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- ##Cytoscape 3 Data Import UX
- ### Scinario 1: Multiple Species Session
- =====================
- #### User Data
- * n mouse network files
- * m human network files
- * 1 expression data for mouse
- * 1 expression data for human
- ####Steps
- 1. File > Import > Network > File
- 2. Select a mouse network file and load
- 3. It creates a new (root) network
- 4. Load a second mouse network file
- 5. User will be asked to choose from the following options
- a. Add network existing network collection
- b. Create a new network collection
- 6. User should choose __a__ to add it to mouse network group
- 7. Reoeat 4-6 for n-2 times to create a mouse network collection sharing same root
- 8. Repeat the above for n networks for human
- 9. At this point, user have two network collections (root networks), one is for mouse, and the other one is for human.
- 10. File > Import > Table > File
- 11. Select the mouse expression data file and press OK
- 12. User will be asked the following:
- a. Map to selected network collection(s) - This means map to all networks under the selected roots
- b. Map to all networks
- c. Map to selected networks - User picks individual networks. Networks can exist in multiple roots
- 13. User selects __a__ and pick mouse network collection (mouse root network)
- 14. Expression data sets are mapped to all mouse networks.
- 15. Repeat 10-14 for human expression data file
- ### Questions
- * For step 12, if we have option b and c, can we cover a? User have to select all mouse networks manually, but still it gives the same result.
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