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  1. OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed in 8.0
  2. 04-Dec-2017 10:39:46.946 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server version: Apache Tomcat/8.5.16
  3. 04-Dec-2017 10:39:46.950 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server built: Jun 21 2017 17:01:09 UTC
  4. 04-Dec-2017 10:39:46.950 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Server number: 8.5.16.0
  5. 04-Dec-2017 10:39:46.950 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Name: Linux
  6. 04-Dec-2017 10:39:46.951 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log OS Version: 4.10.0-40-generic
  7. 04-Dec-2017 10:39:46.951 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Architecture: amd64
  8. 04-Dec-2017 10:39:46.951 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Java Home: /usr/lib/jvm/java-8-openjdk-amd64/jre
  9. 04-Dec-2017 10:39:46.952 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Version: 1.8.0_151-8u151-b12-0ubuntu0.16.04.2-b12
  10. 04-Dec-2017 10:39:46.952 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log JVM Vendor: Oracle Corporation
  11. 04-Dec-2017 10:39:46.952 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_BASE: /opt/tomcat
  12. 04-Dec-2017 10:39:46.952 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log CATALINA_HOME: /opt/tomcat
  13. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.config.file=/opt/tomcat/conf/logging.properties
  14. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
  15. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djdk.tls.ephemeralDHKeySize=2048
  16. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.protocol.handler.pkgs=org.apache.catalina.webresources
  17. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Xms1024m
  18. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Xmx8192m
  19. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -XX:MaxPermSize=512m
  20. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.base=/opt/tomcat
  21. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Dcatalina.home=/opt/tomcat
  22. 04-Dec-2017 10:39:46.953 INFO [main] org.apache.catalina.startup.VersionLoggerListener.log Command line argument: -Djava.io.tmpdir=/opt/tomcat/temp
  23. 04-Dec-2017 10:39:46.954 INFO [main] org.apache.catalina.core.AprLifecycleListener.lifecycleEvent The APR based Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: [/usr/java/packages/lib/amd64:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib]
  24. 04-Dec-2017 10:39:47.045 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["http-nio-8080"]
  25. 04-Dec-2017 10:39:47.068 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
  26. 04-Dec-2017 10:39:47.071 INFO [main] org.apache.coyote.AbstractProtocol.init Initializing ProtocolHandler ["ajp-nio-8009"]
  27. 04-Dec-2017 10:39:47.073 INFO [main] org.apache.tomcat.util.net.NioSelectorPool.getSharedSelector Using a shared selector for servlet write/read
  28. 04-Dec-2017 10:39:47.075 INFO [main] org.apache.catalina.startup.Catalina.load Initialization processed in 582 ms
  29. 04-Dec-2017 10:39:47.107 INFO [main] org.apache.catalina.core.StandardService.startInternal Starting service [Catalina]
  30. 04-Dec-2017 10:39:47.107 INFO [main] org.apache.catalina.core.StandardEngine.startInternal Starting Servlet Engine: Apache Tomcat/8.5.16
  31. 04-Dec-2017 10:39:47.172 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployWAR Deploying web application archive [/opt/tomcat/webapps/openmrs.war]
  32. 04-Dec-2017 10:39:47.194 WARNING [localhost-startStop-1] org.apache.catalina.startup.SetContextPropertiesRule.begin [SetContextPropertiesRule]{Context} Setting property 'antiJARLocking' to 'true' did not find a matching property.
  33. 04-Dec-2017 10:39:52.034 INFO [localhost-startStop-1] org.apache.jasper.servlet.TldScanner.scanJars At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
  34. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2113) |2017-12-04 10:39:52,394| Unable to find a runtime properties file at /home/nthc/openmrs-runtime.properties
  35. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2113) |2017-12-04 10:39:52,407| Unable to find a runtime properties file at /home/nthc/openmrs-runtime.properties
  36. INFO - Listener.contextInitialized(174) |2017-12-04 10:39:52,408| Using runtime properties file: /root/.OpenMRS/openmrs-runtime.properties
  37. INFO 12/4/17 10:39 AM:liquibase: Reading from `liquibasechangelog`
  38. WARNING 12/4/17 10:39 AM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  39. WARNING 12/4/17 10:39 AM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  40. WARNING 12/4/17 10:39 AM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  41. WARN - SimpleUrlHandlerMapping.registerHandlers(115) |2017-12-04 10:40:04,838| Neither 'urlMap' nor 'mappings' set on SimpleUrlHandlerMapping
  42. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2113) |2017-12-04 10:40:05,058| Unable to find a runtime properties file at /home/nthc/openmrs-runtime.properties
  43. INFO 12/4/17 10:40 AM:liquibase: Reading from `liquibasechangelog`
  44. WARNING 12/4/17 10:40 AM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  45. WARNING 12/4/17 10:40 AM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  46. WARNING 12/4/17 10:40 AM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  47. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:08,615| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: chitscore.started value: true,
  48. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:08,650| Exiting method saveGlobalProperty
  49. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:08,658| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: chitscore.mandatory value: false,
  50. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:08,666| Exiting method saveGlobalProperty
  51. INFO 12/4/17 10:40 AM:liquibase: liquibase.xml is using schema version 1.9 rather than version 2.0
  52. INFO 12/4/17 10:40 AM:liquibase: Reading from `liquibasechangelog`
  53. INFO 12/4/17 10:40 AM:liquibase: Successfully acquired change log lock
  54. INFO 12/4/17 10:40 AM:liquibase: liquibase.xml is using schema version 1.9 rather than version 2.0
  55. INFO 12/4/17 10:40 AM:liquibase: Successfully released change log lock
  56. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:11,394| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: familyplanning.started value: true,
  57. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:11,411| Exiting method saveGlobalProperty
  58. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:11,416| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: familyplanning.mandatory value: false,
  59. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:11,426| Exiting method saveGlobalProperty
  60. WARN - Module.expandExtensionNames(546) |2017-12-04 10:40:11,521| webservices.rest: Unable to find class definition for extension: org.openmrs.admin.list
  61. java.lang.NoClassDefFoundError: org/openmrs/module/web/extension/AdministrationSectionExt
  62. at java.lang.ClassLoader.defineClass1(Native Method)
  63. at java.lang.ClassLoader.defineClass(ClassLoader.java:763)
  64. at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
  65. at java.net.URLClassLoader.defineClass(URLClassLoader.java:467)
  66. at java.net.URLClassLoader.access$100(URLClassLoader.java:73)
  67. at java.net.URLClassLoader$1.run(URLClassLoader.java:368)
  68. at java.net.URLClassLoader$1.run(URLClassLoader.java:362)
  69. at java.security.AccessController.doPrivileged(Native Method)
  70. at java.net.URLClassLoader.findClass(URLClassLoader.java:361)
  71. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:637)
  72. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:556)
  73. at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
  74. at org.openmrs.module.Module.expandExtensionNames(Module.java:538)
  75. at org.openmrs.module.Module.getExtensions(Module.java:490)
  76. at org.openmrs.module.ModuleFactory.startModuleInternal(ModuleFactory.java:664)
  77. at org.openmrs.api.context.Daemon$1.run(Daemon.java:74)
  78. Caused by: java.lang.ClassNotFoundException: org.openmrs.module.web.extension.AdministrationSectionExt
  79. at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1285)
  80. at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119)
  81. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:563)
  82. at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
  83. ... 16 more
  84. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:11,539| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: webservices.rest.started value: true,
  85. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:11,545| Exiting method saveGlobalProperty
  86. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:11,551| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: webservices.rest.mandatory value: false,
  87. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:11,562| Exiting method saveGlobalProperty
  88. WARN - Module.expandExtensionNames(546) |2017-12-04 10:40:11,988| owa: Unable to find class definition for extension: org.openmrs.admin.list
  89. java.lang.NoClassDefFoundError: org/openmrs/module/web/extension/AdministrationSectionExt
  90. at java.lang.ClassLoader.defineClass1(Native Method)
  91. at java.lang.ClassLoader.defineClass(ClassLoader.java:763)
  92. at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
  93. at java.net.URLClassLoader.defineClass(URLClassLoader.java:467)
  94. at java.net.URLClassLoader.access$100(URLClassLoader.java:73)
  95. at java.net.URLClassLoader$1.run(URLClassLoader.java:368)
  96. at java.net.URLClassLoader$1.run(URLClassLoader.java:362)
  97. at java.security.AccessController.doPrivileged(Native Method)
  98. at java.net.URLClassLoader.findClass(URLClassLoader.java:361)
  99. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:637)
  100. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:556)
  101. at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
  102. at org.openmrs.module.Module.expandExtensionNames(Module.java:538)
  103. at org.openmrs.module.Module.getExtensions(Module.java:490)
  104. at org.openmrs.module.ModuleFactory.startModuleInternal(ModuleFactory.java:664)
  105. at org.openmrs.api.context.Daemon$1.run(Daemon.java:74)
  106. Caused by: java.lang.ClassNotFoundException: org.openmrs.module.web.extension.AdministrationSectionExt
  107. at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1285)
  108. at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119)
  109. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:563)
  110. at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
  111. ... 16 more
  112. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:11,997| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: owa.started value: true,
  113. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:12,001| Exiting method saveGlobalProperty
  114. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:12,005| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: owa.mandatory value: false,
  115. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:12,021| Exiting method saveGlobalProperty
  116. WARN - Module.expandExtensionNames(546) |2017-12-04 10:40:12,607| fhir: Unable to find class definition for extension: org.openmrs.admin.list
  117. java.lang.NoClassDefFoundError: org/openmrs/module/web/extension/AdministrationSectionExt
  118. at java.lang.ClassLoader.defineClass1(Native Method)
  119. at java.lang.ClassLoader.defineClass(ClassLoader.java:763)
  120. at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
  121. at java.net.URLClassLoader.defineClass(URLClassLoader.java:467)
  122. at java.net.URLClassLoader.access$100(URLClassLoader.java:73)
  123. at java.net.URLClassLoader$1.run(URLClassLoader.java:368)
  124. at java.net.URLClassLoader$1.run(URLClassLoader.java:362)
  125. at java.security.AccessController.doPrivileged(Native Method)
  126. at java.net.URLClassLoader.findClass(URLClassLoader.java:361)
  127. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:637)
  128. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:556)
  129. at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
  130. at org.openmrs.module.Module.expandExtensionNames(Module.java:538)
  131. at org.openmrs.module.Module.getExtensions(Module.java:490)
  132. at org.openmrs.module.ModuleFactory.startModuleInternal(ModuleFactory.java:664)
  133. at org.openmrs.api.context.Daemon$1.run(Daemon.java:74)
  134. Caused by: java.lang.ClassNotFoundException: org.openmrs.module.web.extension.AdministrationSectionExt
  135. at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1285)
  136. at org.apache.catalina.loader.WebappClassLoaderBase.loadClass(WebappClassLoaderBase.java:1119)
  137. at org.openmrs.module.ModuleClassLoader.loadClass(ModuleClassLoader.java:563)
  138. at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
  139. ... 16 more
  140. INFO 12/4/17 10:40 AM:liquibase: liquibase.xml is using schema version 1.9 rather than version 2.0
  141. INFO 12/4/17 10:40 AM:liquibase: Reading from `liquibasechangelog`
  142. INFO 12/4/17 10:40 AM:liquibase: Successfully acquired change log lock
  143. INFO 12/4/17 10:40 AM:liquibase: liquibase.xml is using schema version 1.9 rather than version 2.0
  144. INFO 12/4/17 10:40 AM:liquibase: Successfully released change log lock
  145. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:13,846| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: fhir.started value: true,
  146. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:13,857| Exiting method saveGlobalProperty
  147. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:13,861| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: fhir.mandatory value: false,
  148. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:13,870| Exiting method saveGlobalProperty
  149. INFO - LoggingAdvice.invoke(115) |2017-12-04 10:40:14,483| In method SchedulerService.saveToMemento. Arguments:
  150. INFO - LoggingAdvice.invoke(155) |2017-12-04 10:40:14,494| Exiting method saveToMemento
  151. INFO - ServiceContext.startRefreshingContext(816) |2017-12-04 10:40:14,553| Refreshing Context
  152. WARN - SimpleUrlHandlerMapping.registerHandlers(115) |2017-12-04 10:40:29,817| Neither 'urlMap' nor 'mappings' set on SimpleUrlHandlerMapping
  153. WARN - SimpleUrlHandlerMapping.registerHandlers(115) |2017-12-04 10:40:30,931| Neither 'urlMap' nor 'mappings' set on SimpleUrlHandlerMapping
  154. INFO - ServiceContext.doneRefreshingContext(827) |2017-12-04 10:40:30,939| Done refreshing Context
  155. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2113) |2017-12-04 10:40:35,113| Unable to find a runtime properties file at /home/nthc/openmrs-runtime.properties
  156. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2113) |2017-12-04 10:40:35,292| Unable to find a runtime properties file at /home/nthc/openmrs-runtime.properties
  157. 04-Dec-2017 10:40:35.332 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployWAR Deployment of web application archive [/opt/tomcat/webapps/openmrs.war] has finished in [48,157] ms
  158. 04-Dec-2017 10:40:35.333 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/opt/tomcat/webapps/docs]
  159. 04-Dec-2017 10:40:35.351 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/opt/tomcat/webapps/docs] has finished in [18] ms
  160. 04-Dec-2017 10:40:35.351 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/opt/tomcat/webapps/examples]
  161. 04-Dec-2017 10:40:35.548 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/opt/tomcat/webapps/examples] has finished in [197] ms
  162. 04-Dec-2017 10:40:35.548 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/opt/tomcat/webapps/host-manager]
  163. 04-Dec-2017 10:40:35.586 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/opt/tomcat/webapps/host-manager] has finished in [38] ms
  164. 04-Dec-2017 10:40:35.587 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/opt/tomcat/webapps/ROOT]
  165. 04-Dec-2017 10:40:35.605 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/opt/tomcat/webapps/ROOT] has finished in [19] ms
  166. 04-Dec-2017 10:40:35.605 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deploying web application directory [/opt/tomcat/webapps/manager]
  167. 04-Dec-2017 10:40:35.628 INFO [localhost-startStop-1] org.apache.catalina.startup.HostConfig.deployDirectory Deployment of web application directory [/opt/tomcat/webapps/manager] has finished in [23] ms
  168. 04-Dec-2017 10:40:35.636 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["http-nio-8080"]
  169. 04-Dec-2017 10:40:35.654 INFO [main] org.apache.coyote.AbstractProtocol.start Starting ProtocolHandler ["ajp-nio-8009"]
  170. 04-Dec-2017 10:40:35.661 INFO [main] org.apache.catalina.startup.Catalina.start Server startup in 48585 ms
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