Not correct script to extract structure from G09 log file

#!/usr/bin/env python
# python Extract_Optimized_From_Gaussian.py filename

from __future__ import print_function
import sys, os

def extract_all(text, target):
    linenums = []
    # Start count at 1 because files start at line 1 not 0
    count = 1
    for line in text:
        if (line.find(target)) > -1:
            linenums.append(count)
        count += 1
    return linenums

code = {"1" : "H", "2" : "He", "3" : "Li", "4" : "Be", "5" : "B", \
"6"  : "C", "7"  : "N", "8"  : "O", "9" : "F", "10" : "Ne", \
"11" : "Na" , "12" : "Mg" , "13" : "Al" , "14" : "Si" , "15" : "P", \
"16" : "S"  , "17" : "Cl" , "18" : "Ar" , "19" : "K"  , "20" : "Ca", \
"21" : "Sc" , "22" : "Ti" , "23" : "V"  , "24" : "Cr" , "25" : "Mn", \
"26" : "Fe" , "27" : "Co" , "28" : "Ni" , "29" : "Cu" , "30" : "Zn", \
"31" : "Ga" , "32" : "Ge" , "33" : "As" , "34" : "Se" , "35" : "Br", \
"36" : "Kr" , "37" : "Rb" , "38" : "Sr" , "39" : "Y"  , "40" : "Zr", \
"41" : "Nb" , "42" : "Mo" , "43" : "Tc" , "44" : "Ru" , "45" : "Rh", \
"46" : "Pd" , "47" : "Ag" , "48" : "Cd" , "49" : "In" , "50" : "Sn", \
"51" : "Sb" , "52" : "Te" , "53" : "I"  , "54" : "Xe" , "55" : "Cs", \
"56" : "Ba" , "57" : "La" , "58" : "Ce" , "59" : "Pr" , "60" : "Nd", \
"61" : "Pm" , "62" : "Sm" , "63" : "Eu" , "64" : "Gd" , "65" : "Tb", \
"66" : "Dy" , "67" : "Ho" , "68" : "Er" , "69" : "Tm" , "70" : "Yb", \
"71" : "Lu" , "72" : "Hf" , "73" : "Ta" , "74" : "W"  , "75" : "Re", \
"76" : "Os" , "77" : "Ir" , "78" : "Pt" , "79" : "Au" , "80" : "Hg", \
"81" : "Tl" , "82" : "Pb" , "83" : "Bi" , "84" : "Po" , "85" : "At", \
"86" : "Rn" , "87" : "Fr" , "88" : "Ra" , "89" : "Ac" , "90" : "Th", \
"91" : "Pa" , "92" : "U"  , "93" : "Np" , "94" : "Pu" , "95" : "Am", \
"96" : "Cm" , "97" : "Bk" , "98" : "Cf" , "99" : "Es" ,"100" : "Fm", \
"101": "Md" ,"102" : "No" ,"103" : "Lr" ,"104" : "Rf" ,"105" : "Db", \
"106": "Sg" ,"107" : "Bh" ,"108" : "Hs" ,"109" : "Mt" ,"110" : "Ds", \
"111": "Rg" ,"112" : "Uub","113" : "Uut","114" : "Uuq","115" : "Uup", \
"116": "Uuh","117" : "Uus","118" : "Uuo"}

logfile_fn = os.path.basename(sys.argv[1])
logfile_bn = os.path.splitext(logfile_fn)[0]
logfile_fh = open(logfile_fn, 'r')
text = logfile_fh.readlines()
logfile_fh.close()

# Find all lines that contain "!   Optimized Parameters   !"
opt_param_line_nums = extract_all(text, '!   Optimized Parameters   !')
# Then find all lines that have "Input orientation:"
input_orient_line_nums = extract_all(text, 'Input orientation')
# And all lines that have the ---- which we will use to find the ends of the coordinate sections
end_coor_line_nums = extract_all(text, '---------')
# Add 5 because the first actual coordinate is +5 lines
input_orient_line_nums = [x+5 for x in input_orient_line_nums]
# Make sure they're sorted
opt_param_line_nums.sort()
input_orient_line_nums.sort()
end_coor_line_nums.sort()

# Now we find the "Input Orientation" that come after "!   Optimized Parameters   !"
new_input_lns = []
count = 0
for x in input_orient_line_nums:
    if x > opt_param_line_nums[count]:
        new_input_lns.append(x)
        count += 1

new_end_lns = []
count = 0
for x in end_coor_line_nums:
    if count > len(new_input_lns)-1:
        break
    if x > new_input_lns[count]:
        new_end_lns.append(x)
        count += 1

intervals = zip(new_input_lns, new_end_lns)

# Now we convert each interval into a .xyz
outfile = open(logfile_bn+'.xyz','w')
for intvl in intervals:
    n_atoms = intvl[1] - intvl[0]
    outfile.write(str(n_atoms)+"\n\n")
    for x in range(intvl[0]-1, intvl[1]-1):
        column = text[x].split()
        print(code[column[1]],float(column[3]),float(column[4]),float(column[5]), file=outfile)

outfile.close()