mtwapa_pl

Pf_ORF1_vs_SYCY1-Q9UQF0

Jan 22nd, 2021 (edited)
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  1. ########################################
  2. # Program: water
  3. # Rundate: Fri 22 Jan 2021 15:40:14
  4. # Commandline: water
  5. # -auto
  6. # -stdout
  7. # -asequence emboss_water-I20210122-154245-0735-49744282-p1m.asequence
  8. # -bsequence emboss_water-I20210122-154245-0735-49744282-p1m.bsequence
  9. # -datafile EBLOSUM62
  10. # -gapopen 10.0
  11. # -gapextend 0.5
  12. # -aformat3 pair
  13. # -sprotein1
  14. # -sprotein2
  15. # Align_format: pair
  16. # Report_file: stdout
  17. ########################################
  18.  
  19. #=======================================
  20. #
  21. # Aligned_sequences: 2
  22. # 1: Pf_ORF1
  23. # 2: SYCY1_HUMAN
  24. # Matrix: EBLOSUM62
  25. # Gap_penalty: 10.0
  26. # Extend_penalty: 0.5
  27. #
  28. # Length: 450
  29. # Identity: 85/450 (18.9%)
  30. # Similarity: 148/450 (32.9%)
  31. # Gaps: 154/450 (34.2%)
  32. # Score: 98.0
  33. #
  34. #
  35. #=======================================
  36.  
  37. Pf_ORF1 631 PTWRVYSTGSNVFQTRA----GCLIGAE---HVNNSY--------ECDIP 665
  38. |::|..|.|:..|.... .|...|. |.|..| .|...
  39. SYCY1_HUMAN 50 PSYRSLSKGTPTFTAHTHMPRNCYHSATLCMHANTHYWTGKMINPSCPGG 99
  40.  
  41. Pf_ORF1 666 IGAGICASYQTQTN-----------SPRRARSVASQ-------------- 690
  42. :|..:|.:|.|||. ..:..:.|.||
  43. SYCY1_HUMAN 100 LGVTVCWTYFTQTGMSDGGGVQDQAREKHVKEVISQLTRVHGTSSPYKGL 149
  44.  
  45. Pf_ORF1 691 ----------------SIIAYTMS----LGAENSVAYSNNSIAIPTNFTI 720
  46. |:...|:: :.|:|. :|..|.:|.||..
  47. SYCY1_HUMAN 150 DLSKLHETLRTHTRLVSLFNTTLTGLHEVSAQNP---TNCWICLPLNFRP 196
  48.  
  49. Pf_ORF1 721 SVTTEILPV----SMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRA 766
  50. .|: :|| :...|.::.|..:.|... |||.:.:.|..|
  51. SYCY1_HUMAN 197 YVS---IPVPEQWNNFSTEINTTSVLVGPLV--SNLEITHTSNLT----- 236
  52.  
  53. Pf_ORF1 767 LTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRS 816
  54. .|:....|....:|..: :.||| :||:..||
  55. SYCY1_HUMAN 237 ----CVKFSNTTYTTNSQCIR-WVTPP---------TQIVCLPS------ 266
  56.  
  57. Pf_ORF1 817 FIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPP--L 864
  58. .:.|...|.|.. ||. .:.:.:|...| ::|| :
  59. SYCY1_HUMAN 267 ---GIFFVCGTSAYR--------CLN--GSSESMCFLSF----LVPPMTI 299
  60.  
  61. Pf_ORF1 865 LTDEMIAQYTSA--------LLAGTITSGWTFGAGAALQIPFAMQMAYRF 906
  62. .|::.:..|..: :|...|.:|.....|..:
  63. SYCY1_HUMAN 300 YTEQDLYSYVISKPRNKRVPILPFVIGAGVLGALGTGI------------ 337
  64.  
  65. Pf_ORF1 907 NGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNA 956
  66. .||..:....|: ::.:.|..:.::.|||.:....|..|..||.||.
  67. SYCY1_HUMAN 338 GGITTSTQFYYK----LSQELNGDMERVADSLVTLQDQLNSLAAVVLQNR 383
  68.  
  69. Pf_ORF1 957 QALNTLVKQLS--------------SNFGAISSVLNDILSRLDPPEAEVQ 992
  70. :||:.|..:.. :..|.::..:.:|..|:.....|::
  71. SYCY1_HUMAN 384 RALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAEELR 433
  72.  
  73.  
  74. #---------------------------------------
  75. #---------------------------------------
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