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Dec 19th, 2013
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  1. MPI_Init: NumberOfProcessors = 1
  2. warning: the following parameter line was not interpreted:
  3. CRModel = 1 //Instantaneous Acceleration
  4. WARNING! Setting MetaData.PPMDiffusionParameter = 0
  5. Output to Global Dir /Users/dev/research/galaxy_particles/little_cluster
  6. magnetic field: dim 0, 0.090895 0.000000e+00
  7. magnetic field: dim 1, 0.090895 0.000000e+00
  8. magnetic field: dim 2, 0.090895 0.000000e+00
  9. CosmologySimulation: Initializing grid 0
  10. Standard Serial I/O
  11. CosmologySimulation: Initializing grid 1
  12. Standard Serial I/O
  13. CosmologySimulation: Initializing grid 2
  14. Standard Serial I/O
  15. Successfully read in parameter file 256amr_twonest.param.
  16. INITIALIZATION TIME = 2.22777128e-01
  17. Registering plugin PrintingFromPython so we have 0 plugins.
  18. Registering PrintingFromPython for Python Event
  19. Continuation Flag = 1
  20. REDSHIFT dump: dumpdirname=(/Users/dev/research/galaxy_particles/little_cluster/RD0000) == unixresult=0
  21. Continuation Flag = 1
  22. TopGrid dt = 2.449486e-02 time = 0.81651279049634 cycle = 0 z = 99
  23. TopGrid dt = 2.522969e-02 time = 0.84100765447225 cycle = 1 z = 97.048740918612
  24. yt : [INFO ] 2013-12-19 19:39:54,260 Parameters: current_time = 0.866237347377
  25. yt : [INFO ] 2013-12-19 19:39:54,260 Parameters: domain_dimensions = [64 64 64]
  26. yt : [INFO ] 2013-12-19 19:39:54,260 Parameters: domain_left_edge = [ 0. 0. 0.]
  27. yt : [INFO ] 2013-12-19 19:39:54,261 Parameters: domain_right_edge = [ 1. 1. 1.]
  28. yt : [INFO ] 2013-12-19 19:39:54,261 Parameters: cosmological_simulation = 1
  29. yt : [INFO ] 2013-12-19 19:39:54,261 Parameters: current_redshift = 95.1355559525
  30. yt : [INFO ] 2013-12-19 19:39:54,261 Parameters: omega_lambda = 0.732
  31. yt : [INFO ] 2013-12-19 19:39:54,261 Parameters: omega_matter = 0.268
  32. yt : [INFO ] 2013-12-19 19:39:54,262 Parameters: hubble_constant = 0.704
  33. yt : [INFO ] 2013-12-19 19:39:54,262 Parameters: current_time = 0.866237347377
  34. yt : [INFO ] 2013-12-19 19:39:54,262 Parameters: domain_dimensions = [64 64 64]
  35. yt : [INFO ] 2013-12-19 19:39:54,262 Parameters: domain_left_edge = [ 0. 0. 0.]
  36. yt : [INFO ] 2013-12-19 19:39:54,263 Parameters: domain_right_edge = [ 1. 1. 1.]
  37. yt : [INFO ] 2013-12-19 19:39:54,263 Parameters: cosmological_simulation = 1
  38. yt : [INFO ] 2013-12-19 19:39:54,263 Parameters: current_redshift = 95.1355559525
  39. yt : [INFO ] 2013-12-19 19:39:54,263 Parameters: omega_lambda = 0.732
  40. yt : [INFO ] 2013-12-19 19:39:54,263 Parameters: omega_matter = 0.268
  41. yt : [INFO ] 2013-12-19 19:39:54,263 Parameters: hubble_constant = 0.704
  42. yt : [INFO ] 2013-12-19 19:39:54,265 Gathering a field list (this may take a moment.)
  43. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_index to list of fields
  44. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_mass to list of fields
  45. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_position_z to list of fields
  46. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_position_x to list of fields
  47. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_position_y to list of fields
  48. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_velocity_z to list of fields
  49. yt : [INFO ] 2013-12-19 19:39:54,265 Adding unknown field particle_velocity_x to list of fields
  50. yt : [INFO ] 2013-12-19 19:39:54,266 Adding unknown field particle_velocity_y to list of fields
  51. Traceback (most recent call last):
  52. File "<string>", line 1, in <module>
  53. File "./user_script.py", line 12, in main
  54. plot = SlicePlot(pf, 'x', "Density")
  55. File "/Users/dev/yt-stable/src/yt-hg/yt/visualization/plot_window.py", line 1715, in SlicePlot
  56. return AxisAlignedSlicePlot(pf, normal, fields, *args, **kwargs)
  57. File "/Users/dev/yt-stable/src/yt-hg/yt/visualization/plot_window.py", line 880, in __init__
  58. slc.get_data(fields)
  59. File "/Users/dev/yt-stable/src/yt-hg/yt/data_objects/data_containers.py", line 566, in get_data
  60. fluids, self, self._current_chunk)
  61. File "/Users/dev/yt-stable/src/yt-hg/yt/geometry/geometry_handler.py", line 531, in _read_fluid_fields
  62. fields_to_return = self.io._read_fluid_selection(
  63. AttributeError: 'IOHandlerInMemory' object has no attribute '_read_fluid_selection'
  64. TopGrid dt = 2.598657e-02 time = 0.86623734737675 cycle = 2 z = 95.135555952548
  65. TopGrid dt = 2.676614e-02 time = 0.89222391343826 cycle = 3 z = 93.259702177077
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