelestimate0".
- 210901-12:29:33,328 nipype.workflow INFO:
- [Node] Running "_modelestimate0" ("nipype.interfaces.fsl.model.FILMGLS"), a CommandLine Interface with command:
- film_gls --ms=5 --rn=stats --sa --con=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/feat_spec/mapflow/_feat_spec0/run0.con --in=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/mask/sub-01007_ses-1_task-AAT_space-MNI152NLin2009cAsym_desc-preproc_bold_smooth_masked.nii.gz --pd=/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/feat_spec/mapflow/_feat_spec0/run0.mat --thr=1000.000000
- 210901-12:29:35,171 nipype.workflow INFO:
- [MultiProc] Running 10 tasks, and 0 jobs ready. Free memory (GB): 111.00/113.00, Free processors: 4/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:30:36,988 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:36,991 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:37,19 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,21 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/modelestimate)
- 210901-12:30:37,178 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,181 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:37,184 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,186 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/modelestimate)
- 210901-12:30:37,233 nipype.workflow ERROR:
- Node modelestimate.a7 failed to run on host dmp029.
- 210901-12:30:37,234 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123037-hassan.bassam-modelestimate.a7-82bf9cc8-78cd-4b39-94bd-f638cff501d0.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil005.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:37,237 nipype.workflow ERROR:
- Node modelestimate.a5 failed to run on host dmp029.
- 210901-12:30:37,237 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123037-hassan.bassam-modelestimate.a5-be69167c-1492-4c15-8bdc-1e8331c013ef.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91008.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:37,240 nipype.workflow INFO:
- [MultiProc] Running 8 tasks, and 0 jobs ready. Free memory (GB): 111.40/113.00, Free processors: 6/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:30:37,567 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,568 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,569 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:37,570 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:37,572 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,573 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,574 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/modelestimate)
- 210901-12:30:37,575 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/modelestimate)
- 210901-12:30:37,744 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,746 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:37,749 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,751 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/modelestimate)
- 210901-12:30:37,859 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,861 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:37,864 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:37,866 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/modelestimate)
- 210901-12:30:39,235 nipype.workflow ERROR:
- Node modelestimate.a9 failed to run on host dmp029.
- 210901-12:30:39,236 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a9-0d25363b-7789-47e9-9c8a-f94d46bad87c.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil007.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:39,239 nipype.workflow ERROR:
- Node modelestimate.a8 failed to run on host dmp029.
- 210901-12:30:39,239 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a8-a6c0717a-4c25-422a-b733-931bbc442bfe.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil006.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:39,242 nipype.workflow ERROR:
- Node modelestimate.a6 failed to run on host dmp029.
- 210901-12:30:39,242 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a6-2c2361db-4430-4940-95cc-8c744e593963.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-pil004.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:39,245 nipype.workflow ERROR:
- Node modelestimate.a4 failed to run on host dmp029.
- 210901-12:30:39,245 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a4-fc5177ef-9c6a-4a8f-a570-a9c0941d2e1b.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91004.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:39,249 nipype.workflow INFO:
- [MultiProc] Running 4 tasks, and 0 jobs ready. Free memory (GB): 112.20/113.00, Free processors: 10/14.
- Currently running:
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- * l1analysis.modelestimate
- 210901-12:30:39,593 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:39,596 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:39,598 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:39,600 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/modelestimate)
- 210901-12:30:39,700 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:39,702 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:39,705 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:39,707 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/modelestimate)
- 210901-12:30:39,818 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:39,820 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:39,823 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:39,825 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/modelestimate)
- 210901-12:30:41,237 nipype.workflow ERROR:
- Node modelestimate.a3 failed to run on host dmp029.
- 210901-12:30:41,238 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123041-hassan.bassam-modelestimate.a3-cadd5aa5-6683-406f-9c50-0ca6a5f7c88c.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91003.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:41,241 nipype.workflow ERROR:
- Node modelestimate.a2 failed to run on host dmp029.
- 210901-12:30:41,241 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123041-hassan.bassam-modelestimate.a2-4df6059f-2020-4319-8681-50be17f58243.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-91001.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:41,244 nipype.workflow ERROR:
- Node modelestimate.a1 failed to run on host dmp029.
- 210901-12:30:41,244 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123041-hassan.bassam-modelestimate.a1-b4f38651-e23a-4caa-9159-cbc65f450f72.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01014.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:41,247 nipype.workflow INFO:
- [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 112.80/113.00, Free processors: 13/14.
- Currently running:
- * l1analysis.modelestimate
- 210901-12:30:41,588 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:41,590 nipype.workflow WARNING:
- [Node] Error on "_modelestimate0" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/modelestimate/mapflow/_modelestimate0)
- 210901-12:30:41,593 nipype.workflow WARNING:
- Storing result file without outputs
- 210901-12:30:41,595 nipype.workflow WARNING:
- [Node] Error on "l1analysis.modelestimate" (/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/modelestimate)
- 210901-12:30:43,239 nipype.workflow ERROR:
- Node modelestimate.a0 failed to run on host dmp029.
- 210901-12:30:43,240 nipype.workflow ERROR:
- Saving crash info to /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123043-hassan.bassam-modelestimate.a0-08d97173-ead9-4de5-8d4a-d80831cee643.pklz
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node
- result["result"] = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1380, in _run_interface
- result = self._collate_results(
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 1293, in _collate_results
- raise Exception(
- Exception: Subnodes of node: modelestimate failed:
- Subnode 0 failed
- Error: Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 530, in aggregate_outputs
- setattr(outputs, key, val)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate
- value = super(File, self).validate(objekt, name, value, return_pathlike=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate
- self.error(objekt, name, str(value))
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/traits/base_trait_handler.py", line 74, in error
- raise TraitError(
- traits.trait_errors.TraitError: The 'thresholdac' trait of a FILMGLSOutputSpec507 instance must be a pathlike object or string representing an existing file, but a value of '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' <class 'str'> was specified.
- During handling of the above exception, another exception occurred:
- Traceback (most recent call last):
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/utils.py", line 94, in nodelist_runner
- result = node.run(updatehash=updatehash)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run
- result = self._run_interface(execute=True)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface
- return self._run_command(execute)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command
- result = self._interface.run(cwd=outdir)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 430, in run
- outputs = self.aggregate_outputs(runtime)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/interfaces/base/core.py", line 537, in aggregate_outputs
- raise FileNotFoundError(msg)
- FileNotFoundError: No such file or directory '/home/mpg08/hassan.bassam/FS_analysis/output/workingdir/l1analysis/_ses_id_1_subject_task_id_sub-01007.AAT/modelestimate/mapflow/_modelestimate0/stats/threshac1.nii.gz' for output 'thresholdac' of a FILMGLS interface
- 210901-12:30:43,243 nipype.workflow INFO:
- [MultiProc] Running 0 tasks, and 0 jobs ready. Free memory (GB): 113.00/113.00, Free processors: 14/14.
- 210901-12:30:45,240 nipype.workflow INFO:
- ***********************************
- 210901-12:30:45,240 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a7
- 210901-12:30:45,240 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123037-hassan.bassam-modelestimate.a7-82bf9cc8-78cd-4b39-94bd-f638cff501d0.pklz
- 210901-12:30:45,240 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a5
- 210901-12:30:45,240 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123037-hassan.bassam-modelestimate.a5-be69167c-1492-4c15-8bdc-1e8331c013ef.pklz
- 210901-12:30:45,240 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a9
- 210901-12:30:45,240 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a9-0d25363b-7789-47e9-9c8a-f94d46bad87c.pklz
- 210901-12:30:45,240 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a8
- 210901-12:30:45,240 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a8-a6c0717a-4c25-422a-b733-931bbc442bfe.pklz
- 210901-12:30:45,240 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a6
- 210901-12:30:45,240 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a6-2c2361db-4430-4940-95cc-8c744e593963.pklz
- 210901-12:30:45,240 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a4
- 210901-12:30:45,240 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123039-hassan.bassam-modelestimate.a4-fc5177ef-9c6a-4a8f-a570-a9c0941d2e1b.pklz
- 210901-12:30:45,241 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a3
- 210901-12:30:45,241 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123041-hassan.bassam-modelestimate.a3-cadd5aa5-6683-406f-9c50-0ca6a5f7c88c.pklz
- 210901-12:30:45,241 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a2
- 210901-12:30:45,241 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123041-hassan.bassam-modelestimate.a2-4df6059f-2020-4319-8681-50be17f58243.pklz
- 210901-12:30:45,241 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a1
- 210901-12:30:45,241 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123041-hassan.bassam-modelestimate.a1-b4f38651-e23a-4caa-9159-cbc65f450f72.pklz
- 210901-12:30:45,241 nipype.workflow ERROR:
- could not run node: l1analysis.modelestimate.a0
- 210901-12:30:45,241 nipype.workflow INFO:
- crashfile: /home/mpg08/hassan.bassam/FS_analysis/crash-20210901-123043-hassan.bassam-modelestimate.a0-08d97173-ead9-4de5-8d4a-d80831cee643.pklz
- 210901-12:30:45,241 nipype.workflow INFO:
- ***********************************
- Traceback (most recent call last):
- File "FS_analysis_ERT_AAT.py", line 475, in <module>
- l1analysis.run('MultiProc', plugin_args={'n_procs': 14})
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/engine/workflows.py", line 638, in run
- runner.run(execgraph, updatehash=updatehash, config=self.config)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/base.py", line 192, in run
- report_nodes_not_run(notrun)
- File "/home/users/hassan.bassam/.local/lib/python3.8/site-packages/nipype/pipeline/plugins/tools.py", line 96, in report_nodes_not_run
- raise RuntimeError(
- RuntimeError: Workflow did not execute cleanly. Check log for details
- Finished running 1st level analysis on task-AAT
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