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  1. Charmrun> scalable start enabled.
  2. Charmrun> started all node programs in 1.216 seconds.
  3. Charm++> Running in SMP mode: 4 processes, 1 worker threads (PEs) + 1 comm threads per process, 4 PEs total
  4. Charm++> The comm. thread both sends and receives messages
  5. Converse/Charm++ Commit ID: v6.10.1
  6. Warning> Randomization of virtual memory (ASLR) is turned on in the kernel, thread migration may not work! Run 'echo 0 > /proc/sys/kernel/randomize_va_space' as root to disable it, or try running with '+isomalloc_sync'.
  7. Charm++> scheduler running in netpoll mode.
  8. CharmLB> Load balancer assumes all CPUs are same.
  9. Charm++> Running on 1 hosts (1 sockets x 4 cores x 2 PUs = 8-way SMP)
  10. Charm++> cpu topology info is gathered in 0.039 seconds.
  11. 0 00000.00 Parameters Boundary:type = "periodic"
  12. 0 00000.00 Parameters Domain:lower = [ 0.000000000000000 0.000000000000000 0.000000000000000 ]
  13. 0 00000.00 Parameters Domain:upper = [ 1.000000000000000 0.2500000000000000 0.2500000000000000 ]
  14. 0 00000.00 Parameters Field:gamma = 1.666666666666667
  15. 0 00000.00 Parameters Field:ghost_depth = 4
  16. 0 00000.00 Parameters Field:list = [ "density" "pressure" "velocity_x" "velocity_y" "velocity_z" "total_energy" "internal_energy" ]
  17. 0 00000.00 Parameters Group:conserved:field_list = [ "density" "total_energy" "velocity_x" "velocity_y" "velocity_z" ]
  18. 0 00000.00 Parameters Group:list = [ "conserved" "make_field_conservative" ]
  19. 0 00000.00 Parameters Group:make_field_conservative:field_list = [ "velocity_x" "velocity_y" "velocity_z" "total_energy" ]
  20. 0 00000.00 Parameters Initial:inclined_wave:alpha = 0.000000000000000
  21. 0 00000.00 Parameters Initial:inclined_wave:amplitude = 1.000000000000000e-06
  22. 0 00000.00 Parameters Initial:inclined_wave:beta = 0.000000000000000
  23. 0 00000.00 Parameters Initial:inclined_wave:lambda = 1.000000000000000
  24. 0 00000.00 Parameters Initial:inclined_wave:positive_vel = true
  25. 0 00000.00 Parameters Initial:inclined_wave:wave_type = "hd_entropy"
  26. 0 00000.00 Parameters Initial:list = [ "inclined_wave" ]
  27. 0 00000.00 Parameters Mesh:root_blocks = [ 4 1 1 ]
  28. 0 00000.00 Parameters Mesh:root_rank = 3
  29. 0 00000.00 Parameters Mesh:root_size = [ 16 4 4 ]
  30. 0 00000.00 Parameters Method:list = [ "ppm" ]
  31. 0 00000.00 Parameters Method:ppm:courant = 0.8000000000000000
  32. 0 00000.00 Parameters Method:ppm:diffusion = false
  33. 0 00000.00 Parameters Method:ppm:dual_energy = false
  34. 0 00000.00 Parameters Method:ppm:flattening = 0
  35. 0 00000.00 Parameters Method:ppm:steepening = false
  36. 0 00000.00 Parameters Output:data:dir = [ "x-axis_sound_unigrid_%03d" "cycle" ]
  37. 0 00000.00 Parameters Output:data:field_list = [ "density" "velocity_x" "velocity_y" "velocity_z" "total_energy" "pressure" ]
  38. 0 00000.00 Parameters Output:data:name = [ "data-%04d.h5" "proc" ]
  39. 0 00000.00 Parameters Output:data:schedule:list = [ 0.000000000000000 1.000000000000000 ]
  40. 0 00000.00 Parameters Output:data:schedule:var = "time"
  41. 0 00000.00 Parameters Output:data:type = "data"
  42. 0 00000.00 Parameters Output:list = [ "data" ]
  43. 0 00000.00 Parameters Stopping:time = 1.000000000000000
  44. UNIT TEST BEGIN
  45. 0 00001.05 ==============================================
  46. 0 00001.05
  47. 0 00001.05 .oooooo. oooo oooo
  48. 0 00001.05 d8P' `Y8b `888 `888
  49. 0 00001.05 888 .ooooo. 888 888 .ooooo.
  50. 0 00001.05 888 d88' `88b 888 888 d88' `88b
  51. 0 00001.05 888 888ooo888 888 888 888 888
  52. 0 00001.05 `88b ooo 888 .o 888 888 888 888
  53. 0 00001.05 `Y8bood8P' `Y8bod8P' o888o o888o `Y8bod8P'
  54. 0 00001.05
  55. 0 00001.05 A Parallel Adaptive Mesh Refinement Framework
  56. 0 00001.05
  57. 0 00001.05 Laboratory for Computational Astrophysics
  58. 0 00001.05 San Diego Supercomputer Center
  59. 0 00001.05 University of California, San Diego
  60. 0 00001.05
  61. 0 00001.05 See 'LICENSE_CELLO' for software license information
  62. 0 00001.05
  63. 0 00001.05 BEGIN CELLO: Jul 02 12:59:07
  64. 0 00001.05 Define Simulation processors 4
  65. 0 00001.05 Define CELLO_ARCH linux_gnu
  66. 0 00001.05 Define CELLO_PREC double
  67. 0 00001.05 Define CC gcc
  68. 0 00001.05 Define CFLAGS -O3 -g -ffast-math -funroll-loops -fPIC -pedantic
  69. 0 00001.05 Define CPPDEFINES CONFIG_PRECISION_DOUBLE SMALL_INTS {'CONFIG_NODE_SIZE': 64} {'CONFIG_NODE_SIZE_3': 192} NO_FREETYPE CONFIG_USE_PERFORMANCE CONFIG_USE_GRACKLE CONFIG_USE_MEMORY CONFIG_HAVE_VERSION_CONTROL
  70. 0 00001.05 Define CPPPATH #/include /usr/include/hdf5/serial /usr/include/boost /home/mabruzzo/packages/c++/grackle/include /lib/x86_64-linux-gnu/include
  71. 0 00001.05 Define CXX /home/mabruzzo/packages/c++/charm/bin/charmc -language charm++
  72. 0 00001.05 Define CXXFLAGS -O3 -g -ffast-math -funroll-loops -fPIC -pedantic -balancer CommonLBs
  73. 0 00001.05 Define FORTRANFLAGS -O3 -g -ffast-math -funroll-loops -fPIC -pedantic -ffixed-line-length-132 -fdefault-real-8 -fdefault-double-8
  74. 0 00001.05 Define FORTRAN gfortran
  75. 0 00001.05 Define FORTRANLIBS gfortran
  76. 0 00001.05 Define FORTRANPATH #/include
  77. 0 00001.05 Define LIBPATH #/lib /usr/lib/x86_64-linux-gnu/hdf5/serial /usr/lib/x86_64-linux-gnu /home/mabruzzo/packages/c++/grackle/lib /lib/x86_64-linux-gnu/lib /usr/lib/x86_64-linux-gnu
  78. 0 00001.05 Define LINKFLAGS -O3 -g -ffast-math -funroll-loops -fPIC -pedantic -module CommonLBs
  79. 0 00001.05 Define BUILD HOST charlie
  80. 0 00001.05 Define BUILD DIR /home/mabruzzo/hydro/enzo-e
  81. 0 00001.05 Define BUILD DATE (UTC) 2021-06-25
  82. 0 00001.05 Define BUILD TIME (UTC) 14:36:45
  83. 0 00001.05 Define CHANGESET b'55efdcd2ca6cacfd2f966e54d4b349a0246ef260'
  84. 0 00001.05 Define NEW_OUTPUT no
  85. 0 00001.05 Define CHARM_PATH /home/mabruzzo/packages/c++/charm
  86. 0 00001.05 Define CHARM_VERSION 61001
  87. 0 00001.05 Define CHARM_BUILD netlrts-linux-x86_64-smp
  88. 0 00001.05 Define CONFIG_NODE_SIZE 64
  89. 0 00001.05 Define CONFIG_SMP_MODE no
  90. 0 00001.05 CHARM CkNumPes() 4
  91. 0 00001.05 CHARM CkNumNodes() 4
  92. 0 00001.05 BEGIN ENZO-E
  93. 0 00001.05 Memory bytes 197177 bytes_high 197231
  94. 0 00001.10 Output writing data file ./x-axis_sound_unigrid_000/data-0000.h5
  95. 0 00001.10 -------------------------------------
  96. 0 00001.10 Simulation cycle 0000
  97. 0 00001.10 Simulation time-sim 0.000000000000e+00
  98. 0 00001.10 Simulation dt 0.000000000000e+00
  99. 0 00001.10 Performance counter num-msg-coarsen 0
  100. 0 00001.10 Performance counter num-msg-refine 3
  101. 0 00001.10 Performance counter num-msg-refresh 0
  102. 0 00001.10 Performance counter num-data-msg 0
  103. 0 00001.10 Performance counter num-field-face 0
  104. 0 00001.10 Performance counter num-particle-data 4
  105. 0 00001.10 Performance simulation num-particles total 0
  106. 0 00001.10 performance simulation num-blocks-level 0 4
  107. 0 00001.10 Performance simulation num-leaf-blocks 4
  108. 0 00001.10 Performance simulation num-total-blocks 4
  109. 0 00001.10 Performance simulation time-usec 102078
  110. 0 00001.10 Performance cycle time-usec 0
  111. 0 00001.10 Performance cycle bytes-curr 0
  112. 0 00001.11 Performance cycle bytes-high 0
  113. 0 00001.11 Performance cycle bytes-highest 0
  114. 0 00001.11 Performance cycle bytes-available 0
  115. 0 00001.11 Performance initial time-usec -806
  116. 0 00001.11 Performance adapt_apply time-usec 110
  117. 0 00001.11 Performance adapt_apply_sync time-usec 18
  118. 0 00001.11 Performance adapt_update time-usec 1265
  119. 0 00001.11 Performance adapt_update_sync time-usec 54639
  120. 0 00001.11 Performance adapt_notify time-usec 150
  121. 0 00001.11 Performance adapt_notify_sync time-usec 5
  122. 0 00001.11 Performance adapt_end time-usec 4
  123. 0 00001.11 Performance adapt_end_sync time-usec 810
  124. 0 00001.11 Performance refresh_store time-usec 0
  125. 0 00001.11 Performance refresh_child time-usec 0
  126. 0 00001.11 Performance refresh_exit time-usec 0
  127. 0 00001.11 Performance refresh_store_sync time-usec 0
  128. 0 00001.11 Performance refresh_child_sync time-usec 0
  129. 0 00001.11 Performance refresh_exit_sync time-usec 0
  130. 0 00001.11 Performance control time-usec 21
  131. 0 00001.11 Performance compute time-usec 0
  132. 0 00001.11 Performance output time-usec 17704
  133. 0 00001.11 Performance stopping time-usec 0
  134. 0 00001.11 Performance block time-usec 2514
  135. 0 00001.11 Performance exit time-usec 0
  136. 0 00001.11 Performance grackle time-usec 0
  137. 0 00001.11 Performance simulation max-proc-blocks 1
  138. 0 00001.11 Performance simulation max-node-blocks 1
  139. 0 00001.11 Performance simulation max-proc-particles 0
  140. 0 00001.11 Performance simulation max-node-particles 0
  141. 0 00001.11 Performance simulation balance-eff-blocks-core 1.000000 (1/1)
  142. 0 00001.11 Performance simulation balance-eff-blocks-node 1.000000 (1/1)
  143. ------------- Processor 1 Exiting: Caught Signal ------------
  144. Reason: segmentation violation
  145. Suggestion: Try running with '++debug', or linking with '-memory paranoid' (memory paranoid requires '+netpoll' at runtime).
  146. [1] Stack Traceback:
  147. [1:0] libpthread.so.0 0x7f0d39d173c0
  148. [1:1] enzo-e 0x55cf0cd8820d xeuler_sweep_
  149. [1:2] enzo-e 0x55cf0cd573ba ppm_de_
  150. [1:3] enzo-e 0x55cf0cd1e555 EnzoBlock::SolveHydroEquations(double, double, bool)
  151. [1:4] enzo-e 0x55cf0ccc9df9 EnzoMethodPpm::compute(Block*)
  152. [1:5] enzo-e 0x55cf0ce0f69e Block::compute_continue_()
  153. [1:6] enzo-e 0x55cf0cda09e0 CkIndex_Block::_call_p_compute_continue_void(void*, void*)
  154. [1:7] enzo-e 0x55cf0ca7a003 CkDeliverMessageFree
  155. [1:8] enzo-e 0x55cf0caa76fc CkLocRec::invokeEntry(CkMigratable*, void*, int, bool)
  156. [1:9] enzo-e 0x55cf0ca82610 _processHandler(void*, CkCoreState*)
  157. [1:10] enzo-e 0x55cf0cb98d87 CsdScheduleForever
  158. [1:11] enzo-e 0x55cf0cb99465 CsdScheduler
  159. [1:12] enzo-e 0x55cf0cb9443e
  160. [1:13] enzo-e 0x55cf0cb95b04 ConverseInit
  161. [1:14] enzo-e 0x55cf0ca6f2bd charm_main
  162. [1:15] libc.so.6 0x7f0d390cf0b3 __libc_start_main
  163. [1:16] enzo-e 0x55cf0c9f151e _start
  164. Fatal error on PE 1> segmentation violation
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