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  1. ##gff-version 3
  2. ##sequence-region NC_001806 1 152222
  3. # conversion-by bp_genbank2gff3.pl
  4. # organism Human alphaherpesvirus 1
  5. # Note Human herpesvirus 1 strain 17, complete genome.
  6. # date 13-AUG-2018
  7. NC_001806.2 GenBank region 1 152222 . + 1 ID=NC_001806;Dbxref=BioProject:PRJNA485481,taxon:10298;Name=NC_001806;Note=Human herpesvirus 1 strain 17%2C complete genome.,PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to JN555585. On May 12,2015 this sequence version replaced NC_001806.1. The original gene nomenclature has been retained. Genes presumably inherited from the common ancestor of alpha-,beta- and gammaherpesviruses (core genes) and non-core genes presumably inherited from the ancestor of alphaherpesviruses (alpha genes) are indicated. Initiation codons are assigned with as much confidence as is possible for each protein-coding region. A standard protein nomenclature has been applied so that orthologs have the same name in all herpesviruses. \n##Assembly-Data-START##\nAssembly Method :: Maq v. 0.7.1\nSequencing Technology :: Illumina\n##Assembly-Data-END##,collected prior to 1972%3B collected prior to 1972%3B original sequence (INSD accession X14112) determined by Sanger sequencing of plasmids amended by Illumina sequencing of both viral DNA and polyA RNA harvested at 8 h after infection;acronym=HHV-1,HSV-1;collected_by=C.A.C. Ross;comment1=PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to JN555585. On May 12%2C 2015 this sequence version replaced NC_001806.1. The original gene nomenclature has been retained. Genes presumably inherited from the common ancestor of alpha-%2C beta- and gammaherpesviruses (core genes) and non-core genes presumably inherited from the ancestor of alphaherpesviruses (alpha genes) are indicated. Initiation codons are assigned with as much confidence as is possible for each protein-coding region. A standard protein nomenclature has been applied so that orthologs have the same name in all herpesviruses. \n##Assembly-Data-START##\nAssembly Method :: Maq v. 0.7.1\nSequencing Technology :: Illumina\n##Assembly-Data-END##;country=United Kingdom: Regional Virus Laboratory%2C Ruchill Hospital%2C Glasgow;date=13-AUG-2018;mol_type=genomic DNA;organism=Human alphaherpesvirus 1;strain=17
  8. NC_001806.2 GenBank repeat_region 1 9213 . + 1 ID=GenBank:repeat_region:NC_001806:1:9213;Note=TRL%3B inverted repeat flanking UL;rpt_type=inverted
  9. NC_001806.2 GenBank repeat_region 1 399 . + 1 ID=GenBank:repeat_region:NC_001806:1:399;Note='a' sequence;rpt_type=direct,terminal
  10. NC_001806.2 GenBank repeat_region 98 320 . + 1 ID=GenBank:repeat_region:NC_001806:98:320;Note='a' sequence reiteration set;rpt_type=direct,tandem;rpt_unit_range=98..109
  11. ###
  12. NC_001806.2 GenBank gene 1 7569 . - 1 ID=HHV1gp00s01;Dbxref=GeneID:24271498;Name=LAT;locus_tag=HHV1gp00s01
  13. NC_001806.2 GenBank ncRNA 1 7569 . - 1 ID=HHV1gp00s01.r01;Parent=HHV1gp00s01;Dbxref=GeneID:24271498;Name=LAT;locus_tag=HHV1gp00s01;ncRNA_class=other;product=LAT
  14. NC_001806.2 GenBank exon 1 4953 . - 1 Parent=HHV1gp00s01.r01;Name=LAT;locus_tag=HHV1gp00s01
  15. NC_001806.2 GenBank exon 6910 7569 . - 1 Parent=HHV1gp00s01.r01;Name=LAT;locus_tag=HHV1gp00s01
  16. NC_001806.2 GenBank CDS 513 1259 . + 1 ID=HHV1gp00p77;Dbxref=GeneID:2703395;Name=RL1;Note=virion protein%3B inhibits stress-induced translational arrest%3B related to eIF2 phosphatase regulatory subunit GADD34%3B binds protein phosphatase 1 to form a holoenzyme capable of dephosphorylating eIF2-alpha%3B involved in translational regulation;codon_start=1;locus_tag=HHV1gp00p77;product=neurovirulence protein ICP34.5;protein_id=YP_009137073.1;translation=length.248
  17. NC_001806.2 GenBank gene 513 1540 . + 1 ID=HHV1gp00p77.gene;Alias=HHV1gp00p77;Dbxref=GeneID:2703395;Name=RL1;locus_tag=HHV1gp00p77
  18. NC_001806.2 GenBank gene_component_region 988 1040 . + 1 Parent=HHV1gp00p77;Name=RL1;Note=RL reiteration set 6;locus_tag=HHV1gp00p77;rpt_type=direct,tandem;rpt_unit_range=988..996
  19. NC_001806.2 GenBank regulatory 1535 1540 . + 1 Parent=HHV1gp00p77;Name=RL1;locus_tag=HHV1gp00p77;regulatory_class=polyA_signal_sequence
  20. NC_001806.2 GenBank repeat_region 5732 5878 . + 1 ID=GenBank:repeat_region:NC_001806:5732:5878;Note=RL reiteration set 4;rpt_type=direct,tandem;rpt_unit_range=5732..5747
  21. NC_001806.2 GenBank regulatory 7592 7597 . - 1 ID=GenBank:regulatory:NC_001806:7592:7597;regulatory_class=TATA_box
  22. NC_001806.2 GenBank repeat_region 8554 8585 . + 1 ID=GenBank:repeat_region:NC_001806:8554:8585;Note=RL reiteration set 3;rpt_type=direct,tandem;rpt_unit_range=8554..8558
  23. NC_001806.2 GenBank repeat_region 8806 8826 . + 1 ID=GenBank:repeat_region:NC_001806:8806:8826;Note=RL reiteration set 2;rpt_type=direct,tandem;rpt_unit_range=8806..8808
  24. NC_001806.2 GenBank repeat_region 9033 9213 . + 1 ID=GenBank:repeat_region:NC_001806:9033:9213;Note=RL reiteration set 1;rpt_type=direct,tandem;rpt_unit_range=9033..9049
  25. NC_001806.2 GenBank region 9214 117160 . + 1 ID=GenBank:region:NC_001806:9214:117160;Note=UL%3B long unique region
  26. ###
  27. NC_001806.2 GenBank gene 2087 5699 . + 1 ID=HHV1gp00p76;Dbxref=GeneID:2703389;Name=RL2;Note=immediate early gene;locus_tag=HHV1gp00p76
  28. NC_001806.2 GenBank gene_component_region 2466 2624 . + 1 Parent=HHV1gp00p76;Name=RL2;Note=RL reiteration set 5;locus_tag=HHV1gp00p76;rpt_type=direct,tandem;rpt_unit_range=2466..2519
  29. NC_001806.2 GenBank mRNA 2114 5699 . + 1 ID=HHV1gp00p76.t01;Parent=HHV1gp00p76;Dbxref=GeneID:2703389;Name=RL2;locus_tag=HHV1gp00p76;product=ubiquitin E3 ligase ICP0
  30. NC_001806.2 GenBank regulatory 2087 2092 . + 1 Parent=HHV1gp00p76;Name=RL2;locus_tag=HHV1gp00p76;regulatory_class=TATA_box
  31. NC_001806.2 GenBank regulatory 5677 5682 . + 1 Parent=HHV1gp00p76;Name=RL2;locus_tag=HHV1gp00p76;regulatory_class=polyA_signal_sequence
  32. NC_001806.2 GenBank CDS 2262 2318 . + 1 ID=HHV1gp00p76.p01;Parent=HHV1gp00p76.t01;Dbxref=GeneID:2703389;Name=RL2;Note=contains a RING finger%3B disrupts ND10%3B proteasome-dependent degradation of several cellular proteins%3B involved in gene regulation%3B involved in cellular protein degradation%3B involved in latency;codon_start=1;locus_tag=HHV1gp00p76;product=ubiquitin E3 ligase ICP0;protein_id=YP_009137074.1;translation=length.775
  33. NC_001806.2 GenBank CDS 3084 3749 . + 1 ID=HHV1gp00p76.p01;Parent=HHV1gp00p76.t01;Dbxref=GeneID:2703389;Name=RL2;Note=contains a RING finger%3B disrupts ND10%3B proteasome-dependent degradation of several cellular proteins%3B involved in gene regulation%3B involved in cellular protein degradation%3B involved in latency;codon_start=1;locus_tag=HHV1gp00p76;product=ubiquitin E3 ligase ICP0;protein_id=YP_009137074.1;translation=length.775
  34. NC_001806.2 GenBank CDS 3886 5490 . + 1 ID=HHV1gp00p76.p01;Parent=HHV1gp00p76.t01;Dbxref=GeneID:2703389;Name=RL2;Note=contains a RING finger%3B disrupts ND10%3B proteasome-dependent degradation of several cellular proteins%3B involved in gene regulation%3B involved in cellular protein degradation%3B involved in latency;codon_start=1;locus_tag=HHV1gp00p76;product=ubiquitin E3 ligase ICP0;protein_id=YP_009137074.1;translation=length.775
  35. NC_001806.2 GenBank exon 2114 2318 . + 1 Parent=HHV1gp00p76.t01;Name=RL2;locus_tag=HHV1gp00p76
  36. NC_001806.2 GenBank exon 3084 3750 . + 1 Parent=HHV1gp00p76.t01;Name=RL2;locus_tag=HHV1gp00p76
  37. NC_001806.2 GenBank exon 3887 5699 . + 1 Parent=HHV1gp00p76.t01;Name=RL2;locus_tag=HHV1gp00p76
  38. ###
  39. NC_001806.2 GenBank CDS 9338 10012 . + 1 ID=HHV1gp00p75;Dbxref=GeneID:2703393;Name=UL1;Note=contains a signal peptide%3B complexed with envelope glycoprotein H%3B involved in cell entry%3B involved in cell-to-cell spread;codon_start=1;locus_tag=HHV1gp00p75;product=envelope glycoprotein L;protein_id=YP_009137075.1;translation=length.224
  40. NC_001806.2 GenBank gene 9338 10949 . + 1 ID=HHV1gp00p75.gene;Alias=HHV1gp00p75;Dbxref=GeneID:2703393;Name=UL1;Note=core gene;locus_tag=HHV1gp00p75
  41. ###
  42. NC_001806.2 GenBank CDS 9885 10889 . + 1 ID=HHV1gp00p74;Dbxref=GeneID:2703370;eC_number=3.2.2.3;Name=UL2;Note=involved in DNA repair;codon_start=1;locus_tag=HHV1gp00p74;product=uracil-DNA glycosylase;protein_id=YP_009137076.1;translation=length.334
  43. NC_001806.2 GenBank regulatory 10944 10949 . + 1 ID=GenBank:regulatory:NC_001806:10944:10949;Note=UL1%2C UL2;regulatory_class=polyA_signal_sequence
  44. NC_001806.2 GenBank gene 9885 10949 . + 1 ID=HHV1gp00p74.gene;Alias=HHV1gp00p74;Dbxref=GeneID:2703370;Name=UL2;Note=core gene;locus_tag=HHV1gp00p74
  45. ###
  46. NC_001806.2 GenBank CDS 10991 11665 . + 1 ID=HHV1gp00p73;Dbxref=GeneID:2703461;Name=UL3;Note=colocalizes with regulatory protein ICP22 and nuclear protein UL4 in small%2C dense nuclear bodies;codon_start=1;locus_tag=HHV1gp00p73;product=nuclear protein UL3;protein_id=YP_009137077.1;translation=length.224
  47. NC_001806.2 GenBank gene 10991 11721 . + 1 ID=HHV1gp00p73.gene;Alias=HHV1gp00p73;Dbxref=GeneID:2703461;Name=UL3;Note=alpha gene;locus_tag=HHV1gp00p73
  48. NC_001806.2 GenBank regulatory 11716 11721 . + 1 Parent=HHV1gp00p73;Name=UL3;locus_tag=HHV1gp00p73;regulatory_class=polyA_signal_sequence
  49. ###
  50. NC_001806.2 GenBank CDS 12484 15132 . - 1 ID=HHV1gp00p72;Dbxref=GeneID:2703420;Name=UL5;Note=involved in DNA replication;codon_start=1;locus_tag=HHV1gp00p72;product=helicase-primase helicase subunit;protein_id=YP_009137079.1;translation=length.882
  51. NC_001806.2 GenBank gene 11754 15132 . - 1 ID=HHV1gp00p72.gene;Alias=HHV1gp00p72;Dbxref=GeneID:2703420;Name=UL5;Note=core gene;locus_tag=HHV1gp00p72
  52. NC_001806.2 GenBank CDS 11824 12423 . - 1 ID=HHV1gp00p71;Dbxref=GeneID:2703362;Name=UL4;Note=colocalizes with regulatory protein ICP22 and nuclear protein UL3 in small%2C dense nuclear bodies;codon_start=1;locus_tag=HHV1gp00p71;product=nuclear protein UL4;protein_id=YP_009137078.1;translation=length.199
  53. NC_001806.2 GenBank regulatory 11754 11759 . - 1 ID=GenBank:regulatory:NC_001806:11754:11759;Note=UL4%2C UL5;regulatory_class=polyA_signal_sequence
  54. NC_001806.2 GenBank gene 11754 12423 . - 1 ID=HHV1gp00p71.gene;Alias=HHV1gp00p71;Dbxref=GeneID:2703362;Name=UL4;Note=alpha gene;locus_tag=HHV1gp00p71
  55. NC_001806.2 GenBank CDS 15131 17161 . + 1 ID=HHV1gp00p70;Dbxref=GeneID:2703429;Name=UL6;Note=dodecamer located at one capsid vertex in place of a penton%3B involved in DNA encapsidation;codon_start=1;locus_tag=HHV1gp00p70;product=capsid portal protein;protein_id=YP_009137080.1;translation=length.676
  56. NC_001806.2 GenBank gene 15131 18041 . + 1 ID=HHV1gp00p70.gene;Alias=HHV1gp00p70;Dbxref=GeneID:2703429;Name=UL6;Note=core gene;locus_tag=HHV1gp00p70
  57. NC_001806.2 GenBank CDS 17136 18026 . + 1 ID=HHV1gp00p69;Dbxref=GeneID:2703431;Name=UL7;Note=involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p69;product=tegument protein UL7;protein_id=YP_009137081.1;translation=length.296
  58. NC_001806.2 GenBank regulatory 18036 18041 . + 1 ID=GenBank:regulatory:NC_001806:18036:18041;Note=UL6%2C UL7;regulatory_class=polyA_signal_sequence
  59. NC_001806.2 GenBank gene 17136 18041 . + 1 ID=HHV1gp00p69.gene;Alias=HHV1gp00p69;Dbxref=GeneID:2703431;Name=UL7;Note=core gene;locus_tag=HHV1gp00p69
  60. NC_001806.2 GenBank CDS 20705 23260 . - 1 ID=HHV1gp00p68;Dbxref=GeneID:2703434;Name=UL9;Note=involved in DNA replication;codon_start=1;locus_tag=HHV1gp00p68;product=DNA replication origin-binding helicase;protein_id=YP_009137083.1;translation=length.851
  61. NC_001806.2 GenBank gene 18211 23260 . - 1 ID=HHV1gp00p68.gene;Alias=HHV1gp00p68;Dbxref=GeneID:2703434;Name=UL9;Note=core gene;locus_tag=HHV1gp00p68
  62. NC_001806.2 GenBank CDS 18225 20477 . - 1 ID=HHV1gp00p67;Dbxref=GeneID:2703432;Name=UL8;Note=involved in DNA replication;codon_start=1;locus_tag=HHV1gp00p67;product=helicase-primase subunit;protein_id=YP_009137082.1;translation=length.750
  63. NC_001806.2 GenBank regulatory 18211 18216 . - 1 ID=GenBank:regulatory:NC_001806:18211:18216;Note=UL8%2C UL9;regulatory_class=polyA_signal_sequence
  64. NC_001806.2 GenBank gene 18211 20477 . - 1 ID=HHV1gp00p67.gene;Alias=HHV1gp00p67;Dbxref=GeneID:2703432;Name=UL8;Note=core gene;locus_tag=HHV1gp00p67
  65. NC_001806.2 GenBank CDS 23205 24626 . + 1 ID=HHV1gp00p66;Dbxref=GeneID:2703379;Name=UL10;Note=type 3 membrane protein%3B 8 transmembrane domains%3B complexed with envelope glycoprotein N%3B involved in virion morphogenesis%3B involved in membrane fusion;codon_start=1;locus_tag=HHV1gp00p66;product=envelope glycoprotein M;protein_id=YP_009137084.1;translation=length.473
  66. NC_001806.2 GenBank gene 23205 24649 . + 1 ID=HHV1gp00p66.gene;Alias=HHV1gp00p66;Dbxref=GeneID:2703379;Name=UL10;Note=core gene;locus_tag=HHV1gp00p66
  67. NC_001806.2 GenBank regulatory 24644 24649 . + 1 Parent=HHV1gp00p66;Name=UL10;locus_tag=HHV1gp00p66;regulatory_class=polyA_signal_sequence
  68. NC_001806.2 GenBank CDS 28257 28916 . - 1 ID=HHV1gp00p65;Dbxref=GeneID:2703384;Name=UL14;Note=involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p65;product=tegument protein UL14;protein_id=YP_009137088.1;translation=length.219
  69. NC_001806.2 GenBank gene 24801 28916 . - 1 ID=HHV1gp00p65.gene;Alias=HHV1gp00p65;Dbxref=GeneID:2703384;Name=UL14;Note=core gene;locus_tag=HHV1gp00p65
  70. NC_001806.2 GenBank CDS 26947 28503 . - 1 ID=HHV1gp00p64;Dbxref=GeneID:2703383;Name=UL13;Note=involved in protein phosphorylation%3B PK family;codon_start=1;locus_tag=HHV1gp00p64;product=tegument serine/threonine protein kinase;protein_id=YP_009137087.1;translation=length.518
  71. NC_001806.2 GenBank gene 24801 28503 . - 1 ID=HHV1gp00p64.gene;Alias=HHV1gp00p64;Dbxref=GeneID:2703383;Name=UL13;Note=core gene;locus_tag=HHV1gp00p64
  72. NC_001806.2 GenBank CDS 25008 26888 . - 1 ID=HHV1gp00p63;Dbxref=GeneID:24271463;Name=UL12;Note=involved in DNA processing;codon_start=1;locus_tag=HHV1gp00p63;product=deoxyribonuclease;protein_id=YP_009137086.1;translation=length.626
  73. NC_001806.2 GenBank gene 24801 26888 . - 1 ID=HHV1gp00p63.gene;Alias=HHV1gp00p63;Dbxref=GeneID:24271463;Name=UL12;Note=core gene;locus_tag=HHV1gp00p63
  74. NC_001806.2 GenBank CDS 24802 25092 . - 1 ID=HHV1gp00p62;Dbxref=GeneID:24271464;Name=UL11;Note=envelope-associated%3B involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p62;product=myristylated tegument protein;protein_id=YP_009137085.1;translation=length.96
  75. NC_001806.2 GenBank regulatory 24801 24806 . - 1 ID=GenBank:regulatory:NC_001806:24801:24806;Note=UL11%2C UL12%2C UL13%2C UL14;regulatory_class=polyA_signal_sequence
  76. NC_001806.2 GenBank gene 24801 25092 . - 1 ID=HHV1gp00p62.gene;Alias=HHV1gp00p62;Dbxref=GeneID:24271464;Name=UL11;Note=core gene;locus_tag=HHV1gp00p62
  77. NC_001806.2 GenBank CDS 29021 30049 . + 1 ID=HHV1gp00p61;Dbxref=GeneID:2703385;Name=UL15;Note=contains an ATPase domain%3B involved in DNA encapsidation%3B transiently associated with maturing capsids;codon_start=1;locus_tag=HHV1gp00p61;product=DNA packaging terminase subunit 1;protein_id=YP_009137089.1;translation=length.735
  78. NC_001806.2 GenBank CDS 33636 34814 . + 1 ID=HHV1gp00p61;Dbxref=GeneID:2703385;Name=UL15;Note=contains an ATPase domain%3B involved in DNA encapsidation%3B transiently associated with maturing capsids;codon_start=1;locus_tag=HHV1gp00p61;product=DNA packaging terminase subunit 1;protein_id=YP_009137089.1;translation=length.735
  79. NC_001806.2 GenBank gene 29021 34826 . + 1 ID=HHV1gp00p61.gene;Alias=HHV1gp00p61;Dbxref=GeneID:2703385;Name=UL15;Note=core gene;locus_tag=HHV1gp00p61
  80. NC_001806.2 GenBank regulatory 34821 34826 . + 1 Parent=HHV1gp00p61;Name=UL15;locus_tag=HHV1gp00p61;regulatory_class=polyA_signal_sequence
  81. NC_001806.2 GenBank CDS 31387 33498 . - 1 ID=HHV1gp00p60;Dbxref=GeneID:2703388;Name=UL17;Note=capsid-associated%3B involved in DNA encapsidation%3B involved in capsid transport;codon_start=1;locus_tag=HHV1gp00p60;product=DNA packaging tegument protein UL17;protein_id=YP_009137091.1;translation=length.703
  82. NC_001806.2 GenBank gene 30174 33498 . - 1 ID=HHV1gp00p60.gene;Alias=HHV1gp00p60;Dbxref=GeneID:2703388;Name=UL17;Note=core gene;locus_tag=HHV1gp00p60
  83. NC_001806.2 GenBank CDS 30175 31296 . - 1 ID=HHV1gp00p59;Dbxref=GeneID:24271465;Name=UL16;Note=possibly involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p59;product=tegument protein UL16;protein_id=YP_009137090.1;translation=length.373
  84. NC_001806.2 GenBank regulatory 30174 30179 . - 1 ID=GenBank:regulatory:NC_001806:30174:30179;Note=UL16%2C UL17;regulatory_class=polyA_signal_sequence
  85. NC_001806.2 GenBank gene 30174 31296 . - 1 ID=HHV1gp00p59.gene;Alias=HHV1gp00p59;Dbxref=GeneID:24271465;Name=UL16;Note=core gene;locus_tag=HHV1gp00p59
  86. NC_001806.2 GenBank CDS 40821 41489 . - 1 ID=HHV1gp00p57;Dbxref=GeneID:2703371;Name=UL20;Note=type 3 membrane protein%3B 4 transmembrane domains%3B involved in virion morphogenesis%3B involved in membrane fusion;codon_start=1;locus_tag=HHV1gp00p57;product=envelope protein UL20;protein_id=YP_009137094.1;translation=length.222
  87. NC_001806.2 GenBank gene 35024 41489 . - 1 ID=HHV1gp00p57.gene;Alias=HHV1gp00p57;Dbxref=GeneID:2703371;Name=UL20;Note=alpha gene;locus_tag=HHV1gp00p57
  88. NC_001806.2 GenBank CDS 36405 40529 . - 1 ID=HHV1gp00p56;Dbxref=GeneID:2703368;Name=UL19;Note=6 copies form hexons%2C 5 copies form pentons%3B involved in capsid morphogenesis%3B VP5;codon_start=1;locus_tag=HHV1gp00p56;product=major capsid protein;protein_id=YP_009137093.1;translation=length.1374
  89. NC_001806.2 GenBank gene 35024 40529 . - 1 ID=HHV1gp00p56.gene;Alias=HHV1gp00p56;Dbxref=GeneID:2703368;Name=UL19;Note=core gene;locus_tag=HHV1gp00p56
  90. NC_001806.2 GenBank CDS 35096 36052 . - 1 ID=HHV1gp00p58;Dbxref=GeneID:2703366;Name=UL18;Note=complexed 2:1 with capsid triplex subunit 1 to connect capsid hexons and pentons%3B involved in capsid morphogenesis%3B VP23;codon_start=1;locus_tag=HHV1gp00p58;product=capsid triplex subunit 2;protein_id=YP_009137092.1;translation=length.318
  91. NC_001806.2 GenBank regulatory 35024 35029 . - 1 ID=GenBank:regulatory:NC_001806:35024:35029;Note=UL18%2C UL19%2C UL20;regulatory_class=polyA_signal_sequence
  92. NC_001806.2 GenBank regulatory 35028 35033 . - 1 ID=GenBank:regulatory:NC_001806:35028:35033;Note=UL18%2C UL19%2C UL20;regulatory_class=polyA_signal_sequence
  93. NC_001806.2 GenBank gene 35024 36052 . - 1 ID=HHV1gp00p58.gene;Alias=HHV1gp00p58;Dbxref=GeneID:2703366;Name=UL18;Note=core gene;locus_tag=HHV1gp00p58
  94. NC_001806.2 GenBank CDS 42075 43682 . + 1 ID=HHV1gp00p55;Dbxref=GeneID:2703372;Name=UL21;Note=interacts with microtubules%3B involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p55;product=tegument protein UL21;protein_id=YP_009137095.1;translation=length.535
  95. NC_001806.2 GenBank gene 42075 43696 . + 1 ID=HHV1gp00p55.gene;Alias=HHV1gp00p55;Dbxref=GeneID:2703372;Name=UL21;Note=alpha gene;locus_tag=HHV1gp00p55
  96. NC_001806.2 GenBank regulatory 43691 43696 . + 1 Parent=HHV1gp00p55;Name=UL21;locus_tag=HHV1gp00p55;regulatory_class=polyA_signal_sequence
  97. NC_001806.2 GenBank CDS 43867 46383 . - 1 ID=HHV1gp00p54;Dbxref=GeneID:24271466;Name=UL22;Note=type 1 membrane protein%3B contains a signal peptide%3B possible membrane fusogen%3B complexed with envelope glycoprotein L%3B involved in cell entry%3B involved in cell-to-cell spread;codon_start=1;locus_tag=HHV1gp00p54;product=envelope glycoprotein H;protein_id=YP_009137096.1;translation=length.838
  98. NC_001806.2 GenBank gene 43866 46383 . - 1 ID=HHV1gp00p54.gene;Alias=HHV1gp00p54;Dbxref=GeneID:24271466;Name=UL22;Note=core gene;locus_tag=HHV1gp00p54
  99. NC_001806.2 GenBank regulatory 43866 43871 . - 1 Parent=HHV1gp00p54;Name=UL22;locus_tag=HHV1gp00p54;regulatory_class=polyA_signal_sequence
  100. NC_001806.2 GenBank CDS 46673 47803 . - 1 ID=HHV1gp00p53;Dbxref=GeneID:24271467;eC_number=2.7.1.21;Name=UL23;Note=thymidine kinase;codon_start=1;locus_tag=HHV1gp00p53;product=involved in nucleotide metabolism;protein_id=YP_009137097.1;translation=length.376
  101. NC_001806.2 GenBank gene 46609 47803 . - 1 ID=HHV1gp00p53.gene;Alias=HHV1gp00p53;Dbxref=GeneID:24271467;Name=UL23;Note=core gene;locus_tag=HHV1gp00p53
  102. NC_001806.2 GenBank regulatory 46609 46614 . - 1 Parent=HHV1gp00p53;Name=UL23;locus_tag=HHV1gp00p53;regulatory_class=polyA_signal_sequence
  103. NC_001806.2 GenBank regulatory 46622 46627 . - 1 Parent=HHV1gp00p53;Name=UL23;locus_tag=HHV1gp00p53;regulatory_class=polyA_signal_sequence
  104. NC_001806.2 GenBank CDS 47738 48547 . + 1 ID=HHV1gp00p52;Dbxref=GeneID:24271468;Name=UL24;codon_start=1;locus_tag=HHV1gp00p52;product=nuclear protein UL24;protein_id=YP_009137098.1;translation=length.269
  105. NC_001806.2 GenBank gene 47738 52772 . + 1 ID=HHV1gp00p52.gene;Alias=HHV1gp00p52;Dbxref=GeneID:24271468;Name=UL24;Note=core gene;locus_tag=HHV1gp00p52
  106. NC_001806.2 GenBank CDS 48814 50556 . + 1 ID=HHV1gp00p51;Dbxref=GeneID:2703377;Name=UL25;Note=located on capsid near vertices%3B possibly stabilizes the capsid and retains the genome%3B involved in DNA encapsidation;codon_start=1;locus_tag=HHV1gp00p51;product=DNA packaging tegument protein UL25;protein_id=YP_009137099.1;translation=length.580
  107. NC_001806.2 GenBank gene 48814 52772 . + 1 ID=HHV1gp00p51.gene;Alias=HHV1gp00p51;Dbxref=GeneID:2703377;Name=UL25;Note=core gene;locus_tag=HHV1gp00p51
  108. NC_001806.2 GenBank CDS 50810 52717 . + 1 ID=HHV1gp00p50;Dbxref=GeneID:2703453;eC_number=3.4.21.97;Name=UL26;Note=serine protease (N-terminal region)%3B minor scaffold protein (remainder of protein%2C clipped near C terminus)%3B involved in capsid morphogenesis%3B VP24%3B VP21;codon_start=1;locus_tag=HHV1gp00p50;product=capsid maturation protease;protein_id=YP_009137100.1;translation=length.635
  109. NC_001806.2 GenBank gene 50810 52772 . + 1 ID=HHV1gp00p50.gene;Alias=HHV1gp00p50;Dbxref=GeneID:2703453;Name=UL26;Note=core gene;locus_tag=HHV1gp00p50
  110. NC_001806.2 GenBank CDS 51728 52717 . + 1 ID=HHV1gp00p49;Dbxref=GeneID:2703454;Name=UL26.5;Note=clipped near C terminus%3B involved in capsid morphogenesis%3B VP22a;codon_start=1;locus_tag=HHV1gp00p49;product=capsid scaffold protein;protein_id=YP_009137101.1;translation=length.329
  111. NC_001806.2 GenBank regulatory 52767 52772 . + 1 ID=GenBank:regulatory:NC_001806:52767:52772;Note=UL24%2C UL25%2C UL26%2C UL26.5;regulatory_class=polyA_signal_sequence
  112. NC_001806.2 GenBank gene 51728 52772 . + 1 ID=HHV1gp00p49.gene;Alias=HHV1gp00p49;Dbxref=GeneID:2703454;Name=UL26.5;Note=core gene;locus_tag=HHV1gp00p49
  113. NC_001806.2 GenBank CDS 55803 58160 . - 1 ID=HHV1gp00p47;Dbxref=GeneID:2703457;Name=UL28;Note=involved in DNA encapsidation%3B transiently associated with maturing capsids;codon_start=1;locus_tag=HHV1gp00p47;product=DNA packaging terminase subunit 2;protein_id=YP_009137103.1;translation=length.785
  114. NC_001806.2 GenBank gene 53059 58160 . - 1 ID=HHV1gp00p47.gene;Alias=HHV1gp00p47;Dbxref=GeneID:2703457;Name=UL28;Note=core gene;locus_tag=HHV1gp00p47
  115. NC_001806.2 GenBank CDS 53081 55795 . - 1 ID=HHV1gp00p48;Dbxref=GeneID:24271469;Name=UL27;Note=type 1 membrane protein%3B contains a signal peptide%3B possible membrane fusogen%3B binds cell surface heparan sulphate%3B involved in cell entry%3B involved in cell-to-cell spread;codon_start=1;locus_tag=HHV1gp00p48;product=envelope glycoprotein B;protein_id=YP_009137102.1;translation=length.904
  116. NC_001806.2 GenBank regulatory 53059 53064 . - 1 ID=GenBank:regulatory:NC_001806:53059:53064;Note=UL27%2C UL28;regulatory_class=polyA_signal_sequence
  117. NC_001806.2 GenBank gene 53059 55795 . - 1 ID=HHV1gp00p48.gene;Alias=HHV1gp00p48;Dbxref=GeneID:24271469;Name=UL27;Note=core gene;locus_tag=HHV1gp00p48
  118. NC_001806.2 GenBank CDS 58464 62054 . - 1 ID=HHV1gp00p46;Dbxref=GeneID:2703458;Name=UL29;Note=contains a zinc-finger%3B involved in DNA replication%3B possibly involved in gene regulation%3B ICP8;codon_start=1;locus_tag=HHV1gp00p46;product=single-stranded DNA-binding protein;protein_id=YP_009137104.1;translation=length.1196
  119. NC_001806.2 GenBank stem_loop 62404 62547 . + 1 ID=GenBank:stem_loop:NC_001806:62404:62547;Note=oriL palindrome
  120. NC_001806.2 GenBank gene 58410 62054 . - 1 ID=HHV1gp00p46.gene;Alias=HHV1gp00p46;Dbxref=GeneID:2703458;Name=UL29;Note=core gene;locus_tag=HHV1gp00p46
  121. NC_001806.2 GenBank regulatory 58410 58415 . - 1 Parent=HHV1gp00p46;Name=UL29;locus_tag=HHV1gp00p46;regulatory_class=polyA_signal_sequence
  122. NC_001806.2 GenBank CDS 62807 66514 . + 1 ID=HHV1gp00p45;Dbxref=GeneID:2703462;eC_number=2.7.7.7;Name=UL30;Note=involved in DNA replication;codon_start=1;locus_tag=HHV1gp00p45;product=DNA polymerase catalytic subunit;protein_id=YP_009137105.1;translation=length.1235
  123. NC_001806.2 GenBank gene 62807 66553 . + 1 ID=HHV1gp00p45.gene;Alias=HHV1gp00p45;Dbxref=GeneID:2703462;Name=UL30;Note=core gene;locus_tag=HHV1gp00p45
  124. NC_001806.2 GenBank regulatory 66548 66553 . + 1 Parent=HHV1gp00p45;Name=UL30;locus_tag=HHV1gp00p45;regulatory_class=polyA_signal_sequence
  125. NC_001806.2 GenBank CDS 67372 69162 . - 1 ID=HHV1gp00p44;Dbxref=GeneID:2703352;Name=UL32;Note=involved in DNA encapsidation%3B possibly involved in capsid transport;codon_start=1;locus_tag=HHV1gp00p44;product=DNA packaging protein UL32;protein_id=YP_009137107.1;translation=length.596
  126. NC_001806.2 GenBank gene 66377 69162 . - 1 ID=HHV1gp00p44.gene;Alias=HHV1gp00p44;Dbxref=GeneID:2703352;Name=UL32;Note=core gene;locus_tag=HHV1gp00p44
  127. NC_001806.2 GenBank CDS 66459 67379 . - 1 ID=HHV1gp00p43;Dbxref=GeneID:2703350;Name=UL31;Note=interacts with nuclear egress membrane protein%3B involved in nuclear egress;codon_start=1;locus_tag=HHV1gp00p43;product=nuclear egress lamina protein;protein_id=YP_009137106.1;translation=length.306
  128. NC_001806.2 GenBank regulatory 66377 66382 . - 1 ID=GenBank:regulatory:NC_001806:66377:66382;Note=UL31%2C UL32;regulatory_class=polyA_signal_sequence
  129. NC_001806.2 GenBank gene 66377 67379 . - 1 ID=HHV1gp00p43.gene;Alias=HHV1gp00p43;Dbxref=GeneID:2703350;Name=UL31;Note=core gene;locus_tag=HHV1gp00p43
  130. NC_001806.2 GenBank CDS 69161 69553 . + 1 ID=HHV1gp00p42;Dbxref=GeneID:2703353;Name=UL33;Note=interacts with DNA packaging terminase subunit 2%3B involved in DNA encapsidation;codon_start=1;locus_tag=HHV1gp00p42;product=DNA packaging protein UL33;protein_id=YP_009137108.1;translation=length.130
  131. NC_001806.2 GenBank gene 69161 70943 . + 1 ID=HHV1gp00p42.gene;Alias=HHV1gp00p42;Dbxref=GeneID:2703353;Name=UL33;Note=core gene;locus_tag=HHV1gp00p42
  132. NC_001806.2 GenBank CDS 69633 70460 . + 1 ID=HHV1gp00p41;Dbxref=GeneID:2703355;Name=UL34;Note=type 2 membrane protein%3B interacts with nuclear egress lamina protein%3B involved in nuclear egress;codon_start=1;locus_tag=HHV1gp00p41;product=nuclear egress membrane protein;protein_id=YP_009137109.1;translation=length.275
  133. NC_001806.2 GenBank gene 69633 70943 . + 1 ID=HHV1gp00p41.gene;Alias=HHV1gp00p41;Dbxref=GeneID:2703355;Name=UL34;Note=core gene;locus_tag=HHV1gp00p41
  134. NC_001806.2 GenBank CDS 70566 70904 . + 1 ID=HHV1gp00p40;Dbxref=GeneID:2703356;Name=UL35;Note=located externally on capsid hexons%3B involved in capsid morphogenesis%3B possibly involved in capsid transport%3B VP26%3B interacts with dynein;codon_start=1;locus_tag=HHV1gp00p40;product=small capsid protein;protein_id=YP_009137110.1;translation=length.112
  135. NC_001806.2 GenBank regulatory 70938 70943 . + 1 ID=GenBank:regulatory:NC_001806:70938:70943;Note=UL33%2C UL34%2C UL35;regulatory_class=polyA_signal_sequence
  136. NC_001806.2 GenBank gene 70566 70943 . + 1 ID=HHV1gp00p40.gene;Alias=HHV1gp00p40;Dbxref=GeneID:2703356;Name=UL35;Note=core gene;locus_tag=HHV1gp00p40
  137. NC_001806.2 GenBank CDS 71049 80468 . - 1 ID=HHV1gp00p39;Dbxref=GeneID:2703357;Name=UL36;Note=complexed with tegument protein UL37%3B ubiquitin-specific protease (N-terminal region)%3B involved in capsid transport%3B VP1/2;codon_start=1;locus_tag=HHV1gp00p39;product=large tegument protein;protein_id=YP_009137111.1;translation=length.3139
  138. NC_001806.2 GenBank repeat_region 71604 71814 . + 1 ID=GenBank:repeat_region:NC_001806:71604:71814;Note=UL reiteration set 1;rpt_type=direct,tandem;rpt_unit_range=71604..71609
  139. NC_001806.2 GenBank gene 70983 80468 . - 1 ID=HHV1gp00p39.gene;Alias=HHV1gp00p39;Dbxref=GeneID:2703357;Name=UL36;Note=core gene;locus_tag=HHV1gp00p39
  140. NC_001806.2 GenBank regulatory 70983 70988 . - 1 Parent=HHV1gp00p39;Name=UL36;locus_tag=HHV1gp00p39;regulatory_class=polyA_signal_sequence
  141. NC_001806.2 GenBank CDS 80713 84084 . - 1 ID=HHV1gp00p38;Dbxref=GeneID:2703358;Name=UL37;Note=complexed with large tegument protein%3B involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p38;product=tegument protein UL37;protein_id=YP_009137112.1;translation=length.1123
  142. NC_001806.2 GenBank gene 80712 84084 . - 1 ID=HHV1gp00p38.gene;Alias=HHV1gp00p38;Dbxref=GeneID:2703358;Name=UL37;Note=core gene;locus_tag=HHV1gp00p38
  143. NC_001806.2 GenBank regulatory 80712 80717 . - 1 Parent=HHV1gp00p38;Name=UL37;locus_tag=HHV1gp00p38;regulatory_class=polyA_signal_sequence
  144. NC_001806.2 GenBank CDS 84531 85928 . + 1 ID=HHV1gp00p37;Dbxref=GeneID:2703359;Name=UL38;Note=complexed 1:2 with capsid triplex subunit 2 to connect capsid hexons and pentons%3B involved in capsid morphogenesis%3B VP19C;codon_start=1;locus_tag=HHV1gp00p37;product=capsid triplex subunit 1;protein_id=YP_009137113.1;translation=length.465
  145. NC_001806.2 GenBank gene 84531 86021 . + 1 ID=HHV1gp00p37.gene;Alias=HHV1gp00p37;Dbxref=GeneID:2703359;Name=UL38;Note=core gene;locus_tag=HHV1gp00p37
  146. NC_001806.2 GenBank regulatory 86016 86021 . + 1 Parent=HHV1gp00p37;Name=UL38;locus_tag=HHV1gp00p37;regulatory_class=polyA_signal_sequence
  147. NC_001806.2 GenBank CDS 86443 89856 . + 1 ID=HHV1gp00p36;Dbxref=GeneID:2703361;eC_number=1.17.4.1;Name=UL39;Note=involved in nucleotide metabolism%3B translation initiation factor-associated protein (N-terminal region);codon_start=1;locus_tag=HHV1gp00p36;product=ribonucleotide reductase subunit 1;protein_id=YP_009137114.1;translation=length.1137
  148. NC_001806.2 GenBank gene 86443 90987 . + 1 ID=HHV1gp00p36.gene;Alias=HHV1gp00p36;Dbxref=GeneID:2703361;Name=UL39;Note=core gene;locus_tag=HHV1gp00p36
  149. NC_001806.2 GenBank CDS 89925 90947 . + 1 ID=HHV1gp00p35;Dbxref=GeneID:24271470;eC_number=1.17.4.1;Name=UL40;Note=involved in nucleotide metabolism;codon_start=1;locus_tag=HHV1gp00p35;product=ribonucleotide reductase subunit 2;protein_id=YP_009137115.1;translation=length.340
  150. NC_001806.2 GenBank regulatory 90982 90987 . + 1 ID=GenBank:regulatory:NC_001806:90982:90987;Note=UL39%2C UL40;regulatory_class=polyA_signal_sequence
  151. NC_001806.2 GenBank gene 89925 90987 . + 1 ID=HHV1gp00p35.gene;Alias=HHV1gp00p35;Dbxref=GeneID:24271470;Name=UL40;Note=core gene;locus_tag=HHV1gp00p35
  152. NC_001806.2 GenBank CDS 91167 92636 . - 1 ID=HHV1gp00p34;Dbxref=GeneID:2703365;Name=UL41;Note=mRNA-specific RNase%3B involved in cellular mRNA degradation;codon_start=1;locus_tag=HHV1gp00p34;product=tegument host shutoff protein;protein_id=YP_009137116.1;translation=length.489
  153. NC_001806.2 GenBank gene 91115 92636 . - 1 ID=HHV1gp00p34.gene;Alias=HHV1gp00p34;Dbxref=GeneID:2703365;Name=UL41;Note=alpha gene;locus_tag=HHV1gp00p34
  154. NC_001806.2 GenBank regulatory 91115 91120 . - 1 Parent=HHV1gp00p34;Name=UL41;locus_tag=HHV1gp00p34;regulatory_class=polyA_signal_sequence
  155. NC_001806.2 GenBank CDS 93112 94578 . + 1 ID=HHV1gp00p33;Dbxref=GeneID:24271471;Name=UL42;Note=dsDNA-binding protein%3B involved in DNA replication;codon_start=1;locus_tag=HHV1gp00p33;product=DNA polymerase processivity subunit;protein_id=YP_009137117.1;translation=length.488
  156. NC_001806.2 GenBank gene 93112 94637 . + 1 ID=HHV1gp00p33.gene;Alias=HHV1gp00p33;Dbxref=GeneID:24271471;Name=UL42;Note=alpha gene;locus_tag=HHV1gp00p33
  157. NC_001806.2 GenBank regulatory 94632 94637 . + 1 Parent=HHV1gp00p33;Name=UL42;locus_tag=HHV1gp00p33;regulatory_class=polyA_signal_sequence
  158. NC_001806.2 GenBank CDS 94799 96052 . + 1 ID=HHV1gp00p32;Dbxref=GeneID:2703408;Name=UL43;Note=type 3 membrane protein%3B possibly involved in membrane fusion%3B 11 transmembrane domains;codon_start=1;locus_tag=HHV1gp00p32;product=envelope protein UL43;protein_id=YP_009137118.1;translation=length.417
  159. NC_001806.2 GenBank gene 94799 96068 . + 1 ID=HHV1gp00p32.gene;Alias=HHV1gp00p32;Dbxref=GeneID:2703408;Name=UL43;Note=core gene;locus_tag=HHV1gp00p32
  160. NC_001806.2 GenBank regulatory 96063 96068 . + 1 Parent=HHV1gp00p32;Name=UL43;locus_tag=HHV1gp00p32;regulatory_class=polyA_signal_sequence
  161. NC_001806.2 GenBank CDS 96312 97847 . + 1 ID=HHV1gp00p31;Dbxref=GeneID:2703410;Name=UL44;Note=type 1 membrane protein%3B contains a signal peptide%3B binds cell surface heparan sulphate%3B binds complement C3b to block neutralization%3B involved in cell attachment;codon_start=1;locus_tag=HHV1gp00p31;product=envelope glycoprotein C;protein_id=YP_009137119.1;translation=length.511
  162. NC_001806.2 GenBank gene 96312 98669 . + 1 ID=HHV1gp00p31.gene;Alias=HHV1gp00p31;Dbxref=GeneID:2703410;Name=UL44;Note=alpha gene;locus_tag=HHV1gp00p31
  163. NC_001806.2 GenBank CDS 98033 98551 . + 1 ID=HHV1gp00p30;Dbxref=GeneID:24271472;Name=UL45;Note=type 2 membrane protein%3B tegument-associated%3B possibly involved in membrane fusion;codon_start=1;locus_tag=HHV1gp00p30;product=membrane protein UL45;protein_id=YP_009137120.1;translation=length.172
  164. NC_001806.2 GenBank regulatory 98664 98669 . + 1 ID=GenBank:regulatory:NC_001806:98664:98669;Note=UL44%2C UL45;regulatory_class=polyA_signal_sequence
  165. NC_001806.2 GenBank gene 98033 98669 . + 1 ID=HHV1gp00p30.gene;Alias=HHV1gp00p30;Dbxref=GeneID:24271472;Name=UL45;Note=alpha gene;locus_tag=HHV1gp00p30
  166. NC_001806.2 GenBank CDS 101036 103117 . - 1 ID=HHV1gp00p28;Dbxref=GeneID:2703415;Name=UL47;Note=modulates transactivating tegument protein VP16%3B RNA-binding protein%3B possibly involved in gene regulation;codon_start=1;locus_tag=HHV1gp00p28;product=tegument protein VP13/14;protein_id=YP_009137122.1;translation=length.693
  167. NC_001806.2 GenBank gene 98727 103117 . - 1 ID=HHV1gp00p28.gene;Alias=HHV1gp00p28;Dbxref=GeneID:2703415;Name=UL47;Note=alpha gene;locus_tag=HHV1gp00p28
  168. NC_001806.2 GenBank CDS 98797 100953 . - 1 ID=HHV1gp00p29;Dbxref=GeneID:2703413;Name=UL46;Note=modulates transactivating tegument protein VP16%3B possibly involved in gene regulation;codon_start=1;locus_tag=HHV1gp00p29;product=tegument protein VP11/12;protein_id=YP_009137121.1;translation=length.718
  169. NC_001806.2 GenBank regulatory 98727 98732 . - 1 ID=GenBank:regulatory:NC_001806:98727:98732;Note=UL46%2C UL47;regulatory_class=polyA_signal_sequence
  170. NC_001806.2 GenBank gene 98727 100953 . - 1 ID=HHV1gp00p29.gene;Alias=HHV1gp00p29;Dbxref=GeneID:2703413;Name=UL46;Note=alpha gene;locus_tag=HHV1gp00p29
  171. NC_001806.2 GenBank CDS 103608 105080 . - 1 ID=HHV1gp00p27;Dbxref=GeneID:24271473;Name=UL48;Note=transactivates immediate early genes%3B involved in gene regulation%3B involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p27;product=transactivating tegument protein VP16;protein_id=YP_009137123.1;translation=length.490
  172. NC_001806.2 GenBank gene 103538 105080 . - 1 ID=HHV1gp00p27.gene;Alias=HHV1gp00p27;Dbxref=GeneID:24271473;Name=UL48;Note=alpha gene;locus_tag=HHV1gp00p27
  173. NC_001806.2 GenBank regulatory 103538 103543 . - 1 Parent=HHV1gp00p27;Name=UL48;locus_tag=HHV1gp00p27;regulatory_class=polyA_signal_sequence
  174. NC_001806.2 GenBank CDS 106719 106994 . - 1 ID=HHV1gp00p26;Dbxref=GeneID:2703419;Name=UL49A;Note=type 1 membrane protein%3B contains a signal peptide%3B complexed with envelope glycoprotein M%3B involved in virion morphogenesis%3B involved in membrane fusion%3B not glycosylated;codon_start=1;locus_tag=HHV1gp00p26;product=envelope glycoprotein N;protein_id=YP_009137125.1;translation=length.91
  175. NC_001806.2 GenBank gene 105463 106994 . - 1 ID=HHV1gp00p26.gene;Alias=HHV1gp00p26;Dbxref=GeneID:2703419;Name=UL49A;Note=core gene;locus_tag=HHV1gp00p26
  176. NC_001806.2 GenBank CDS 105487 106392 . - 1 ID=HHV1gp00p25;Dbxref=GeneID:2703417;Name=UL49;Note=involved in virion morphogenesis%3B possibly involved in RNA transport to uninfected cells;codon_start=1;locus_tag=HHV1gp00p25;product=tegument protein VP22;protein_id=YP_009137124.1;translation=length.301
  177. NC_001806.2 GenBank regulatory 105463 105468 . - 1 ID=GenBank:regulatory:NC_001806:105463:105468;Note=UL49%2C UL49A;regulatory_class=polyA_signal_sequence
  178. NC_001806.2 GenBank gene 105463 106392 . - 1 ID=HHV1gp00p25.gene;Alias=HHV1gp00p25;Dbxref=GeneID:2703417;Name=UL49;locus_tag=HHV1gp00p25
  179. NC_001806.2 GenBank CDS 107011 108126 . + 1 ID=HHV1gp00p24;Dbxref=GeneID:2703421;eC_number=3.6.1.23;Name=UL50;Note=involved in nucleotide metabolism%3B DURP family;codon_start=1;locus_tag=HHV1gp00p24;product=deoxyuridine triphosphatase;protein_id=YP_009137126.1;translation=length.371
  180. NC_001806.2 GenBank gene 107011 108158 . + 1 ID=HHV1gp00p24.gene;Alias=HHV1gp00p24;Dbxref=GeneID:2703421;Name=UL50;Note=core gene;locus_tag=HHV1gp00p24
  181. NC_001806.2 GenBank regulatory 108153 108158 . + 1 Parent=HHV1gp00p24;Name=UL50;locus_tag=HHV1gp00p24;regulatory_class=polyA_signal_sequence
  182. NC_001806.2 GenBank CDS 108278 109012 . - 1 ID=HHV1gp00p23;Dbxref=GeneID:2703422;Name=UL51;Note=involved in virion morphogenesis;codon_start=1;locus_tag=HHV1gp00p23;product=tegument protein UL51;protein_id=YP_009137127.1;translation=length.244
  183. NC_001806.2 GenBank gene 108277 109012 . - 1 ID=HHV1gp00p23.gene;Alias=HHV1gp00p23;Dbxref=GeneID:2703422;Name=UL51;Note=core gene;locus_tag=HHV1gp00p23
  184. NC_001806.2 GenBank regulatory 108277 108282 . - 1 Parent=HHV1gp00p23;Name=UL51;locus_tag=HHV1gp00p23;regulatory_class=polyA_signal_sequence
  185. NC_001806.2 GenBank CDS 109049 112225 . + 1 ID=HHV1gp00p22;Dbxref=GeneID:2703423;Name=UL52;Note=involved in DNA replication;codon_start=1;locus_tag=HHV1gp00p22;product=helicase-primase primase subunit;protein_id=YP_009137128.1;translation=length.1058
  186. NC_001806.2 GenBank gene 109049 113449 . + 1 ID=HHV1gp00p22.gene;Alias=HHV1gp00p22;Dbxref=GeneID:2703423;Name=UL52;Note=core gene;locus_tag=HHV1gp00p22
  187. NC_001806.2 GenBank CDS 112180 113196 . + 1 ID=HHV1gp00p21;Dbxref=GeneID:2703425;Name=UL53;Note=type 3 membrane protein%3B contains a signal peptide%3B 4 transmembrane domains%3B involved in virion morphogenesis%3B involved in membrane fusion;codon_start=1;locus_tag=HHV1gp00p21;product=envelope glycoprotein K;protein_id=YP_009137129.1;translation=length.338
  188. NC_001806.2 GenBank regulatory 113444 113449 . + 1 ID=GenBank:regulatory:NC_001806:113444:113449;Note=UL52%2C UL53;regulatory_class=polyA_signal_sequence
  189. NC_001806.2 GenBank gene 112180 113449 . + 1 ID=HHV1gp00p21.gene;Alias=HHV1gp00p21;Dbxref=GeneID:2703425;Name=UL53;Note=alpha gene;locus_tag=HHV1gp00p21
  190. NC_001806.2 GenBank CDS 113735 115273 . + 1 ID=HHV1gp00p20;Dbxref=GeneID:24271474;Name=UL54;Note=RNA-binding protein%3B shuttles between nucleus and cytoplasm%3B inhibits pre-mRNA splicing%3B exports virus mRNA from nucleus%3B exerts most effects post-transcriptionally%3B involved in gene regulation%3B involved in RNA metabolism and transport%3B ICP27%3B MER family;codon_start=1;locus_tag=HHV1gp00p20;product=multifunctional expression regulator;protein_id=YP_009137130.1;translation=length.512
  191. NC_001806.2 GenBank gene 113735 115283 . + 1 ID=HHV1gp00p20.gene;Alias=HHV1gp00p20;Dbxref=GeneID:24271474;Name=UL54;Note=core gene%3B immediate early gene;locus_tag=HHV1gp00p20
  192. NC_001806.2 GenBank regulatory 115278 115283 . + 1 Parent=HHV1gp00p20;Name=UL54;locus_tag=HHV1gp00p20;regulatory_class=polyA_signal_sequence
  193. NC_001806.2 GenBank CDS 115497 116057 . + 1 ID=HHV1gp00p19;Dbxref=GeneID:2703427;Name=UL55;codon_start=1;locus_tag=HHV1gp00p19;product=nuclear protein UL55;protein_id=YP_009137131.1;translation=length.186
  194. NC_001806.2 GenBank gene 115497 116104 . + 1 ID=HHV1gp00p19.gene;Alias=HHV1gp00p19;Dbxref=GeneID:2703427;Name=UL55;locus_tag=HHV1gp00p19
  195. NC_001806.2 GenBank regulatory 116099 116104 . + 1 Parent=HHV1gp00p19;Name=UL55;locus_tag=HHV1gp00p19;regulatory_class=polyA_signal_sequence
  196. NC_001806.2 GenBank CDS 116222 116926 . - 1 ID=HHV1gp00p18;Dbxref=GeneID:2703428;Name=UL56;Note=type 2 membrane protein%3B possibly involved in vesicular trafficking%3B UL56 family;codon_start=1;locus_tag=HHV1gp00p18;product=membrane protein UL56;protein_id=YP_009137132.1;translation=length.234
  197. NC_001806.2 GenBank repeat_region 117160 117341 . + 1 ID=GenBank:repeat_region:NC_001806:117160:117341;Note=RL reiteration set 1;rpt_type=direct,tandem;rpt_unit_range=117160..117176
  198. NC_001806.2 GenBank repeat_region 117161 126373 . + 1 ID=GenBank:repeat_region:NC_001806:117161:126373;Note=IRL%3B inverted repeat flanking UL;rpt_type=inverted
  199. NC_001806.2 GenBank repeat_region 117548 117568 . + 1 ID=GenBank:repeat_region:NC_001806:117548:117568;Note=RL reiteration set 2;rpt_type=direct,tandem;rpt_unit_range=117548..117550
  200. NC_001806.2 GenBank repeat_region 117789 117820 . + 1 ID=GenBank:repeat_region:NC_001806:117789:117820;Note=RL reiteration set 3;rpt_type=direct,tandem;rpt_unit_range=117789..117793
  201. NC_001806.2 GenBank gene 116197 116926 . - 1 ID=HHV1gp00p18.gene;Alias=HHV1gp00p18;Dbxref=GeneID:2703428;Name=UL56;Note=alpha gene;locus_tag=HHV1gp00p18
  202. NC_001806.2 GenBank regulatory 116197 116202 . - 1 Parent=HHV1gp00p18;Name=UL56;locus_tag=HHV1gp00p18;regulatory_class=polyA_signal_sequence
  203. NC_001806.2 GenBank regulatory 116201 116206 . - 1 Parent=HHV1gp00p18;Name=UL56;locus_tag=HHV1gp00p18;regulatory_class=polyA_signal_sequence
  204. NC_001806.2 GenBank repeat_region 120496 120642 . + 1 ID=GenBank:repeat_region:NC_001806:120496:120642;Note=RL reiteration set 4;rpt_type=direct,tandem;rpt_unit_range=120496..120511
  205. NC_001806.2 GenBank gene 118777 127151 . + 1 ID=HHV1gp00s02;Dbxref=GeneID:24271497;Name=LAT;locus_tag=HHV1gp00s02
  206. NC_001806.2 GenBank ncRNA 118805 127151 . + 1 ID=HHV1gp00s02.r01;Parent=HHV1gp00s02;Dbxref=GeneID:24271497;Name=LAT;locus_tag=HHV1gp00s02;ncRNA_class=other;product=LAT
  207. NC_001806.2 GenBank regulatory 118777 118782 . + 1 Parent=HHV1gp00s02;Name=LAT;locus_tag=HHV1gp00s02;regulatory_class=TATA_box
  208. NC_001806.2 GenBank regulatory 127146 127151 . + 1 Parent=HHV1gp00s02;Name=LAT;locus_tag=HHV1gp00s02;regulatory_class=polyA_signal_sequence
  209. NC_001806.2 GenBank exon 118805 119464 . + 1 Parent=HHV1gp00s02.r01;Name=LAT;locus_tag=HHV1gp00s02
  210. NC_001806.2 GenBank exon 121421 127151 . + 1 Parent=HHV1gp00s02.r01;Name=LAT;locus_tag=HHV1gp00s02
  211. NC_001806.2 GenBank repeat_region 123750 123908 . + 1 ID=GenBank:repeat_region:NC_001806:123750:123908;Note=RL reiteration set 5;rpt_type=direct,tandem;rpt_unit_range=123750..123806
  212. NC_001806.2 GenBank gene 120675 124287 . - 1 ID=HHV1gp00p17;Dbxref=GeneID:2703390;Name=RL2;Note=immediate early gene;locus_tag=HHV1gp00p17
  213. NC_001806.2 GenBank mRNA 120675 124287 . - 1 ID=HHV1gp00p17.t01;Parent=HHV1gp00p17;Dbxref=GeneID:2703390;Name=RL2;locus_tag=HHV1gp00p17;product=ubiquitin E3 ligase ICP0
  214. NC_001806.2 GenBank regulatory 120692 120697 . - 1 Parent=HHV1gp00p17;Name=RL2;locus_tag=HHV1gp00p17;regulatory_class=polyA_signal_sequence
  215. NC_001806.2 GenBank regulatory 124282 124287 . - 1 Parent=HHV1gp00p17;Name=RL2;locus_tag=HHV1gp00p17;regulatory_class=TATA_box
  216. NC_001806.2 GenBank CDS 120884 122488 . - 1 ID=HHV1gp00p17.p01;Parent=HHV1gp00p17.t01;Dbxref=GeneID:2703390;Name=RL2;Note=ubiquitin E3 ligase ICP0;codon_start=1;locus_tag=HHV1gp00p17;product=contains a RING finger%3B disrupts ND10%3B proteasome-dependent degradation of several cellular proteins%3B involved in gene regulation%3B involved in cellular protein degradation%3B involved in latency;protein_id=YP_009137133.1;translation=length.775
  217. NC_001806.2 GenBank CDS 122625 123290 . - 1 ID=HHV1gp00p17.p01;Parent=HHV1gp00p17.t01;Dbxref=GeneID:2703390;Name=RL2;Note=ubiquitin E3 ligase ICP0;codon_start=1;locus_tag=HHV1gp00p17;product=contains a RING finger%3B disrupts ND10%3B proteasome-dependent degradation of several cellular proteins%3B involved in gene regulation%3B involved in cellular protein degradation%3B involved in latency;protein_id=YP_009137133.1;translation=length.775
  218. NC_001806.2 GenBank CDS 124056 124112 . - 1 ID=HHV1gp00p17.p01;Parent=HHV1gp00p17.t01;Dbxref=GeneID:2703390;Name=RL2;Note=ubiquitin E3 ligase ICP0;codon_start=1;locus_tag=HHV1gp00p17;product=contains a RING finger%3B disrupts ND10%3B proteasome-dependent degradation of several cellular proteins%3B involved in gene regulation%3B involved in cellular protein degradation%3B involved in latency;protein_id=YP_009137133.1;translation=length.775
  219. NC_001806.2 GenBank exon 120675 122487 . - 1 Parent=HHV1gp00p17.t01;Name=RL2;locus_tag=HHV1gp00p17
  220. NC_001806.2 GenBank exon 122624 123290 . - 1 Parent=HHV1gp00p17.t01;Name=RL2;locus_tag=HHV1gp00p17
  221. NC_001806.2 GenBank exon 124056 124287 . - 1 Parent=HHV1gp00p17.t01;Name=RL2;locus_tag=HHV1gp00p17
  222. NC_001806.2 GenBank CDS 125115 125861 . - 1 ID=HHV1gp00p16;Dbxref=GeneID:2703396;Name=RL1;Note=virion protein%3B inhibits stress-induced translational arrest%3B related to eIF2 phosphatase regulatory subunit GADD34%3B binds protein phosphatase 1 to form a holoenzyme capable of dephosphorylating eIF2-alpha%3B involved in translational regulation;codon_start=1;locus_tag=HHV1gp00p16;product=neurovirulence protein ICP34.5;protein_id=YP_009137134.1;translation=length.248
  223. NC_001806.2 GenBank repeat_region 125334 125386 . + 1 ID=GenBank:repeat_region:NC_001806:125334:125386;Note=RL reiteration set 6;rpt_type=direct,tandem;rpt_unit_range=125334..125342
  224. NC_001806.2 GenBank repeat_region 125975 132607 . + 1 ID=GenBank:repeat_region:NC_001806:125975:132607;Note=IRS%3B inverted repeat flanking US;rpt_type=inverted
  225. NC_001806.2 GenBank repeat_region 125975 126373 . + 1 ID=GenBank:repeat_region:NC_001806:125975:126373;Note='a' sequence;rpt_type=inverted
  226. NC_001806.2 GenBank repeat_region 126054 126276 . + 1 ID=GenBank:repeat_region:NC_001806:126054:126276;Note='a' sequence reiteration set;rpt_type=direct,tandem;rpt_unit_range=126054..126065
  227. NC_001806.2 GenBank repeat_region 126573 126712 . + 1 ID=GenBank:repeat_region:NC_001806:126573:126712;Note=RS reiteration set 1;rpt_type=direct,tandem;rpt_unit_range=126573..126588
  228. NC_001806.2 GenBank repeat_region 126813 127145 . + 1 ID=GenBank:repeat_region:NC_001806:126813:127145;Note=RS reiteration set 2;rpt_type=direct,tandem;rpt_unit_range=126813..126829
  229. NC_001806.2 GenBank gene 124834 125861 . - 1 ID=HHV1gp00p16.gene;Alias=HHV1gp00p16;Dbxref=GeneID:2703396;Name=RL1;locus_tag=HHV1gp00p16
  230. NC_001806.2 GenBank regulatory 124834 124839 . - 1 Parent=HHV1gp00p16;Name=RL1;locus_tag=HHV1gp00p16;regulatory_class=polyA_signal_sequence
  231. NC_001806.2 GenBank stem_loop 131980 132024 . + 1 ID=GenBank:stem_loop:NC_001806:131980:132024;Note=oriS palindrome
  232. NC_001806.2 GenBank gene 127173 131460 . - 1 ID=HHV1gp00p15;Dbxref=GeneID:2703392;Name=RS1;Note=alpha gene%3B immediate early gene;locus_tag=HHV1gp00p15
  233. NC_001806.2 GenBank mRNA 127173 131431 . - 1 ID=HHV1gp00p15.t01;Parent=HHV1gp00p15;Dbxref=GeneID:2703392;Name=RS1;locus_tag=HHV1gp00p15;product=transcriptional regulator ICP4
  234. NC_001806.2 GenBank regulatory 127187 127192 . - 1 Parent=HHV1gp00p15;Name=RS1;locus_tag=HHV1gp00p15;regulatory_class=polyA_signal_sequence
  235. NC_001806.2 GenBank regulatory 131455 131460 . - 1 Parent=HHV1gp00p15;Name=RS1;locus_tag=HHV1gp00p15;regulatory_class=TATA_box
  236. NC_001806.2 GenBank CDS 127235 131131 . - 1 ID=HHV1gp00p15.p01;Parent=HHV1gp00p15.t01;Dbxref=GeneID:2703392;Name=RS1;Note=involved in gene regulation;codon_start=1;locus_tag=HHV1gp00p15;product=transcriptional regulator ICP4;protein_id=YP_009137135.1;translation=length.1298
  237. NC_001806.2 GenBank exon 127173 131431 . - 1 Parent=HHV1gp00p15.t01;Name=RS1;locus_tag=HHV1gp00p15
  238. NC_001806.2 GenBank region 132608 145589 . + 1 ID=GenBank:region:NC_001806:132608:145589;Note=US%3B short unique region
  239. NC_001806.2 GenBank gene 132101 133963 . + 1 ID=HHV1gp00p14;Dbxref=GeneID:2703435;Name=US1;Note=immediate early gene;locus_tag=HHV1gp00p14
  240. NC_001806.2 GenBank gene_component_region 132391 132516 . + 1 Parent=HHV1gp00p14;Name=US1;Note=IRS reiteration set 3;locus_tag=HHV1gp00p14;rpt_type=direct,tandem;rpt_unit_range=132391..132413
  241. NC_001806.2 GenBank mRNA 132129 133960 . + 1 ID=HHV1gp00p14.t01;Parent=HHV1gp00p14;Dbxref=GeneID:2703435;Name=US1;locus_tag=HHV1gp00p14;product=regulatory protein ICP22
  242. NC_001806.2 GenBank regulatory 132101 132106 . + 1 Parent=HHV1gp00p14;Name=US1;locus_tag=HHV1gp00p14;regulatory_class=TATA_box
  243. NC_001806.2 GenBank regulatory 133944 133949 . + 1 Parent=HHV1gp00p14;Name=US1;locus_tag=HHV1gp00p14;regulatory_class=polyA_signal_sequence
  244. NC_001806.2 GenBank CDS 132647 133909 . + 1 ID=HHV1gp00p14.p01;Parent=HHV1gp00p14.t01;Dbxref=GeneID:2703435;Name=US1;Note=required for expression of a subset of late genes%3B involved in gene regulation%3B involved in cell cycle regulation;codon_start=1;locus_tag=HHV1gp00p14;product=regulatory protein ICP22;protein_id=YP_009137136.1;translation=length.420
  245. NC_001806.2 GenBank exon 132129 132375 . + 1 Parent=HHV1gp00p14.t01;Name=US1;locus_tag=HHV1gp00p14
  246. NC_001806.2 GenBank exon 132544 133960 . + 1 Parent=HHV1gp00p14.t01;Name=US1;locus_tag=HHV1gp00p14
  247. NC_001806.2 GenBank gene 134026 135336 . - 1 ID=HHV1gp00p13;Dbxref=GeneID:2703399;Name=US2;Note=alpha gene;locus_tag=HHV1gp00p13
  248. NC_001806.2 GenBank mRNA 134026 135307 . - 1 ID=HHV1gp00p13.t01;Parent=HHV1gp00p13;Dbxref=GeneID:2703399;Name=US2;locus_tag=HHV1gp00p13;product=virion protein US2
  249. NC_001806.2 GenBank regulatory 134039 134044 . - 1 Parent=HHV1gp00p13;Name=US2;locus_tag=HHV1gp00p13;regulatory_class=polyA_signal_sequence
  250. NC_001806.2 GenBank regulatory 135331 135336 . - 1 Parent=HHV1gp00p13;Name=US2;locus_tag=HHV1gp00p13;regulatory_class=TATA_box
  251. NC_001806.2 GenBank CDS 134056 134931 . - 1 ID=HHV1gp00p13.p01;Parent=HHV1gp00p13.t01;Dbxref=GeneID:2703399;Name=US2;Note=possibly envelope-associated%3B interacts with cytokeratin 18;codon_start=1;locus_tag=HHV1gp00p13;product=virion protein US2;protein_id=YP_009137137.1;translation=length.291
  252. NC_001806.2 GenBank exon 134026 135307 . - 1 Parent=HHV1gp00p13.t01;Name=US2;locus_tag=HHV1gp00p13
  253. NC_001806.2 GenBank gene 134937 137534 . + 1 ID=HHV1gp00p12;Dbxref=GeneID:2703401;Name=US3;Note=alpha gene;locus_tag=HHV1gp00p12
  254. NC_001806.2 GenBank mRNA 134967 137534 . + 1 ID=HHV1gp00p12.t01;Parent=HHV1gp00p12;Dbxref=GeneID:2703401;Name=US3;locus_tag=HHV1gp00p12;product=serine/threonine protein kinase US3
  255. NC_001806.2 GenBank mRNA 135192 137534 . + 1 ID=HHV1gp00p12.t02;Parent=HHV1gp00p12;Dbxref=GeneID:2703401;Name=US3;locus_tag=HHV1gp00p12;product=serine/threonine protein kinase US3
  256. NC_001806.2 GenBank regulatory 134937 134942 . + 1 Parent=HHV1gp00p12;Name=US3;locus_tag=HHV1gp00p12;regulatory_class=TATA_box
  257. NC_001806.2 GenBank regulatory 135166 135171 . + 1 Parent=HHV1gp00p12;Name=US3;locus_tag=HHV1gp00p12;regulatory_class=TATA_box
  258. NC_001806.2 GenBank CDS 135225 136670 . + 1 ID=HHV1gp00p12.p01;Parent=HHV1gp00p12.t01;Dbxref=GeneID:2703401;Name=US3;Note=tegument protein%3B phosphorylates nuclear egress lamina protein%3B mediates phosphorylation of HDAC1 and HDAC2 and other cellular and viral proteins%3B involved in protein phosphorylation%3B involved in apoptosis%3B involved in nuclear egress%3B PK family;codon_start=1;locus_tag=HHV1gp00p12;product=serine/threonine protein kinase US3;protein_id=YP_009137138.1;translation=length.481
  259. NC_001806.2 GenBank exon 134967 137534 . + 1 Parent=HHV1gp00p12.t01;Name=US3;locus_tag=HHV1gp00p12
  260. NC_001806.2 GenBank exon 135192 137534 . + 1 Parent=HHV1gp00p12.t02;Name=US3;locus_tag=HHV1gp00p12
  261. NC_001806.2 GenBank regulatory 137511 137516 . + 1 ID=GenBank:regulatory:NC_001806:137511:137516;Note=US3%2C US4;regulatory_class=polyA_signal_sequence
  262. NC_001806.2 GenBank gene 136705 137534 . + 1 ID=HHV1gp00p11;Dbxref=GeneID:2703404;Name=US4;Note=alpha gene;locus_tag=HHV1gp00p11
  263. NC_001806.2 GenBank mRNA 136732 137534 . + 1 ID=HHV1gp00p11.t01;Parent=HHV1gp00p11;Dbxref=GeneID:2703404;Name=US4;locus_tag=HHV1gp00p11;product=envelope glycoprotein G
  264. NC_001806.2 GenBank regulatory 136705 136710 . + 1 Parent=HHV1gp00p11;Name=US4;locus_tag=HHV1gp00p11;regulatory_class=TATA_box
  265. NC_001806.2 GenBank CDS 136747 137463 . + 1 ID=HHV1gp00p11.p01;Parent=HHV1gp00p11.t01;Dbxref=GeneID:2703404;Name=US4;Note=type 1 membrane protein%3B contains a signal peptide%3B involved in cell-to-cell spread%3B involved in apical spread%3B gD family;codon_start=1;locus_tag=HHV1gp00p11;product=envelope glycoprotein G;protein_id=YP_009137139.1;translation=length.238
  266. NC_001806.2 GenBank exon 136732 137534 . + 1 Parent=HHV1gp00p11.t01;Name=US4;locus_tag=HHV1gp00p11
  267. NC_001806.2 GenBank gene 137599 141052 . + 1 ID=HHV1gp00p10;Dbxref=GeneID:2703406;Name=US5;Note=alpha gene;locus_tag=HHV1gp00p10
  268. NC_001806.2 GenBank mRNA 137621 141052 . + 1 ID=HHV1gp00p10.t01;Parent=HHV1gp00p10;Dbxref=GeneID:2703406;Name=US5;locus_tag=HHV1gp00p10;product=envelope glycoprotein J
  269. NC_001806.2 GenBank regulatory 137599 137604 . + 1 Parent=HHV1gp00p10;Name=US5;locus_tag=HHV1gp00p10;regulatory_class=TATA_box
  270. NC_001806.2 GenBank CDS 137734 138012 . + 1 ID=HHV1gp00p10.p01;Parent=HHV1gp00p10.t01;Dbxref=GeneID:2703406;Name=US5;Note=type 1 membrane protein%3B contains a signal peptide;codon_start=1;locus_tag=HHV1gp00p10;product=envelope glycoprotein J;protein_id=YP_009137140.1;translation=length.92
  271. NC_001806.2 GenBank exon 137621 141052 . + 1 Parent=HHV1gp00p10.t01;Name=US5;locus_tag=HHV1gp00p10
  272. NC_001806.2 GenBank gene 138313 141052 . + 1 ID=HHV1gp00p09;Dbxref=GeneID:2703444;Name=US6;Note=alpha gene;locus_tag=HHV1gp00p09
  273. NC_001806.2 GenBank mRNA 138337 141052 . + 1 ID=HHV1gp00p09.t01;Parent=HHV1gp00p09;Dbxref=GeneID:2703444;Name=US6;locus_tag=HHV1gp00p09;product=envelope glycoprotein D
  274. NC_001806.2 GenBank regulatory 138313 138318 . + 1 Parent=HHV1gp00p09;Name=US6;locus_tag=HHV1gp00p09;regulatory_class=TATA_box
  275. NC_001806.2 GenBank CDS 138423 139607 . + 1 ID=HHV1gp00p09.p01;Parent=HHV1gp00p09.t01;Dbxref=GeneID:2703444;Name=US6;Note=type 1 membrane protein%3B contains a signal peptide%3B binds cell surface receptors%3B involved in cell attachment%3B gD family;codon_start=1;locus_tag=HHV1gp00p09;product=envelope glycoprotein D;protein_id=YP_009137141.1;translation=length.394
  276. NC_001806.2 GenBank exon 138337 141052 . + 1 Parent=HHV1gp00p09.t01;Name=US6;locus_tag=HHV1gp00p09
  277. NC_001806.2 GenBank regulatory 141017 141022 . + 1 ID=GenBank:regulatory:NC_001806:141017:141022;Note=US5%2C US6%2C US7;regulatory_class=polyA_signal_sequence
  278. NC_001806.2 GenBank gene 139670 141052 . + 1 ID=HHV1gp00p08;Dbxref=GeneID:2703446;Name=US7;Note=alpha gene;locus_tag=HHV1gp00p08
  279. NC_001806.2 GenBank mRNA 139698 141052 . + 1 ID=HHV1gp00p08.t01;Parent=HHV1gp00p08;Dbxref=GeneID:2703446;Name=US7;locus_tag=HHV1gp00p08;product=envelope glycoprotein I
  280. NC_001806.2 GenBank regulatory 139672 139677 . + 1 Parent=HHV1gp00p08;Name=US7;locus_tag=HHV1gp00p08;regulatory_class=TATA_box
  281. NC_001806.2 GenBank CDS 139789 140961 . + 1 ID=HHV1gp00p08.p01;Parent=HHV1gp00p08.t01;Dbxref=GeneID:2703446;Name=US7;Note=type 1 membrane protein%3B contains a signal peptide%3B complexed with envelope glycoprotein E to form an Fc-receptor%3B involved in cell-to-cell spread%3B involved in basolateral spread%3B gD family;codon_start=1;locus_tag=HHV1gp00p08;product=envelope glycoprotein I;protein_id=YP_009137142.1;translation=length.390
  282. NC_001806.2 GenBank exon 139698 141052 . + 1 Parent=HHV1gp00p08.t01;Name=US7;locus_tag=HHV1gp00p08
  283. NC_001806.2 GenBank gene 141143 143697 . + 1 ID=HHV1gp00p07;Dbxref=GeneID:2703448;Name=US8;Note=alpha gene;locus_tag=HHV1gp00p07
  284. NC_001806.2 GenBank mRNA 141175 143697 . + 1 ID=HHV1gp00p07.t01;Parent=HHV1gp00p07;Dbxref=GeneID:2703448;Name=US8;locus_tag=HHV1gp00p07;product=envelope glycoprotein E
  285. NC_001806.2 GenBank regulatory 141143 141148 . + 1 Parent=HHV1gp00p07;Name=US8;locus_tag=HHV1gp00p07;regulatory_class=TATA_box
  286. NC_001806.2 GenBank CDS 141247 142899 . + 1 ID=HHV1gp00p07.p01;Parent=HHV1gp00p07.t01;Dbxref=GeneID:2703448;Name=US8;Note=type 1 membrane protein%3B contains a signal peptide%3B complexed with envelope glycoprotein I to form an Fc-receptor%3B involved in cell-to-cell spread%3B involved in basolateral spread%3B gE family;codon_start=1;locus_tag=HHV1gp00p07;product=envelope glycoprotein E;protein_id=YP_009137143.1;translation=length.550
  287. NC_001806.2 GenBank exon 141175 143697 . + 1 Parent=HHV1gp00p07.t01;Name=US8;locus_tag=HHV1gp00p07
  288. NC_001806.2 GenBank CDS 142748 143227 . + 1 ID=HHV1gp00p06;Dbxref=GeneID:2703450;Name=US8A;Note=type 2 membrane protein;codon_start=1;locus_tag=HHV1gp00p06;product=membrane protein US8A;protein_id=YP_009137144.1;translation=length.159
  289. NC_001806.2 GenBank gene 142748 143697 . + 1 ID=HHV1gp00p06.gene;Alias=HHV1gp00p06;Dbxref=GeneID:2703450;Name=US8A;Note=alpha gene;locus_tag=HHV1gp00p06
  290. NC_001806.2 GenBank regulatory 143672 143677 . + 1 ID=GenBank:regulatory:NC_001806:143672:143677;Note=US8%2C US8A%2C US9;regulatory_class=polyA_signal_sequence
  291. NC_001806.2 GenBank repeat_region 143716 143868 . + 1 ID=GenBank:repeat_region:NC_001806:143716:143868;Note=US reiteration set 1;rpt_type=direct,tandem;rpt_unit_range=143716..143730
  292. NC_001806.2 GenBank gene 143223 143697 . + 1 ID=HHV1gp00p05;Dbxref=GeneID:2703452;Name=US9;locus_tag=HHV1gp00p05
  293. NC_001806.2 GenBank mRNA 143250 143697 . + 1 ID=HHV1gp00p05.t01;Parent=HHV1gp00p05;Dbxref=GeneID:2703452;Name=US9;locus_tag=HHV1gp00p05;product=membrane protein US9
  294. NC_001806.2 GenBank regulatory 143223 143228 . + 1 Parent=HHV1gp00p05;Name=US9;locus_tag=HHV1gp00p05;regulatory_class=TATA_box
  295. NC_001806.2 GenBank CDS 143317 143589 . + 1 ID=HHV1gp00p05.p01;Parent=HHV1gp00p05.t01;Dbxref=GeneID:2703452;Name=US9;Note=type 2 membrane protein%3B tegument-associated%3B localizes envelope proteins%3B involved in axonal transport;codon_start=1;locus_tag=HHV1gp00p05;product=membrane protein US9;protein_id=YP_009137145.1;translation=length.90
  296. NC_001806.2 GenBank exon 143250 143697 . + 1 Parent=HHV1gp00p05.t01;Name=US9;locus_tag=HHV1gp00p05
  297. NC_001806.2 GenBank gene 144124 146096 . - 1 ID=HHV1gp00p04;Dbxref=GeneID:2703441;Name=US12;Note=immediate early gene;locus_tag=HHV1gp00p04
  298. NC_001806.2 GenBank mRNA 144124 146068 . - 1 ID=HHV1gp00p04.t01;Parent=HHV1gp00p04;Dbxref=GeneID:2703441;Name=US12;locus_tag=HHV1gp00p04;product=TAP transporter inhibitor ICP47
  299. NC_001806.2 GenBank regulatory 146091 146096 . - 1 Parent=HHV1gp00p04;Name=US12;locus_tag=HHV1gp00p04;regulatory_class=TATA_box
  300. NC_001806.2 GenBank CDS 145316 145582 . - 1 ID=HHV1gp00p04.p01;Parent=HHV1gp00p04.t01;Dbxref=GeneID:2703441;Name=US12;Note=inhibits antigen presentation%3B involved in immune regulation;codon_start=1;locus_tag=HHV1gp00p04;product=TAP transporter inhibitor ICP47;protein_id=YP_009137148.1;translation=length.88
  301. NC_001806.2 GenBank exon 144124 145653 . - 1 Parent=HHV1gp00p04.t01;Name=US12;locus_tag=HHV1gp00p04
  302. NC_001806.2 GenBank exon 145822 146068 . - 1 Parent=HHV1gp00p04.t01;Name=US12;locus_tag=HHV1gp00p04
  303. NC_001806.2 GenBank gene 144124 145495 . - 1 ID=HHV1gp00p03;Dbxref=GeneID:2703439;Name=US11;locus_tag=HHV1gp00p03
  304. NC_001806.2 GenBank mRNA 144124 145469 . - 1 ID=HHV1gp00p03.t01;Parent=HHV1gp00p03;Dbxref=GeneID:2703439;Name=US11;locus_tag=HHV1gp00p03;product=tegument protein US11
  305. NC_001806.2 GenBank regulatory 145490 145495 . - 1 Parent=HHV1gp00p03;Name=US11;locus_tag=HHV1gp00p03;regulatory_class=TATA_box
  306. NC_001806.2 GenBank CDS 144766 145251 . - 1 ID=HHV1gp00p03.p01;Parent=HHV1gp00p03.t01;Dbxref=GeneID:2703439;Name=US11;Note=dsRNA-binding protein%3B antagonizes PKR%3B inhibits stress-induced translational arrest%3B involved in translational regulation;codon_start=1;locus_tag=HHV1gp00p03;product=tegument protein US11;protein_id=YP_009137147.1;translation=length.161
  307. NC_001806.2 GenBank exon 144124 145469 . - 1 Parent=HHV1gp00p03.t01;Name=US11;locus_tag=HHV1gp00p03
  308. NC_001806.2 GenBank regulatory 144140 144145 . - 1 ID=GenBank:regulatory:NC_001806:144140:144145;Note=US10%2C US11%2C US12;regulatory_class=polyA_signal_sequence
  309. NC_001806.2 GenBank repeat_region 144787 145003 . + 1 ID=GenBank:repeat_region:NC_001806:144787:145003;Note=US reiteration set 2;rpt_type=direct,tandem;rpt_unit_range=144787..144795
  310. NC_001806.2 GenBank repeat_region 145590 152222 . + 1 ID=GenBank:repeat_region:NC_001806:145590:152222;Note=TRS%3B inverted repeat flanking US;rpt_type=inverted
  311. NC_001806.2 GenBank repeat_region 145681 145806 . + 1 ID=GenBank:repeat_region:NC_001806:145681:145806;Note=RS reiteration set 3;rpt_type=direct,tandem;rpt_unit_range=145681..145702
  312. NC_001806.2 GenBank stem_loop 146173 146217 . + 1 ID=GenBank:stem_loop:NC_001806:146173:146217;Note=oriS palindrome
  313. NC_001806.2 GenBank gene 144124 145198 . - 1 ID=HHV1gp00p02;Dbxref=GeneID:2703436;Name=US10;Note=alpha gene;locus_tag=HHV1gp00p02
  314. NC_001806.2 GenBank mRNA 144124 145171 . - 1 ID=HHV1gp00p02.t01;Parent=HHV1gp00p02;Dbxref=GeneID:2703436;Name=US10;locus_tag=HHV1gp00p02;product=virion protein US10
  315. NC_001806.2 GenBank regulatory 145193 145198 . - 1 Parent=HHV1gp00p02;Name=US10;locus_tag=HHV1gp00p02;regulatory_class=TATA_box
  316. NC_001806.2 GenBank CDS 144162 145100 . - 1 ID=HHV1gp00p02.p01;Parent=HHV1gp00p02.t01;Dbxref=GeneID:2703436;Name=US10;codon_start=1;locus_tag=HHV1gp00p02;product=virion protein US10;protein_id=YP_009137146.1;translation=length.312
  317. NC_001806.2 GenBank exon 144124 145171 . - 1 Parent=HHV1gp00p02.t01;Name=US10;locus_tag=HHV1gp00p02
  318. NC_001806.2 GenBank regulatory 151046 151051 . - 1 ID=GenBank:regulatory:NC_001806:151046:151051;Note=LAT;regulatory_class=polyA_signal_sequence
  319. NC_001806.2 GenBank repeat_region 151052 151384 . + 1 ID=GenBank:repeat_region:NC_001806:151052:151384;Note=RS reiteration set 2;rpt_type=direct,tandem;rpt_unit_range=151052..151068
  320. NC_001806.2 GenBank repeat_region 151486 151624 . + 1 ID=GenBank:repeat_region:NC_001806:151486:151624;Note=RS reiteration set 1;rpt_type=direct,tandem;rpt_unit_range=151486..151501
  321. NC_001806.2 GenBank repeat_region 151824 152222 . + 1 ID=GenBank:repeat_region:NC_001806:151824:152222;Note='a' sequence;rpt_type=direct,terminal
  322. NC_001806.2 GenBank repeat_region 151921 152143 . + 1 ID=GenBank:repeat_region:NC_001806:151921:152143;Note='a' sequence reiteration set;rpt_type=direct,tandem;rpt_unit_range=151921..151932
  323. NC_001806.2 GenBank gene 146737 151023 . + 1 ID=HHV1gp00p01;Dbxref=GeneID:2703391;Name=RS1;Note=alpha gene%3B immediate early gene;locus_tag=HHV1gp00p01
  324. NC_001806.2 GenBank mRNA 146766 151023 . + 1 ID=HHV1gp00p01.t01;Parent=HHV1gp00p01;Dbxref=GeneID:2703391;Name=RS1;locus_tag=HHV1gp00p01;product=transcriptional regulator ICP4
  325. NC_001806.2 GenBank regulatory 146737 146742 . + 1 Parent=HHV1gp00p01;Name=RS1;locus_tag=HHV1gp00p01;regulatory_class=TATA_box
  326. NC_001806.2 GenBank regulatory 151005 151010 . + 1 Parent=HHV1gp00p01;Name=RS1;locus_tag=HHV1gp00p01;regulatory_class=polyA_signal_sequence
  327. NC_001806.2 GenBank CDS 147066 150962 . + 1 ID=HHV1gp00p01.p01;Parent=HHV1gp00p01.t01;Dbxref=GeneID:2703391;Name=RS1;Note=involved in gene regulation%3B immediate early protein%3B transcriptional regulator;codon_start=1;locus_tag=HHV1gp00p01;product=transcriptional regulator ICP4;protein_id=YP_009137149.1;translation=length.1298
  328. NC_001806.2 GenBank exon 146766 151023 . + 1 Parent=HHV1gp00p01.t01;Name=RS1;locus_tag=HHV1gp00p01
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