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lamiastella

Cannot uninstall 'llvmlite'

lamiastella
Sep 24th, 2020
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  1. $ pip install deeplabcut==2.2b8
  2. Collecting deeplabcut==2.2b8
  3. Downloading deeplabcut-2.2b8-py3-none-any.whl (663 kB)
  4. |████████████████████████████████| 663 kB 1.6 MB/s
  5. Requirement already satisfied: python-dateutil in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2.8.1)
  6. Requirement already satisfied: ipython-genutils in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.2.0)
  7. Requirement already satisfied: statsmodels>=0.11 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.11.1)
  8. Requirement already satisfied: numpy==1.16.4 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.16.4)
  9. Requirement already satisfied: chardet in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (3.0.4)
  10. Collecting bayesian-optimization
  11. Downloading bayesian-optimization-1.2.0.tar.gz (14 kB)
  12. Requirement already satisfied: cython in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.29.21)
  13. Collecting numba==0.51.1
  14. Downloading numba-0.51.1-cp37-cp37m-manylinux2014_x86_64.whl (3.1 MB)
  15. |████████████████████████████████| 3.1 MB 6.5 MB/s
  16. Requirement already satisfied: click in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (7.1.2)
  17. Requirement already satisfied: tables in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (3.6.1)
  18. Requirement already satisfied: scikit-learn in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.23.1)
  19. Requirement already satisfied: scikit-image in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.16.2)
  20. Collecting tensorpack==0.9.8
  21. Downloading tensorpack-0.9.8-py2.py3-none-any.whl (288 kB)
  22. |████████████████████████████████| 288 kB 7.1 MB/s
  23. Requirement already satisfied: pyyaml in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (5.3.1)
  24. Requirement already satisfied: moviepy<=1.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.0.1)
  25. Requirement already satisfied: imgaug in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.4.0)
  26. Requirement already satisfied: certifi in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2020.6.20)
  27. Collecting opencv-python-headless
  28. Downloading opencv_python_headless-4.4.0.44-cp37-cp37m-manylinux2014_x86_64.whl (36.7 MB)
  29. |████████████████████████████████| 36.7 MB 52 kB/s
  30. Requirement already satisfied: easydict in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.9)
  31. Requirement already satisfied: wheel in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.34.2)
  32. Requirement already satisfied: ipython in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (7.16.1)
  33. Requirement already satisfied: tqdm in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (4.47.0)
  34. Collecting matplotlib==3.1.3
  35. Downloading matplotlib-3.1.3-cp37-cp37m-manylinux1_x86_64.whl (13.1 MB)
  36. |████████████████████████████████| 13.1 MB 130 kB/s
  37. Requirement already satisfied: patsy in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.5.1)
  38. Requirement already satisfied: six in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.15.0)
  39. Collecting filterpy
  40. Downloading filterpy-1.4.5.zip (177 kB)
  41. |████████████████████████████████| 177 kB 9.4 MB/s
  42. Requirement already satisfied: intel-openmp in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2020.0.133)
  43. Requirement already satisfied: requests in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2.24.0)
  44. Requirement already satisfied: pandas>=1.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (1.0.5)
  45. Requirement already satisfied: ruamel.yaml>=0.15.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (0.16.10)
  46. Requirement already satisfied: h5py in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (2.10.0)
  47. Requirement already satisfied: setuptools in /home/mona/anaconda3/lib/python3.7/site-packages (from deeplabcut==2.2b8) (49.2.0.post20200714)
  48. Collecting scipy>=1.4
  49. Downloading scipy-1.5.2-cp37-cp37m-manylinux1_x86_64.whl (25.9 MB)
  50. |████████████████████████████████| 25.9 MB 13 kB/s
  51. Collecting llvmlite<0.35,>=0.34.0.dev0
  52. Downloading llvmlite-0.34.0-cp37-cp37m-manylinux2010_x86_64.whl (24.6 MB)
  53. |████████████████████████████████| 24.6 MB 1.9 MB/s
  54. Requirement already satisfied: numexpr>=2.6.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from tables->deeplabcut==2.2b8) (2.7.1)
  55. Requirement already satisfied: threadpoolctl>=2.0.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-learn->deeplabcut==2.2b8) (2.1.0)
  56. Requirement already satisfied: joblib>=0.11 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-learn->deeplabcut==2.2b8) (0.16.0)
  57. Requirement already satisfied: pillow>=4.3.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (7.2.0)
  58. Requirement already satisfied: networkx>=2.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (2.4)
  59. Requirement already satisfied: imageio>=2.3.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (2.9.0)
  60. Requirement already satisfied: PyWavelets>=0.4.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from scikit-image->deeplabcut==2.2b8) (1.1.1)
  61. Requirement already satisfied: tabulate>=0.7.7 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (0.8.7)
  62. Requirement already satisfied: termcolor>=1.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (1.1.0)
  63. Requirement already satisfied: psutil>=5 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (5.7.0)
  64. Requirement already satisfied: msgpack>=0.5.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (1.0.0)
  65. Requirement already satisfied: msgpack-numpy>=0.4.4.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (0.4.6.post0)
  66. Requirement already satisfied: pyzmq>=16 in /home/mona/anaconda3/lib/python3.7/site-packages (from tensorpack==0.9.8->deeplabcut==2.2b8) (19.0.1)
  67. Requirement already satisfied: decorator<5.0,>=4.0.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from moviepy<=1.0.1->deeplabcut==2.2b8) (4.4.2)
  68. Requirement already satisfied: proglog<=1.0.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from moviepy<=1.0.1->deeplabcut==2.2b8) (0.1.9)
  69. Requirement already satisfied: imageio-ffmpeg>=0.2.0; python_version >= "3.4" in /home/mona/anaconda3/lib/python3.7/site-packages (from moviepy<=1.0.1->deeplabcut==2.2b8) (0.4.2)
  70. Requirement already satisfied: Shapely in /home/mona/anaconda3/lib/python3.7/site-packages (from imgaug->deeplabcut==2.2b8) (1.7.0)
  71. Requirement already satisfied: opencv-python in /home/mona/anaconda3/lib/python3.7/site-packages (from imgaug->deeplabcut==2.2b8) (3.4.9.33)
  72. Requirement already satisfied: pickleshare in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (0.7.5)
  73. Requirement already satisfied: pexpect; sys_platform != "win32" in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (4.8.0)
  74. Requirement already satisfied: backcall in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (0.2.0)
  75. Requirement already satisfied: traitlets>=4.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (4.3.3)
  76. Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (3.0.5)
  77. Requirement already satisfied: pygments in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (2.6.1)
  78. Requirement already satisfied: jedi>=0.10 in /home/mona/anaconda3/lib/python3.7/site-packages (from ipython->deeplabcut==2.2b8) (0.17.1)
  79. Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from matplotlib==3.1.3->deeplabcut==2.2b8) (2.4.7)
  80. Requirement already satisfied: kiwisolver>=1.0.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from matplotlib==3.1.3->deeplabcut==2.2b8) (1.2.0)
  81. Requirement already satisfied: cycler>=0.10 in /home/mona/anaconda3/lib/python3.7/site-packages (from matplotlib==3.1.3->deeplabcut==2.2b8) (0.10.0)
  82. Requirement already satisfied: idna<3,>=2.5 in /home/mona/anaconda3/lib/python3.7/site-packages (from requests->deeplabcut==2.2b8) (2.10)
  83. Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /home/mona/anaconda3/lib/python3.7/site-packages (from requests->deeplabcut==2.2b8) (1.25.9)
  84. Requirement already satisfied: pytz>=2017.2 in /home/mona/anaconda3/lib/python3.7/site-packages (from pandas>=1.0.1->deeplabcut==2.2b8) (2020.1)
  85. Requirement already satisfied: ruamel.yaml.clib>=0.1.2; platform_python_implementation == "CPython" and python_version < "3.9" in /home/mona/anaconda3/lib/python3.7/site-packages (from ruamel.yaml>=0.15.0->deeplabcut==2.2b8) (0.2.0)
  86. Requirement already satisfied: ptyprocess>=0.5 in /home/mona/anaconda3/lib/python3.7/site-packages (from pexpect; sys_platform != "win32"->ipython->deeplabcut==2.2b8) (0.6.0)
  87. Requirement already satisfied: wcwidth in /home/mona/anaconda3/lib/python3.7/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython->deeplabcut==2.2b8) (0.2.5)
  88. Requirement already satisfied: parso<0.8.0,>=0.7.0 in /home/mona/anaconda3/lib/python3.7/site-packages (from jedi>=0.10->ipython->deeplabcut==2.2b8) (0.7.0)
  89. Building wheels for collected packages: bayesian-optimization, filterpy
  90. Building wheel for bayesian-optimization (setup.py) ... done
  91. Created wheel for bayesian-optimization: filename=bayesian_optimization-1.2.0-py3-none-any.whl size=11684 sha256=6c410423c4f3130a19c09deb0f81349b8501f153b4dea28ecf62a2a41079c9cf
  92. Stored in directory: /home/mona/.cache/pip/wheels/fd/9b/71/f127d694e02eb40bcf18c7ae9613b88a6be4470f57a8528c5b
  93. Building wheel for filterpy (setup.py) ... done
  94. Created wheel for filterpy: filename=filterpy-1.4.5-py3-none-any.whl size=110449 sha256=785ee2a37bc77a137115136b57c55f8649675ea60c45255fa75853cead706d3f
  95. Stored in directory: /home/mona/.cache/pip/wheels/ce/e0/ee/a2b3c5caab3418c1ccd8c4de573d4cbe13315d7e8b0a55fbc2
  96. Successfully built bayesian-optimization filterpy
  97. Installing collected packages: scipy, bayesian-optimization, llvmlite, numba, tensorpack, opencv-python-headless, matplotlib, filterpy, deeplabcut
  98. Attempting uninstall: scipy
  99. Found existing installation: scipy 1.1.0
  100. Uninstalling scipy-1.1.0:
  101. Successfully uninstalled scipy-1.1.0
  102. Attempting uninstall: llvmlite
  103. Found existing installation: llvmlite 0.33.0+1.g022ab0f
  104. ERROR: Cannot uninstall 'llvmlite'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.
  105. (base) mona@mona:~/research/3danimals/SMALViewer$ ipython
  106. Python 3.7.6 (default, Jan 8 2020, 19:59:22)
  107. Type 'copyright', 'credits' or 'license' for more information
  108. IPython 7.16.1 -- An enhanced Interactive Python. Type '?' for help.
  109.  
  110. In [1]: import deeplabcut as dlc
  111.  
  112. In [2]: dlc.__version__
  113. Out[2]: '2.1.8.2'
  114.  
  115.  
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