Raw Matrix: https://pastebin.com/Rhsct1yZ
Graphics
User defined Distance: Neighbour Joining - http://i.imgur.com/ybmlX4w.png, PCoA - http://i.imgur.com/apigunp.png
Euclidean: NJ - http://i.imgur.com/RraNMJ7.png, PCoA - http://i.imgur.com/eu67VyD.png
Euclidean may work better in this instance, as I'm not sure the ASD measure is a distance in the sense of Fst, where distance from self is 0 and other distance is relative - in these self distance is non-zero.