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- % sudo -H pip3 install -U pip testresources setuptools numpy==1.16.1 future==0.17.1 mock==3.0.5 h5py==2.9.0 keras_preprocessing==1.0.5 keras_applications==1.0.8 gast==0.2.2 futures protobuf pybind11
- Collecting pip
- Downloading https://files.pythonhosted.org/packages/54/eb/4a3642e971f404d69d4f6fa3885559d67562801b99d7592487f1ecc4e017/pip-20.3.3-py2.py3-none-any.whl (1.5MB)
- 100% |████████████████████████████████| 1.5MB 144kB/s
- Collecting testresources
- Downloading https://files.pythonhosted.org/packages/45/4d/79a9a1f71de22fbc6c6433ac135f68d005de72fbe73e2137d2e77da9252c/testresources-2.0.1-py2.py3-none-any.whl
- Collecting setuptools
- Downloading https://files.pythonhosted.org/packages/aa/d4/0089d680a610c7b5afda26c1ae588eb363b9050ccf5f33a8c2d1164210f3/setuptools-51.1.2-py3-none-any.whl (784kB)
- 100% |████████████████████████████████| 788kB 253kB/s
- Collecting numpy==1.16.1
- Downloading https://files.pythonhosted.org/packages/2b/26/07472b0de91851b6656cbc86e2f0d5d3a3128e7580f23295ef58b6862d6c/numpy-1.16.1.zip (5.1MB)
- 100% |████████████████████████████████| 5.1MB 126kB/s
- Collecting future==0.17.1
- Downloading https://files.pythonhosted.org/packages/90/52/e20466b85000a181e1e144fd8305caf2cf475e2f9674e797b222f8105f5f/future-0.17.1.tar.gz (829kB)
- 100% |████████████████████████████████| 829kB 317kB/s
- Collecting mock==3.0.5
- Using cached https://files.pythonhosted.org/packages/05/d2/f94e68be6b17f46d2c353564da56e6fb89ef09faeeff3313a046cb810ca9/mock-3.0.5-py2.py3-none-any.whl
- Collecting h5py==2.9.0
- Downloading https://files.pythonhosted.org/packages/43/27/a6e7dcb8ae20a4dbf3725321058923fec262b6f7835179d78ccc8d98deec/h5py-2.9.0.tar.gz (287kB)
- 100% |████████████████████████████████| 296kB 773kB/s
- Collecting keras_preprocessing==1.0.5
- Using cached https://files.pythonhosted.org/packages/fc/94/74e0fa783d3fc07e41715973435dd051ca89c550881b3454233c39c73e69/Keras_Preprocessing-1.0.5-py2.py3-none-any.whl
- Collecting keras_applications==1.0.8
- Using cached https://files.pythonhosted.org/packages/71/e3/19762fdfc62877ae9102edf6342d71b28fbfd9dea3d2f96a882ce099b03f/Keras_Applications-1.0.8-py3-none-any.whl
- Collecting gast==0.2.2
- Using cached https://files.pythonhosted.org/packages/4e/35/11749bf99b2d4e3cceb4d55ca22590b0d7c2c62b9de38ac4a4a7f4687421/gast-0.2.2.tar.gz
- Collecting futures
- Using cached https://files.pythonhosted.org/packages/05/80/f41cca0ea1ff69bce7e7a7d76182b47bb4e1a494380a532af3e8ee70b9ec/futures-3.1.1-py3-none-any.whl
- Collecting protobuf
- Downloading https://files.pythonhosted.org/packages/81/d4/a8a31a326ee60e295e5d7477d93d8f6ceee98246c1a7381afc817a91d893/protobuf-3.14.0-py2.py3-none-any.whl (173kB)
- 100% |████████████████████████████████| 174kB 854kB/s
- Collecting pybind11
- Using cached https://files.pythonhosted.org/packages/00/84/fc9dc13ee536ba5e6b8fd10ce368fea5b738fe394c3b296cde7c9b144a92/pybind11-2.6.1-py2.py3-none-any.whl
- Collecting pbr>=1.8 (from testresources)
- Downloading https://files.pythonhosted.org/packages/fb/48/69046506f6ac61c1eaa9a0d42d22d54673b69e176d30ca98e3f61513e980/pbr-5.5.1-py2.py3-none-any.whl (106kB)
- 100% |████████████████████████████████| 112kB 1.0MB/s
- Collecting six (from mock==3.0.5)
- Downloading https://files.pythonhosted.org/packages/ee/ff/48bde5c0f013094d729fe4b0316ba2a24774b3ff1c52d924a8a4cb04078a/six-1.15.0-py2.py3-none-any.whl
- Building wheels for collected packages: numpy, future, h5py, gast
- Running setup.py bdist_wheel for numpy ... done
- Stored in directory: /root/.cache/pip/wheels/04/64/e1/283a3672c2865608968594c02a6923311f44d033bcece2683b
- Running setup.py bdist_wheel for future ... done
- Stored in directory: /root/.cache/pip/wheels/0c/61/d2/d6b7317325828fbb39ee6ad559dbe4664d0896da4721bf379e
- Running setup.py bdist_wheel for h5py ... error
- Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-o7lr1871/h5py/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/tmp5d7ddx7spip-wheel- --python-tag cp36:
- running bdist_wheel
- running build
- running build_py
- creating build
- creating build/lib.linux-aarch64-3.6
- creating build/lib.linux-aarch64-3.6/h5py
- copying h5py/h5py_warnings.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/version.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/ipy_completer.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/__init__.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/highlevel.py -> build/lib.linux-aarch64-3.6/h5py
- creating build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/vds.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/selections.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/compat.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/dataset.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/selections2.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/group.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/dims.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/__init__.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/base.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/filters.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/files.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/attrs.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/datatype.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- creating build/lib.linux-aarch64-3.6/h5py/tests
- copying h5py/tests/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests
- copying h5py/tests/common.py -> build/lib.linux-aarch64-3.6/h5py/tests
- creating build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_dataset.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_datatype.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_base.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_file_image.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_selections.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_slicing.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_attrs.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5f.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_attrs_data.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5p.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_objects.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5t.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_group.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5d_direct_chunk_write.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_file.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_dimension_scales.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- creating build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_datatype.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_attribute_create.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_filters.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_dataset_getitem.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_deprecation.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_dataset_swmr.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_threads.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_dims_dimensionproxy.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_file.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- creating build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/test_highlevel_vds.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/test_lowlevel_vds.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/test_virtual_source.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- running build_ext
- Autodetected HDF5 1.10.0
- ********************************************************************************
- Summary of the h5py configuration
- Path to HDF5: None
- HDF5 Version: '1.10.0'
- MPI Enabled: False
- Rebuild Required: True
- ********************************************************************************
- Executing api_gen rebuild of defs
- Executing cythonize()
- [ 1/22] Cythonizing /tmp/pip-build-o7lr1871/h5py/h5py/_conv.pyx
- /tmp/pip-build-o7lr1871/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Compiler/Main.py:344: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-build-o7lr1871/h5py/h5py/_conv.pxd
- tree = Parsing.p_module(s, pxd, full_module_name)
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # Copyright 2008-2013 Andrew Collette and contributors
- #
- # License: Standard 3-clause BSD; see "license.txt" for full license terms
- # and contributor agreement.
- from defs cimport *
- ^
- ------------------------------------------------------------
- h5py/_conv.pxd:10:0: 'defs.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/Reference.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/RegionReference.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/hobj_ref_t.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/hdset_reg_ref_t.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/H5PY_OBJ.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/typewrap.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/py_create.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/TypeID.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- PyTypeObject PyArray_Type
- object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
- ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
- ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:61:9: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- PyTypeObject PyArray_Type
- object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
- ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
- ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:61:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- PyTypeObject PyArray_Type
- object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
- ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
- ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:61:46: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:30: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:58: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, conv_operator_t op,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:74:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, conv_operator_t op,
- init_operator_t initop, H5T_bkg_t need_bkg) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:75:44: 'H5T_bkg_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ctypedef struct conv_size_t:
- size_t src_size
- size_t dst_size
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:145:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ctypedef struct conv_size_t:
- size_t src_size
- size_t dst_size
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:145:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ctypedef struct conv_size_t:
- size_t src_size
- size_t dst_size
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:145:36: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- Py_XDECREF(temp_encoded)
- # =============================================================================
- # VLEN to fixed-width strings
- cdef herr_t init_vlen2fixed(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:273:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- Py_XDECREF(temp_encoded)
- # =============================================================================
- # VLEN to fixed-width strings
- cdef herr_t init_vlen2fixed(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:273:28: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- Py_XDECREF(temp_encoded)
- # =============================================================================
- # VLEN to fixed-width strings
- cdef herr_t init_vlen2fixed(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:273:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- sizes[0].src_size = H5Tget_size(src)
- sizes[0].dst_size = H5Tget_size(dst)
- return 0
- cdef herr_t init_fixed2vlen(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:287:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- sizes[0].src_size = H5Tget_size(src)
- sizes[0].dst_size = H5Tget_size(dst)
- return 0
- cdef herr_t init_fixed2vlen(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:287:28: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- sizes[0].src_size = H5Tget_size(src)
- sizes[0].dst_size = H5Tget_size(dst)
- return 0
- cdef herr_t init_fixed2vlen(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:287:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:442:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:448:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:23: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:37: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:51: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:454:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:23: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:37: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:51: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:460:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:466:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:472:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:478:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:484:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct conv_enum_t:
- size_t src_size
- size_t dst_size
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:495:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct conv_enum_t:
- size_t src_size
- size_t dst_size
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:495:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct conv_enum_t:
- size_t src_size
- size_t dst_size
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- H5T_cdata_t *cdata, int forward) except -1 with gil:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:496:33: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = H5T_BKG_NO
- cdata[0].priv = info = <conv_enum_t*>malloc(sizeof(conv_enum_t))
- info[0].src_size = H5Tget_size(src)
- info[0].dst_size = H5Tget_size(dst)
- cdef void enum_int_converter_free(H5T_cdata_t *cdata):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:504:34: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:512:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:512:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:512:55: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, int forward) except -1 with gil:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:514:46: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:31: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:42: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, int forward) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:579:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:598:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:604:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:613:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct vlen_t:
- size_t len
- void* ptr
- cdef int conv_vlen2ndarray(void* ipt, void* opt, np.dtype elem_dtype,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:677:8: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct vlen_t:
- size_t len
- void* ptr
- cdef int conv_vlen2ndarray(void* ipt, void* opt, np.dtype elem_dtype,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:677:23: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:711:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_ndarray2vlen(void* ipt, void* opt,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:780:8: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_ndarray2vlen(void* ipt, void* opt,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:780:23: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 references to Python instances of h5r.Reference
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:349:9: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- cdef Reference ref = Reference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:351:9: 'Reference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2objref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:368:9: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>opt
- cdef object obj
- cdef Reference ref
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:371:9: 'Reference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_regref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:392:9: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- cdef RegionReference ref = RegionReference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:394:9: 'RegionReference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2regref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:416:9: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>opt
- cdef object obj
- cdef RegionReference ref
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:419:9: 'RegionReference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef size_t nalloc
- cdef int i
- cdef char* cbuf = NULL
- cdef char* buf = <char*>buf_i
- cdef int identical
- cdef hid_t supertype = -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:521:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:617:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- cdef TypeID outtype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:618:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:715:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- cdef TypeID outtype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:716:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:811:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- cdef hid_t vlentype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:812:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:813:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:814:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int i
- cdef char* buf = <char*>buf_i
- cdef char* bkg = <char*>bkg_i
- if command == H5T_CONV_INIT:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:84:18: undeclared name not builtin: H5T_CONV_INIT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* bkg = <char*>bkg_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = need_bkg
- return initop(src_id, dst_id, &(cdata[0].priv))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:87:38: Cannot take address of Python object attribute 'priv'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = need_bkg
- return initop(src_id, dst_id, &(cdata[0].priv))
- elif command == H5T_CONV_FREE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:89:20: undeclared name not builtin: H5T_CONV_FREE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = need_bkg
- return initop(src_id, dst_id, &(cdata[0].priv))
- elif command == H5T_CONV_FREE:
- free(cdata[0].priv)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:91:8: undeclared name not builtin: free
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return initop(src_id, dst_id, &(cdata[0].priv))
- elif command == H5T_CONV_FREE:
- free(cdata[0].priv)
- cdata[0].priv = NULL
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:92:24: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_FREE:
- free(cdata[0].priv)
- cdata[0].priv = NULL
- elif command == H5T_CONV_CONV:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:94:20: undeclared name not builtin: H5T_CONV_CONV
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- sizes = <conv_size_t*>cdata[0].priv
- if H5Tis_variable_str(src_id):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:98:11: undeclared name not builtin: H5Tis_variable_str
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- sizes = <conv_size_t*>cdata[0].priv
- if H5Tis_variable_str(src_id):
- sizes.cset = H5Tget_cset(src_id)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:99:25: undeclared name not builtin: H5Tget_cset
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if sizes[0].src_size >= sizes[0].dst_size:
- for i from 0<=i<nl:
- op( buf + (i*sizes[0].src_size), # input pointer
- buf + (i*sizes[0].dst_size), # output pointer
- bkg + (i*bkg_stride), # backing buffer
- cdata[0].priv) # conversion context
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:116:32: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- else:
- for i from nl>i>=0:
- op( buf + (i*sizes[0].src_size),
- buf + (i*sizes[0].dst_size),
- bkg + (i*bkg_stride),
- cdata[0].priv)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:122:32: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # offsets exclusively.
- for i from 0<=i<nl:
- op( buf + (i*buf_stride),
- buf + (i*buf_stride), # note this is the same!
- bkg + (i*bkg_stride),
- cdata[0].priv)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:131:28: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:148:26: undeclared name not builtin: malloc
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:148:12: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:148:12: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- priv[0] = sizes
- sizes[0].src_size = H5Tget_size(src)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:150:24: undeclared name not builtin: H5Tget_size
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* temp_obj = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:168:4: undeclared name not builtin: memcpy
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* temp_obj = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:168:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* temp_obj = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:168:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- memcpy(&buf_cstring0, buf_cstring, sizeof(buf_cstring0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:169:11: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- memcpy(&buf_cstring0, buf_cstring, sizeof(buf_cstring0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:169:26: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- memcpy(&buf_cstring0, buf_cstring, sizeof(buf_cstring0))
- # When reading we identify H5T_CSET_ASCII as a byte string and
- # H5T_CSET_UTF8 as a utf8-encoded unicode string
- if sizes.cset == H5T_CSET_ASCII:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:173:21: undeclared name not builtin: H5T_CSET_ASCII
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if sizes.cset == H5T_CSET_ASCII:
- if buf_cstring0 == NULL:
- temp_obj = PyBytes_FromString("")
- else:
- temp_obj = PyBytes_FromString(buf_cstring0)
- elif sizes.cset == H5T_CSET_UTF8:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:178:23: undeclared name not builtin: H5T_CSET_UTF8
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_obj = PyBytes_FromString(buf_cstring0)
- elif sizes.cset == H5T_CSET_UTF8:
- if buf_cstring0 == NULL:
- temp_obj = PyUnicode_DecodeUTF8("", 0, NULL)
- else:
- temp_obj = PyUnicode_DecodeUTF8(buf_cstring0, strlen(buf_cstring0), NULL)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:182:58: undeclared name not builtin: strlen
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 will eventually overwrite this target location, so we
- # make sure to decref the object there.
- Py_XDECREF(bkg_obj0)
- # Write the new string object to the buffer in-place
- memcpy(buf_obj, &temp_obj, sizeof(temp_obj));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:193:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 will eventually overwrite this target location, so we
- # make sure to decref the object there.
- Py_XDECREF(bkg_obj0)
- # Write the new string object to the buffer in-place
- memcpy(buf_obj, &temp_obj, sizeof(temp_obj));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:193:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef size_t temp_string_len = 0 # Not including null term
- cdef PyObject* buf_obj0
- cdef char* buf_cstring0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:212:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef size_t temp_string_len = 0 # Not including null term
- cdef PyObject* buf_obj0
- cdef char* buf_cstring0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:212:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- raise TypeError("Unrecognized dataset encoding")
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:261:23: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- raise TypeError("Unrecognized dataset encoding")
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:261:23: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- memcpy(buf_cstring0, temp_string, temp_string_len+1)
- memcpy(buf_cstring, &buf_cstring0, sizeof(buf_cstring0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:263:15: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- memcpy(buf_cstring0, temp_string, temp_string_len+1)
- memcpy(buf_cstring, &buf_cstring0, sizeof(buf_cstring0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:263:28: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(src) and (not H5Tis_variable_str(dst))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:280:12: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(src) and (not H5Tis_variable_str(dst))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:280:12: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(dst) and (not H5Tis_variable_str(src))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:294:12: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(dst) and (not H5Tis_variable_str(src))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:294:12: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* temp_string = NULL
- cdef size_t temp_string_len = 0 # Without null term
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef char* buf_vlen0
- memcpy(&buf_vlen0, buf_vlen, sizeof(buf_vlen0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:310:11: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* temp_string = NULL
- cdef size_t temp_string_len = 0 # Without null term
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef char* buf_vlen0
- memcpy(&buf_vlen0, buf_vlen, sizeof(buf_vlen0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:310:23: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_string_len = strlen(temp_string)
- if temp_string_len <= sizes[0].dst_size:
- # Pad with zeros
- memcpy(buf_fixed, temp_string, temp_string_len)
- memset(buf_fixed + temp_string_len, c'\0', sizes[0].dst_size - temp_string_len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:319:12: undeclared name not builtin: memset
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char** buf_vlen = <char**>opt
- cdef char* buf_fixed = <char*>ipt
- cdef char* temp_string = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- temp_string = <char*>malloc(sizes[0].src_size+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:335:18: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char** buf_vlen = <char**>opt
- cdef char* buf_fixed = <char*>ipt
- cdef char* temp_string = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- temp_string = <char*>malloc(sizes[0].src_size+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:335:18: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_string = <char*>malloc(sizes[0].src_size+1)
- memcpy(temp_string, buf_fixed, sizes[0].src_size)
- temp_string[sizes[0].src_size] = c'\0'
- memcpy(buf_vlen, &temp_string, sizeof(temp_string));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:339:11: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_string = <char*>malloc(sizes[0].src_size+1)
- memcpy(temp_string, buf_fixed, sizes[0].src_size)
- temp_string[sizes[0].src_size] = c'\0'
- memcpy(buf_vlen, &temp_string, sizeof(temp_string));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:339:21: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 references to Python instances of h5r.Reference
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:349:32: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- cdef Reference ref = Reference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:351:25: 'Reference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- cdef Reference ref = Reference()
- cdef PyObject* ref_ptr = NULL
- memcpy(&ref.ref.obj_ref, buf_ref, sizeof(ref.ref.obj_ref))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:354:11: Cannot take address of Python object attribute 'obj_ref'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef Reference ref = Reference()
- cdef PyObject* ref_ptr = NULL
- memcpy(&ref.ref.obj_ref, buf_ref, sizeof(ref.ref.obj_ref))
- ref.typecode = H5R_OBJECT
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:355:19: undeclared name not builtin: H5R_OBJECT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:361:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:361:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2objref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:368:32: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef Reference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:375:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef Reference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:375:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, Reference):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:379:31: 'Reference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, Reference):
- raise TypeError("Can't convert incompatible object to HDF5 object reference")
- ref = <Reference>(buf_obj0)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:381:15: 'Reference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, Reference):
- raise TypeError("Can't convert incompatible object to HDF5 object reference")
- ref = <Reference>(buf_obj0)
- memcpy(buf_ref, &ref.ref.obj_ref, sizeof(ref.ref.obj_ref))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:382:24: Cannot take address of Python object attribute 'obj_ref'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if not isinstance(obj, Reference):
- raise TypeError("Can't convert incompatible object to HDF5 object reference")
- ref = <Reference>(buf_obj0)
- memcpy(buf_ref, &ref.ref.obj_ref, sizeof(ref.ref.obj_ref))
- else:
- memset(buf_ref, c'\0', sizeof(hobj_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:384:48: 'hobj_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_regref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:392:37: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- cdef RegionReference ref = RegionReference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:394:31: 'RegionReference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef RegionReference ref = RegionReference()
- cdef PyObject* ref_ptr = NULL
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:399:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef RegionReference ref = RegionReference()
- cdef PyObject* ref_ptr = NULL
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:399:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* ref_ptr = NULL
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- memcpy(ref.ref.reg_ref, buf_ref, sizeof(hdset_reg_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:400:59: 'hdset_reg_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- memcpy(ref.ref.reg_ref, buf_ref, sizeof(hdset_reg_ref_t))
- ref.typecode = H5R_DATASET_REGION
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:402:19: undeclared name not builtin: H5R_DATASET_REGION
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- Py_XDECREF(bkg_obj0)
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:409:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- Py_XDECREF(bkg_obj0)
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:409:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2regref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:416:37: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef RegionReference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:423:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef RegionReference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:423:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, RegionReference):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:427:31: 'RegionReference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, RegionReference):
- raise TypeError("Can't convert incompatible object to HDF5 region reference")
- ref = <RegionReference>(buf_obj0)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:429:15: 'RegionReference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, RegionReference):
- raise TypeError("Can't convert incompatible object to HDF5 region reference")
- ref = <RegionReference>(buf_obj0)
- memcpy(buf_ref, ref.ref.reg_ref, sizeof(hdset_reg_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:430:63: 'hdset_reg_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if not isinstance(obj, RegionReference):
- raise TypeError("Can't convert incompatible object to HDF5 region reference")
- ref = <RegionReference>(buf_obj0)
- memcpy(buf_ref, ref.ref.reg_ref, sizeof(hdset_reg_ref_t))
- else:
- memset(buf_ref, c'\0', sizeof(hdset_reg_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:432:53: 'hdset_reg_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:444:63: undeclared name not builtin: H5T_BKG_YES
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:450:62: undeclared name not builtin: H5T_BKG_NO
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- H5T_cdata_t *cdata, int forward) except -1 with gil:
- cdef conv_enum_t *info
- cdata[0].need_bkg = H5T_BKG_NO
- cdata[0].priv = info = <conv_enum_t*>malloc(sizeof(conv_enum_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:500:27: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- H5T_cdata_t *cdata, int forward) except -1 with gil:
- cdef conv_enum_t *info
- cdata[0].need_bkg = H5T_BKG_NO
- cdata[0].priv = info = <conv_enum_t*>malloc(sizeof(conv_enum_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:500:27: Cannot convert 'conv_enum_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void enum_int_converter_free(H5T_cdata_t *cdata):
- cdef conv_enum_t *info
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:508:9: Cannot convert 'conv_enum_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void enum_int_converter_free(H5T_cdata_t *cdata):
- cdef conv_enum_t *info
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:509:20: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- try:
- if forward:
- supertype = H5Tget_super(src)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:527:24: undeclared name not builtin: H5Tget_super
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- try:
- if forward:
- supertype = H5Tget_super(src)
- identical = H5Tequal(supertype, dst)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:528:24: undeclared name not builtin: H5Tequal
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- if buf_stride == 0:
- # Contiguous case: call H5Tconvert directly
- if forward:
- H5Tconvert(supertype, dst, nl, buf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:540:16: undeclared name not builtin: H5Tconvert
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- if buf_stride == 0:
- # Contiguous case: call H5Tconvert directly
- if forward:
- H5Tconvert(supertype, dst, nl, buf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:540:52: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_stride == 0:
- # Contiguous case: call H5Tconvert directly
- if forward:
- H5Tconvert(supertype, dst, nl, buf, NULL, dxpl)
- else:
- H5Tconvert(src, supertype, nl, buf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:542:52: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if info[0].src_size > info[0].dst_size:
- nalloc = info[0].src_size*nl
- else:
- nalloc = info[0].dst_size*nl
- cbuf = <char*>malloc(nalloc)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:550:19: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if info[0].src_size > info[0].dst_size:
- nalloc = info[0].src_size*nl
- else:
- nalloc = info[0].dst_size*nl
- cbuf = <char*>malloc(nalloc)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:550:19: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- for i from 0<=i<nl:
- memcpy(cbuf + (i*info[0].src_size), buf + (i*buf_stride),
- info[0].src_size)
- if forward:
- H5Tconvert(supertype, dst, nl, cbuf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:559:53: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info[0].src_size)
- if forward:
- H5Tconvert(supertype, dst, nl, cbuf, NULL, dxpl)
- else:
- H5Tconvert(src, supertype, nl, cbuf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:561:53: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- finally:
- free(cbuf)
- cbuf = NULL
- if supertype > 0:
- H5Tclose(supertype)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:571:12: undeclared name not builtin: H5Tclose
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:627:11: undeclared name not builtin: H5Tget_class
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:627:35: undeclared name not builtin: H5T_VLEN
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:627:71: undeclared name not builtin: H5T_OPAQUE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pass
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- supertype = typewrap(H5Tget_super(src_id))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:637:20: 'typewrap' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- supertype = typewrap(H5Tget_super(src_id))
- dt = supertype.dtype
- outtype = py_create(dt)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:639:18: 'py_create' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef PyObject* ndarray_obj
- cdef vlen_t in_vlen0
- memcpy(&in_vlen0, in_vlen, sizeof(in_vlen0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:688:11: Cannot convert 'vlen_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef PyObject* ndarray_obj
- cdef vlen_t in_vlen0
- memcpy(&in_vlen0, in_vlen, sizeof(in_vlen0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:688:22: Cannot convert 'vlen_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- dims[0] = in_vlen0.len
- data = in_vlen0.ptr
- if outtype.get_size() > intype.get_size():
- data = realloc(data, outtype.get_size() * in_vlen0.len)
- H5Tconvert(intype.id, outtype.id, in_vlen0.len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:694:64: undeclared name not builtin: H5P_DEFAULT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- dims[0] = in_vlen0.len
- data = in_vlen0.ptr
- if outtype.get_size() > intype.get_size():
- data = realloc(data, outtype.get_size() * in_vlen0.len)
- H5Tconvert(intype.id, outtype.id, in_vlen0.len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:694:52: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- dims[0] = in_vlen0.len
- data = in_vlen0.ptr
- if outtype.get_size() > intype.get_size():
- data = realloc(data, outtype.get_size() * in_vlen0.len)
- H5Tconvert(intype.id, outtype.id, in_vlen0.len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:694:58: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ndarray_obj = <PyObject*>ndarray
- Py_INCREF(ndarray_obj)
- # Write the new object to the buffer in-place
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:705:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ndarray_obj = <PyObject*>ndarray
- Py_INCREF(ndarray_obj)
- # Write the new object to the buffer in-place
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:705:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:727:32: 'H5PY_OBJ' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:729:20: 'typewrap' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- for i from 0 <= i < nl:
- memcpy(&pdata_elem, pdata+i, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:731:19: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- for i from 0 <= i < nl:
- memcpy(&pdata_elem, pdata+i, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:731:37: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- for i from 0 <= i < nl:
- memcpy(&pdata_elem, pdata+i, sizeof(pdata_elem))
- if supertype != py_create((<np.ndarray> pdata_elem).dtype, 1):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:732:28: 'py_create' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pass
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:744:15: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pass
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:744:28: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- supertype = py_create((<np.ndarray> pdata_elem).dtype)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:745:20: 'py_create' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- supertype = py_create((<np.ndarray> pdata_elem).dtype)
- outtype = typewrap(H5Tget_super(dst_id))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:746:18: 'typewrap' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef size_t len
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:791:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef size_t len
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:791:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ndarray = <np.ndarray> buf_obj0
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:796:21: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ndarray = <np.ndarray> buf_obj0
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:796:21: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:798:21: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:798:21: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:799:11: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:800:43: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:800:49: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:802:11: Cannot convert 'size_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:802:28: Cannot convert 'size_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- memcpy(&in_vlen[0].ptr, &data, sizeof(data))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:803:11: Cannot convert 'void **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- memcpy(&in_vlen[0].ptr, &data, sizeof(data))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:803:28: Cannot convert 'void **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:816:15: undeclared name not builtin: H5Tcopy
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:816:23: undeclared name not builtin: H5T_C_S1
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:817:4: undeclared name not builtin: H5Tset_size
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:817:26: undeclared name not builtin: H5T_VARIABLE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- enum = H5Tenum_create(H5T_STD_I32LE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:819:11: undeclared name not builtin: H5Tenum_create
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- enum = H5Tenum_create(H5T_STD_I32LE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:819:26: undeclared name not builtin: H5T_STD_I32LE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- enum = H5Tenum_create(H5T_STD_I32LE)
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:821:15: undeclared name not builtin: H5Tvlen_create
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- enum = H5Tenum_create(H5T_STD_I32LE)
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:823:12: 'H5PY_OBJ' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:825:4: undeclared name not builtin: H5Tregister
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:825:16: undeclared name not builtin: H5T_PERS_HARD
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:825:60: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:826:60: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:828:16: undeclared name not builtin: H5T_PERS_SOFT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:828:65: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:829:65: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:831:47: undeclared name not builtin: H5T_STD_REF_OBJ
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:831:71: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:832:71: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:834:47: undeclared name not builtin: H5T_STD_REF_DSETREG
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:834:75: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:835:75: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:837:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:838:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
- H5Tregister(H5T_PERS_SOFT, "vlen2ndarray", vlentype, pyobj, vlen2ndarray)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:840:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
- H5Tregister(H5T_PERS_SOFT, "vlen2ndarray", vlentype, pyobj, vlen2ndarray)
- H5Tregister(H5T_PERS_SOFT, "ndarray2vlen", pyobj, vlentype, ndarray2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:841:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:851:4: undeclared name not builtin: H5Tunregister
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:851:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:852:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:854:55: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:855:55: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:857:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:858:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:860:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:861:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:863:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:864:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:866:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
- H5Tunregister(H5T_PERS_SOFT, "ndarray2vlen", -1, -1, ndarray2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:867:57: Cannot convert '<error>' to Python object
- Traceback (most recent call last):
- File "<string>", line 1, in <module>
- File "/tmp/pip-build-o7lr1871/h5py/setup.py", line 168, in <module>
- cmdclass = CMDCLASS,
- File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 129, in setup
- return distutils.core.setup(**attrs)
- File "/usr/lib/python3.6/distutils/core.py", line 148, in setup
- dist.run_commands()
- File "/usr/lib/python3.6/distutils/dist.py", line 955, in run_commands
- self.run_command(cmd)
- File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
- cmd_obj.run()
- File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 204, in run
- self.run_command('build')
- File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
- self.distribution.run_command(command)
- File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
- cmd_obj.run()
- File "/usr/lib/python3.6/distutils/command/build.py", line 135, in run
- self.run_command(cmd_name)
- File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
- self.distribution.run_command(command)
- File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
- cmd_obj.run()
- File "/tmp/pip-build-o7lr1871/h5py/setup_build.py", line 203, in run
- force=config.rebuild_required or self.force)
- File "/tmp/pip-build-o7lr1871/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Build/Dependencies.py", line 1110, in cythonize
- cythonize_one(*args)
- File "/tmp/pip-build-o7lr1871/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Build/Dependencies.py", line 1277, in cythonize_one
- raise CompileError(None, pyx_file)
- Cython.Compiler.Errors.CompileError: /tmp/pip-build-o7lr1871/h5py/h5py/_conv.pyx
- ----------------------------------------
- Failed building wheel for h5py
- Running setup.py clean for h5py
- Running setup.py bdist_wheel for gast ... done
- Stored in directory: /root/.cache/pip/wheels/5c/2e/7e/a1d4d4fcebe6c381f378ce7743a3ced3699feb89bcfbdadadd
- Successfully built numpy future gast
- Failed to build h5py
- Installing collected packages: pip, pbr, testresources, setuptools, numpy, future, six, mock, h5py, keras-preprocessing, keras-applications, gast, futures, protobuf, pybind11
- Found existing installation: pip 9.0.1
- Not uninstalling pip at /usr/lib/python3/dist-packages, outside environment /usr
- Found existing installation: setuptools 39.0.1
- Not uninstalling setuptools at /usr/lib/python3/dist-packages, outside environment /usr
- Found existing installation: numpy 1.13.3
- Not uninstalling numpy at /usr/lib/python3/dist-packages, outside environment /usr
- Found existing installation: six 1.11.0
- Not uninstalling six at /usr/lib/python3/dist-packages, outside environment /usr
- Running setup.py install for h5py ... error
- Complete output from command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-o7lr1871/h5py/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-k47zbxhu-record/install-record.txt --single-version-externally-managed --compile:
- running install
- running build
- running build_py
- creating build
- creating build/lib.linux-aarch64-3.6
- creating build/lib.linux-aarch64-3.6/h5py
- copying h5py/h5py_warnings.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/version.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/ipy_completer.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/__init__.py -> build/lib.linux-aarch64-3.6/h5py
- copying h5py/highlevel.py -> build/lib.linux-aarch64-3.6/h5py
- creating build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/vds.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/selections.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/compat.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/dataset.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/selections2.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/group.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/dims.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/__init__.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/base.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/filters.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/files.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/attrs.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- copying h5py/_hl/datatype.py -> build/lib.linux-aarch64-3.6/h5py/_hl
- creating build/lib.linux-aarch64-3.6/h5py/tests
- copying h5py/tests/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests
- copying h5py/tests/common.py -> build/lib.linux-aarch64-3.6/h5py/tests
- creating build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_dataset.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_datatype.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_base.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_file_image.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_selections.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_slicing.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_attrs.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5f.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_attrs_data.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5p.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_objects.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5t.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_group.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_h5d_direct_chunk_write.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_file.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- copying h5py/tests/old/test_dimension_scales.py -> build/lib.linux-aarch64-3.6/h5py/tests/old
- creating build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_datatype.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_attribute_create.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_filters.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_dataset_getitem.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_deprecation.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_dataset_swmr.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_threads.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_dims_dimensionproxy.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- copying h5py/tests/hl/test_file.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl
- creating build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/test_highlevel_vds.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/__init__.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/test_lowlevel_vds.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- copying h5py/tests/hl/test_vds/test_virtual_source.py -> build/lib.linux-aarch64-3.6/h5py/tests/hl/test_vds
- running build_ext
- Autodetected HDF5 1.10.0
- ********************************************************************************
- Summary of the h5py configuration
- Path to HDF5: None
- HDF5 Version: '1.10.0'
- MPI Enabled: False
- Rebuild Required: True
- ********************************************************************************
- Executing cythonize()
- [ 1/22] Cythonizing /tmp/pip-build-o7lr1871/h5py/h5py/_conv.pyx
- /tmp/pip-build-o7lr1871/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Compiler/Main.py:344: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-build-o7lr1871/h5py/h5py/_conv.pxd
- tree = Parsing.p_module(s, pxd, full_module_name)
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # Copyright 2008-2013 Andrew Collette and contributors
- #
- # License: Standard 3-clause BSD; see "license.txt" for full license terms
- # and contributor agreement.
- from defs cimport *
- ^
- ------------------------------------------------------------
- h5py/_conv.pxd:10:0: 'defs.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/Reference.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/RegionReference.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/hobj_ref_t.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:16:0: 'h5r/hdset_reg_ref_t.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/H5PY_OBJ.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/typewrap.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/py_create.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- """
- Low-level type-conversion routines.
- """
- from h5r cimport Reference, RegionReference, hobj_ref_t, hdset_reg_ref_t
- from h5t cimport H5PY_OBJ, typewrap, py_create, TypeID
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:17:0: 'h5t/TypeID.pxd' not found
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- PyTypeObject PyArray_Type
- object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
- ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
- ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:61:9: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- PyTypeObject PyArray_Type
- object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
- ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
- ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:61:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- PyTypeObject PyArray_Type
- object PyArray_NewFromDescr(PyTypeObject* subtype, np.dtype descr, int nd, np.npy_intp* dims, np.npy_intp* strides, void* data, int flags, object obj)
- ctypedef int (*conv_operator_t)(void* ipt, void* opt, void* bkg, void* priv) except -1
- ctypedef herr_t (*init_operator_t)(hid_t src, hid_t dst, void** priv) except -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:61:46: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:30: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # repeat all the conversion boilerplate for every single callback.
- #
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:72:58: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # While this is somewhat slower than a custom function, the added overhead is
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, conv_operator_t op,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:74:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # likely small compared to the cost of the Python-side API calls required to
- # implement the conversions.
- cdef herr_t generic_converter(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, conv_operator_t op,
- init_operator_t initop, H5T_bkg_t need_bkg) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:75:44: 'H5T_bkg_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ctypedef struct conv_size_t:
- size_t src_size
- size_t dst_size
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:145:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ctypedef struct conv_size_t:
- size_t src_size
- size_t dst_size
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:145:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ctypedef struct conv_size_t:
- size_t src_size
- size_t dst_size
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:145:36: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- Py_XDECREF(temp_encoded)
- # =============================================================================
- # VLEN to fixed-width strings
- cdef herr_t init_vlen2fixed(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:273:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- Py_XDECREF(temp_encoded)
- # =============================================================================
- # VLEN to fixed-width strings
- cdef herr_t init_vlen2fixed(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:273:28: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- Py_XDECREF(temp_encoded)
- # =============================================================================
- # VLEN to fixed-width strings
- cdef herr_t init_vlen2fixed(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:273:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- sizes[0].src_size = H5Tget_size(src)
- sizes[0].dst_size = H5Tget_size(dst)
- return 0
- cdef herr_t init_fixed2vlen(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:287:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- sizes[0].src_size = H5Tget_size(src)
- sizes[0].dst_size = H5Tget_size(dst)
- return 0
- cdef herr_t init_fixed2vlen(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:287:28: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- sizes[0].src_size = H5Tget_size(src)
- sizes[0].dst_size = H5Tget_size(dst)
- return 0
- cdef herr_t init_fixed2vlen(hid_t src, hid_t dst, void** priv) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:287:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:440:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # Conversion functions
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:442:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:446:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:448:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:23: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:37: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:452:51: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- cdef herr_t vlen2fixed(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:454:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:23: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:37: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:458:51: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2fixed, init_vlen2fixed, H5T_BKG_NO)
- cdef herr_t fixed2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:460:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:464:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_fixed2vlen, init_fixed2vlen, H5T_BKG_NO)
- cdef herr_t objref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:466:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:470:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_objref2pyref, init_generic, H5T_BKG_NO)
- cdef herr_t pyref2objref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:472:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:476:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_pyref2objref, init_generic, H5T_BKG_NO)
- cdef herr_t regref2pyref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:478:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:482:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_regref2pyref, init_generic, H5T_BKG_YES)
- cdef herr_t pyref2regref(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:484:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct conv_enum_t:
- size_t src_size
- size_t dst_size
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:495:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct conv_enum_t:
- size_t src_size
- size_t dst_size
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:495:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct conv_enum_t:
- size_t src_size
- size_t dst_size
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- H5T_cdata_t *cdata, int forward) except -1 with gil:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:496:33: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = H5T_BKG_NO
- cdata[0].priv = info = <conv_enum_t*>malloc(sizeof(conv_enum_t))
- info[0].src_size = H5Tget_size(src)
- info[0].dst_size = H5Tget_size(dst)
- cdef void enum_int_converter_free(H5T_cdata_t *cdata):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:504:34: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:512:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:512:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:512:55: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].priv = NULL
- cdef int enum_int_converter_conv(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, int forward) except -1 with gil:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:514:46: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:31: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:42: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:577:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # Direction ("forward"): 1 = enum to int, 0 = int to enum
- cdef herr_t enum_int_converter(hid_t src, hid_t dst, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl, int forward) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:579:44: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return -2
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:596:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef herr_t enum2int(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:598:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:21: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:35: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:602:49: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return enum_int_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, 1)
- cdef herr_t int2enum(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:604:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- buf_i, bkg_i, dxpl, 0)
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:611:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- # ndarray to VLEN routines
- cdef herr_t vlen2ndarray(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:613:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct vlen_t:
- size_t len
- void* ptr
- cdef int conv_vlen2ndarray(void* ipt, void* opt, np.dtype elem_dtype,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:677:8: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef struct vlen_t:
- size_t len
- void* ptr
- cdef int conv_vlen2ndarray(void* ipt, void* opt, np.dtype elem_dtype,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:677:23: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:5: 'herr_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:25: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:39: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:709:53: 'H5T_cdata_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef herr_t ndarray2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:711:33: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_ndarray2vlen(void* ipt, void* opt,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:780:8: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_ndarray2vlen(void* ipt, void* opt,
- TypeID intype, TypeID outtype) except -1:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:780:23: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 references to Python instances of h5r.Reference
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:349:9: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- cdef Reference ref = Reference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:351:9: 'Reference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2objref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:368:9: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>opt
- cdef object obj
- cdef Reference ref
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:371:9: 'Reference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_regref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:392:9: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- cdef RegionReference ref = RegionReference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:394:9: 'RegionReference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2regref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:416:9: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>opt
- cdef object obj
- cdef RegionReference ref
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:419:9: 'RegionReference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef size_t nalloc
- cdef int i
- cdef char* cbuf = NULL
- cdef char* buf = <char*>buf_i
- cdef int identical
- cdef hid_t supertype = -1
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:521:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:617:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- cdef TypeID outtype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:618:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:715:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- void *bkg_i, hid_t dxpl) except -1:
- cdef int command = cdata[0].command
- cdef size_t src_size, dst_size
- cdef TypeID supertype
- cdef TypeID outtype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:716:9: 'TypeID' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:811:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # =============================================================================
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- cdef hid_t vlentype
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:812:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:813:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cpdef int register_converters() except -1:
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:814:9: 'hid_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int i
- cdef char* buf = <char*>buf_i
- cdef char* bkg = <char*>bkg_i
- if command == H5T_CONV_INIT:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:84:18: undeclared name not builtin: H5T_CONV_INIT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* bkg = <char*>bkg_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = need_bkg
- return initop(src_id, dst_id, &(cdata[0].priv))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:87:38: Cannot take address of Python object attribute 'priv'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = need_bkg
- return initop(src_id, dst_id, &(cdata[0].priv))
- elif command == H5T_CONV_FREE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:89:20: undeclared name not builtin: H5T_CONV_FREE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = need_bkg
- return initop(src_id, dst_id, &(cdata[0].priv))
- elif command == H5T_CONV_FREE:
- free(cdata[0].priv)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:91:8: undeclared name not builtin: free
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return initop(src_id, dst_id, &(cdata[0].priv))
- elif command == H5T_CONV_FREE:
- free(cdata[0].priv)
- cdata[0].priv = NULL
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:92:24: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_FREE:
- free(cdata[0].priv)
- cdata[0].priv = NULL
- elif command == H5T_CONV_CONV:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:94:20: undeclared name not builtin: H5T_CONV_CONV
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- sizes = <conv_size_t*>cdata[0].priv
- if H5Tis_variable_str(src_id):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:98:11: undeclared name not builtin: H5Tis_variable_str
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- sizes = <conv_size_t*>cdata[0].priv
- if H5Tis_variable_str(src_id):
- sizes.cset = H5Tget_cset(src_id)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:99:25: undeclared name not builtin: H5Tget_cset
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if sizes[0].src_size >= sizes[0].dst_size:
- for i from 0<=i<nl:
- op( buf + (i*sizes[0].src_size), # input pointer
- buf + (i*sizes[0].dst_size), # output pointer
- bkg + (i*bkg_stride), # backing buffer
- cdata[0].priv) # conversion context
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:116:32: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- else:
- for i from nl>i>=0:
- op( buf + (i*sizes[0].src_size),
- buf + (i*sizes[0].dst_size),
- bkg + (i*bkg_stride),
- cdata[0].priv)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:122:32: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # offsets exclusively.
- for i from 0<=i<nl:
- op( buf + (i*buf_stride),
- buf + (i*buf_stride), # note this is the same!
- bkg + (i*bkg_stride),
- cdata[0].priv)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:131:28: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:148:26: undeclared name not builtin: malloc
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:148:12: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- int cset
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:148:12: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef herr_t init_generic(hid_t src, hid_t dst, void** priv) except -1:
- cdef conv_size_t *sizes
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- priv[0] = sizes
- sizes[0].src_size = H5Tget_size(src)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:150:24: undeclared name not builtin: H5Tget_size
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* temp_obj = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:168:4: undeclared name not builtin: memcpy
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* temp_obj = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:168:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* temp_obj = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:168:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- memcpy(&buf_cstring0, buf_cstring, sizeof(buf_cstring0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:169:11: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef PyObject* bkg_obj0
- cdef char* buf_cstring0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- memcpy(&buf_cstring0, buf_cstring, sizeof(buf_cstring0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:169:26: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0))
- memcpy(&buf_cstring0, buf_cstring, sizeof(buf_cstring0))
- # When reading we identify H5T_CSET_ASCII as a byte string and
- # H5T_CSET_UTF8 as a utf8-encoded unicode string
- if sizes.cset == H5T_CSET_ASCII:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:173:21: undeclared name not builtin: H5T_CSET_ASCII
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if sizes.cset == H5T_CSET_ASCII:
- if buf_cstring0 == NULL:
- temp_obj = PyBytes_FromString("")
- else:
- temp_obj = PyBytes_FromString(buf_cstring0)
- elif sizes.cset == H5T_CSET_UTF8:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:178:23: undeclared name not builtin: H5T_CSET_UTF8
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_obj = PyBytes_FromString(buf_cstring0)
- elif sizes.cset == H5T_CSET_UTF8:
- if buf_cstring0 == NULL:
- temp_obj = PyUnicode_DecodeUTF8("", 0, NULL)
- else:
- temp_obj = PyUnicode_DecodeUTF8(buf_cstring0, strlen(buf_cstring0), NULL)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:182:58: undeclared name not builtin: strlen
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 will eventually overwrite this target location, so we
- # make sure to decref the object there.
- Py_XDECREF(bkg_obj0)
- # Write the new string object to the buffer in-place
- memcpy(buf_obj, &temp_obj, sizeof(temp_obj));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:193:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 will eventually overwrite this target location, so we
- # make sure to decref the object there.
- Py_XDECREF(bkg_obj0)
- # Write the new string object to the buffer in-place
- memcpy(buf_obj, &temp_obj, sizeof(temp_obj));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:193:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef size_t temp_string_len = 0 # Not including null term
- cdef PyObject* buf_obj0
- cdef char* buf_cstring0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:212:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef size_t temp_string_len = 0 # Not including null term
- cdef PyObject* buf_obj0
- cdef char* buf_cstring0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:212:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- raise TypeError("Unrecognized dataset encoding")
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:261:23: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- raise TypeError("Unrecognized dataset encoding")
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:261:23: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- memcpy(buf_cstring0, temp_string, temp_string_len+1)
- memcpy(buf_cstring, &buf_cstring0, sizeof(buf_cstring0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:263:15: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if strlen(temp_string) != temp_string_len:
- raise ValueError("VLEN strings do not support embedded NULLs")
- buf_cstring0 = <char*>malloc(temp_string_len+1)
- memcpy(buf_cstring0, temp_string, temp_string_len+1)
- memcpy(buf_cstring, &buf_cstring0, sizeof(buf_cstring0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:263:28: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(src) and (not H5Tis_variable_str(dst))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:280:12: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(src) and (not H5Tis_variable_str(dst))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:280:12: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(dst) and (not H5Tis_variable_str(src))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:294:12: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef conv_size_t *sizes
- if not (H5Tis_variable_str(dst) and (not H5Tis_variable_str(src))):
- return -2
- sizes = <conv_size_t*>malloc(sizeof(conv_size_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:294:12: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* temp_string = NULL
- cdef size_t temp_string_len = 0 # Without null term
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef char* buf_vlen0
- memcpy(&buf_vlen0, buf_vlen, sizeof(buf_vlen0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:310:11: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* temp_string = NULL
- cdef size_t temp_string_len = 0 # Without null term
- cdef conv_size_t *sizes = <conv_size_t*>priv
- cdef char* buf_vlen0
- memcpy(&buf_vlen0, buf_vlen, sizeof(buf_vlen0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:310:23: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_string_len = strlen(temp_string)
- if temp_string_len <= sizes[0].dst_size:
- # Pad with zeros
- memcpy(buf_fixed, temp_string, temp_string_len)
- memset(buf_fixed + temp_string_len, c'\0', sizes[0].dst_size - temp_string_len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:319:12: undeclared name not builtin: memset
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char** buf_vlen = <char**>opt
- cdef char* buf_fixed = <char*>ipt
- cdef char* temp_string = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- temp_string = <char*>malloc(sizes[0].src_size+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:335:18: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char** buf_vlen = <char**>opt
- cdef char* buf_fixed = <char*>ipt
- cdef char* temp_string = NULL
- cdef conv_size_t *sizes = <conv_size_t*>priv
- temp_string = <char*>malloc(sizes[0].src_size+1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:335:18: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_string = <char*>malloc(sizes[0].src_size+1)
- memcpy(temp_string, buf_fixed, sizes[0].src_size)
- temp_string[sizes[0].src_size] = c'\0'
- memcpy(buf_vlen, &temp_string, sizeof(temp_string));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:339:11: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- temp_string = <char*>malloc(sizes[0].src_size+1)
- memcpy(temp_string, buf_fixed, sizes[0].src_size)
- temp_string[sizes[0].src_size] = c'\0'
- memcpy(buf_vlen, &temp_string, sizeof(temp_string));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:339:21: Cannot convert 'char **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- # HDF5 references to Python instances of h5r.Reference
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:349:32: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_objref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- cdef Reference ref = Reference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:351:25: 'Reference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>ipt
- cdef Reference ref = Reference()
- cdef PyObject* ref_ptr = NULL
- memcpy(&ref.ref.obj_ref, buf_ref, sizeof(ref.ref.obj_ref))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:354:11: Cannot take address of Python object attribute 'obj_ref'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef Reference ref = Reference()
- cdef PyObject* ref_ptr = NULL
- memcpy(&ref.ref.obj_ref, buf_ref, sizeof(ref.ref.obj_ref))
- ref.typecode = H5R_OBJECT
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:355:19: undeclared name not builtin: H5R_OBJECT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:361:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:361:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2objref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hobj_ref_t* buf_ref = <hobj_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:368:32: 'hobj_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef Reference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:375:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef Reference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:375:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, Reference):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:379:31: 'Reference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, Reference):
- raise TypeError("Can't convert incompatible object to HDF5 object reference")
- ref = <Reference>(buf_obj0)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:381:15: 'Reference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, Reference):
- raise TypeError("Can't convert incompatible object to HDF5 object reference")
- ref = <Reference>(buf_obj0)
- memcpy(buf_ref, &ref.ref.obj_ref, sizeof(ref.ref.obj_ref))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:382:24: Cannot take address of Python object attribute 'obj_ref'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if not isinstance(obj, Reference):
- raise TypeError("Can't convert incompatible object to HDF5 object reference")
- ref = <Reference>(buf_obj0)
- memcpy(buf_ref, &ref.ref.obj_ref, sizeof(ref.ref.obj_ref))
- else:
- memset(buf_ref, c'\0', sizeof(hobj_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:384:48: 'hobj_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int conv_regref2pyref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:392:37: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject** buf_obj = <PyObject**>opt
- cdef PyObject** bkg_obj = <PyObject**>bkg
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>ipt
- cdef RegionReference ref = RegionReference()
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:394:31: 'RegionReference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef RegionReference ref = RegionReference()
- cdef PyObject* ref_ptr = NULL
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:399:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef RegionReference ref = RegionReference()
- cdef PyObject* ref_ptr = NULL
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:399:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* ref_ptr = NULL
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- memcpy(ref.ref.reg_ref, buf_ref, sizeof(hdset_reg_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:400:59: 'hdset_reg_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef PyObject* bkg_obj0
- memcpy(&bkg_obj0, bkg_obj, sizeof(bkg_obj0));
- memcpy(ref.ref.reg_ref, buf_ref, sizeof(hdset_reg_ref_t))
- ref.typecode = H5R_DATASET_REGION
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:402:19: undeclared name not builtin: H5R_DATASET_REGION
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- Py_XDECREF(bkg_obj0)
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:409:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ref_ptr = <PyObject*>ref
- Py_INCREF(ref_ptr) # because Cython discards its reference when the
- # function exits
- Py_XDECREF(bkg_obj0)
- memcpy(buf_obj, &ref_ptr, sizeof(ref_ptr))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:409:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cdef int conv_pyref2regref(void* ipt, void* opt, void* bkg, void* priv) except -1:
- cdef PyObject** buf_obj = <PyObject**>ipt
- cdef hdset_reg_ref_t* buf_ref = <hdset_reg_ref_t*>opt
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:416:37: 'hdset_reg_ref_t' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef RegionReference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:423:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef object obj
- cdef RegionReference ref
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:423:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0));
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, RegionReference):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:427:31: 'RegionReference' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, RegionReference):
- raise TypeError("Can't convert incompatible object to HDF5 region reference")
- ref = <RegionReference>(buf_obj0)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:429:15: 'RegionReference' is not a type identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_obj0 != NULL and buf_obj0 != Py_None:
- obj = <object>(buf_obj0)
- if not isinstance(obj, RegionReference):
- raise TypeError("Can't convert incompatible object to HDF5 region reference")
- ref = <RegionReference>(buf_obj0)
- memcpy(buf_ref, ref.ref.reg_ref, sizeof(hdset_reg_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:430:63: 'hdset_reg_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if not isinstance(obj, RegionReference):
- raise TypeError("Can't convert incompatible object to HDF5 region reference")
- ref = <RegionReference>(buf_obj0)
- memcpy(buf_ref, ref.ref.reg_ref, sizeof(hdset_reg_ref_t))
- else:
- memset(buf_ref, c'\0', sizeof(hdset_reg_ref_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:432:53: 'hdset_reg_ref_t' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef herr_t vlen2str(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_vlen2str, init_generic, H5T_BKG_YES)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:444:63: undeclared name not builtin: H5T_BKG_YES
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef herr_t str2vlen(hid_t src_id, hid_t dst_id, H5T_cdata_t *cdata,
- size_t nl, size_t buf_stride, size_t bkg_stride, void *buf_i,
- void *bkg_i, hid_t dxpl) except -1:
- return generic_converter(src_id, dst_id, cdata, nl, buf_stride, bkg_stride,
- buf_i, bkg_i, dxpl, conv_str2vlen, init_generic, H5T_BKG_NO)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:450:62: undeclared name not builtin: H5T_BKG_NO
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- H5T_cdata_t *cdata, int forward) except -1 with gil:
- cdef conv_enum_t *info
- cdata[0].need_bkg = H5T_BKG_NO
- cdata[0].priv = info = <conv_enum_t*>malloc(sizeof(conv_enum_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:500:27: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef int enum_int_converter_init(hid_t src, hid_t dst,
- H5T_cdata_t *cdata, int forward) except -1 with gil:
- cdef conv_enum_t *info
- cdata[0].need_bkg = H5T_BKG_NO
- cdata[0].priv = info = <conv_enum_t*>malloc(sizeof(conv_enum_t))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:500:27: Cannot convert 'conv_enum_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void enum_int_converter_free(H5T_cdata_t *cdata):
- cdef conv_enum_t *info
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:508:9: Cannot convert 'conv_enum_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void enum_int_converter_free(H5T_cdata_t *cdata):
- cdef conv_enum_t *info
- info = <conv_enum_t*>cdata[0].priv
- free(info)
- cdata[0].priv = NULL
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:509:20: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- try:
- if forward:
- supertype = H5Tget_super(src)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:527:24: undeclared name not builtin: H5Tget_super
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info = <conv_enum_t*>cdata[0].priv
- try:
- if forward:
- supertype = H5Tget_super(src)
- identical = H5Tequal(supertype, dst)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:528:24: undeclared name not builtin: H5Tequal
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- if buf_stride == 0:
- # Contiguous case: call H5Tconvert directly
- if forward:
- H5Tconvert(supertype, dst, nl, buf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:540:16: undeclared name not builtin: H5Tconvert
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- if buf_stride == 0:
- # Contiguous case: call H5Tconvert directly
- if forward:
- H5Tconvert(supertype, dst, nl, buf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:540:52: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if buf_stride == 0:
- # Contiguous case: call H5Tconvert directly
- if forward:
- H5Tconvert(supertype, dst, nl, buf, NULL, dxpl)
- else:
- H5Tconvert(src, supertype, nl, buf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:542:52: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if info[0].src_size > info[0].dst_size:
- nalloc = info[0].src_size*nl
- else:
- nalloc = info[0].dst_size*nl
- cbuf = <char*>malloc(nalloc)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:550:19: Casting temporary Python object to non-numeric non-Python type
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if info[0].src_size > info[0].dst_size:
- nalloc = info[0].src_size*nl
- else:
- nalloc = info[0].dst_size*nl
- cbuf = <char*>malloc(nalloc)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:550:19: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- for i from 0<=i<nl:
- memcpy(cbuf + (i*info[0].src_size), buf + (i*buf_stride),
- info[0].src_size)
- if forward:
- H5Tconvert(supertype, dst, nl, cbuf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:559:53: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- info[0].src_size)
- if forward:
- H5Tconvert(supertype, dst, nl, cbuf, NULL, dxpl)
- else:
- H5Tconvert(src, supertype, nl, cbuf, NULL, dxpl)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:561:53: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- finally:
- free(cbuf)
- cbuf = NULL
- if supertype > 0:
- H5Tclose(supertype)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:571:12: undeclared name not builtin: H5Tclose
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:627:11: undeclared name not builtin: H5Tget_class
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:627:35: undeclared name not builtin: H5T_VLEN
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if H5Tget_class(src_id) != H5T_VLEN or H5Tget_class(dst_id) != H5T_OPAQUE:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:627:71: undeclared name not builtin: H5T_OPAQUE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pass
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- supertype = typewrap(H5Tget_super(src_id))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:637:20: 'typewrap' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- supertype = typewrap(H5Tget_super(src_id))
- dt = supertype.dtype
- outtype = py_create(dt)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:639:18: 'py_create' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef PyObject* ndarray_obj
- cdef vlen_t in_vlen0
- memcpy(&in_vlen0, in_vlen, sizeof(in_vlen0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:688:11: Cannot convert 'vlen_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef PyObject* ndarray_obj
- cdef vlen_t in_vlen0
- memcpy(&in_vlen0, in_vlen, sizeof(in_vlen0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:688:22: Cannot convert 'vlen_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- dims[0] = in_vlen0.len
- data = in_vlen0.ptr
- if outtype.get_size() > intype.get_size():
- data = realloc(data, outtype.get_size() * in_vlen0.len)
- H5Tconvert(intype.id, outtype.id, in_vlen0.len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:694:64: undeclared name not builtin: H5P_DEFAULT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- dims[0] = in_vlen0.len
- data = in_vlen0.ptr
- if outtype.get_size() > intype.get_size():
- data = realloc(data, outtype.get_size() * in_vlen0.len)
- H5Tconvert(intype.id, outtype.id, in_vlen0.len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:694:52: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- dims[0] = in_vlen0.len
- data = in_vlen0.ptr
- if outtype.get_size() > intype.get_size():
- data = realloc(data, outtype.get_size() * in_vlen0.len)
- H5Tconvert(intype.id, outtype.id, in_vlen0.len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:694:58: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ndarray_obj = <PyObject*>ndarray
- Py_INCREF(ndarray_obj)
- # Write the new object to the buffer in-place
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:705:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- ndarray_obj = <PyObject*>ndarray
- Py_INCREF(ndarray_obj)
- # Write the new object to the buffer in-place
- in_vlen0.ptr = NULL
- memcpy(buf_obj, &ndarray_obj, sizeof(ndarray_obj))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:705:20: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef char* buf = <char*>buf_i
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:727:32: 'H5PY_OBJ' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if command == H5T_CONV_INIT:
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:729:20: 'typewrap' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- for i from 0 <= i < nl:
- memcpy(&pdata_elem, pdata+i, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:731:19: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdata[0].need_bkg = H5T_BKG_NO
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- for i from 0 <= i < nl:
- memcpy(&pdata_elem, pdata+i, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:731:37: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if not H5Tequal(src_id, H5PY_OBJ) or H5Tget_class(dst_id) != H5T_VLEN:
- return -2
- supertype = typewrap(H5Tget_super(dst_id))
- for i from 0 <= i < nl:
- memcpy(&pdata_elem, pdata+i, sizeof(pdata_elem))
- if supertype != py_create((<np.ndarray> pdata_elem).dtype, 1):
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:732:28: 'py_create' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pass
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:744:15: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pass
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:744:28: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- supertype = py_create((<np.ndarray> pdata_elem).dtype)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:745:20: 'py_create' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- elif command == H5T_CONV_CONV:
- # need to pass element dtype to converter
- memcpy(&pdata_elem, pdata, sizeof(pdata_elem))
- supertype = py_create((<np.ndarray> pdata_elem).dtype)
- outtype = typewrap(H5Tget_super(dst_id))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:746:18: 'typewrap' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef size_t len
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:791:11: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef void* data
- cdef np.ndarray ndarray
- cdef size_t len
- cdef PyObject* buf_obj0
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:791:22: Cannot convert 'PyObject **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ndarray = <np.ndarray> buf_obj0
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:796:21: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- memcpy(&buf_obj0, buf_obj, sizeof(buf_obj0))
- ndarray = <np.ndarray> buf_obj0
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:796:21: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:798:21: Cannot convert Python object to 'void *'
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- len = ndarray.shape[0]
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:798:21: Storing unsafe C derivative of temporary Python reference
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:799:11: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:800:43: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- if outtype.get_size() > intype.get_size():
- data = malloc(outtype.get_size() * len)
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:800:49: Cannot convert 'void *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:802:11: Cannot convert 'size_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- else:
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:802:28: Cannot convert 'size_t *' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- memcpy(&in_vlen[0].ptr, &data, sizeof(data))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:803:11: Cannot convert 'void **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- data = malloc(intype.get_size() * len)
- memcpy(data, ndarray.data, intype.get_size() * len)
- H5Tconvert(intype.id, outtype.id, len, data, NULL, H5P_DEFAULT)
- memcpy(&in_vlen[0].len, &len, sizeof(len))
- memcpy(&in_vlen[0].ptr, &data, sizeof(data))
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:803:28: Cannot convert 'void **' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:816:15: undeclared name not builtin: H5Tcopy
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlstring
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:816:23: undeclared name not builtin: H5T_C_S1
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:817:4: undeclared name not builtin: H5Tset_size
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t vlentype
- cdef hid_t pyobj
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:817:26: undeclared name not builtin: H5T_VARIABLE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- enum = H5Tenum_create(H5T_STD_I32LE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:819:11: undeclared name not builtin: H5Tenum_create
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cdef hid_t enum
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- enum = H5Tenum_create(H5T_STD_I32LE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:819:26: undeclared name not builtin: H5T_STD_I32LE
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlstring = H5Tcopy(H5T_C_S1)
- H5Tset_size(vlstring, H5T_VARIABLE)
- enum = H5Tenum_create(H5T_STD_I32LE)
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:821:15: undeclared name not builtin: H5Tvlen_create
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- enum = H5Tenum_create(H5T_STD_I32LE)
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:823:12: 'H5PY_OBJ' is not a constant, variable or function identifier
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:825:4: undeclared name not builtin: H5Tregister
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:825:16: undeclared name not builtin: H5T_PERS_HARD
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:825:60: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- vlentype = H5Tvlen_create(H5T_STD_I32LE)
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:826:60: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:828:16: undeclared name not builtin: H5T_PERS_SOFT
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- pyobj = H5PY_OBJ
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:828:65: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "vlen2str", vlstring, pyobj, vlen2str)
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:829:65: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:831:47: undeclared name not builtin: H5T_STD_REF_OBJ
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "str2vlen", pyobj, vlstring, str2vlen)
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:831:71: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "vlen2fixed", vlstring, H5T_C_S1, vlen2fixed)
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:832:71: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:834:47: undeclared name not builtin: H5T_STD_REF_DSETREG
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "fixed2vlen", H5T_C_S1, vlstring, fixed2vlen)
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:834:75: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "objref2pyref", H5T_STD_REF_OBJ, pyobj, objref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:835:75: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "pyref2objref", pyobj, H5T_STD_REF_OBJ, pyref2objref)
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:837:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "regref2pyref", H5T_STD_REF_DSETREG, pyobj, regref2pyref)
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:838:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_HARD, "pyref2regref", pyobj, H5T_STD_REF_DSETREG, pyref2regref)
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
- H5Tregister(H5T_PERS_SOFT, "vlen2ndarray", vlentype, pyobj, vlen2ndarray)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:840:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tregister(H5T_PERS_SOFT, "enum2int", enum, H5T_STD_I32LE, enum2int)
- H5Tregister(H5T_PERS_SOFT, "int2enum", H5T_STD_I32LE, enum, int2enum)
- H5Tregister(H5T_PERS_SOFT, "vlen2ndarray", vlentype, pyobj, vlen2ndarray)
- H5Tregister(H5T_PERS_SOFT, "ndarray2vlen", pyobj, vlentype, ndarray2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:841:64: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:851:4: undeclared name not builtin: H5Tunregister
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:851:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- return 0
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:852:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- cpdef int unregister_converters() except -1:
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:854:55: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "vlen2str", -1, -1, vlen2str)
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:855:55: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "str2vlen", -1, -1, str2vlen)
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:857:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_SOFT, "vlen2fixed", -1, -1, vlen2fixed)
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:858:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_SOFT, "fixed2vlen", -1, -1, fixed2vlen)
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:860:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "objref2pyref", -1, -1, objref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:861:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "pyref2objref", -1, -1, pyref2objref)
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:863:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "regref2pyref", -1, -1, regref2pyref)
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:864:53: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_HARD, "pyref2regref", -1, -1, pyref2regref)
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:866:57: Cannot convert '<error>' to Python object
- Error compiling Cython file:
- ------------------------------------------------------------
- ...
- H5Tunregister(H5T_PERS_SOFT, "enum2int", -1, -1, enum2int)
- H5Tunregister(H5T_PERS_SOFT, "int2enum", -1, -1, int2enum)
- H5Tunregister(H5T_PERS_SOFT, "vlen2ndarray", -1, -1, vlen2ndarray)
- H5Tunregister(H5T_PERS_SOFT, "ndarray2vlen", -1, -1, ndarray2vlen)
- ^
- ------------------------------------------------------------
- h5py/_conv.pyx:867:57: Cannot convert '<error>' to Python object
- Traceback (most recent call last):
- File "<string>", line 1, in <module>
- File "/tmp/pip-build-o7lr1871/h5py/setup.py", line 168, in <module>
- cmdclass = CMDCLASS,
- File "/usr/local/lib/python3.6/dist-packages/setuptools/__init__.py", line 153, in setup
- return distutils.core.setup(**attrs)
- File "/usr/lib/python3.6/distutils/core.py", line 148, in setup
- dist.run_commands()
- File "/usr/lib/python3.6/distutils/dist.py", line 955, in run_commands
- self.run_command(cmd)
- File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
- cmd_obj.run()
- File "/usr/local/lib/python3.6/dist-packages/setuptools/command/install.py", line 61, in run
- return orig.install.run(self)
- File "/usr/lib/python3.6/distutils/command/install.py", line 589, in run
- self.run_command('build')
- File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
- self.distribution.run_command(command)
- File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
- cmd_obj.run()
- File "/usr/lib/python3.6/distutils/command/build.py", line 135, in run
- self.run_command(cmd_name)
- File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
- self.distribution.run_command(command)
- File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
- cmd_obj.run()
- File "/tmp/pip-build-o7lr1871/h5py/setup_build.py", line 203, in run
- force=config.rebuild_required or self.force)
- File "/tmp/pip-build-o7lr1871/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Build/Dependencies.py", line 1110, in cythonize
- cythonize_one(*args)
- File "/tmp/pip-build-o7lr1871/h5py/.eggs/Cython-3.0a6-py3.6.egg/Cython/Build/Dependencies.py", line 1277, in cythonize_one
- raise CompileError(None, pyx_file)
- Cython.Compiler.Errors.CompileError: /tmp/pip-build-o7lr1871/h5py/h5py/_conv.pyx
- ----------------------------------------
- Command "/usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-o7lr1871/h5py/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /tmp/pip-k47zbxhu-record/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-build-o7lr1871/h5py/
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