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- allsnps: YES
- ## qpAdm version: 1000
- seed: 1782118943
- read 1073741824 bytes
- read 2146675633 bytes
- packed geno read OK
- end of inpack
- left pops:
- Russia_Khvalynsk_Eneolithic
- EEHG
- Georgia_Kotias.SG
- Geoksyur_EN
- right pops:
- Cameroon_SMA.DG
- Czech_Vestonice16
- Russia_Kostenki14
- Italy_North_Villabruna_HG
- Russia_MA1_HG.SG
- Iberia_ElMiron
- Morocco_Iberomaurusian
- Anatolia_Epipaleolithic
- Iran_GanjDareh_N
- Georgia_Satsurblia.SG
- Boisman_MN
- ONG.SG
- 0 Russia_Khvalynsk_Eneolithic 3
- 1 EEHG 5
- 2 Georgia_Kotias.SG 1
- 3 Geoksyur_EN 21
- 4 Cameroon_SMA.DG 1
- 5 Czech_Vestonice16 1
- 6 Russia_Kostenki14 1
- 7 Italy_North_Villabruna_HG 1
- 8 Russia_MA1_HG.SG 1
- 9 Iberia_ElMiron 1
- 10 Morocco_Iberomaurusian 6
- 11 Anatolia_Epipaleolithic 1
- 12 Iran_GanjDareh_N 8
- 13 Georgia_Satsurblia.SG 1
- 14 Boisman_MN 12
- 15 ONG.SG 6
- jackknife block size: 0.050
- snps: 1150508 indivs: 70
- number of blocks for block jackknife: 713
- ## ncols: 1150508
- coverage: Russia_Khvalynsk_Eneolithic 758497
- coverage: EEHG 1052093
- coverage: Georgia_Kotias.SG 1149097
- coverage: Geoksyur_EN 1020133
- coverage: Cameroon_SMA.DG 1140138
- coverage: Czech_Vestonice16 732091
- coverage: Russia_Kostenki14 1068326
- coverage: Italy_North_Villabruna_HG 883779
- coverage: Russia_MA1_HG.SG 805960
- coverage: Iberia_ElMiron 626974
- coverage: Morocco_Iberomaurusian 1101342
- coverage: Anatolia_Epipaleolithic 848431
- coverage: Iran_GanjDareh_N 1057358
- coverage: Georgia_Satsurblia.SG 801311
- coverage: Boisman_MN 1031750
- coverage: ONG.SG 1143397
- dof (jackknife): 615.293
- numsnps used: 1150508
- codimension 1
- f4info:
- f4rank: 2 dof: 9 chisq: 14.178 tail: 0.116146475 dofdiff: 11 chisqdiff: -14.178 taildiff: 1
- B:
- scale 1.000 1.000
- Czech_Vestonice16 0.871 0.352
- Russia_Kostenki14 0.752 0.245
- Italy_North_Villabruna_HG 1.739 0.767
- Russia_MA1_HG.SG 1.688 0.130
- Iberia_ElMiron 1.057 0.505
- Morocco_Iberomaurusian 0.226 0.217
- Anatolia_Epipaleolithic 0.285 0.382
- Iran_GanjDareh_N -0.937 -1.170
- Georgia_Satsurblia.SG -1.071 2.890
- Boisman_MN 0.602 -0.125
- ONG.SG 0.407 0.160
- A:
- scale 372.027 1415.971
- EEHG 0.316 0.064
- Georgia_Kotias.SG -1.281 1.357
- Geoksyur_EN -1.122 -1.075
- full rank
- f4info:
- f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 9 chisqdiff: 14.178 taildiff: 0.116146475
- B:
- scale 1225.545 281.058 310.109
- Czech_Vestonice16 0.894 -0.760 -0.903
- Russia_Kostenki14 1.240 -0.552 -0.674
- Italy_North_Villabruna_HG 1.156 -1.582 -1.922
- Russia_MA1_HG.SG 1.422 -1.657 -1.669
- Iberia_ElMiron 1.056 -0.884 -1.106
- Morocco_Iberomaurusian -0.498 -0.274 -0.382
- Anatolia_Epipaleolithic 0.338 -0.167 -0.366
- Iran_GanjDareh_N -1.435 0.540 1.084
- Georgia_Satsurblia.SG -1.209 1.778 0.276
- Boisman_MN 0.531 -0.608 -0.539
- ONG.SG 0.152 -0.403 -0.457
- A:
- scale 1.732 1.732 1.732
- EEHG 1.732 0.000 0.000
- Georgia_Kotias.SG 0.000 1.732 0.000
- Geoksyur_EN 0.000 0.000 1.732
- best coefficients: 0.789 0.073 0.139
- Jackknife mean: 0.788385363 0.072880883 0.138733755
- std. errors: 0.020 0.039 0.041
- error covariance (* 1,000,000)
- 407 -147 -261
- -147 1541 -1394
- -261 -1394 1655
- summ: Russia_Khvalynsk_Eneolithic 3 0.116146 0.788 0.073 0.139 407 -147 -261 1541 -1394 ...
- 1655
- fixed pat wt dof chisq tail prob
- 000 0 9 14.178 0.116146 0.789 0.073 0.139
- 001 1 10 25.586 0.00433904 0.811 0.189 0.000
- 010 1 10 17.564 0.0627736 0.796 0.000 0.204
- 100 1 10 340.798 0 0.000 8.115 -7.115 infeasible
- 011 2 11 105.755 1.2859e-17 1.000 0.000 0.000
- 101 2 11 705.055 0 0.000 1.000 0.000
- 110 2 11 1170.847 0 0.000 0.000 1.000
- best pat: 000 0.116146 - -
- best pat: 010 0.0627736 chi(nested): 3.387 p-value for nested model: 0.0657247
- best pat: 011 1.2859e-17 chi(nested): 88.191 p-value for nested model: 5.94269e-21
- coeffs: 0.789 0.073 0.139
- ## dscore:: f_4(Base, Fit, Rbase, right2)
- ## genstat:: f_4(Base, Fit, right1, right2)
- details: EEHG Czech_Vestonice16 0.000729 2.244153
- details: Georgia_Kotias.SG Czech_Vestonice16 -0.002705 -5.964590
- details: Geoksyur_EN Czech_Vestonice16 -0.002910 -8.652442
- dscore: Czech_Vestonice16 f4: -0.000025 Z: -0.083838
- details: EEHG Russia_Kostenki14 0.001012 2.881002
- details: Georgia_Kotias.SG Russia_Kostenki14 -0.001963 -4.053761
- details: Geoksyur_EN Russia_Kostenki14 -0.002173 -6.418280
- dscore: Russia_Kostenki14 f4: 0.000354 Z: 1.096608
- details: EEHG Italy_North_Villabruna_HG 0.000943 2.580744
- details: Georgia_Kotias.SG Italy_North_Villabruna_HG -0.005630 -11.358599
- details: Geoksyur_EN Italy_North_Villabruna_HG -0.006197 -17.849125
- dscore: Italy_North_Villabruna_HG f4: -0.000525 Z: -1.567322
- details: EEHG Russia_MA1_HG.SG 0.001161 3.429242
- details: Georgia_Kotias.SG Russia_MA1_HG.SG -0.005895 -13.031764
- details: Geoksyur_EN Russia_MA1_HG.SG -0.005380 -15.672140
- dscore: Russia_MA1_HG.SG f4: -0.000260 Z: -0.834870
- details: EEHG Iberia_ElMiron 0.000862 2.831658
- details: Georgia_Kotias.SG Iberia_ElMiron -0.003145 -7.458257
- details: Geoksyur_EN Iberia_ElMiron -0.003566 -11.108357
- dscore: Iberia_ElMiron f4: -0.000044 Z: -0.156283
- details: EEHG Morocco_Iberomaurusian -0.000406 -1.435937
- details: Georgia_Kotias.SG Morocco_Iberomaurusian -0.000974 -2.701846
- details: Geoksyur_EN Morocco_Iberomaurusian -0.001233 -4.714831
- dscore: Morocco_Iberomaurusian f4: -0.000562 Z: -2.178729
- details: EEHG Anatolia_Epipaleolithic 0.000276 0.842027
- details: Georgia_Kotias.SG Anatolia_Epipaleolithic -0.000593 -1.322221
- details: Geoksyur_EN Anatolia_Epipaleolithic -0.001181 -3.450228
- dscore: Anatolia_Epipaleolithic f4: 0.000010 Z: 0.033746
- details: EEHG Iran_GanjDareh_N -0.001171 -4.296161
- details: Georgia_Kotias.SG Iran_GanjDareh_N 0.001923 5.191188
- details: Geoksyur_EN Iran_GanjDareh_N 0.003495 12.586217
- dscore: Iran_GanjDareh_N f4: -0.000298 Z: -1.187743
- details: EEHG Georgia_Satsurblia.SG -0.000987 -3.194031
- details: Georgia_Kotias.SG Georgia_Satsurblia.SG 0.006326 13.516286
- details: Geoksyur_EN Georgia_Satsurblia.SG 0.000891 2.644566
- dscore: Georgia_Satsurblia.SG f4: -0.000194 Z: -0.672709
- details: EEHG Boisman_MN 0.000434 1.512123
- details: Georgia_Kotias.SG Boisman_MN -0.002162 -5.310130
- details: Geoksyur_EN Boisman_MN -0.001739 -6.048982
- dscore: Boisman_MN f4: -0.000057 Z: -0.212264
- details: EEHG ONG.SG 0.000124 0.435303
- details: Georgia_Kotias.SG ONG.SG -0.001432 -3.535485
- details: Geoksyur_EN ONG.SG -0.001474 -5.245730
- dscore: ONG.SG f4: -0.000211 Z: -0.802391
- gendstat: Cameroon_SMA.DG Czech_Vestonice16 -0.084
- gendstat: Cameroon_SMA.DG Russia_Kostenki14 1.097
- gendstat: Cameroon_SMA.DG Italy_North_Villabruna_HG -1.567
- gendstat: Cameroon_SMA.DG Russia_MA1_HG.SG -0.835
- gendstat: Cameroon_SMA.DG Iberia_ElMiron -0.156
- gendstat: Cameroon_SMA.DG Morocco_Iberomaurusian -2.179
- gendstat: Cameroon_SMA.DG Anatolia_Epipaleolithic 0.034
- gendstat: Cameroon_SMA.DG Iran_GanjDareh_N -1.188
- gendstat: Cameroon_SMA.DG Georgia_Satsurblia.SG -0.673
- gendstat: Cameroon_SMA.DG Boisman_MN -0.212
- gendstat: Cameroon_SMA.DG ONG.SG -0.802
- gendstat: Czech_Vestonice16 Russia_Kostenki14 1.113
- gendstat: Czech_Vestonice16 Italy_North_Villabruna_HG -1.374
- gendstat: Czech_Vestonice16 Russia_MA1_HG.SG -0.620
- gendstat: Czech_Vestonice16 Iberia_ElMiron -0.055
- gendstat: Czech_Vestonice16 Morocco_Iberomaurusian -1.694
- gendstat: Czech_Vestonice16 Anatolia_Epipaleolithic 0.102
- gendstat: Czech_Vestonice16 Iran_GanjDareh_N -0.870
- gendstat: Czech_Vestonice16 Georgia_Satsurblia.SG -0.487
- gendstat: Czech_Vestonice16 Boisman_MN -0.100
- gendstat: Czech_Vestonice16 ONG.SG -0.586
- gendstat: Russia_Kostenki14 Italy_North_Villabruna_HG -2.404
- gendstat: Russia_Kostenki14 Russia_MA1_HG.SG -1.685
- gendstat: Russia_Kostenki14 Iberia_ElMiron -1.171
- gendstat: Russia_Kostenki14 Morocco_Iberomaurusian -2.932
- gendstat: Russia_Kostenki14 Anatolia_Epipaleolithic -1.002
- gendstat: Russia_Kostenki14 Iran_GanjDareh_N -2.171
- gendstat: Russia_Kostenki14 Georgia_Satsurblia.SG -1.548
- gendstat: Russia_Kostenki14 Boisman_MN -1.364
- gendstat: Russia_Kostenki14 ONG.SG -1.807
- gendstat: Italy_North_Villabruna_HG Russia_MA1_HG.SG 0.674
- gendstat: Italy_North_Villabruna_HG Iberia_ElMiron 1.425
- gendstat: Italy_North_Villabruna_HG Morocco_Iberomaurusian -0.107
- gendstat: Italy_North_Villabruna_HG Anatolia_Epipaleolithic 1.440
- gendstat: Italy_North_Villabruna_HG Iran_GanjDareh_N 0.703
- gendstat: Italy_North_Villabruna_HG Georgia_Satsurblia.SG 0.876
- gendstat: Italy_North_Villabruna_HG Boisman_MN 1.421
- gendstat: Italy_North_Villabruna_HG ONG.SG 0.965
- gendstat: Russia_MA1_HG.SG Iberia_ElMiron 0.603
- gendstat: Russia_MA1_HG.SG Morocco_Iberomaurusian -0.907
- gendstat: Russia_MA1_HG.SG Anatolia_Epipaleolithic 0.733
- gendstat: Russia_MA1_HG.SG Iran_GanjDareh_N -0.124
- gendstat: Russia_MA1_HG.SG Georgia_Satsurblia.SG 0.183
- gendstat: Russia_MA1_HG.SG Boisman_MN 0.639
- gendstat: Russia_MA1_HG.SG ONG.SG 0.155
- gendstat: Iberia_ElMiron Morocco_Iberomaurusian -1.636
- gendstat: Iberia_ElMiron Anatolia_Epipaleolithic 0.165
- gendstat: Iberia_ElMiron Iran_GanjDareh_N -0.877
- gendstat: Iberia_ElMiron Georgia_Satsurblia.SG -0.420
- gendstat: Iberia_ElMiron Boisman_MN -0.042
- gendstat: Iberia_ElMiron ONG.SG -0.551
- gendstat: Morocco_Iberomaurusian Anatolia_Epipaleolithic 1.869
- gendstat: Morocco_Iberomaurusian Iran_GanjDareh_N 1.070
- gendstat: Morocco_Iberomaurusian Georgia_Satsurblia.SG 1.223
- gendstat: Morocco_Iberomaurusian Boisman_MN 1.917
- gendstat: Morocco_Iberomaurusian ONG.SG 1.340
- gendstat: Anatolia_Epipaleolithic Iran_GanjDareh_N -1.056
- gendstat: Anatolia_Epipaleolithic Georgia_Satsurblia.SG -0.612
- gendstat: Anatolia_Epipaleolithic Boisman_MN -0.222
- gendstat: Anatolia_Epipaleolithic ONG.SG -0.738
- gendstat: Iran_GanjDareh_N Georgia_Satsurblia.SG 0.381
- gendstat: Iran_GanjDareh_N Boisman_MN 1.002
- gendstat: Iran_GanjDareh_N ONG.SG 0.369
- gendstat: Georgia_Satsurblia.SG Boisman_MN 0.464
- gendstat: Georgia_Satsurblia.SG ONG.SG -0.056
- gendstat: Boisman_MN ONG.SG -0.724
- ##end of qpAdm: 368.585 seconds cpu 1349.874 Mbytes in use
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