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misnomer001

Pandit sintashta fail (no kangju right)

misnomer001
May 21st, 2022
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  1. qpAdm: parameter file: parqpadm
  2. ### THE INPUT PARAMETERS
  3. ##PARAMETER NAME: VALUE
  4. fstatsname: fstatsa.txt
  5. popleft: left
  6. popright: right
  7. details: YES
  8. inbreed: NO
  9. ## qpAdm version: 1520
  10. seed: 1623737518
  11. inbreed set NO
  12. inbreed set NO
  13.  
  14. left pops:
  15. Kashmiri_Pandit.DG
  16. Iran_ShahrISokhta_BA2
  17. Russia_MLBA_Sintashta
  18. Irula.DG
  19.  
  20. right pops:
  21. Mbuti.DG
  22. CHG
  23. Mongolia_North_N
  24. Serbia_IronGates_Mesolithic
  25. Iran_GanjDareh_N
  26. EHG
  27. WSHG
  28. Tarim_EMBA1
  29. ONG.SG
  30. Uzbekistan_Bustan_BA
  31.  
  32. codimension 1
  33. f4info:
  34. f4rank: 2 dof: 7 chisq: 24.171 tail: 0.00106319131 dofdiff: 9 chisqdiff: -24.171 taildiff: 1
  35. B:
  36. scale 1.000 1.000
  37. CHG 0.832 0.635
  38. Mongolia_North_N -0.309 -0.177
  39. Serbia_IronGates_Mesolithic 1.820 -1.568
  40. Iran_GanjDareh_N 0.391 1.842
  41. EHG 1.517 -0.836
  42. WSHG 1.042 -0.010
  43. Tarim_EMBA1 0.775 -0.010
  44. ONG.SG -0.619 -0.555
  45. Uzbekistan_Bustan_BA 0.614 1.306
  46. A:
  47. scale 323.442 1120.258
  48. Iran_ShahrISokhta_BA2 -0.181 0.895
  49. Russia_MLBA_Sintashta 1.384 -0.636
  50. Irula.DG -1.026 -1.340
  51.  
  52.  
  53. full rank
  54. f4info:
  55. f4rank: 3 dof: 0 chisq: 0.000 tail: 1 dofdiff: 7 chisqdiff: 24.171 taildiff: 0.00106319131
  56. B:
  57. scale 896.760 225.649 307.456
  58. CHG -0.662 0.579 -1.310
  59. Mongolia_North_N 0.132 -0.264 0.374
  60. Serbia_IronGates_Mesolithic -1.601 2.038 -1.097
  61. Iran_GanjDareh_N 1.685 0.256 -0.897
  62. EHG -1.243 1.583 -1.147
  63. WSHG -0.324 1.039 -0.985
  64. Tarim_EMBA1 -0.973 0.628 -0.954
  65. ONG.SG 0.268 -0.449 0.904
  66. Uzbekistan_Bustan_BA 0.688 0.441 -1.059
  67. A:
  68. scale 1.732 1.732 1.732
  69. Iran_ShahrISokhta_BA2 1.732 0.000 0.000
  70. Russia_MLBA_Sintashta 0.000 1.732 0.000
  71. Irula.DG 0.000 0.000 1.732
  72.  
  73.  
  74. best coefficients: 0.523 0.242 0.234
  75. totmean: 0.523 0.242 0.234
  76. boot mean: 0.524 0.242 0.234
  77. std. errors: 0.055 0.023 0.047
  78.  
  79. error covariance (* 1,000,000)
  80. 3039 -659 -2380
  81. -659 528 130
  82. -2380 130 2250
  83.  
  84.  
  85. summ: Kashmiri_Pandit.DG 3 0.001063 0.524 0.242 0.234 3039 -659 -2380 528 130 ...
  86. 2250
  87.  
  88. fixed pat wt dof chisq tail prob
  89. 000 0 7 24.171 0.00106319 0.523 0.242 0.234
  90. 001 1 8 50.571 3.17435e-08 0.772 0.228 0.000
  91. 010 1 8 129.719 3.2357e-24 0.835 0.000 0.165
  92. 100 1 8 112.357 1.247e-20 0.000 0.353 0.647
  93. 011 2 9 139.529 1.2906e-25 1.000 0.000 0.000
  94. 101 2 9 1051.547 0 0.000 1.000 0.000
  95. 110 2 9 321.465 0 0.000 0.000 1.000
  96. best pat: 000 0.00106319 - -
  97. best pat: 001 3.17435e-08 chi(nested): 26.400 p-value for nested model: 2.77574e-07
  98. best pat: 011 1.2906e-25 chi(nested): 88.958 p-value for nested model: 4.03231e-21
  99.  
  100. coeffs: 0.523 0.242 0.234
  101.  
  102. ## dscore:: f_4(Base, Fit, Rbase, right2)
  103. ## genstat:: f_4(Base, Fit, right1, right2)
  104.  
  105. details: Iran_ShahrISokhta_BA2 CHG -0.000738 -1.682008
  106. details: Russia_MLBA_Sintashta CHG 0.002565 6.514899
  107. details: Irula.DG CHG -0.004261 -9.158687
  108. dscore: CHG f4: -0.000764 Z: -1.932311
  109.  
  110. details: Iran_ShahrISokhta_BA2 Mongolia_North_N 0.000148 0.378660
  111. details: Russia_MLBA_Sintashta Mongolia_North_N -0.001169 -3.282280
  112. details: Irula.DG Mongolia_North_N 0.001216 2.889128
  113. dscore: Mongolia_North_N f4: 0.000079 Z: 0.225495
  114.  
  115. details: Iran_ShahrISokhta_BA2 Serbia_IronGates_Mesolithic -0.001785 -4.752470
  116. details: Russia_MLBA_Sintashta Serbia_IronGates_Mesolithic 0.009033 25.951166
  117. details: Irula.DG Serbia_IronGates_Mesolithic -0.003567 -8.937454
  118. dscore: Serbia_IronGates_Mesolithic f4: 0.000418 Z: 1.238127
  119.  
  120. details: Iran_ShahrISokhta_BA2 Iran_GanjDareh_N 0.001879 5.166753
  121. details: Russia_MLBA_Sintashta Iran_GanjDareh_N 0.001134 3.448403
  122. details: Irula.DG Iran_GanjDareh_N -0.002919 -7.617856
  123. dscore: Iran_GanjDareh_N f4: 0.000574 Z: 1.760429
  124.  
  125. details: Iran_ShahrISokhta_BA2 EHG -0.001386 -3.216949
  126. details: Russia_MLBA_Sintashta EHG 0.007013 18.190650
  127. details: Irula.DG EHG -0.003732 -8.516765
  128. dscore: EHG f4: 0.000099 Z: 0.257924
  129.  
  130. details: Iran_ShahrISokhta_BA2 WSHG -0.000361 -0.826347
  131. details: Russia_MLBA_Sintashta WSHG 0.004605 11.124687
  132. details: Irula.DG WSHG -0.003203 -6.962734
  133. dscore: WSHG f4: 0.000176 Z: 0.445040
  134.  
  135. details: Iran_ShahrISokhta_BA2 Tarim_EMBA1 -0.001085 -2.464042
  136. details: Russia_MLBA_Sintashta Tarim_EMBA1 0.002785 6.618186
  137. details: Irula.DG Tarim_EMBA1 -0.003104 -6.394730
  138. dscore: Tarim_EMBA1 f4: -0.000621 Z: -1.524127
  139.  
  140. details: Iran_ShahrISokhta_BA2 ONG.SG 0.000299 0.768181
  141. details: Russia_MLBA_Sintashta ONG.SG -0.001989 -5.497651
  142. details: Irula.DG ONG.SG 0.002939 6.758318
  143. dscore: ONG.SG f4: 0.000364 Z: 1.020041
  144.  
  145. details: Iran_ShahrISokhta_BA2 Uzbekistan_Bustan_BA 0.000768 2.158858
  146. details: Russia_MLBA_Sintashta Uzbekistan_Bustan_BA 0.001952 6.174275
  147. details: Irula.DG Uzbekistan_Bustan_BA -0.003446 -9.290901
  148. dscore: Uzbekistan_Bustan_BA f4: 0.000067 Z: 0.212409
  149.  
  150. gendstat: Mbuti.DG CHG -1.932
  151. gendstat: Mbuti.DG Mongolia_North_N 0.225
  152. gendstat: Mbuti.DG Serbia_IronGates_Mesolithic 1.238
  153. gendstat: Mbuti.DG Iran_GanjDareh_N 1.760
  154. gendstat: Mbuti.DG EHG 0.258
  155. gendstat: Mbuti.DG WSHG 0.445
  156. gendstat: Mbuti.DG Tarim_EMBA1 -1.524
  157. gendstat: Mbuti.DG ONG.SG 1.020
  158. gendstat: Mbuti.DG Uzbekistan_Bustan_BA 0.212
  159. gendstat: CHG Mongolia_North_N 1.949
  160. gendstat: CHG Serbia_IronGates_Mesolithic 2.980
  161. gendstat: CHG Iran_GanjDareh_N 3.604
  162. gendstat: CHG EHG 1.996
  163. gendstat: CHG WSHG 2.198
  164. gendstat: CHG Tarim_EMBA1 0.323
  165. gendstat: CHG ONG.SG 2.527
  166. gendstat: CHG Uzbekistan_Bustan_BA 2.317
  167. gendstat: Mongolia_North_N Serbia_IronGates_Mesolithic 0.927
  168. gendstat: Mongolia_North_N Iran_GanjDareh_N 1.343
  169. gendstat: Mongolia_North_N EHG 0.048
  170. gendstat: Mongolia_North_N WSHG 0.246
  171. gendstat: Mongolia_North_N Tarim_EMBA1 -1.796
  172. gendstat: Mongolia_North_N ONG.SG 0.859
  173. gendstat: Mongolia_North_N Uzbekistan_Bustan_BA -0.036
  174. gendstat: Serbia_IronGates_Mesolithic Iran_GanjDareh_N 0.481
  175. gendstat: Serbia_IronGates_Mesolithic EHG -1.078
  176. gendstat: Serbia_IronGates_Mesolithic WSHG -0.718
  177. gendstat: Serbia_IronGates_Mesolithic Tarim_EMBA1 -2.794
  178. gendstat: Serbia_IronGates_Mesolithic ONG.SG -0.139
  179. gendstat: Serbia_IronGates_Mesolithic Uzbekistan_Bustan_BA -1.177
  180. gendstat: Iran_GanjDareh_N EHG -1.266
  181. gendstat: Iran_GanjDareh_N WSHG -1.028
  182. gendstat: Iran_GanjDareh_N Tarim_EMBA1 -3.020
  183. gendstat: Iran_GanjDareh_N ONG.SG -0.544
  184. gendstat: Iran_GanjDareh_N Uzbekistan_Bustan_BA -1.943
  185. gendstat: EHG WSHG 0.225
  186. gendstat: EHG Tarim_EMBA1 -2.065
  187. gendstat: EHG ONG.SG 0.627
  188. gendstat: EHG Uzbekistan_Bustan_BA -0.093
  189. gendstat: WSHG Tarim_EMBA1 -2.461
  190. gendstat: WSHG ONG.SG 0.450
  191. gendstat: WSHG Uzbekistan_Bustan_BA -0.305
  192. gendstat: Tarim_EMBA1 ONG.SG 2.430
  193. gendstat: Tarim_EMBA1 Uzbekistan_Bustan_BA 1.903
  194. gendstat: ONG.SG Uzbekistan_Bustan_BA -0.806
  195.  
  196. ##end of qpAdm: 5.410 seconds cpu 0.811 Mbytes in use
  197.  
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