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jerome24

openmrs interface error 1

jerome24
Apr 30th, 2021
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  1. SSH Secure Shell 3.2.9 (Build 283)
  2. Copyright (c) 2000-2003 SSH Communications Security Corp - http://www.ssh.com/
  3.  
  4. This copy of SSH Secure Shell is a non-commercial version.
  5. This version does not include PKI and PKCS #11 functionality.
  6.  
  7.  
  8. Welcome to Ubuntu 14.04.6 LTS (GNU/Linux 4.4.0-148-generic x86_64)
  9.  
  10. * Documentation: https://help.ubuntu.com/
  11.  
  12. System information as of Thu Apr 29 12:22:22 EAT 2021
  13.  
  14. System load: 0.0 Processes: 114
  15. Usage of /: 13.5% of 287.39GB Users logged in: 1
  16. Memory usage: 41% IP address for eth0: 192.168.0.129
  17. Swap usage: 0%
  18.  
  19. Graph this data and manage this system at:
  20. https://landscape.canonical.com/
  21.  
  22. Your Hardware Enablement Stack (HWE) is supported until April 2019.
  23. Last login: Thu Apr 29 12:22:25 2021 from 192.168.10.36
  24. admincdci@cdciserver:~$ cd /var/lib/tomcat7
  25. admincdci@cdciserver:/var/lib/tomcat7$ tail -f logs/catalina.out
  26. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2078) |2021-04-30 14:30:20,909| Unable to find a runtime properties file at /var/lib/tomcat7/openmrs-runtime.properties
  27. Apr 30, 2021 2:30:21 PM org.apache.catalina.startup.HostConfig deployDirectory
  28. INFO: Deploying web application directory /var/lib/tomcat7/webapps/ROOT
  29. Apr 30, 2021 2:30:21 PM org.apache.coyote.AbstractProtocol start
  30. INFO: Starting ProtocolHandler ["http-bio-8080"]
  31. Apr 30, 2021 2:30:21 PM org.apache.catalina.startup.Catalina start
  32. INFO: Server startup in 42011 ms
  33. Apr 30, 2021 3:03:20 PM org.apache.coyote.http11.AbstractHttp11Processor process
  34. INFO: Error parsing HTTP request header
  35. Note: further occurrences of HTTP header parsing errors will be logged at DEBUG level.
  36. Apr 30, 2021 3:21:56 PM org.apache.coyote.http11.AbstractHttp11Processor process
  37. INFO: Error parsing HTTP request header
  38. Note: further occurrences of HTTP header parsing errors will be logged at DEBUG level.
  39. Apr 30, 2021 4:12:35 PM org.apache.coyote.AbstractProtocol pause
  40. INFO: Pausing ProtocolHandler ["http-bio-8080"]
  41. Apr 30, 2021 4:12:35 PM org.apache.catalina.core.StandardService stopInternal
  42. INFO: Stopping service Catalina
  43. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,418| QUERY: [CRITERIA] select this_.property as property1_43_0_, this_.property_value as property2_43_0_, this_.description as descript3_43_0_, this_.datatype as datatype4_43_0_, this_.datatype_config as datatype5_43_0_, this_.preferred_handler as preferre6_43_0_, this_.handler_config as handler_7_43_0_, this_.uuid as uuid8_43_0_, this_.changed_by as changed_9_43_0_, this_.date_changed as date_ch10_43_0_ from global_property this_ where lower(this_.property)=?
  44. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,419| Cache Hit Count : 0
  45. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,421| Cache Miss Count: 0
  46. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,422| Cache Put Count : 0
  47. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,422| Execution Count : 18
  48. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,425| Average time : 4
  49. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,426| Row Count : 18
  50. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,426| QUERY: [CRITERIA] select this_.task_config_id as task_con1_89_0_, this_.uuid as uuid2_89_0_, this_.name as name3_89_0_, this_.description as descript4_89_0_, this_.schedulable_class as schedula5_89_0_, this_.repeat_interval as repeat_i6_89_0_, this_.start_time as start_ti7_89_0_, this_.start_time_pattern as start_ti8_89_0_, this_.last_execution_time as last_exe9_89_0_, this_.start_on_startup as start_o10_89_0_, this_.started as started11_89_0_, this_.created_by as created12_89_0_, this_.changed_by as changed13_89_0_, this_.date_created as date_cr14_89_0_, this_.date_changed as date_ch15_89_0_ from scheduler_task_config this_
  51. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,427| Cache Hit Count : 0
  52. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,427| Cache Miss Count: 0
  53. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,428| Cache Put Count : 0
  54. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,428| Execution Count : 1
  55. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,429| Average time : 9
  56. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,429| Row Count : 4
  57. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,430| QUERY: from Role r order by r.role
  58. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,430| Cache Hit Count : 0
  59. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,431| Cache Miss Count: 0
  60. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,431| Cache Put Count : 0
  61. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,432| Execution Count : 1
  62. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,432| Average time : 746
  63. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,433| Row Count : 37
  64. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,433| QUERY: [CRITERIA] select this_.property as property1_43_0_, this_.property_value as property2_43_0_, this_.description as descript3_43_0_, this_.datatype as datatype4_43_0_, this_.datatype_config as datatype5_43_0_, this_.preferred_handler as preferre6_43_0_, this_.handler_config as handler_7_43_0_, this_.uuid as uuid8_43_0_, this_.changed_by as changed_9_43_0_, this_.date_changed as date_ch10_43_0_ from global_property this_ order by this_.property asc
  65. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,434| Cache Hit Count : 0
  66. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,434| Cache Miss Count: 0
  67. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,435| Cache Put Count : 0
  68. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,435| Execution Count : 1
  69. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,436| Average time : 137
  70. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,436| Row Count : 557
  71. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,437| QUERY: from Privilege p order by p.privilege
  72. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,437| Cache Hit Count : 0
  73. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,438| Cache Miss Count: 0
  74. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,438| Cache Put Count : 0
  75. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,438| Execution Count : 1
  76. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,439| Average time : 20
  77. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,440| Row Count : 331
  78. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,440| QUERY: from User u where u.uuid = :uuid
  79. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,441| Cache Hit Count : 0
  80. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,441| Cache Miss Count: 0
  81. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,442| Cache Put Count : 0
  82. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,442| Execution Count : 1229
  83. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,442| Average time : 2
  84. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,443| Row Count : 1229
  85. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,443| QUERY: from HL7InQueue as hiq where hiq.messageState = ? order by HL7InQueueId
  86. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,444| Cache Hit Count : 0
  87. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,445| Cache Miss Count: 0
  88. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,445| Cache Put Count : 0
  89. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,446| Execution Count : 1227
  90. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,446| Average time : 0
  91. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,446| Row Count : 0
  92. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,447| QUERY: [CRITERIA] select this_.property as property1_43_0_, this_.property_value as property2_43_0_, this_.description as descript3_43_0_, this_.datatype as datatype4_43_0_, this_.datatype_config as datatype5_43_0_, this_.preferred_handler as preferre6_43_0_, this_.handler_config as handler_7_43_0_, this_.uuid as uuid8_43_0_, this_.changed_by as changed_9_43_0_, this_.date_changed as date_ch10_43_0_ from global_property this_ where lower(this_.property) like ?
  93. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,447| Cache Hit Count : 0
  94. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,448| Cache Miss Count: 0
  95. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,448| Cache Put Count : 0
  96. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,449| Execution Count : 1
  97. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,449| Average time : 4
  98. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,450| Row Count : 51
  99. INFO - HibernateContextDAO.showUsageStatistics(414) |2021-04-30 16:12:35,451| QUERY: select distinct user from User as user inner join user.person.names as name inner join user.roles as role where user.uuid != :DAEMON_USER_UUID and user.retired = false and role in (:roleList)
  100. INFO - HibernateContextDAO.showUsageStatistics(416) |2021-04-30 16:12:35,451| Cache Hit Count : 0
  101. INFO - HibernateContextDAO.showUsageStatistics(417) |2021-04-30 16:12:35,452| Cache Miss Count: 0
  102. INFO - HibernateContextDAO.showUsageStatistics(418) |2021-04-30 16:12:35,452| Cache Put Count : 0
  103. INFO - HibernateContextDAO.showUsageStatistics(419) |2021-04-30 16:12:35,452| Execution Count : 1
  104. INFO - HibernateContextDAO.showUsageStatistics(420) |2021-04-30 16:12:35,453| Average time : 251
  105. INFO - HibernateContextDAO.showUsageStatistics(421) |2021-04-30 16:12:35,453| Row Count : 20
  106. Apr 30, 2021 4:12:35 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads
  107. SEVERE: The web application [/openmrs] appears to have started a thread named [FileWatchdog] but has failed to stop it. This is very likely to create a memory leak.
  108. Apr 30, 2021 4:12:35 PM org.apache.catalina.loader.WebappClassLoader clearReferencesThreads
  109. SEVERE: The web application [/openmrs] appears to have started a thread named [Abandoned connection cleanup thread] but has failed to stop it. This is very likely to create a memory leak.
  110. Apr 30, 2021 4:12:35 PM org.apache.catalina.loader.WebappClassLoader checkThreadLocalMapForLeaks
  111. SEVERE: The web application [/openmrs] created a ThreadLocal with key of type [org.springframework.core.NamedThreadLocal] (value [Transactional resources]) and a value of type [java.util.HashMap] (value [{org.hibernate.internal.SessionFactoryImpl@61223dac=org.springframework.orm.hibernate4.SessionHolder@17bc6f0f}]) but failed to remove it when the web application was stopped. Threads are going to be renewed over time to try and avoid a probable memory leak.
  112. Apr 30, 2021 4:12:35 PM org.apache.coyote.AbstractProtocol stop
  113. INFO: Stopping ProtocolHandler ["http-bio-8080"]
  114. Apr 30, 2021 4:12:35 PM org.apache.coyote.AbstractProtocol destroy
  115. INFO: Destroying ProtocolHandler ["http-bio-8080"]
  116. ^[[AOpenJDK 64-Bit Server VM warning: ignoring option PermSize=256m; support was removed in 8.0
  117. OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=1024m; support was removed in 8.0
  118. Apr 30, 2021 4:17:12 PM org.apache.catalina.startup.ClassLoaderFactory validateFile
  119. WARNING: Problem with directory [/usr/share/tomcat7/common/classes], exists: [false], isDirectory: [false], canRead: [false]
  120. Apr 30, 2021 4:17:12 PM org.apache.catalina.startup.ClassLoaderFactory validateFile
  121. WARNING: Problem with directory [/usr/share/tomcat7/common], exists: [false], isDirectory: [false], canRead: [false]
  122. Apr 30, 2021 4:17:12 PM org.apache.catalina.startup.ClassLoaderFactory validateFile
  123. WARNING: Problem with directory [/usr/share/tomcat7/server/classes], exists: [false], isDirectory: [false], canRead: [false]
  124. Apr 30, 2021 4:17:12 PM org.apache.catalina.startup.ClassLoaderFactory validateFile
  125. WARNING: Problem with directory [/usr/share/tomcat7/server], exists: [false], isDirectory: [false], canRead: [false]
  126. Apr 30, 2021 4:17:12 PM org.apache.catalina.startup.ClassLoaderFactory validateFile
  127. WARNING: Problem with directory [/usr/share/tomcat7/shared/classes], exists: [false], isDirectory: [false], canRead: [false]
  128. Apr 30, 2021 4:17:12 PM org.apache.catalina.startup.ClassLoaderFactory validateFile
  129. WARNING: Problem with directory [/usr/share/tomcat7/shared], exists: [false], isDirectory: [false], canRead: [false]
  130. Apr 30, 2021 4:17:13 PM org.apache.coyote.AbstractProtocol init
  131. INFO: Initializing ProtocolHandler ["http-bio-8080"]
  132. Apr 30, 2021 4:17:13 PM org.apache.catalina.startup.Catalina load
  133. INFO: Initialization processed in 1003 ms
  134. Apr 30, 2021 4:17:14 PM org.apache.catalina.core.StandardService startInternal
  135. INFO: Starting service Catalina
  136. Apr 30, 2021 4:17:14 PM org.apache.catalina.core.StandardEngine startInternal
  137. INFO: Starting Servlet Engine: Apache Tomcat/7.0.52 (Ubuntu)
  138. Apr 30, 2021 4:17:14 PM org.apache.catalina.startup.HostConfig deployDescriptor
  139. INFO: Deploying configuration descriptor /etc/tomcat7/Catalina/localhost/manager.xml
  140. Apr 30, 2021 4:17:14 PM org.apache.catalina.startup.HostConfig deployDescriptor
  141. INFO: Deploying configuration descriptor /etc/tomcat7/Catalina/localhost/host-manager.xml
  142. Apr 30, 2021 4:17:14 PM org.apache.catalina.startup.HostConfig deployWAR
  143. INFO: Deploying web application archive /var/lib/tomcat7/webapps/openmrs.war
  144. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2078) |2021-04-30 16:17:24,225| Unable to find a runtime properties file at /var/lib/tomcat7/openmrs-runtime.properties
  145. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2078) |2021-04-30 16:17:24,249| Unable to find a runtime properties file at /var/lib/tomcat7/openmrs-runtime.properties
  146. INFO - Listener.contextInitialized(173) |2021-04-30 16:17:24,252| Using runtime properties file: /usr/share/tomcat7/.OpenMRS/openmrs-runtime.properties
  147. INFO 4/30/21 4:17 PM:liquibase: Reading from `liquibasechangelog`
  148. WARNING 4/30/21 4:17 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  149. WARNING 4/30/21 4:17 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  150. WARNING 4/30/21 4:17 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  151. INFO - EhCacheManagerFactoryBean.afterPropertiesSet(129) |2021-04-30 16:17:32,187| Initializing EhCache CacheManager
  152. WARN - SimpleUrlHandlerMapping.registerHandlers(115) |2021-04-30 16:17:44,480| Neither 'urlMap' nor 'mappings' set on SimpleUrlHandlerMapping
  153. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2078) |2021-04-30 16:17:44,578| Unable to find a runtime properties file at /var/lib/tomcat7/openmrs-runtime.properties
  154. INFO 4/30/21 4:17 PM:liquibase: Reading from `liquibasechangelog`
  155. WARNING 4/30/21 4:17 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  156. WARNING 4/30/21 4:17 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  157. WARNING 4/30/21 4:17 PM:liquibase: modifyDataType will lose primary key/autoincrement/not null settings for mysql. Use <sql> and re-specify all configuration if this is the case
  158. INFO - LoggingAdvice.invoke(116) |2021-04-30 16:17:47,399| In method AdministrationService.saveGlobalProperty. Arguments: GlobalProperty=property: drugOrder.requireOutpatientQuantity value: true,
  159. INFO - LoggingAdvice.invoke(156) |2021-04-30 16:17:47,627| Exiting method saveGlobalProperty
  160. ERROR - ModuleFactory.startModules(240) |2021-04-30 16:17:47,820| Could not start some modules because they depend on others which are not started. Please first start them or use the "Start All" button on the "Manage Modules" page: [owa->legacyui, fhir->legacyui, webservices.rest->legacyui, owa->webservices.rest]
  161. org.openmrs.util.CycleException: [owa->legacyui, fhir->legacyui, webservices.rest->legacyui, owa->webservices.rest]
  162. at org.openmrs.util.Graph.topologicalSort(Graph.java:168)
  163. at org.openmrs.module.ModuleFactory.getModulesInStartupOrder(ModuleFactory.java:348)
  164. at org.openmrs.module.ModuleFactory.startModules(ModuleFactory.java:236)
  165. at org.openmrs.module.ModuleUtil.startup(ModuleUtil.java:130)
  166. at org.openmrs.api.context.Context.startup(Context.java:895)
  167. at org.openmrs.web.Listener.startOpenmrs(Listener.java:232)
  168. at org.openmrs.web.WebDaemon$1.run(WebDaemon.java:42)
  169. INFO - LoggingAdvice.invoke(116) |2021-04-30 16:17:48,220| In method AlertService.saveAlert. Arguments: Alert=Alert: #null,
  170. INFO - LoggingAdvice.invoke(156) |2021-04-30 16:17:48,283| Exiting method saveAlert
  171. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2078) |2021-04-30 16:17:52,205| Unable to find a runtime properties file at /var/lib/tomcat7/openmrs-runtime.properties
  172. WARN - OpenmrsUtil.getRuntimePropertiesFilePathName(2078) |2021-04-30 16:17:52,545| Unable to find a runtime properties file at /var/lib/tomcat7/openmrs-runtime.properties
  173. Apr 30, 2021 4:17:52 PM org.apache.catalina.startup.HostConfig deployDirectory
  174. INFO: Deploying web application directory /var/lib/tomcat7/webapps/ROOT
  175. Apr 30, 2021 4:17:53 PM org.apache.coyote.AbstractProtocol start
  176. INFO: Starting ProtocolHandler ["http-bio-8080"]
  177. Apr 30, 2021 4:17:53 PM org.apache.catalina.startup.Catalina start
  178. INFO: Server startup in 39197 ms
  179.  
  180.  
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