The server could not complete the request. Please contact the Galaxy Team if this error persists. "Tool toolshed.g2.bx.psu.edu/repos/iuc/umi_tools_extract/umi_tools_extract/0.4.4.0 missing. Cannot add dummy datasets."

{
    "new_history_name": "CelSeq2: NoDemulti (STAR) #10",
    "history_id": null,
    "resource_params": {},
    "replacement_params": {},
    "parameters": {
        "0": {
            "input": {
                "values": [
                    {
                        "src": "hdca",
                        "tags": [],
                        "hid": 2,
                        "id": "f6dd3b35cf7d4aea",
                        "name": "WD_DP_120218_P1"
                    }
                ],
                "batch": false
            }
        },
        "1": {
            "input": {
                "values": [
                    {
                        "src": "hda",
                        "name": "celseq_barcodes.192.raw",
                        "tags": [],
                        "keep": false,
                        "hid": 3,
                        "id": "72a57227c3533981"
                    }
                ],
                "batch": false
            }
        },
        "2": {
            "input": {
                "values": [
                    {
                        "src": "hda",
                        "name": "Danio_rerio.GRCz10.91.wChr.gtf",
                        "tags": [],
                        "keep": false,
                        "hid": 1,
                        "id": "4fe84c310b29191b"
                    }
                ],
                "batch": false
            }
        },
        "3": {
            "input_type|type": "paired_collection",
            "input_type|barcode|barcode_select": "first_read_only",
            "barcodes|use_barcodes": "yes",
            "barcodes|filter_correct": "false",
            "extract_method": "string",
            "bc_pattern": "NNNNNNCCCCCC",
            "prime3": "true",
            "print_log": "true",
            "quality|quality_selector": "false"
        },
        "4": {
            "singlePaired|sPaired": "single",
            "refGenomeSource|geneSource": "indexed",
            "refGenomeSource|GTFconditional|GTFselect": "without-gtf",
            "refGenomeSource|GTFconditional|genomeDir": "danRer10",
            "refGenomeSource|GTFconditional|sjdbOverhang": "100",
            "quantMode": "false",
            "output_params|output_select": "no",
            "params|settingsType": "default"
        },
        "5": {
            "strand_specificity": "0",
            "anno|anno_select": "history",
            "format": "tabdel_short",
            "include_feature_length_file": "false",
            "pe_parameters|fragment_counting_enabled|fragment_counting": "",
            "pe_parameters|only_both_ends": "false",
            "pe_parameters|exclude_chimerics": "true",
            "extended_parameters|gff_feature_type": "exon",
            "extended_parameters|gff_feature_attribute": "gene_id",
            "extended_parameters|summarization_level": "false",
            "extended_parameters|contribute_to_multiple_features": "false",
            "extended_parameters|multimapping_enabled|multimapping_counts": "",
            "extended_parameters|mapping_quality": "12",
            "extended_parameters|exon_exon_junction_read_counting_enabled|count_exon_exon_junction_reads": "false",
            "extended_parameters|long_reads": "false",
            "extended_parameters|by_read_group": "false",
            "extended_parameters|largest_overlap": "false",
            "extended_parameters|min_overlap": "1",
            "extended_parameters|frac_overlap": "0",
            "extended_parameters|frac_overlap_feature": "0",
            "extended_parameters|read_extension_5p": "0",
            "extended_parameters|read_extension_3p": "0",
            "extended_parameters|read_reduction": "",
            "extended_parameters|primary": "false",
            "extended_parameters|ignore_dup": "false",
            "extended_parameters|R": "true",
            "extended_parameters|count_split_alignments_only": "false"
        },
        "6": {
            "conditions_0|filters_0|bam_property|bam_property_selector": "alignmentFlag",
            "conditions_0|filters_0|bam_property|bam_property_value": "0",
            "conditions_1|filters_0|bam_property|bam_property_selector": "alignmentFlag",
            "conditions_1|filters_0|bam_property|bam_property_value": "16",
            "conditions_2|filters_0|bam_property|bam_property_selector": "tag",
            "conditions_2|filters_0|bam_property|bam_property_value": "nM:<3",
            "conditions_3|filters_0|bam_property|bam_property_selector": "tag",
            "conditions_3|filters_0|bam_property|bam_property_value": "NH:=1",
            "rule_configuration|rules_selector": "true",
            "rule_configuration|rules": "(1 | 2) & 3 & 4"
        },
        "7": {
            "sort_mode": ""
        },
        "8": {
            "paired": "false",
            "barcodes|extract_umi_method": "read_id",
            "barcodes|umi_separator": "_",
            "method": "unique",
            "edit_distance_threshold": "1",
            "wide_format_cell_counts": "true",
            "advanced|mapping_quality": "0",
            "advanced|gene_tag": "",
            "advanced|skip_tags_regex": "",
            "advanced|per_contig": "false",
            "advanced|per_cell": "true",
            "advanced|random_seed": "0"
        }
    },
    "parameters_normalized": true,
    "batch": true
}