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Brahmin.DG kangju (no sintashta right) pass

misnomer001
May 21st, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. inbreed: NO
  9. ## qpAdm version: 1520
  10. seed: 1621420386
  11. inbreed set NO
  12. inbreed set NO
  13.  
  14. left pops:
  15. Brahmin.DG
  16. Iran_ShahrISokhta_BA2
  17. Kazakhstan_Kangju.SG
  18. Irula.DG
  19.  
  20. right pops:
  21. Mbuti.DG
  22. CHG
  23. Mongolia_North_N
  24. Serbia_IronGates_Mesolithic
  25. Iran_GanjDareh_N
  26. EHG
  27. WSHG
  28. Tarim_EMBA1
  29. ONG.SG
  30. Uzbekistan_Bustan_BA
  31.  
  32. codimension 1
  33. f4info:
  34. f4rank: 2 dof: 7 chisq: 12.434 tail: 0.0871687357 dofdiff: 9 chisqdiff: -12.434 taildiff: 1
  35. B:
  36. scale 1.000 1.000
  37. CHG 1.074 0.364
  38. Mongolia_North_N -0.212 -0.277
  39. Serbia_IronGates_Mesolithic 1.475 -1.429
  40. Iran_GanjDareh_N 0.686 1.950
  41. EHG 1.367 -0.910
  42. WSHG 1.100 -0.063
  43. Tarim_EMBA1 0.935 -0.347
  44. ONG.SG -0.741 -0.469
  45. Uzbekistan_Bustan_BA 0.808 1.332
  46. A:
  47. scale 434.932 1423.853
  48. Iran_ShahrISokhta_BA2 0.201 1.409
  49. Kazakhstan_Kangju.SG 1.425 -0.654
  50. Irula.DG -0.964 -0.765
  51.  
  52.  
  53. full rank
  54. f4info:
  55. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 7 chisqdiff: 12.434 taildiff: 0.0871687357
  56. B:
  57. scale 923.852 297.612 445.924
  58. CHG 0.724 0.967 -1.221
  59. Mongolia_North_N 0.164 -0.018 0.556
  60. Serbia_IronGates_Mesolithic -0.493 1.666 -1.032
  61. Iran_GanjDareh_N 2.139 0.416 -1.107
  62. EHG -0.173 1.468 -1.130
  63. WSHG 0.535 1.108 -1.009
  64. Tarim_EMBA1 -0.003 0.934 -0.902
  65. ONG.SG -0.850 -0.694 0.767
  66. Uzbekistan_Bustan_BA 1.611 0.615 -1.101
  67. A:
  68. scale 1.732 1.732 1.732
  69. Iran_ShahrISokhta_BA2 1.732 0.000 0.000
  70. Kazakhstan_Kangju.SG 0.000 1.732 0.000
  71. Irula.DG 0.000 0.000 1.732
  72.  
  73.  
  74. best coefficients: 0.340 0.238 0.422
  75. totmean: 0.340 0.238 0.422
  76. boot mean: 0.340 0.238 0.422
  77. std. errors: 0.046 0.028 0.035
  78.  
  79. error covariance (* 1,000,000)
  80. 2152 -864 -1288
  81. -864 806 58
  82. -1288 58 1229
  83.  
  84.  
  85. summ: Brahmin.DG 3 0.087169 0.340 0.238 0.422 2152 -864 -1288 806 58 ...
  86. 1229
  87.  
  88. fixed pat wt dof chisq tail prob
  89. 000 0 7 12.434 0.0871687 0.340 0.238 0.422
  90. 001 1 8 141.332 1.25387e-26 0.819 0.181 0.000
  91. 010 1 8 78.720 8.84373e-14 0.593 0.000 0.407
  92. 100 1 8 62.846 1.28507e-10 0.000 0.375 0.625
  93. 011 2 9 167.036 0 1.000 0.000 0.000
  94. 101 2 9 570.419 0 0.000 1.000 0.000
  95. 110 2 9 243.894 0 0.000 0.000 1.000
  96. best pat: 000 0.0871687 - -
  97. best pat: 100 1.28507e-10 chi(nested): 50.412 p-value for nested model: 1.2464e-12
  98. best pat: 011 2.55609e-31 not nested
  99.  
  100. coeffs: 0.340 0.238 0.422
  101.  
  102. ## dscore:: f_4(Base, Fit, Rbase, right2)
  103. ## genstat:: f_4(Base, Fit, right1, right2)
  104.  
  105. details: Iran_ShahrISokhta_BA2 CHG 0.000783 2.249934
  106. details: Kazakhstan_Kangju.SG CHG 0.003251 8.818877
  107. details: Irula.DG CHG -0.002739 -7.371678
  108. dscore: CHG f4: -0.000118 Z: -0.391253
  109.  
  110. details: Iran_ShahrISokhta_BA2 Mongolia_North_N 0.000177 0.526339
  111. details: Kazakhstan_Kangju.SG Mongolia_North_N -0.000062 -0.187627
  112. details: Irula.DG Mongolia_North_N 0.001246 3.525003
  113. dscore: Mongolia_North_N f4: 0.000572 Z: 2.023731
  114.  
  115. details: Iran_ShahrISokhta_BA2 Serbia_IronGates_Mesolithic -0.000533 -1.710728
  116. details: Kazakhstan_Kangju.SG Serbia_IronGates_Mesolithic 0.005597 17.349923
  117. details: Irula.DG Serbia_IronGates_Mesolithic -0.002315 -7.142259
  118. dscore: Serbia_IronGates_Mesolithic f4: 0.000172 Z: 0.654534
  119.  
  120. details: Iran_ShahrISokhta_BA2 Iran_GanjDareh_N 0.002315 7.553190
  121. details: Kazakhstan_Kangju.SG Iran_GanjDareh_N 0.001396 4.474246
  122. details: Irula.DG Iran_GanjDareh_N -0.002482 -8.085200
  123. dscore: Iran_GanjDareh_N f4: 0.000070 Z: 0.276664
  124.  
  125. details: Iran_ShahrISokhta_BA2 EHG -0.000187 -0.538725
  126. details: Kazakhstan_Kangju.SG EHG 0.004933 13.305034
  127. details: Irula.DG EHG -0.002533 -7.207568
  128. dscore: EHG f4: 0.000040 Z: 0.136453
  129.  
  130. details: Iran_ShahrISokhta_BA2 WSHG 0.000579 1.522220
  131. details: Kazakhstan_Kangju.SG WSHG 0.003725 9.805059
  132. details: Irula.DG WSHG -0.002263 -6.212956
  133. dscore: WSHG f4: 0.000127 Z: 0.415080
  134.  
  135. details: Iran_ShahrISokhta_BA2 Tarim_EMBA1 -0.000004 -0.009547
  136. details: Kazakhstan_Kangju.SG Tarim_EMBA1 0.003140 8.845146
  137. details: Irula.DG Tarim_EMBA1 -0.002023 -5.601033
  138. dscore: Tarim_EMBA1 f4: -0.000109 Z: -0.363819
  139.  
  140. details: Iran_ShahrISokhta_BA2 ONG.SG -0.000920 -2.809411
  141. details: Kazakhstan_Kangju.SG ONG.SG -0.002330 -7.106722
  142. details: Irula.DG ONG.SG 0.001720 5.086146
  143. dscore: ONG.SG f4: -0.000140 Z: -0.515481
  144.  
  145. details: Iran_ShahrISokhta_BA2 Uzbekistan_Bustan_BA 0.001744 5.652355
  146. details: Kazakhstan_Kangju.SG Uzbekistan_Bustan_BA 0.002067 6.791086
  147. details: Irula.DG Uzbekistan_Bustan_BA -0.002469 -7.979690
  148. dscore: Uzbekistan_Bustan_BA f4: 0.000041 Z: 0.161250
  149.  
  150. gendstat: Mbuti.DG CHG -0.391
  151. gendstat: Mbuti.DG Mongolia_North_N 2.024
  152. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic 0.655
  153. gendstat: Mbuti.DG Iran_GanjDareh_N 0.277
  154. gendstat: Mbuti.DG EHG 0.136
  155. gendstat: Mbuti.DG WSHG 0.415
  156. gendstat: Mbuti.DG Tarim_EMBA1 -0.364
  157. gendstat: Mbuti.DG ONG.SG -0.515
  158. gendstat: Mbuti.DG Uzbekistan_Bustan_BA 0.161
  159. gendstat: CHG Mongolia_North_N 2.173
  160. gendstat: CHG Serbia_IronGates_Mesolithic 1.087
  161. gendstat: CHG Iran_GanjDareh_N 0.722
  162. gendstat: CHG EHG 0.528
  163. gendstat: CHG WSHG 0.739
  164. gendstat: CHG Tarim_EMBA1 0.028
  165. gendstat: CHG ONG.SG -0.068
  166. gendstat: CHG Uzbekistan_Bustan_BA 0.640
  167. gendstat: Mongolia_North_N Serbia_IronGates_Mesolithic -1.489
  168. gendstat: Mongolia_North_N Iran_GanjDareh_N -1.754
  169. gendstat: Mongolia_North_N EHG -1.822
  170. gendstat: Mongolia_North_N WSHG -1.451
  171. gendstat: Mongolia_North_N Tarim_EMBA1 -2.437
  172. gendstat: Mongolia_North_N ONG.SG -2.815
  173. gendstat: Mongolia_North_N Uzbekistan_Bustan_BA -1.927
  174. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N -0.415
  175. gendstat: Serbia_IronGates_Mesolithic EHG -0.620
  176. gendstat: Serbia_IronGates_Mesolithic WSHG -0.168
  177. gendstat: Serbia_IronGates_Mesolithic Tarim_EMBA1 -1.093
  178. gendstat: Serbia_IronGates_Mesolithic ONG.SG -1.081
  179. gendstat: Serbia_IronGates_Mesolithic Uzbekistan_Bustan_BA -0.594
  180. gendstat: Iran_GanjDareh_N EHG -0.108
  181. gendstat: Iran_GanjDareh_N WSHG 0.184
  182. gendstat: Iran_GanjDareh_N Tarim_EMBA1 -0.618
  183. gendstat: Iran_GanjDareh_N ONG.SG -0.732
  184. gendstat: Iran_GanjDareh_N Uzbekistan_Bustan_BA -0.146
  185. gendstat: EHG WSHG 0.327
  186. gendstat: EHG Tarim_EMBA1 -0.613
  187. gendstat: EHG ONG.SG -0.553
  188. gendstat: EHG Uzbekistan_Bustan_BA 0.006
  189. gendstat: WSHG Tarim_EMBA1 -1.007
  190. gendstat: WSHG ONG.SG -0.809
  191. gendstat: WSHG Uzbekistan_Bustan_BA -0.299
  192. gendstat: Tarim_EMBA1 ONG.SG -0.101
  193. gendstat: Tarim_EMBA1 Uzbekistan_Bustan_BA 0.567
  194. gendstat: ONG.SG Uzbekistan_Bustan_BA 0.639
  195.  
  196. ##end of qpAdm: 5.394 seconds cpu 0.811 Mbytes in use
  197.  
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