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  1. C:\Users\Ripti\Dropbox\Peoples\CSS143\karenina>karenina -o ./test_run
  2. {'output': './test_run', 'pert_file_path': 'C:\\Users\\Ripti\\Anaconda3\\lib\\site-packages\\karenina_test-0.0.1-py3.6.egg\\data\\perturbations\\xyz_lambda_zero.csv', 'treatment_names': 'control,destabilizing_treatment', 'n_individuals': '35,35', 'n_timepoints': 10, 'perturbation_timepoint': 5, 'perturbation_duration': 100, 'interindividual_variation': 0.01, 'delta': 0.25, 'L': 0.2, 'fixed_start_pos': None}
  3. params lambda 0 update_mode replace axes x y z
  4.  
  5. Raw number of individuals from user: 35,35
  6. n_individuals.split(',') ['35', '35']
  7. **Experiment Design**
  8. treatments: ['control', 'destabilizing_treatment']
  9. n_individuals: [35, 35]
  10. interindividual_variation 0.01
  11. treatment_effects: [[], [{'start': 5, 'end': 105, 'params': {'lambda': 0.0}, 'update_mode': 'replace', 'axes': ['x', 'y', 'z']}]]
  12. individual_base_params: {'lambda': 0.2, 'delta': 0.25, 'interindividual_variation': 0.01}
  13. treatment_names: ['control', 'destabilizing_treatment']
  14. n_individuals: [35, 35]
  15. treatment_params: [[], [{'start': 5, 'end': 105, 'params': {'lambda': 0.0}, 'update_mode': 'replace', 'axes': ['x', 'y', 'z']}]]
  16. [35, 35]
  17. ['control', 'destabilizing_treatment']
  18. [[], [{'start': 5, 'end': 105, 'params': {'lambda': 0.0}, 'update_mode': 'replace', 'axes': ['x', 'y', 'z']}]]
  19. ['control', 'destabilizing_treatment']
  20. {'treatment_name': 'control', 'n_individuals': 35}
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